Metagenome / Metatranscriptome Family F047777

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047777
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	39 residues
Representative Sequence	RIDPLNVALRLWTVSADIKAGERTVFRARQQIDLAKAYS
Number of Associated Samples	86
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.36 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	91.28 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.940 % of family members)
Environment Ontology (ENVO)	Unclassified (53.691 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.443 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.25% β-sheet: 0.00% Coil/Unstructured: 50.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF13340	DUF4096	4.03
PF03237	Terminase_6N	2.68
PF01740	STAS	2.01
PF13358	DDE_3	2.01
PF02738	MoCoBD_1	2.01
PF08530	PepX_C	1.34
PF00216	Bac_DNA_binding	1.34
PF04321	RmlD_sub_bind	1.34
PF01402	RHH_1	1.34
PF12802	MarR_2	1.34
PF05199	GMC_oxred_C	0.67
PF01464	SLT	0.67
PF14384	BrnA_antitoxin	0.67
PF01048	PNP_UDP_1	0.67
PF10082	BBP2_2	0.67
PF01850	PIN	0.67
PF13551	HTH_29	0.67
PF07589	PEP-CTERM	0.67
PF12762	DDE_Tnp_IS1595	0.67
PF16859	TetR_C_11	0.67
PF13683	rve_3	0.67
PF07883	Cupin_2	0.67
PF01977	UbiD	0.67
PF00483	NTP_transferase	0.67
PF13466	STAS_2	0.67
PF00665	rve	0.67
PF08483	Obsolete Pfam Family	0.67
PF13586	DDE_Tnp_1_2	0.67
PF04542	Sigma70_r2	0.67
PF13011	LZ_Tnp_IS481	0.67
PF06147	DUF968	0.67
PF08281	Sigma70_r4_2	0.67
PF00293	NUDIX	0.67
PF01557	FAA_hydrolase	0.67
PF04255	DUF433	0.67
PF04365	BrnT_toxin	0.67
PF14252	DUF4347	0.67
PF02585	PIG-L	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	2.68
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	2.68
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	2.68
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.34
COG2936	Predicted acyl esterase	General function prediction only [R]	1.34
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.34
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	1.34
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.34
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.34
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.34
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.67
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.67
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.67
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.67
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.67
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.67
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.67
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.67
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.67
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.67
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.67
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.67
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.67
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
All Organisms	root	All Organisms	46.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
cellular organisms	root	All Organisms → cellular organisms	46.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.37 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.01 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.03 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.34 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.67 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.67 %
Alphaproteobacteria bacterium 32-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 32-64-14	0.67 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.67 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.36 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.34 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.67 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.67 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	0.67 %
Roseospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Roseospira	0.67 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.67 %
Alphaproteobacteria bacterium 32-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 32-64-14	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.72 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	1.34 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.34 %
Kaistia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia soli	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.67 %
Roseospira visakhapatnamensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Roseospira → Roseospira visakhapatnamensis	0.67 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.67 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.67 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.67 %
Alphaproteobacteria bacterium 32-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 32-64-14	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.72 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	1.34 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.34 %
Kaistia soli DSM 19436	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia soli → Kaistia soli DSM 19436	0.67 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.67 %
Bradyrhizobium sp. ORS 285	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 285	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %
Roseospira visakhapatnamensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Roseospira → Roseospira visakhapatnamensis	0.67 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.67 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.67 %
Alphaproteobacteria bacterium 32-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 32-64-14	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101433495	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300004633\|Ga0066395_10386818	Not Available	785	Open in IMG/M
3300005332\|Ga0066388_106096771	Not Available	609	Open in IMG/M
3300005576\|Ga0066708_10267177	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005602\|Ga0070762_10456522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300006176\|Ga0070765_101065089	Not Available	764	Open in IMG/M
3300009143\|Ga0099792_10551981	Not Available	728	Open in IMG/M
3300010046\|Ga0126384_10687119	Not Available	905	Open in IMG/M
3300010046\|Ga0126384_11974508	Not Available	557	Open in IMG/M
3300010048\|Ga0126373_11398580	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300010048\|Ga0126373_11598886	Not Available	716	Open in IMG/M
3300010048\|Ga0126373_12761454	Not Available	548	Open in IMG/M
3300010048\|Ga0126373_13251561	Not Available	506	Open in IMG/M
3300010358\|Ga0126370_10597631	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010358\|Ga0126370_11672268	Not Available	612	Open in IMG/M
3300010358\|Ga0126370_12444231	Not Available	520	Open in IMG/M
3300010358\|Ga0126370_12452967	Not Available	519	Open in IMG/M
3300010359\|Ga0126376_10362826	Not Available	1289	Open in IMG/M
3300010360\|Ga0126372_10161919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1806	Open in IMG/M
3300010360\|Ga0126372_11468830	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010361\|Ga0126378_10568498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Roseospira → Roseospira visakhapatnamensis	1248	Open in IMG/M
3300010361\|Ga0126378_12507756	Not Available	589	Open in IMG/M
3300010361\|Ga0126378_12540596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300010362\|Ga0126377_10714560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1056	Open in IMG/M
3300010362\|Ga0126377_10909292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300010366\|Ga0126379_10225850	Not Available	1823	Open in IMG/M
3300010366\|Ga0126379_10513310	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300010366\|Ga0126379_10611528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300010376\|Ga0126381_100962373	Not Available	1231	Open in IMG/M
3300010376\|Ga0126381_101499527	Not Available	974	Open in IMG/M
3300010376\|Ga0126381_102036574	Not Available	827	Open in IMG/M
3300010376\|Ga0126381_102257142	Not Available	782	Open in IMG/M
3300010376\|Ga0126381_103038285	Not Available	666	Open in IMG/M
3300010376\|Ga0126381_103501115	Not Available	617	Open in IMG/M
3300010376\|Ga0126381_103730910	Not Available	596	Open in IMG/M
3300010376\|Ga0126381_105076207	Not Available	504	Open in IMG/M
3300010398\|Ga0126383_13251759	Not Available	531	Open in IMG/M
3300012209\|Ga0137379_10191372	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1958	Open in IMG/M
3300012362\|Ga0137361_10202166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1797	Open in IMG/M
3300012971\|Ga0126369_10692514	Not Available	1096	Open in IMG/M
3300012971\|Ga0126369_11052590	Not Available	902	Open in IMG/M
3300012971\|Ga0126369_11328534	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300012989\|Ga0164305_10797893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	783	Open in IMG/M
3300016294\|Ga0182041_10580402	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300016294\|Ga0182041_12261368	Not Available	508	Open in IMG/M
3300016319\|Ga0182033_10234824	Not Available	1481	Open in IMG/M
3300016319\|Ga0182033_10783057	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300016357\|Ga0182032_10055686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2591	Open in IMG/M
3300016357\|Ga0182032_10318756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1233	Open in IMG/M
3300016357\|Ga0182032_11158955	Not Available	664	Open in IMG/M
3300016357\|Ga0182032_11922579	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300016371\|Ga0182034_10046092	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300016371\|Ga0182034_10356678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300016371\|Ga0182034_10592835	Not Available	934	Open in IMG/M
3300016371\|Ga0182034_10631478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300016371\|Ga0182034_11144316	Not Available	676	Open in IMG/M
3300016387\|Ga0182040_10331157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300016404\|Ga0182037_11183921	Not Available	671	Open in IMG/M
3300016404\|Ga0182037_11544919	Not Available	589	Open in IMG/M
3300016404\|Ga0182037_11834070	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300016404\|Ga0182037_12079623	Not Available	510	Open in IMG/M
3300016422\|Ga0182039_10907501	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300016445\|Ga0182038_10421730	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300016445\|Ga0182038_11883311	Not Available	540	Open in IMG/M
3300020580\|Ga0210403_10321653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1267	Open in IMG/M
3300020580\|Ga0210403_10329403	Not Available	1250	Open in IMG/M
3300020580\|Ga0210403_11324605	Not Available	549	Open in IMG/M
3300020581\|Ga0210399_10220281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1580	Open in IMG/M
3300020583\|Ga0210401_10914052	Not Available	736	Open in IMG/M
3300021168\|Ga0210406_10598806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300021170\|Ga0210400_10369866	Not Available	1181	Open in IMG/M
3300021170\|Ga0210400_10402762	Not Available	1128	Open in IMG/M
3300021170\|Ga0210400_10998867	Not Available	680	Open in IMG/M
3300021178\|Ga0210408_10680285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300021180\|Ga0210396_10016709	All Organisms → cellular organisms → Bacteria	6818	Open in IMG/M
3300021404\|Ga0210389_10444957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300021474\|Ga0210390_11201607	Not Available	612	Open in IMG/M
3300021478\|Ga0210402_10539451	Not Available	1083	Open in IMG/M
3300021560\|Ga0126371_10424992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1473	Open in IMG/M
3300021560\|Ga0126371_11073415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300021560\|Ga0126371_12071659	Not Available	685	Open in IMG/M
3300021560\|Ga0126371_13509606	Not Available	529	Open in IMG/M
3300022533\|Ga0242662_10308893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	529	Open in IMG/M
3300025916\|Ga0207663_10947360	Not Available	689	Open in IMG/M
3300027094\|Ga0208094_105161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	635	Open in IMG/M
3300027812\|Ga0209656_10515100	Not Available	521	Open in IMG/M
3300028047\|Ga0209526_10310291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300029636\|Ga0222749_10209919	Not Available	977	Open in IMG/M
3300031122\|Ga0170822_13711704	Not Available	508	Open in IMG/M
3300031561\|Ga0318528_10295146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300031561\|Ga0318528_10582381	Not Available	600	Open in IMG/M
3300031573\|Ga0310915_10568298	Not Available	804	Open in IMG/M
3300031573\|Ga0310915_10814542	Not Available	656	Open in IMG/M
3300031680\|Ga0318574_10052872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2143	Open in IMG/M
3300031681\|Ga0318572_10760827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	576	Open in IMG/M
3300031719\|Ga0306917_10034794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3277	Open in IMG/M
3300031724\|Ga0318500_10282114	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031724\|Ga0318500_10462136	Not Available	636	Open in IMG/M
3300031736\|Ga0318501_10587787	Not Available	611	Open in IMG/M
3300031744\|Ga0306918_11064277	Not Available	627	Open in IMG/M
3300031744\|Ga0306918_11445889	Not Available	526	Open in IMG/M
3300031768\|Ga0318509_10127181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1394	Open in IMG/M
3300031771\|Ga0318546_10007117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5697	Open in IMG/M
3300031771\|Ga0318546_10740258	Not Available	692	Open in IMG/M
3300031771\|Ga0318546_10745829	Not Available	689	Open in IMG/M
3300031782\|Ga0318552_10435954	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300031792\|Ga0318529_10384992	Not Available	653	Open in IMG/M
3300031799\|Ga0318565_10558833	Not Available	551	Open in IMG/M
3300031805\|Ga0318497_10031766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2639	Open in IMG/M
3300031833\|Ga0310917_10569637	Not Available	769	Open in IMG/M
3300031879\|Ga0306919_10730961	Not Available	762	Open in IMG/M
3300031890\|Ga0306925_11301127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia soli → Kaistia soli DSM 19436	722	Open in IMG/M
3300031890\|Ga0306925_11479286	Not Available	666	Open in IMG/M
3300031893\|Ga0318536_10427303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300031893\|Ga0318536_10445178	Not Available	653	Open in IMG/M
3300031894\|Ga0318522_10278871	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031897\|Ga0318520_10693276	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031910\|Ga0306923_10748897	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300031912\|Ga0306921_10003070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	16877	Open in IMG/M
3300031912\|Ga0306921_11019572	Not Available	932	Open in IMG/M
3300031941\|Ga0310912_10291487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 285	1262	Open in IMG/M
3300031941\|Ga0310912_10681159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300031942\|Ga0310916_10530222	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031942\|Ga0310916_10782830	Not Available	804	Open in IMG/M
3300031942\|Ga0310916_11004076	Not Available	696	Open in IMG/M
3300031945\|Ga0310913_10849295	Not Available	643	Open in IMG/M
3300031947\|Ga0310909_10214575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1602	Open in IMG/M
3300031947\|Ga0310909_10800712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300031947\|Ga0310909_10989138	Not Available	687	Open in IMG/M
3300031947\|Ga0310909_11111838	Not Available	642	Open in IMG/M
3300031947\|Ga0310909_11277479	Not Available	591	Open in IMG/M
3300031954\|Ga0306926_10012735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9399	Open in IMG/M
3300031954\|Ga0306926_10735929	Not Available	1193	Open in IMG/M
3300032001\|Ga0306922_10079144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3449	Open in IMG/M
3300032035\|Ga0310911_10391160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300032042\|Ga0318545_10248786	Not Available	638	Open in IMG/M
3300032043\|Ga0318556_10012672	Not Available	3587	Open in IMG/M
3300032055\|Ga0318575_10200391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300032059\|Ga0318533_10289002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1188	Open in IMG/M
3300032059\|Ga0318533_10557595	Not Available	840	Open in IMG/M
3300032060\|Ga0318505_10260375	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300032060\|Ga0318505_10283821	Not Available	781	Open in IMG/M
3300032090\|Ga0318518_10264336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 32-64-14	883	Open in IMG/M
3300032094\|Ga0318540_10519672	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300032261\|Ga0306920_101595402	Not Available	928	Open in IMG/M
3300032261\|Ga0306920_102885034	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300033289\|Ga0310914_10269541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.66%
Aquatic	Environmental → Aquatic	1.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.66%
Freshwater	Environmental → Aquatic → Freshwater	1.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.96%
Loam	Environmental → Terrestrial → Soil → Loam	4.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.34%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027094	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF022 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1014334951	3300004092	Bog Forest Soil	RIDPLNVAFSLWTVSGDIKAGERIVFRVRQRIDLMKTAAQ*
Ga0066395_103868182	3300004633	Tropical Forest Soil	WSALRIDPLNVALRLWTMSSDITAGERTVFRARQQIDLWKADS*
Ga0066388_1060967711	3300005332	Tropical Forest Soil	ALRVDPLNVSLRLWTVSADIKAGERIVFRARQQIDLAKAYG*
Ga0066708_102671772	3300005576	Soil	RIDPLDVAFRLWTVSGDINAGERILFRARQRIDLMKTAAQ*
Ga0070762_104565221	3300005602	Soil	PLNVAFRLWTLSGDNKAGERIVFRARQRIDLMKTGAQ*
Ga0070765_1010650893	3300006176	Soil	RIDPLNVAFRLWTVSGNIKAGERIAFRARQRIDLMKAAPR*
Ga0099792_105519812	3300009143	Vadose Zone Soil	LNVALRLWTVSADVEAGERTVFRARQQINLTKPYG*
Ga0126384_106871192	3300010046	Tropical Forest Soil	SFWSGLRIDPLNVALRLWTVSADIKAGERTVFRARQQIDLAKAYG*
Ga0126384_119745081	3300010046	Tropical Forest Soil	NVALRLWTVSPDLAAGERTVFRARQKIDLAKGYR*
Ga0126373_111664152	3300010048	Tropical Forest Soil	RIDPLNVALRLWTVSADVKAGERTVFRARQQIDLAKSLIQRPT*
Ga0126373_113985802	3300010048	Tropical Forest Soil	DPLNAAFRLWIVSADLKAGERTVFRARQQIDLAKS*
Ga0126373_115988862	3300010048	Tropical Forest Soil	DPLNVAFRLWTVSGDLRAGERIVFRARQHIELMKAAPG*
Ga0126373_127614541	3300010048	Tropical Forest Soil	FWSALRIDPLNVAARLWTVSGDVKGGERTVFRARQGINLAKAYS*
Ga0126373_132515611	3300010048	Tropical Forest Soil	LALRLWTMSSDIAAGERAVFRARQQIDLWKAFSH*
Ga0126370_105976311	3300010358	Tropical Forest Soil	VRIDPLNVAFRLWTLSGDIKAGKGIVFRARQRIDLMKDQQN*
Ga0126370_116722682	3300010358	Tropical Forest Soil	RFDPLNVALRLWTVSADLTAGERIVFRARQRIDLAKA*
Ga0126370_124442311	3300010358	Tropical Forest Soil	WSALRIDPINVALRLWTVSADIKAGERAIFRARQHINLAKTYS*
Ga0126370_124529672	3300010358	Tropical Forest Soil	IDPLNVALRLWTMSGDINAGERIVFRARQRIDLTKA*
Ga0126376_103628261	3300010359	Tropical Forest Soil	FWSALRIDPLNVAWRLWTVSDDLKAGERTVFRARQQIDLAKGL*
Ga0126372_101619191	3300010360	Tropical Forest Soil	PINVALRLWTVSADIKAGERTVFRARQHIDLAKPFG*
Ga0126372_114688303	3300010360	Tropical Forest Soil	RLWAVSANIKAGERTVFRARQLIDLSKVFGESTPRP*
Ga0126378_105684982	3300010361	Tropical Forest Soil	GLRIDPINVALRLWTVSADIKAGERTVFRARQQIDLAKAYG*
Ga0126378_125077561	3300010361	Tropical Forest Soil	LRIDPINVALRLWTVSGDIKAGERTVFRARQQIDLARA*
Ga0126378_125405961	3300010361	Tropical Forest Soil	SALRFDPLNVALRLWTVSPDFAAGERIVFRARQRIDLAKASD*
Ga0126377_107145601	3300010362	Tropical Forest Soil	VAFRLWTVSGDIKAGERIVFRARQQIDLMKDRSRE*
Ga0126377_109092921	3300010362	Tropical Forest Soil	IDPLNVALRLWTVSADVKAGERIVFRARQQIDLAKAFG*
Ga0126379_102258503	3300010366	Tropical Forest Soil	SALRIDPLNVALRLWTVSADIKAGERTVFRARQHIDLAKTYN*
Ga0126379_105133104	3300010366	Tropical Forest Soil	TFWSTLCIDPVNVALRLWTVSADLRAGERTVFRARQQIDLAKAY*
Ga0126379_106115281	3300010366	Tropical Forest Soil	TFWSALRVDPLNVSLRLWTVSADIKAGERIVFRARQQINLAKAYG*
Ga0126381_1009623732	3300010376	Tropical Forest Soil	IDPLNVALRLWTVSGDINAGERIVFRARQRIDLMKA*
Ga0126381_1014995272	3300010376	Tropical Forest Soil	VRIDPLNVAFRLWTISGDIKAGERTVFRARQKINLLKNY*
Ga0126381_1020365741	3300010376	Tropical Forest Soil	NVSLRLWTVSADIKAGERIVFRARQQIDLAKAYG*
Ga0126381_1022571422	3300010376	Tropical Forest Soil	VRIDPLNVAFRLWTVSGDIKAGERIVFRARQQIDLTKA*
Ga0126381_1030382851	3300010376	Tropical Forest Soil	TFWSSLRIDPINVALRLWTVSGDIKAGERTVFRGRQQIDLIKAWG*
Ga0126381_1035011151	3300010376	Tropical Forest Soil	IDPLNVALRLWTVSADIKAGERTVFRARQQIDLVKV*
Ga0126381_1037309102	3300010376	Tropical Forest Soil	WSALRMDPVSVALRLWTISADVEAGERTVFRARQQIDLAKAYS*
Ga0126381_1050762071	3300010376	Tropical Forest Soil	LTFWSTLRIDPINVALRLWSISADVEGGERTVFRARQRINLAKGFG*
Ga0126383_132517592	3300010398	Tropical Forest Soil	VNVALRLWTVSTDLKAGERTVFRARQHIDLAKAYG*
Ga0137379_101913725	3300012209	Vadose Zone Soil	WGDLGIDPLNVALRLWTISGDVVAGARIIFRARQHINLMRS*
Ga0137361_102021662	3300012362	Vadose Zone Soil	NVAFRLWTVSGDIKAGERIVFRARQQINLMKVND*
Ga0126369_106925143	3300012971	Tropical Forest Soil	WSALYIDPLNVALRLWTVSGDINAGERIVFRARQRIDLMKA*
Ga0126369_110525901	3300012971	Tropical Forest Soil	TFWSALRIDPINVALRLWTVSADVKAGERTVFRARQQIDLAKAYG*
Ga0126369_113285342	3300012971	Tropical Forest Soil	VDPLNVSLRLWTVSANIKAGERIVFRARQQINLAKAYG*
Ga0164305_107978931	3300012989	Soil	NVALRLWTVSGDIEAGERIVFRARQRINLMKGVG*
Ga0182041_105804022	3300016294	Soil	RIDPLNVALRLWSVSADMEAGERTVFRARQQIDLAKEFS
Ga0182041_122613681	3300016294	Soil	SALRIDPVNVALRLWTVSADVKAGERTVFRARQGINLAKAYS
Ga0182033_102348242	3300016319	Soil	RIDPLNVAFRLWIVSADLEAGERTVFRARQHIDLAKP
Ga0182033_107830571	3300016319	Soil	TFWSALRIDPLNVALRLWTVSADVKAGERTVFRARQQINLAKAYS
Ga0182032_100556861	3300016357	Soil	DSLNVALRSWTVSADIEAGDRIVFRARQQINLANAYG
Ga0182032_103187561	3300016357	Soil	LTFWSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0182032_111589551	3300016357	Soil	WSALRIDPLNVALRLWSVSADMEAGERTVFRARQQIDLAKEFS
Ga0182032_119225792	3300016357	Soil	ALRIDPVNVALRLWTISADVKAGERTVFRARQGINLAKAYS
Ga0182034_100460925	3300016371	Soil	PLNVALRLWSVSADMEAGERTVFRARQQIDLAKEFS
Ga0182034_103566781	3300016371	Soil	FWSTLRLDPVNVALRLWTISADVEAGERTVFRARQSIDLAKGFG
Ga0182034_105928352	3300016371	Soil	DPVNVALWLWTVSADIQAGERTVFRARQQMDLAKA
Ga0182034_106314781	3300016371	Soil	PLNVALRLWTVSADVKAGERTVFRARQQINLAKAYS
Ga0182034_111443163	3300016371	Soil	DPINVALRLWTVSADIKAGERTVFRARQQIDLVKA
Ga0182040_103311571	3300016387	Soil	STVRIDPLNVAFRLWTISGDIKAGQRIVFRARQKINLLKSYW
Ga0182037_111839212	3300016404	Soil	RIDPLDVASRLWTVSGDIKAGERIIFRARQRIDLMKI
Ga0182037_115449191	3300016404	Soil	DPLNVALRLWTVSGDLKAGDRIVFRARQHIDLMKAAPR
Ga0182037_118340701	3300016404	Soil	RFWSTLRIDPLNVALRLWTVSGDIEAGERIVFRARQRIKI
Ga0182037_120796231	3300016404	Soil	VNAALRLWTVSADIRAGERTVFRARQQIDLAKANG
Ga0182039_109075012	3300016422	Soil	WSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKEFS
Ga0182038_104217303	3300016445	Soil	VNVALRLWTVSADLEAGERTVFRARQQINLSKPYG
Ga0182038_118833111	3300016445	Soil	PLNVAFRLCTVSEDIKAGERVVFRARQRINLMKITG
Ga0210403_103216531	3300020580	Soil	PLNVAFCLWTLSGDIKAGERIVFRARQRIDLMKTAAQ
Ga0210403_103294033	3300020580	Soil	DIGIDPLDAASALWTKSGDPEAGDRIIFRARQAIALRKP
Ga0210403_113246051	3300020580	Soil	NVALRLWTVSGDLEAGERTVFRARQHINLMKAAGDRPG
Ga0210399_102202811	3300020581	Soil	LRIDPLNVAFRLWTLSGDIKAGERIVFRARQRIDLMKTAAQ
Ga0210401_109140522	3300020583	Soil	LNVALRLWTISGDLKAGERIVFRARQQIDLLKDGPP
Ga0210406_105988061	3300021168	Soil	FDPLNVALRLWAVSSDVEAGERTVFRARQQINLAKAYG
Ga0210400_103698661	3300021170	Soil	LRIDPRNVAFRLWTLSGDIKAGERIVFRARQRIDLMKTAAQ
Ga0210400_104027621	3300021170	Soil	PLNVAFRLWTLSGDIRAGERIVFRARQRIDLMKTAAQ
Ga0210400_109988671	3300021170	Soil	RIDPLNVAFRLWTVSGDIKAGERIAFRARQQIDLMKAM
Ga0210408_106802853	3300021178	Soil	TFWSAIRFDPLNVALRLWAVSSDVEAGERTVFRARQQINLAKAYG
Ga0210396_1001670910	3300021180	Soil	DPLNVAFRLWTLSGDIKAGERIVFRARQRIDLMKTAAQ
Ga0210389_104449571	3300021404	Soil	IDPLNVAFRLWTLSGDIKAGERIVFRARQRIDLMKTAAQ
Ga0210390_112016071	3300021474	Soil	IDPLNVSLRLWTVSGDVTAGIRIIERARQAIELRSRSPSI
Ga0210402_105394511	3300021478	Soil	ALRIDPLNVALRLWTVAADVRAGERTVFRARQQINLAKAYS
Ga0126371_104249923	3300021560	Tropical Forest Soil	RIDPLNVALRLWTVSADVKAGERTVFRARQQIDLARA
Ga0126371_110734152	3300021560	Tropical Forest Soil	RIDPLNVSLRLWTISADLKAGERIVFRARQHIDLAKAIG
Ga0126371_120716591	3300021560	Tropical Forest Soil	PLNVALRLWTVSADLTAGERIVFRARQHIDLTKAYR
Ga0126371_135096061	3300021560	Tropical Forest Soil	LWTVSGDIKAGERTVFRARQQIDLAKPFGEDARWL
Ga0242662_103088931	3300022533	Soil	LNVDFRLWTLSGDIRAGERIVFRARQRIDLMKTAAQ
Ga0207663_109473602	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DPLNVALRLWTVSADIAAGERTVFRARQQIDLAKAYG
Ga0208094_1051611	3300027094	Forest Soil	TLRIDPLNVAFRLWTLSGDNKAGERIVFRARQRINLMKGVG
Ga0209656_105151001	3300027812	Bog Forest Soil	VLRIDPLNVALRLWTLSGDLEAVFRARQHINLMKAAGERPG
Ga0209526_103102911	3300028047	Forest Soil	PLNVAFRLWTLSGDIKAGERIVFRARQRIDLMKTGAQ
Ga0222749_102099191	3300029636	Soil	LRIDPLNVALRLWTVSADVEAAERIVFRARQHINLAKAYG
Ga0170822_137117041	3300031122	Forest Soil	SVLHIDPLNVAFRLWTVSGDIKAGERIVFRARQQINLMKVNG
Ga0318528_102951462	3300031561	Soil	LNVALRLWTVSGDEKGGARTVFRARQRINLAKASG
Ga0318528_105823811	3300031561	Soil	ALRIDPVNVALRLWTISADVEAGERTVFRARQRIDLAKAYR
Ga0310915_105682982	3300031573	Soil	TFWSALRIDPVNVALRLWTVSADIQAGERTVFRARQQIDLAKA
Ga0310915_108145422	3300031573	Soil	STIRIDPLNVAFRLWTVSGDIQAGERIVFRARQQIDLMKVND
Ga0318574_100528725	3300031680	Soil	TFWSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0318572_107608271	3300031681	Soil	LRIDPLNVALRLWSVSADMEAGERTVFRARQQIDLAKEFS
Ga0306917_100347941	3300031719	Soil	TFWSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKEFS
Ga0318500_102821142	3300031724	Soil	LTVALRLWTVSANVEAGERTVFRARQQIDLAKPYR
Ga0318500_104621361	3300031724	Soil	RIDPLNVALRLWTVSADVEAGERTVFRARQHINLAKAYG
Ga0318501_105877871	3300031736	Soil	SPLRIDPLGVALRLWTISADVEAGERTVFRARQQIHLAKAYR
Ga0306918_110642772	3300031744	Soil	DPLNVAFRLWTVSGDIKAGERIVFRARQQIDLMKVNA
Ga0306918_114458891	3300031744	Soil	RIDPLNVAFRLWIVSADLAAGERTVFRARQQIDLAKS
Ga0318509_101271814	3300031768	Soil	LNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0318546_100071171	3300031771	Soil	FWSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0318546_107402582	3300031771	Soil	IDPVNVASWLWTVSADVKAGERTVFRARQQIDLAKTYS
Ga0318546_107458291	3300031771	Soil	LRIDPVSVALRLWTISADVEAGERTVFRARQGINLAKAYS
Ga0318552_104359541	3300031782	Soil	ALRIDPLNVALRLWSVSADMEAGERTVFRARQQIDLAKEFS
Ga0318529_103849922	3300031792	Soil	SALRIDSLNVALRLWTVSADLKAGERTVFRARQQIDLAKA
Ga0318565_105588332	3300031799	Soil	CIDPLSVALRLWTVSADVEAGQRTVFRARQRIDLAKA
Ga0318497_100317661	3300031805	Soil	SALRIDPLSVALRLWTVSADVEAGQRTVFRARQRIDLAKA
Ga0310917_105696371	3300031833	Soil	IEPLNVALRLWTMSSDIAAGERTVFRARQQIDLWKAYRQ
Ga0318511_105677961	3300031845	Soil	NVSLRLWIVSGDEKAEARTVVRARQQIDLAKAHPAS
Ga0306919_107309611	3300031879	Soil	FWSTVRIDPLNVAFRLWTVSGDIQAGERIVFRARQQIDLTKAYS
Ga0306925_113011271	3300031890	Soil	FWYAPRIDSLNVALRSWTVSADIEAGDRIVFRARQQINLANAYG
Ga0306925_114792861	3300031890	Soil	LRIDPLGVAARLWTVSADVKAGERAVFRARQHINLAKTYS
Ga0318536_104273032	3300031893	Soil	LTFWSALSIDPLNVALRLWTVSADLQAGERTVFRARQRIDLA
Ga0318536_104451783	3300031893	Soil	SALCIDPLNVALRSWTVSADIEAGDRIVFRARQQINLANAYG
Ga0318522_102788711	3300031894	Soil	RIDPLNVALRLWTVSADIKAGERTVFRARQQIDLAKAYS
Ga0318520_106932762	3300031897	Soil	LTFWSALRIDPINVALRLWTVSADINAGERTVFRARQQIDLARA
Ga0306923_107488973	3300031910	Soil	RIDPLNVALRLWTVSADMEAGERTVFRARQQIDLAKASG
Ga0306921_1000307022	3300031912	Soil	LRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0306921_110195722	3300031912	Soil	IRIDPLNVAFHLWTVSGDITAGERIVFRARQQIDLMKVNA
Ga0310912_102914871	3300031941	Soil	DPLNVALRLWTVSADMESGERTVFRARQQIDLAKEFG
Ga0310912_106811592	3300031941	Soil	IDPLNVAFRLWTVSGDIKAGERIVFRARQQIDLMKVND
Ga0310916_105302221	3300031942	Soil	LNVALRLWSVSADMEAAERTVFRARQQIDLAKEFS
Ga0310916_107828302	3300031942	Soil	LRIDSLNVALRLWTVSADLKAGERTVFRARQQIDLAKA
Ga0310916_110040762	3300031942	Soil	STLRIDPLNVALRLWTVSSDVKAGERTVFRARQQIDLAKAYV
Ga0310913_108492952	3300031945	Soil	VNVALRLWTISADVEAGERTVFRARQRIDLAKAYR
Ga0310909_102145751	3300031947	Soil	LRLDPVNVALRLWTISADVEAGERTVFRARQSTNLAKGFG
Ga0310909_108007121	3300031947	Soil	IDPLNVAMRLWTVSGDEKGGARTVFQARQRINLAKASG
Ga0310909_109891382	3300031947	Soil	WSTVRIDPLNVAFRLWTVSGDIKAGERIVFRARQQIDLMKVNA
Ga0310909_111118381	3300031947	Soil	WSALRIDPLNVALRLWSVSADIEAGERTVFRARQQIDLTKEYS
Ga0310909_112774792	3300031947	Soil	LRIDPVNVALRLWTISADIKAGERTVFRARQQIDLVKA
Ga0306926_1001273513	3300031954	Soil	WSALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKGFS
Ga0306926_107359291	3300031954	Soil	AALRIDPLNVAERLWTISADIKAGERTVFRARQQIDLAKPFG
Ga0306922_100791441	3300032001	Soil	LTFWSTIRIDPLNVAFRLWTVSGDIQAGERIVFRARQQIDLMKVND
Ga0310911_103911601	3300032035	Soil	ALRIDPVSVALRLWAVSDDQRAGQRTVFRARQHIDLAKAYAE
Ga0318545_102487862	3300032042	Soil	SALRIDPINVALRLWTVSADIKAGERTVFRARQQIDLARA
Ga0318556_100126721	3300032043	Soil	TVRIDPLNVAFRLWTVSGDIQAGERIVFRARQQIDLTKAYS
Ga0318575_102003911	3300032055	Soil	WSALRIDPLNVALRLWTVSANVEAGKRTVFRARQQIDLAKAYS
Ga0318533_102890021	3300032059	Soil	DPLNVAFRLWIVSADLKAGERTVFRARQRIDLAKPFG
Ga0318533_105575951	3300032059	Soil	WSALRIDPVNVALRLWTMSADVKAGERTVFRARQGINLAKAYS
Ga0318505_102603751	3300032060	Soil	VDPLNVAFRLWTVSGDIDAAERIVFRARQRINLAKAYT
Ga0318505_102838211	3300032060	Soil	STVRIDPLNVAFRLWTVSGDIKAGERIVFRARQQIDLTKAYN
Ga0318518_102643364	3300032090	Soil	NVALRLWTMSSDIAAGERTVFRARQQIDLWKAYRQ
Ga0318540_105196722	3300032094	Soil	RIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKEFS
Ga0306920_1015954021	3300032261	Soil	LNVALRLWTVSGDLKAGDRIVFRARQHIDLMKAAPR
Ga0306920_1028850341	3300032261	Soil	PINVALRLWTVSADIRAGERTVFRARQQIDLAKAYG
Ga0310914_102695411	3300033289	Soil	ALRIDPLNVALRLWSVSADMEAAERTVFRARQQIDLAKEFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047777

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences