Metagenome / Metatranscriptome Family F047736

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047736
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	47 residues
Representative Sequence	DRETREIFQDPDTNLLYVTDGNGGGLTVLRYTGPIPKDPPLPGAR
Number of Associated Samples	125
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	91.28 %
% of genes from short scaffolds (< 2000 bps)	85.23 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.738 % of family members)
Environment Ontology (ENVO)	Unclassified (26.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.651 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.18% Coil/Unstructured: 80.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF07732	Cu-oxidase_3	13.42
PF08309	LVIVD	3.36
PF07987	DUF1775	2.68
PF03030	H_PPase	2.01
PF02738	MoCoBD_1	1.34
PF07311	Dodecin	1.34
PF11604	CusF_Ec	1.34
PF04909	Amidohydro_2	1.34
PF04234	CopC	1.34
PF02566	OsmC	1.34
PF00027	cNMP_binding	1.34
PF00873	ACR_tran	1.34
PF07885	Ion_trans_2	0.67
PF01425	Amidase	0.67
PF13437	HlyD_3	0.67
PF12697	Abhydrolase_6	0.67
PF13340	DUF4096	0.67
PF09339	HTH_IclR	0.67
PF00753	Lactamase_B	0.67
PF02518	HATPase_c	0.67
PF00529	CusB_dom_1	0.67
PF07676	PD40	0.67
PF14347	DUF4399	0.67
PF00392	GntR	0.67
PF00080	Sod_Cu	0.67
PF05378	Hydant_A_N	0.67
PF13458	Peripla_BP_6	0.67
PF14226	DIOX_N	0.67
PF05119	Terminase_4	0.67
PF00497	SBP_bac_3	0.67
PF03401	TctC	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	13.42
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	3.36
COG4549	Uncharacterized conserved protein YcnI, contains cohesin/reeler-like domain	Function unknown [S]	2.68
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	2.01
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.34
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.34
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.34
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	1.34
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.34
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.67
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.67
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.67
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.79 %
Unclassified	root	N/A	12.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	6.04 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.45 %
Unclassified	root	N/A	12.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	6.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.34 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.45 %
Unclassified	root	N/A	12.75 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6.04 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5.37 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.01 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	1.34 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.45 %
Unclassified	root	N/A	12.75 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	6.04 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	5.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.01 %
Armatimonadetes bacterium 13_1_40CM_64_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_64_14	1.34 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.45 %
Unclassified	root	N/A	12.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.04 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	5.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.01 %
Armatimonadetes bacterium 13_1_40CM_64_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_64_14	1.34 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.67 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.45 %
Unclassified	root	N/A	12.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.04 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	5.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.01 %
Armatimonadetes bacterium 13_1_40CM_64_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_64_14	1.34 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.67 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1080837	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300000787\|JGI11643J11755_11697762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300001686\|C688J18823_10824419	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300002121\|C687J26615_10086189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300002912\|JGI25386J43895_10049872	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300004081\|Ga0063454_100412772	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300004153\|Ga0063455_101131169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300004463\|Ga0063356_105350344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300004633\|Ga0066395_10357118	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300004633\|Ga0066395_10460479	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300005177\|Ga0066690_10695787	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300005328\|Ga0070676_10147054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1505	Open in IMG/M
3300005332\|Ga0066388_100376368	All Organisms → cellular organisms → Bacteria → Proteobacteria	2066	Open in IMG/M
3300005332\|Ga0066388_100953475	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300005332\|Ga0066388_102030960	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300005332\|Ga0066388_104325009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005332\|Ga0066388_104890519	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005332\|Ga0066388_106173589	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005338\|Ga0068868_101554982	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005354\|Ga0070675_100415542	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005367\|Ga0070667_102272529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300005439\|Ga0070711_101579777	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005450\|Ga0066682_10805654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005537\|Ga0070730_10924955	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005548\|Ga0070665_100763942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	979	Open in IMG/M
3300005556\|Ga0066707_10300752	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005557\|Ga0066704_10404490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300005563\|Ga0068855_101755253	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005568\|Ga0066703_10773873	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300005569\|Ga0066705_10408888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300005713\|Ga0066905_100482026	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005713\|Ga0066905_101310188	Not Available	652	Open in IMG/M
3300005764\|Ga0066903_100235250	All Organisms → cellular organisms → Bacteria	2801	Open in IMG/M
3300005764\|Ga0066903_101460016	Not Available	1289	Open in IMG/M
3300005764\|Ga0066903_107821703	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006028\|Ga0070717_10967738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300006034\|Ga0066656_11131840	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006237\|Ga0097621_101675265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300006796\|Ga0066665_10972862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_64_14	653	Open in IMG/M
3300006852\|Ga0075433_10481857	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300006852\|Ga0075433_11564538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	569	Open in IMG/M
3300006853\|Ga0075420_100831488	Not Available	795	Open in IMG/M
3300006914\|Ga0075436_101463426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300007004\|Ga0079218_10509140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1068	Open in IMG/M
3300007004\|Ga0079218_11824180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	683	Open in IMG/M
3300007004\|Ga0079218_12973895	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009012\|Ga0066710_102654620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300009012\|Ga0066710_104329050	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009038\|Ga0099829_11457289	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009038\|Ga0099829_11744138	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009090\|Ga0099827_10088142	All Organisms → cellular organisms → Bacteria → Proteobacteria	2440	Open in IMG/M
3300009090\|Ga0099827_11455868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300009100\|Ga0075418_11285962	Not Available	793	Open in IMG/M
3300009162\|Ga0075423_12359316	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300009162\|Ga0075423_13148318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	506	Open in IMG/M
3300009813\|Ga0105057_1052721	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010046\|Ga0126384_10159394	All Organisms → cellular organisms → Bacteria → Proteobacteria	1746	Open in IMG/M
3300010047\|Ga0126382_11055708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300010159\|Ga0099796_10067520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300010166\|Ga0126306_10304013	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300010360\|Ga0126372_11755055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	663	Open in IMG/M
3300010361\|Ga0126378_12234559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300010361\|Ga0126378_12893717	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010362\|Ga0126377_12028358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300010362\|Ga0126377_13003853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010366\|Ga0126379_10384643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1446	Open in IMG/M
3300010371\|Ga0134125_12465567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	565	Open in IMG/M
3300010376\|Ga0126381_103434360	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010376\|Ga0126381_104455243	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300010400\|Ga0134122_10699412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	952	Open in IMG/M
3300010868\|Ga0124844_1140414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300011271\|Ga0137393_11618786	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012189\|Ga0137388_11262449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300012189\|Ga0137388_11375472	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012189\|Ga0137388_11861840	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012210\|Ga0137378_10523209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300012351\|Ga0137386_10818484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012357\|Ga0137384_10300699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300012360\|Ga0137375_11260279	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012362\|Ga0137361_11678755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012924\|Ga0137413_10026758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3113	Open in IMG/M
3300012929\|Ga0137404_11945845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012948\|Ga0126375_11141427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300012958\|Ga0164299_11209969	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012960\|Ga0164301_10213508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300012971\|Ga0126369_11455066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300013104\|Ga0157370_10677910	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300013296\|Ga0157374_10636259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300013307\|Ga0157372_11254695	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300014154\|Ga0134075_10510995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300014495\|Ga0182015_10659515	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300014497\|Ga0182008_10471998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300014838\|Ga0182030_11379898	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300015372\|Ga0132256_101343569	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300016270\|Ga0182036_11599335	Not Available	549	Open in IMG/M
3300016357\|Ga0182032_10555760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	950	Open in IMG/M
3300016445\|Ga0182038_11291532	Not Available	652	Open in IMG/M
3300017930\|Ga0187825_10289584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300018052\|Ga0184638_1332683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018079\|Ga0184627_10269956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300018468\|Ga0066662_11857571	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300018469\|Ga0190270_12310938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	599	Open in IMG/M
3300018476\|Ga0190274_10317493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300021405\|Ga0210387_11787219	Not Available	518	Open in IMG/M
3300022563\|Ga0212128_10820789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300024860\|Ga0256344_1009867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2089	Open in IMG/M
3300025903\|Ga0207680_10718878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300025903\|Ga0207680_10831854	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300025913\|Ga0207695_10634054	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300025918\|Ga0207662_11146109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300026089\|Ga0207648_11870883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300026306\|Ga0209468_1083305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_64_14	1063	Open in IMG/M
3300026313\|Ga0209761_1163231	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300026328\|Ga0209802_1093511	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300027874\|Ga0209465_10284195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300028379\|Ga0268266_11405346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	673	Open in IMG/M
3300028791\|Ga0307290_10001810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6873	Open in IMG/M
3300028810\|Ga0307294_10266089	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300028869\|Ga0302263_10446011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300029883\|Ga0311327_10705012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300029911\|Ga0311361_10258207	All Organisms → cellular organisms → Bacteria → Proteobacteria	2027	Open in IMG/M
3300029992\|Ga0302276_10283597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300031198\|Ga0307500_10162140	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031232\|Ga0302323_100128211	All Organisms → cellular organisms → Bacteria → Proteobacteria	2488	Open in IMG/M
3300031247\|Ga0265340_10172886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300031470\|Ga0272432_1016551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5915	Open in IMG/M
3300031573\|Ga0310915_10699602	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031912\|Ga0306921_12316894	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031995\|Ga0307409_101646733	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300032013\|Ga0310906_10342379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300032035\|Ga0310911_10810021	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300032060\|Ga0318505_10138479	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300032075\|Ga0310890_11542016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300032205\|Ga0307472_101464810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300032205\|Ga0307472_102774371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300033289\|Ga0310914_10535680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300034025\|Ga0334940_023028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.19%
Host-Associated	Host-Associated	20.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.84%
Plants	Host-Associated → Plants	20.81%
Aquatic	Environmental → Aquatic	3.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Peat	Environmental → Terrestrial → Peat	3.36%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Sediment	Environmental → Aquatic → Sediment	1.34%
Roots	Host-Associated → Plants → Roots	1.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.67%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.35%
Loam	Environmental → Terrestrial → Soil → Loam	16.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.67%
River	Environmental → Aquatic → Freshwater → River	0.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.67%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.67%
Sand	Environmental → Terrestrial → Soil → Sand	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.67%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.37%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.01%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.34%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.67%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.67%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.67%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.67%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300024860	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10808373	2228664021	Soil	PNGGALRHTREPYQDPDTGLIYVTDGNGGGVTVLKWTGRIPPPPIPGAR
JGI11643J11755_116977622	3300000787	Soil	TCGGSDPNGGALRHTREPYQDPDTNLIYVTDGNGGGITVLRWTGDIPPRPPIPGAR*
F14TB_1101845482	3300001431	Soil	EVGYYLSPRYASFGYVDRQSREVFQDPDTNLIYVTDGNGGGLTVLEWTGLIPKHPPMPGAR*
C688J18823_108244192	3300001686	Soil	GRHTREPYPDWDSDLIYVTDGNGGGLTALRYTGALPTKPPTPGVR*
C687J26615_100861892	3300002121	Soil	RRDRHTREVFQDPDTGLLYLTDGNGSGLMVLRYTGPIPKALPIPGAR*
JGI25386J43895_100498721	3300002912	Grasslands Soil	VFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGVR*
Ga0063454_1004127722	3300004081	Soil	IDVPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGALPSRPPIPGVR*
Ga0062593_1005991511	3300004114	Soil	PREVGYYLPPKYASWGYVDRQTREVFQDPDTDLIYVTDGNGGGLTVLEWTGPIPKHPPIPAAR*
Ga0063455_1011311691	3300004153	Soil	GRNDRHTREIFQDPDTGLLYVTDGNGGGLTVLRYTGPIPDKLPIPGGR*
Ga0063356_1053503441	3300004463	Arabidopsis Thaliana Rhizosphere	EPHKVRHTREIWQDPDSNLLYLTDGNGGGLMVLRYTGQIPTRLPIPGAR*
Ga0066395_103571181	3300004633	Tropical Forest Soil	TREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGIR*
Ga0066395_104604791	3300004633	Tropical Forest Soil	TREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR*
Ga0066690_106957871	3300005177	Soil	ALDRHTREVFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGLR*
Ga0070676_101470542	3300005328	Miscanthus Rhizosphere	REVFQDPDNDLIYVTDGNGGGLTVLEWTGPIPKTPPIPGAR*
Ga0066388_1003763682	3300005332	Tropical Forest Soil	ARKDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDQAPIPGGR*
Ga0066388_1009534751	3300005332	Tropical Forest Soil	REIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0066388_1020309601	3300005332	Tropical Forest Soil	APQRQDRHTREIFQDPDTGLLYVTDGNGGGLTVLRYTGPIPERAPFPGAR*
Ga0066388_1043250092	3300005332	Tropical Forest Soil	HTREIFQDPDTGLLYLTDGNGGGLMVLRYTGPIPDKAPFPGAR*
Ga0066388_1048905192	3300005332	Tropical Forest Soil	RESYQDRDSGLLFMTDANGGGVTVLRWTGPIPPRPPIPASVPGSR*
Ga0066388_1061735891	3300005332	Tropical Forest Soil	GRHTREPYPDWDSDIIYVTDGNGGGLTALRFTGPLPTKPPIPGVR*
Ga0068868_1015549822	3300005338	Miscanthus Rhizosphere	PQVRMGYDPRHTRETYQDPDSGLIYMTDGSGGGLTVLRWTGYVPKNRQIPGAR*
Ga0070691_103359472	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PFAPKFVGYYLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0070675_1004155423	3300005354	Miscanthus Rhizosphere	SIPQQIGRHTREAYFDPATNLIYVTDGNGGGVTVVRYTGPMPSNPPIPGATR*
Ga0070671_1014560721	3300005355	Switchgrass Rhizosphere	WDISNPFLPREVGYYLPPKYASWGYVDRQTREVFQDPDTNLIYVTDGNGGGLTVLEWTGPIPKHPPIPGSR*
Ga0070667_1022725291	3300005367	Switchgrass Rhizosphere	YVDRQTREVFQDPDTNLIYVTDGNGGGLTVLEWTGPIPKHPPIPGAR*
Ga0070711_1015797771	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GGPAPVNRHTREEWQDRSTGLLYVTDGSGGGLTVLRWTGPIPANPPIPGAR*
Ga0066682_108056542	3300005450	Soil	EIFQDPDTGLLYLTDGNGGGLMVLRYTGLIPDRLPIPGGR*
Ga0070730_109249552	3300005537	Surface Soil	TREVFQDPATGLLYVTDGNGGGLTVLRWTGPIPRPPLPVR*
Ga0070665_1007639421	3300005548	Switchgrass Rhizosphere	GQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0070704_1014330412	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	YLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0066707_103007522	3300005556	Soil	YSDSALDRHTREVFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGVR*
Ga0066704_104044903	3300005557	Soil	RTHLIYVTDGNGGGVTVLRYTGPMPQRPPIPGAR*
Ga0068855_1017552531	3300005563	Corn Rhizosphere	YTPVFRHSREEFEDPTTGLIYMTDGNGGGLTVLRWTGPVPRNPPLPGAR*
Ga0066703_107738731	3300005568	Soil	APRYAVPGRPADRQIREVYQDPATGLIYMTDGNGGGLTVLRWTGPVPSKPPIPGAR*
Ga0066705_104088882	3300005569	Soil	PRFAAPGRNDRQTREIFQDPDTGLLYLTDGNGGGLMVLRYTGLIPDRLPIPGGR*
Ga0066905_1004820263	3300005713	Tropical Forest Soil	PRQVGRHTREAYIDPKTNLIYVSDGNGGGVTVLRYTGPLPPRAPMPGAR*
Ga0066905_1013101881	3300005713	Tropical Forest Soil	KTNLIYVTDGNGGGVTVLRYTGPIPQHAPIPGAR*
Ga0066903_1002352501	3300005764	Tropical Forest Soil	INVPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGVLPTRPPIPGVR*
Ga0066903_1014600162	3300005764	Tropical Forest Soil	PGQKGRHTREPYPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGVR*
Ga0066903_1078217031	3300005764	Tropical Forest Soil	TREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPAKPPIPGVR*
Ga0070717_109677381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DTSTSFQVGRHTREAFVDPDTMQVYVSDGNSGGITVLRYTGPMPAHPPLPGIR*
Ga0066656_111318402	3300006034	Soil	QIREVYQDPATGLIYMTDGNGGGLTVLRWTGPVPSKPPIPGAR*
Ga0097621_1016752651	3300006237	Miscanthus Rhizosphere	DRHTREIFQDPDTDLIYVSDGNGGGLTVLQWTGPIPKNPPIAGAR*
Ga0068871_1024270112	3300006358	Miscanthus Rhizosphere	RVWDISNPFLPREIGFYLSPKYASFGLVDRHTREVFQDPDTDLIYVTDGNGGGLTVLEWTGPIPKNPPIPGAR*
Ga0066665_109728622	3300006796	Soil	EVYQDPATGLIYMTDGNGGGLTVLRWTGPVPSKPPIPGAR*
Ga0075433_104818572	3300006852	Populus Rhizosphere	PATNLIYVTDGNGGGLTVLRYTGPIPSRPPIPGAR*
Ga0075433_115645382	3300006852	Populus Rhizosphere	VGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0075420_1008314881	3300006853	Populus Rhizosphere	PNRNDRHTREIFQDPDTNLLYVTDGNGGGVMVLRYTGPLPERRPIPGGR*
Ga0075436_1014634261	3300006914	Populus Rhizosphere	FSIPQQVGRHTREAYLDPATNLIYVTDGNGGGITVLRYIGPIPNQPPIPGAR*
Ga0079218_105091401	3300007004	Agricultural Soil	WENDDRRTREVAQDPITNLIYITDGNGGGLTVLRYTGPIPASPPIPGAR*
Ga0079218_115645141	3300007004	Agricultural Soil	EVGFYLPPKYASYGYVDRQTREVFQDPDTDLIYVTDGNGGGLTVLEWTGPIPKDPPIPGAR*
Ga0079218_118241802	3300007004	Agricultural Soil	WENDDRRTREVAQDPITNLIYITDGNGGGLTVLRYTGPIPAGPPIPGAR*
Ga0079218_129738951	3300007004	Agricultural Soil	PPKYASYGYVDRQTREVFQDPDTDLIYVTDGNGGGLTVLEWTGPIPKHPPIPGAR*
Ga0066710_1026546201	3300009012	Grasslands Soil	PNTSPYADSALDRHTREVFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGVR
Ga0066710_1043290501	3300009012	Grasslands Soil	KGRHTREPYPDWDSDLIYVTDGNGGGLTALRYIGPLPTKPPIPGVR
Ga0099829_114572891	3300009038	Vadose Zone Soil	KGRHTREPYPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGIR*
Ga0099829_117441382	3300009038	Vadose Zone Soil	YPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGIR*
Ga0099827_100881421	3300009090	Vadose Zone Soil	TREIFQDPATGLLYLTDGNGGGLMVLRYTGPVPDRPPIPGAR*
Ga0099827_114558681	3300009090	Vadose Zone Soil	VFVDPDTNLVYVTDGNGGGVTVLRYTGPIPERAPIPRVR*
Ga0075418_112859621	3300009100	Populus Rhizosphere	REIFQDPDTNLLYVTDGNGGGVMVLRYTGPLPERRPIPGGR*
Ga0075423_123593161	3300009162	Populus Rhizosphere	TSPYADSALARHTREVFVDPDTNLVYLTDGNGGGLTVLRYTGPIPEQAPILGVR*
Ga0075423_131483181	3300009162	Populus Rhizosphere	PKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0105057_10527212	3300009813	Groundwater Sand	ETYQDRDTGLIYMTDGNGGGLTVLRWTGPIPPKPPIPGAR*
Ga0126384_101593941	3300010046	Tropical Forest Soil	NDRQTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDQAPIPGGR*
Ga0126382_110557081	3300010047	Tropical Forest Soil	DTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0099796_100675201	3300010159	Vadose Zone Soil	PDTGLLYLTDGNGAGLMVLRYTGSIPDKAPIPGGR*
Ga0126306_103040133	3300010166	Serpentine Soil	PRFAAPGREDRHTREVWQDPDTDLIYVTDGNGGGITVVRYTGPIPPGRPIPGAR*
Ga0126372_117550552	3300010360	Tropical Forest Soil	SVPKQVGRHTREAYVDPKTQLIYVTDGNGGGVTVLRYTGPMPQRPPLPGAR*
Ga0126378_122345591	3300010361	Tropical Forest Soil	TREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDQAPIPGGR*
Ga0126378_128937171	3300010361	Tropical Forest Soil	SINVRGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPAKPPIPGVR*
Ga0126377_120283582	3300010362	Tropical Forest Soil	HTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0126377_130038531	3300010362	Tropical Forest Soil	IFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKLPIPGGR*
Ga0126379_103846431	3300010366	Tropical Forest Soil	HTREIFQDPDTGLLYLTDGNGVGLMVLRYTGPIPDKPPIPGGR*
Ga0134125_124655671	3300010371	Terrestrial Soil	ASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0126381_1034343601	3300010376	Tropical Forest Soil	HTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGIR*
Ga0126381_1044552432	3300010376	Tropical Forest Soil	HTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR*
Ga0134122_106994122	3300010400	Terrestrial Soil	DRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0124844_11404141	3300010868	Tropical Forest Soil	VGRHTREAYVDPKTNLIYVTDGNGGGVTVLRYTGPMPQ
Ga0137393_116187862	3300011271	Vadose Zone Soil	QRGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR*
Ga0137388_112624492	3300012189	Vadose Zone Soil	HTREPYPDWDSDLIYVTDGNGGGLTALRYIGPLPTKPPIPGVR*
Ga0137388_113754722	3300012189	Vadose Zone Soil	YPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR*
Ga0137388_118618401	3300012189	Vadose Zone Soil	PGQKGRHTREPYPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGIR*
Ga0137378_105232091	3300012210	Vadose Zone Soil	NDRQTREIFQDPATGLLYLTDGNGGGLMVLRYTGPVPDRPPIPGAR*
Ga0137386_108184841	3300012351	Vadose Zone Soil	PRFGSPGRNDRQTREIFQDPATGLLYLTDGNGGGLMVLRYTGPVPDRPPIPGAR*
Ga0137384_103006992	3300012357	Vadose Zone Soil	DRQTREIFQDPATGLLYLTDGNGGGLMVLRYTGPVPDRPPIPGAR*
Ga0137375_112602791	3300012360	Vadose Zone Soil	MGRHTREPYPDWNSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGVR*
Ga0137361_116787551	3300012362	Vadose Zone Soil	KDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0137413_100267583	3300012924	Vadose Zone Soil	DRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0137404_119458451	3300012929	Vadose Zone Soil	TARKDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0126375_111414271	3300012948	Tropical Forest Soil	PKTNLIYVSDGNGGGVTVLRYTGPLPPRAPMPGAR*
Ga0164299_112099692	3300012958	Soil	GIEVPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGALPTRPPIPGVR*
Ga0164301_102135081	3300012960	Soil	TGAPGRNDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPQNPPIPGGR*
Ga0126369_114550661	3300012971	Tropical Forest Soil	RKDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR*
Ga0157370_106779102	3300013104	Corn Rhizosphere	VFRHAREEFEDPTTGLIYMTDGNGGGLTVLRYTGPVPRNPPLPGAR*
Ga0157374_106362593	3300013296	Miscanthus Rhizosphere	PKYASWGYVDRQTREVFQDPDTNLIYVTDGTGGGLTVLEWTGPIPKHPPIPGSR*
Ga0157372_112546951	3300013307	Corn Rhizosphere	DPTTGLIYMTDGNGGGLTVLRWTGPVPRNPPLPGAR*
Ga0134075_105109952	3300014154	Grasslands Soil	RHTREIFQDPDTGLLYLTDGNGGGLMVLRYTGPIPQRLPVPGAR*
Ga0182015_106595151	3300014495	Palsa	VFQDPSSNLLYITDGNGGGLTVLRYTGPTPEHPPLPGAR*
Ga0182008_104719981	3300014497	Rhizosphere	AYVDPASGLVYVTDGNNGGVTILRYTGPMPQHPPLPGVR*
Ga0182030_113798981	3300014838	Bog	LSPRYAAPGRGDRQTREIFQDPATDLLYVTDGNGGGLAVLRYTGPIPEHPPIPGAR*
Ga0132256_1013435691	3300015372	Arabidopsis Rhizosphere	GLVDRHTREVFQDPDTNLIYVTDGNGGGLTVLEWTGPIPKHPPIPGAR*
Ga0132257_1008269201	3300015373	Arabidopsis Rhizosphere	VDISNPFAPKFVGYYLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR*
Ga0182036_115993352	3300016270	Soil	REPYPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGVR
Ga0182032_105557601	3300016357	Soil	QTRETFQDLRTGLIYMTDGNGGGLTVLRWTGRIPARPPIPGAR
Ga0182038_112915321	3300016445	Soil	GQKGRHTREPYPDWDSDLIYVTDGNGGGLTALRYTGPLPTKPPIPGVR
Ga0187825_102895841	3300017930	Freshwater Sediment	PQQAGRHTREAYTDPTTNLIYVTDGNGGGVTVLRYTGPMPSRPPIPGGAR
Ga0184638_13326831	3300018052	Groundwater Sediment	TSARRDRHTREIFQDPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR
Ga0184627_102699562	3300018079	Groundwater Sediment	EIFQDPDTGLLYLTDGNGGGLMVLRYTGPIPTRLPIPGAR
Ga0066662_118575712	3300018468	Grasslands Soil	PTSTARKDRHTREIFQDPETGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR
Ga0190270_123109382	3300018469	Soil	DVPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPSRPPIPGVR
Ga0190274_103174931	3300018476	Soil	REIFQDPYTGLLYLTDGNGAGLMVLRYTGPIPDKHPLPGGR
Ga0210387_117872191	3300021405	Soil	TREIWQDETTGLIWMTDGNGGGVTALRWTGAIPRHPPLPGAR
Ga0212128_108207891	3300022563	Thermal Springs	HTREAYVDPATNLIYVTDGNGGGVTVLRYTGPIPQRPPIPGAR
Ga0256344_10098671	3300024860	Freshwater	RFASPGRKDRHTREIWQDPKTDLLYVTDGNGGGLTVLRYTGPIPANAPSPGAR
Ga0207680_107188782	3300025903	Switchgrass Rhizosphere	FQDPDTNLIYVTDGNGGGLTVLEWTGPIPKHPPIPGAR
Ga0207680_108318541	3300025903	Switchgrass Rhizosphere	PDRIGRQTREAYQDPATGLIYLSDGNGGGITVLRWTGPIPADPLPGAR
Ga0207695_106340541	3300025913	Corn Rhizosphere	EEFQDPTTGLIYMTDGNGGGLTVLRWTGPIPPNPPLPGAR
Ga0207662_111461092	3300025918	Switchgrass Rhizosphere	FQAPDTGLLYLTDGNGAGLMVLRYTGPIPDKAPIPGGR
Ga0207704_115248702	3300025938	Miscanthus Rhizosphere	YLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR
Ga0207648_118708833	3300026089	Miscanthus Rhizosphere	QTREVFQDPDTNLIYVTDGNGGGLTVLEWTGPIPKHPPIPGAR
Ga0209468_10833052	3300026306	Soil	EVYQDPATGLIYMTDGNGGGLTVLRWTGPVPSKPPIPGAR
Ga0209761_11632312	3300026313	Grasslands Soil	VFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGVR
Ga0209802_10935113	3300026328	Soil	TSPYADSALDRHTREVFVDPDTNLVYVTDGNGGGLTVLKYTGPIPERAPIPGVR
Ga0209465_102841952	3300027874	Tropical Forest Soil	HTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPAKPPIPGVR
Ga0268266_114053462	3300028379	Switchgrass Rhizosphere	REVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR
Ga0307290_100018106	3300028791	Soil	YPDWDSDLIYVTDGNGGGLTVLRYTGALPSRPPIPGVR
Ga0307294_102660892	3300028810	Soil	FGIEVPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGALPSRPPIPGVR
Ga0302263_104460112	3300028869	Fen	QDPDTNLLYVTDGNGGGLTVLRYTGPIPKDPPLPGAR
Ga0311327_107050121	3300029883	Bog	LSPRFAGPGKADRETREIFQDPDTNLLYVTDGNGGGLTVLRYTGPIPKNPPLPGAR
Ga0311361_102582071	3300029911	Bog	PRFAGPGKADRETREIFQDPDTNLLYVTDGNGGGLTVLRYTGPIPKNPPLPGAR
Ga0302276_102835971	3300029992	Bog	QDPDTNLLYVTDGNGGGLTVLRYTGPIPKNPPLPGAR
Ga0307500_101621401	3300031198	Soil	VPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGALPSRPPIPGVR
Ga0302323_1001282112	3300031232	Fen	DRETREIFQDPDTNLLYVTDGNGGGLTVLRYTGPIPKDPPLPGAR
Ga0265340_101728862	3300031247	Rhizosphere	KADRETREIFQDPDTNLLYVTDGNGGGLTVLRYTGPIPKDPPLPGAR
Ga0272432_10165517	3300031470	Rock	PDTNLLYATDGNGGGLTVLRYTGPIPKDPPIPGAR
Ga0310915_106996021	3300031573	Soil	VPGQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPTPGVR
Ga0306921_123168943	3300031912	Soil	GRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR
Ga0310910_105235472	3300031946	Soil	PFLPREIGYYLSPPYGGGGNVGRHTREVFQDRDTGLVYTTDGNGGGLTVLRWTGPIPEHPPIPGAR
Ga0307409_1016467331	3300031995	Rhizosphere	VDRQTREVFQDPETNLIYVTDGNGGGLTVLEWTGPIPKHPPIPAAR
Ga0310902_108733872	3300032012	Soil	FVGYYLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGA
Ga0310906_103423792	3300032013	Soil	DPDTSLLYLTDGNGGGLMVLRYTGPMPTRLPIPGAR
Ga0310911_108100212	3300032035	Soil	PPGGAGRQTRETYQDPDTGLIYMSDGNGGGLTVLRWMGRIPENPPIPGAR
Ga0318505_101384791	3300032060	Soil	GRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPTPGVR
Ga0310890_115420161	3300032075	Soil	GPVNIHTVRHTREIFQDPDTDLLYLTDGNGGGLMVLRYTGPIPTRLPIPGAR
Ga0307472_1014648102	3300032205	Hardwood Forest Soil	DRHTRDIFQDPDTGLLYVTDGNGGGLMVLRYTGPIPDLPPIPGGR
Ga0307472_1027743712	3300032205	Hardwood Forest Soil	TREIFQDPDTNLLYATDGNGGGLMVLRYTGPIPERPPIPGGR
Ga0310812_102102112	3300032421	Soil	PKFVGYYLSPKYASWENDDRRTREVGQDPTTNLIYITDGNGGGLTVLRYTGPIPATPPLPGAR
Ga0310914_105356802	3300033289	Soil	GQKGRHTREPYPDWDSDLIYVTDGNGGGLTVLRYTGPLPTKPPIPGVR
Ga0334940_023028_1_138	3300034025	Biocrust	TGRQTREVAQDPDTGLIYVTDGNGGGLTVLRYTGALPPSPMPAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047736

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences