Metagenome / Metatranscriptome Family F047700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	49 residues
Representative Sequence	MIGAALALIVIGVIFLFIIPWVGIAAGIVGVILLVLFLAGFGRRAAEGRP
Number of Associated Samples	105
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	85.23 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (17.450 % of family members)
Environment Ontology (ENVO)	Unclassified (37.584 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.28% β-sheet: 0.00% Coil/Unstructured: 48.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00171	Aldedh	51.68
PF12773	DZR	10.74
PF13248	zf-ribbon_3	8.05
PF13240	zinc_ribbon_2	2.68
PF01391	Collagen	2.01
PF07883	Cupin_2	0.67
PF00486	Trans_reg_C	0.67
PF13280	WYL	0.67
PF00108	Thiolase_N	0.67
PF07332	Phage_holin_3_6	0.67
PF00903	Glyoxalase	0.67
PF05974	DUF892	0.67
PF13646	HEAT_2	0.67
PF00753	Lactamase_B	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	51.68
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	51.68
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	51.68
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.67
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.15 %
Unclassified	root	N/A	26.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.15 %
Unclassified	root	N/A	26.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.15 %
Unclassified	root	N/A	26.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.24 %
Unclassified	root	N/A	26.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.20 %
Unclassified	root	N/A	26.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.01 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.34 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.34 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.34 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.34 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_109892515	Not Available	613	Open in IMG/M
3300000956\|JGI10216J12902_109892516	Not Available	829	Open in IMG/M
3300000956\|JGI10216J12902_119713478	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300002568\|C688J35102_118862437	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300002568\|C688J35102_119722061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	758	Open in IMG/M
3300002568\|C688J35102_120481115	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300002568\|C688J35102_120638043	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300002568\|C688J35102_120758788	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300002568\|C688J35102_120784323	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300002568\|C688J35102_120977422	All Organisms → cellular organisms → Bacteria	4351	Open in IMG/M
3300004114\|Ga0062593_103295642	Not Available	518	Open in IMG/M
3300004153\|Ga0063455_100401725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300004643\|Ga0062591_100205451	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005093\|Ga0062594_102298586	Not Available	586	Open in IMG/M
3300005093\|Ga0062594_103115138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005167\|Ga0066672_10470535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300005167\|Ga0066672_10690776	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005171\|Ga0066677_10302064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	915	Open in IMG/M
3300005171\|Ga0066677_10381125	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005176\|Ga0066679_10294435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300005177\|Ga0066690_10439338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300005181\|Ga0066678_10935074	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005187\|Ga0066675_11092499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300005332\|Ga0066388_103653090	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005343\|Ga0070687_100168841	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300005354\|Ga0070675_101596550	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005356\|Ga0070674_101236843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300005365\|Ga0070688_100319881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300005437\|Ga0070710_10580298	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005439\|Ga0070711_101711232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300005454\|Ga0066687_10600603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300005544\|Ga0070686_100342207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300005557\|Ga0066704_11032513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300005564\|Ga0070664_101106266	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005576\|Ga0066708_10342531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300005576\|Ga0066708_10379382	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005577\|Ga0068857_102189478	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005587\|Ga0066654_10226281	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005618\|Ga0068864_101154677	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005985\|Ga0081539_10005502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12866	Open in IMG/M
3300006049\|Ga0075417_10134179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1144	Open in IMG/M
3300006058\|Ga0075432_10218853	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006358\|Ga0068871_101014941	All Organisms → cellular organisms → Bacteria → Terrabacteria group	773	Open in IMG/M
3300006794\|Ga0066658_10345354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300006800\|Ga0066660_10488768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300006806\|Ga0079220_10136012	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300006844\|Ga0075428_100948157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300006846\|Ga0075430_101003714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300006854\|Ga0075425_100045655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4896	Open in IMG/M
3300006881\|Ga0068865_100835941	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300007076\|Ga0075435_100810904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300009012\|Ga0066710_100397047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2054	Open in IMG/M
3300009012\|Ga0066710_102029698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300009094\|Ga0111539_10334822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1762	Open in IMG/M
3300009101\|Ga0105247_10721766	Not Available	752	Open in IMG/M
3300009137\|Ga0066709_102534818	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009147\|Ga0114129_12237571	Not Available	657	Open in IMG/M
3300009162\|Ga0075423_11011296	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300009789\|Ga0126307_10003476	All Organisms → cellular organisms → Bacteria	10788	Open in IMG/M
3300009789\|Ga0126307_10015192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5695	Open in IMG/M
3300009840\|Ga0126313_10023173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4157	Open in IMG/M
3300009840\|Ga0126313_10057914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2753	Open in IMG/M
3300009840\|Ga0126313_10065271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2605	Open in IMG/M
3300009840\|Ga0126313_10414958	Not Available	1069	Open in IMG/M
3300009840\|Ga0126313_11310214	Not Available	599	Open in IMG/M
3300010036\|Ga0126305_10443920	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300010038\|Ga0126315_10011278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4246	Open in IMG/M
3300010038\|Ga0126315_10418319	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010039\|Ga0126309_10000509	All Organisms → cellular organisms → Bacteria	13028	Open in IMG/M
3300010039\|Ga0126309_10330811	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300010039\|Ga0126309_10424262	Not Available	801	Open in IMG/M
3300010039\|Ga0126309_11211186	Not Available	519	Open in IMG/M
3300010039\|Ga0126309_11232714	Not Available	515	Open in IMG/M
3300010039\|Ga0126309_11262624	Not Available	510	Open in IMG/M
3300010041\|Ga0126312_10114775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1851	Open in IMG/M
3300010041\|Ga0126312_11148961	Not Available	571	Open in IMG/M
3300010041\|Ga0126312_11149659	Not Available	571	Open in IMG/M
3300010041\|Ga0126312_11382153	Not Available	522	Open in IMG/M
3300010042\|Ga0126314_10242384	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300010042\|Ga0126314_10900350	Not Available	654	Open in IMG/M
3300010044\|Ga0126310_11122177	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010044\|Ga0126310_11532854	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010045\|Ga0126311_10046462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2768	Open in IMG/M
3300010047\|Ga0126382_11306051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300010375\|Ga0105239_11396921	Not Available	808	Open in IMG/M
3300011332\|Ga0126317_10972732	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300012198\|Ga0137364_11178558	Not Available	574	Open in IMG/M
3300012204\|Ga0137374_10000192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55258	Open in IMG/M
3300012204\|Ga0137374_10016402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8508	Open in IMG/M
3300012204\|Ga0137374_11155635	Not Available	546	Open in IMG/M
3300012208\|Ga0137376_10535109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300012208\|Ga0137376_11057453	Not Available	694	Open in IMG/M
3300012212\|Ga0150985_107222302	Not Available	684	Open in IMG/M
3300012212\|Ga0150985_115749658	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012212\|Ga0150985_119150846	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012350\|Ga0137372_10230338	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300012355\|Ga0137369_10209234	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300012355\|Ga0137369_10609214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300012469\|Ga0150984_107573465	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012469\|Ga0150984_119402513	Not Available	1141	Open in IMG/M
3300012532\|Ga0137373_11002318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012903\|Ga0157289_10341023	Not Available	544	Open in IMG/M
3300012915\|Ga0157302_10005286	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300012976\|Ga0134076_10275153	Not Available	724	Open in IMG/M
3300015200\|Ga0173480_10048361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1904	Open in IMG/M
3300015201\|Ga0173478_10429480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300015371\|Ga0132258_10678339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2593	Open in IMG/M
3300015371\|Ga0132258_13016374	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300015371\|Ga0132258_13686991	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300015372\|Ga0132256_103597853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300015373\|Ga0132257_101325552	Not Available	914	Open in IMG/M
3300018027\|Ga0184605_10003277	All Organisms → cellular organisms → Bacteria	5585	Open in IMG/M
3300018027\|Ga0184605_10009692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3641	Open in IMG/M
3300018027\|Ga0184605_10023060	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300018051\|Ga0184620_10145706	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300018482\|Ga0066669_11314558	Not Available	654	Open in IMG/M
3300019255\|Ga0184643_1368862	Not Available	697	Open in IMG/M
3300019361\|Ga0173482_10183028	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300021445\|Ga0182009_10052140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1734	Open in IMG/M
3300022901\|Ga0247788_1063727	Not Available	697	Open in IMG/M
3300025925\|Ga0207650_11722253	Not Available	531	Open in IMG/M
3300025926\|Ga0207659_10830357	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300025932\|Ga0207690_10814914	Not Available	772	Open in IMG/M
3300025935\|Ga0207709_10532124	All Organisms → cellular organisms → Bacteria → Terrabacteria group	922	Open in IMG/M
3300025937\|Ga0207669_11285745	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025941\|Ga0207711_10784016	All Organisms → cellular organisms → Bacteria → Terrabacteria group	888	Open in IMG/M
3300026116\|Ga0207674_11925583	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300026312\|Ga0209153_1292687	Not Available	521	Open in IMG/M
3300026322\|Ga0209687_1136422	Not Available	789	Open in IMG/M
3300027748\|Ga0209689_1121546	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300027873\|Ga0209814_10184389	Not Available	900	Open in IMG/M
3300027909\|Ga0209382_11504402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300028587\|Ga0247828_10830389	All Organisms → cellular organisms → Bacteria → Terrabacteria group	589	Open in IMG/M
3300028722\|Ga0307319_10334191	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300028744\|Ga0307318_10210865	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300028880\|Ga0307300_10064816	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031058\|Ga0308189_10184875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300031548\|Ga0307408_100689674	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031901\|Ga0307406_11170275	Not Available	666	Open in IMG/M
3300031938\|Ga0308175_100275543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1702	Open in IMG/M
3300031938\|Ga0308175_101750924	Not Available	696	Open in IMG/M
3300031938\|Ga0308175_102865862	Not Available	538	Open in IMG/M
3300031939\|Ga0308174_10629572	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031995\|Ga0307409_100301746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1490	Open in IMG/M
3300031995\|Ga0307409_101888550	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031996\|Ga0308176_11749381	Not Available	663	Open in IMG/M
3300032002\|Ga0307416_100122160	Not Available	2324	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.14%
Host-Associated	Host-Associated	28.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.11%
Plants	Host-Associated → Plants	28.86%
Aquatic	Environmental → Aquatic	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.05%
Sediment	Environmental → Aquatic → Sediment	2.68%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.42%
Loam	Environmental → Terrestrial → Soil → Loam	11.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.01%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.34%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1098925152	3300000956	Soil	MFAAALALIVIGLLFFFILPWVGILAGIVGLALLALFLAGVGRGAAESSP*
JGI10216J12902_1098925161	3300000956	Soil	MFAAALALIVIGVLFFFIFPWVGILAGIVGLALLALFLAGIGRGAVESRP*
JGI10216J12902_1197134781	3300000956	Soil	MLGAALALIVLGVIFLFILPWVGIAAGLVGLVLLIMFFAGF
C688J35102_1188624371	3300002568	Soil	MIGVAMALIVLGVLLLFIVPWVGIAAGVVGIVLAVLFLFGVGRGAVEAAAEAEPRA*
C688J35102_1192496282	3300002568	Soil	MIGVALALIVVGVGLFFLVPFVGIPIGAVGLLLAVLYLVGFGRRAAEG
C688J35102_1197220612	3300002568	Soil	MIGAALALIVIGLIFLFIFPWVGIAAGIVGLILLGLFLAGFGKRAAEGRP*
C688J35102_1204811153	3300002568	Soil	MIGAALALILLGVIFLFIVPWVGLGAGIVGVILLVLFLAGFGRRAAEGSS*
C688J35102_1206380431	3300002568	Soil	MIGVALALIVAGVVLLFIIPFVGIAAGLVGLILAVLYLAGVGRRAAEPRT*
C688J35102_1207587881	3300002568	Soil	MIGVALALIVAGVVLLFIIPWVGIAAGLVGLILALLYAVGVGRRAAEPGT*
C688J35102_1207843232	3300002568	Soil	MIGVALALIVVGVFLLFIIPWVGIAAGVVGLILALLYVAGVGRRAAEPGT*
C688J35102_1209774224	3300002568	Soil	MVGIALALIVLGVILLFIIPWVGIAAGIVGLILGILYVAGVGRRAAEPRT*
Ga0062593_1032956422	3300004114	Soil	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0063455_1004017251	3300004153	Soil	ALALIVAGVVLLFIIPFVGIAAGIVGLILALLYVVGVGRRAAEPRT*
Ga0062591_1002054512	3300004643	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0062594_1022985862	3300005093	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLVLFLAG
Ga0062594_1031151381	3300005093	Soil	VLGVILLFVIPWVGIAAGVVGVILAVLALLGIGRRAVEPTADPEPRA*
Ga0066672_104705351	3300005167	Soil	MIGLALALVVLGVILLFVIPWVGIAAGIVGLILMVLYAAGVRRRTAQPNP*
Ga0066672_106907762	3300005167	Soil	VIGIALALVVLGVIFLFIVPWVGIAVGVVGLILAGLFVAGFGRRATSEHRF*
Ga0066677_103020642	3300005171	Soil	VIGVAAALIVVGLVLTFLMPWVGIPVGIVGLVLALLFLAGFGRRAAEPGP*
Ga0066677_103811252	3300005171	Soil	VIGIALALVVLGVIFLFIVPWVGIAVGVVGLILAGLFVAGFGRRATSAHRF*
Ga0066679_102944352	3300005176	Soil	MIGVALALVVIGVLLLFLVPWVGMAAGIVGLILVVLYAAGVGRRAARI*
Ga0066690_104393381	3300005177	Soil	VIELALAIVVIGVIFLFVFPWVGIAVGIVGLVLAGLFIAGFGRRATSEHRF*
Ga0066678_109350742	3300005181	Soil	MIGLALALVILGVILLFVIPWVGIAAGLVGLILMVLYAAGVGRRTAQPNP*
Ga0066675_110924991	3300005187	Soil	VIGLALAMVVIGVIFLFVFPWVGIAVGVVGLVLACLFIAGFGRRATSEHRF*
Ga0066388_1036530903	3300005332	Tropical Forest Soil	MIGVALALIAFGVVLPFFIPWRGLAVGIVGLILAVLSVAGVGRRAAHPRT*
Ga0070687_1001688412	3300005343	Switchgrass Rhizosphere	MIGAALALIVIGVILLFIIPWVGIAAGIVGAILLVLFLAGFGKRAAEGRP*
Ga0070675_1015965501	3300005354	Miscanthus Rhizosphere	ALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0070674_1012368431	3300005356	Miscanthus Rhizosphere	MIGAAVALIVIGLIFLFIFPWVGIAAGIVGLILLGLFLAGFGKRAAEGRP*
Ga0070688_1003198811	3300005365	Switchgrass Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRR
Ga0070710_105802981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLFAAIGLIVLGVLLLFLVPWVGVAAGIVGLILVVLYLVGVGRRVAETETG*
Ga0070711_1017112322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIGVALALVVAGVVLLFIIPWIGIAAGLVGLILALLYAVGIGRRAAEPGT*
Ga0066687_106006032	3300005454	Soil	MIGVAIALIVAGVVLLFIIPWVGIAAGIVGLILALLYVAGVGRRAAEPGT*
Ga0070686_1003422072	3300005544	Switchgrass Rhizosphere	MIGAALALIVIGLIFLFIFPWIGIAAGIVGLILLGLFLAGFGKRAAEGRP*
Ga0066704_110325132	3300005557	Soil	VIGLALAIVVIGVIFLFVFPWVGIAVGIVGLVLAGLFIAGFGRRATSEHRF*
Ga0070664_1011062662	3300005564	Corn Rhizosphere	MIGVALALVVIGVFLLFIIPWVGIAAGIVGLLLALAYLLGVGRRAAEPRT*
Ga0066708_103425312	3300005576	Soil	MGQNTLMIGVALALVVLGVILLFIIPWVGIAAGIAGLILLVLYAAGVGRRAVHPRT*
Ga0066708_103793822	3300005576	Soil	MIGVAFALIVVGVILLFIIPWVGIAAGVIGLILAILYIAGIGRRAVEPNA*
Ga0068857_1021894782	3300005577	Corn Rhizosphere	LIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0066654_102262813	3300005587	Soil	MIGVALALIVAGVVLLFIIPWVGMAAGLVGLILALLYAVGVGRRAAEPRT*
Ga0068864_1011546772	3300005618	Switchgrass Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAA*
Ga0081539_1000550210	3300005985	Tabebuia Heterophylla Rhizosphere	MIGLALALVVVGVVLLFLIPWVGIPVGILGLLLAIAYVFGVGRRAAEPTEPRA*
Ga0075417_101341791	3300006049	Populus Rhizosphere	MIGLGIALVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGR
Ga0075432_102188532	3300006058	Populus Rhizosphere	MIGAALALIVIGVIFLFIIPWVGIAAGIVGAILLVLFLAGFGKRAAEGRP*
Ga0068871_1010149412	3300006358	Miscanthus Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEG
Ga0066658_103453542	3300006794	Soil	MIGVAIALIVAGVVLLFIIPWVGIAAGIVGLILALLYAVGVGRRAAEPRT*
Ga0066660_104887681	3300006800	Soil	DRASMIGAAAALIVIGVVFFFIVPWVGIVAGVVGVLLLVLFALGFGRRAAEGRP*
Ga0079220_101360123	3300006806	Agricultural Soil	AAALALIVIGILFFFIFPWVGILAGLVGIALLVLFLAGAGRDAAESRP*
Ga0075428_1009481572	3300006844	Populus Rhizosphere	MIGLGIALVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGRRAVEPTEPRV*
Ga0075430_1010037141	3300006846	Populus Rhizosphere	LVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGRRAVEPTEPRA*
Ga0075425_1000456555	3300006854	Populus Rhizosphere	MFAAALALIVIGILFFFIFPWVGILAGLVGIALLVLFLAGAGRDAAESRP*
Ga0068865_1008359411	3300006881	Miscanthus Rhizosphere	RDGNTPTMIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0075435_1008109042	3300007076	Populus Rhizosphere	MIGLGIALVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGRRAVEPTEPRA*
Ga0066710_1003970472	3300009012	Grasslands Soil	MIGLALALVILGVILLFVIPWVGIAAGLVGLILMVLYAAGVGRRTAQPNP
Ga0066710_1020296982	3300009012	Grasslands Soil	MIGVALALVVIGVLLLFLVPWVGMAAGIVGLILVVLYAAGVGRRAARI
Ga0111539_103348221	3300009094	Populus Rhizosphere	MIGVALALIVIGVIFIFIVPWVGLAAGAVGIVLFVLFLAGVGKRATEGGP*
Ga0105247_107217662	3300009101	Switchgrass Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLLLFLAGFGRRAAEGRP*
Ga0066709_1025348182	3300009137	Grasslands Soil	MIGAALALIVVGIVFFFIVPWVGIVAGVVGVALFLLFLAGFGRRAAEGRP*
Ga0114129_122375711	3300009147	Populus Rhizosphere	MIGAALVLIVLGVIFIFIVPWVGIAAGAVGLVLFVLFLA
Ga0075423_110112962	3300009162	Populus Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLSGFGRRAAEGRP*
Ga0126307_100034765	3300009789	Serpentine Soil	MLGIALALILFGVVLLFIIPWVGIPVGIVGLLLVLGYLLGAGRRAAEPRA*
Ga0126307_100151923	3300009789	Serpentine Soil	MLGVALALIVVGVVLLFIIPWVGLAAGAVGLLLALGYLLGIGRRAVEPRT*
Ga0126313_100231735	3300009840	Serpentine Soil	MIGVALALIVAGVVLLFIIPWVGIAAGLVGLILALLYAVGIGRRAAEPGT*
Ga0126313_100579144	3300009840	Serpentine Soil	LALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAAESER*
Ga0126313_100652717	3300009840	Serpentine Soil	MVGAALALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAA
Ga0126313_104149581	3300009840	Serpentine Soil	LALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAAQSER*
Ga0126313_113102141	3300009840	Serpentine Soil	MIGLALALVVIGVFLLFLIPWVGIPVGIVGLLLAVGYLLGIGRRAAEPRA*
Ga0126305_104439203	3300010036	Serpentine Soil	MIGVAIALIVAGVVLLFIIPWVGIAAGLVGLILALLYAVGIGRRAAEPGT*
Ga0126304_104871361	3300010037	Serpentine Soil	MIGLALALIVVGVGLLFLVPWIGIPIGAVGLLLAVLYLVGF
Ga0126315_100112782	3300010038	Serpentine Soil	MVGAALALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAAQSER*
Ga0126315_104183192	3300010038	Serpentine Soil	MIGAALALIVIGVIFLFIIPWVGIAAGIVGVILLVLFLAGFGRRAAEGRP*
Ga0126309_1000050916	3300010039	Serpentine Soil	VLGVAIALVVLGVVLLFIIPWVGIPAGILGLLLLIAYVAGIGRRAEREQA*
Ga0126309_103308113	3300010039	Serpentine Soil	MIGVALALIVIGIVLLFLMPWVGIPVGIVGLLLALGYLFGIGRRAAEPNP
Ga0126309_104242622	3300010039	Serpentine Soil	MIGVALALIVVGVVLLFIIPWVGIAAGIVGLILAILYFAGVGRRAAEPNP*
Ga0126309_112111861	3300010039	Serpentine Soil	MLGLALALIVVGVILLFIIPWVGIPVGVVGLLVALGYLLGIGRRAAEPRT*
Ga0126309_112327141	3300010039	Serpentine Soil	MIGVGLALIVIGVVLLFIIPWVGIAAGIVGLILAILYLAGVGRRAAEPRA
Ga0126309_112626241	3300010039	Serpentine Soil	MLGVALALIVLGVVLLFIIPWVGIAAGLVGLILAILYVLGIGRRAAE
Ga0126312_101147751	3300010041	Serpentine Soil	ALALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAAESER*
Ga0126312_111489612	3300010041	Serpentine Soil	MIGLALALIVVGVVLLFIIPWIGIAAGIVGLILAILYLAGIGRRAAEPN
Ga0126312_111496592	3300010041	Serpentine Soil	MIGVALALIVIGVILLFLIPWVGIPVGIIGLLLALGYVFGIGRRAAEPNP*
Ga0126312_113821531	3300010041	Serpentine Soil	MIGAALALIVLGIIFIFIVPWVGIAAGVVGLVLLVLFLAGFGKRAAEGRP*
Ga0126314_102423842	3300010042	Serpentine Soil	MIGAALALIVIGLILLFIIPWVGIAAGIVGAILLVLFLAGFGRRAAEGRP*
Ga0126314_109003501	3300010042	Serpentine Soil	MVGAALALVVIGVVFLFVIPWVGIAVGIVGVALFIAFLAGFGRRAAESER*
Ga0126310_111221772	3300010044	Serpentine Soil	MLGVAIAMIVVGVVLLFLFPWGGILAGAVGLLLLIAYFFGIGKRAVEDSPRA*
Ga0126310_115328542	3300010044	Serpentine Soil	MLGLALALIVIGVVLLFIIPWVGIPVGIVGLLVALGYLLGIGRRAAEPRT*
Ga0126311_100464624	3300010045	Serpentine Soil	MLGVALALIVIGVVLLFIIPWVGLAAGAVGLLLALGYLLGIGRRAVEPRT*
Ga0126382_113060512	3300010047	Tropical Forest Soil	MIGAALVLIVLGIILIFIVPWVGIAAGAVGLVLLVLFLAGFGKRAAEERP*
Ga0105239_113969212	3300010375	Corn Rhizosphere	MIGLGIALVVIGVLLLFIIPWVGIAVGIVGLLLAISYAFGVGRRAVEPTEPRA*
Ga0126317_109727321	3300011332	Soil	LALIVLGVIFLFIVPWVGLAAGIVGVILLVLFLAGFGRRAAEGSS*
Ga0137364_111785582	3300012198	Vadose Zone Soil	MIGLALALVVLGVILLFVIPWVGSAARIVGLILMVLYAAGAARRTAQPTP*
Ga0137374_1000019214	3300012204	Vadose Zone Soil	VLPAALALIVIGLILLFVIPWLGLAAGIVGVLLLIGFAAGIGRRAAREPRP*
Ga0137374_100164026	3300012204	Vadose Zone Soil	MIGIALALVIIGVVLLFIIPWVGIPVGIVGLLLALGYLFGIGRRAAEPNP*
Ga0137374_111556352	3300012204	Vadose Zone Soil	MIGVALALIVVGVVLLFLIPWVGIAAGLVGLILAILYIAGIGRRAAEPNA*
Ga0137376_105351092	3300012208	Vadose Zone Soil	MIGLALALVVLGVILLFVIPWVGIAAGIVGLILMVLYAAGVGRRTAQPNP*
Ga0137376_110574532	3300012208	Vadose Zone Soil	MIGIALALIVIGVVLLFLIPWVGVPVGIVGLVLALLYLAGVGRRATDPTA*
Ga0150985_1072223022	3300012212	Avena Fatua Rhizosphere	MLFAAIGLVVLGLLLLFIVPFVGIAAGIVGLILVVLYLVGIGRRVAETESG*
Ga0150985_1157496581	3300012212	Avena Fatua Rhizosphere	ALLVVGLVLLFIVPWVGIPLAIVGAVIAVVYLMGFGRRTAAANRP*
Ga0150985_1191508462	3300012212	Avena Fatua Rhizosphere	MIGVALALIVAGVVLLFIIPWVGMAAGLVGLILALLYAVGVGRRAAEPGT*
Ga0137372_102303382	3300012350	Vadose Zone Soil	MIGVAVALVLVGVVLLFLIPWVGIAAGIVGLVLAILYFAGVGRRAAHPRT*
Ga0137369_102092342	3300012355	Vadose Zone Soil	VLPAALALIVIGLILLFVIPWVGLAAGIVGVLLLIGFAAGIGRRAAREPRP*
Ga0137369_106092141	3300012355	Vadose Zone Soil	GVALALIVIGVVLLFLIPWVGIPVGIVGLLLALGYLFGLGRRAAEPNP*
Ga0150984_1075734651	3300012469	Avena Fatua Rhizosphere	VRMIGVALALIVVGVFLLFIIPWVGIAAGVVGLILALLYVAGVGRRAAEPGT*
Ga0150984_1194025131	3300012469	Avena Fatua Rhizosphere	MVGIALALIVLGVILLFIIPWVGIAAGIVGLILGILYVAGVGR
Ga0137373_110023182	3300012532	Vadose Zone Soil	MIGVALALIVVGIVLLFLIPWVGIAAGLVGLILAILYIAGIGRRAAEPNA*
Ga0157289_103410231	3300012903	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLVLFFAGFGRRAAA
Ga0157302_100052864	3300012915	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEAGRSPNRLVL*
Ga0134076_102751533	3300012976	Grasslands Soil	ALIVAGVVLLFIIPWVGIAAGIVGLILALLYVAGVGRRAAEPGT*
Ga0173480_100483613	3300015200	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLALFLAGFGRRAAEGRP*
Ga0173478_104294802	3300015201	Soil	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRA
Ga0132258_106783393	3300015371	Arabidopsis Rhizosphere	MIGLWIALIVIGVVLLFLIPWVGIAVGIVGLLLAIAYAFGVGRRAVETTEPSA*
Ga0132258_130163742	3300015371	Arabidopsis Rhizosphere	MIGAALALIVIGVILLFIIPWVGIAAGIVGAILLVLFLAGFGRRAAEGRP*
Ga0132258_136869912	3300015371	Arabidopsis Rhizosphere	MIGVALALIALGVILLFLIPWVGIAAGVVGLILALLYVAGIGRRAAEPRT*
Ga0132256_1035978532	3300015372	Arabidopsis Rhizosphere	MIGLGIALIVIGVVLLFLIPWVGIAVGIVGLLLAIAYAFGVGRRAVEPTEPRA*
Ga0132257_1013255522	3300015373	Arabidopsis Rhizosphere	MIGVALALVVLGVILLFLIPWVGIGAGIVGLILAILFVAGIGRRAAEP
Ga0184605_100032774	3300018027	Groundwater Sediment	MIGAALALIVIGVVFIFIVPWVGIAAGAVGVVLLVLFLLGFGKRAAEGRP
Ga0184605_100096922	3300018027	Groundwater Sediment	MIGAALALIVIGAVFLFIVPWVGIIVGIVGVVLLALFLLGFGRRAAEGRP
Ga0184605_100230602	3300018027	Groundwater Sediment	MIGAALALIVIAVIFFFIVPWVGIAAGIVGLILLVLFLAGFGRRAAEGRP
Ga0184620_101457062	3300018051	Groundwater Sediment	MIGAALALIVIGVIFLFIVPWVGIAVGVVGVILLALFLLGFGRRAAEGRPSGLVI
Ga0066669_113145581	3300018482	Grasslands Soil	VIGLALAMVVIGVIFLFVFPWVGIAVGVVGLVLACLFIAGFGRRATSEHRF
Ga0184643_13688622	3300019255	Groundwater Sediment	MIGAALALIVIGVVFIFIVPWVGIAAGAVGVVLLVLFLLGF
Ga0173482_101830281	3300019361	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP
Ga0182009_100521401	3300021445	Soil	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP
Ga0247788_10637271	3300022901	Soil	MIGAALALIVLGVIFFFIVPFVGIAAGIVGVILLALFLAGFGRRAAEGRP
Ga0207650_117222531	3300025925	Switchgrass Rhizosphere	ALALIVAGVVLLFIIPWVGIAAGVVGLVLALLYVAGVGRRAAEPGT
Ga0207659_108303571	3300025926	Miscanthus Rhizosphere	ALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP
Ga0207690_108149142	3300025932	Corn Rhizosphere	VLGVILLFVIPWVGIAAGVVGVILAVLALLGIGRRAVEPTADPEPRA
Ga0207709_105321241	3300025935	Miscanthus Rhizosphere	MIGAALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAA
Ga0207669_112857452	3300025937	Miscanthus Rhizosphere	MIGAAVALIVIGLIFLFIFPWVGIAAGIVGLILLGLFLAGFGKRAAEGRP
Ga0207711_107840161	3300025941	Switchgrass Rhizosphere	MIGAALALIVIGVILLFIIPWVGIAAGIVGAILLVLFLA
Ga0207674_119255831	3300026116	Corn Rhizosphere	AALALIVLGVIFLFIVPFVGIAAGIVGVILLVLFLAGFGRRAAEGRP
Ga0209153_12926872	3300026312	Soil	MIGVAIALIVAGVVLLFIIPWVGIAAGIVGLILALLYVAGVGRRAAQPGT
Ga0209687_11364222	3300026322	Soil	MIGVAIALIVAGVVLLFIIPWVGIAAGIVGLILALLYVAGVGRRAAEPGT
Ga0209689_11215463	3300027748	Soil	VIGLALAIVVIGVIFLFVFPWVGIAVGIVGLVLAGLFIAGFGRRATSEHRF
Ga0209814_101843891	3300027873	Populus Rhizosphere	MIGLGIALVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGRRA
Ga0209382_115044022	3300027909	Populus Rhizosphere	MIGLGIALVVIGVVLLFIIPWVGIAVGIVGLLLAIAYAFGVGRRAVEPTEPRA
Ga0247828_108303892	3300028587	Soil	MIGVALALIVLGVIFIFIVPWVGLAAGAVGIVLFVLFLAGVGKRPTEGRP
Ga0307319_103341912	3300028722	Soil	MIGAGLALIVIGVIFLFVVPWVGIAVGVVDVILLALFLLGFGKRAAEGRP
Ga0307318_102108652	3300028744	Soil	MIGAALALIVIGLIFLFIFPWVGIAAGIVGLILLGLFLAGFGKRAAEGRP
Ga0307300_100648161	3300028880	Soil	MIGVALALIVAGVVLFFIIPWVGIAAGIVGLLLALLYAAGIGRRAVEPET
Ga0308189_101848751	3300031058	Soil	MIGAALGMVVLGVILLFVFPWVGIPLGVAGLILVVLFLAGFGRRAATGRP
Ga0307408_1006896742	3300031548	Rhizosphere	MLAAALALIVLGVIFFFFLGWFGIIAGIVGVVLLVLFLAGVGRTIAESQP
Ga0307406_111702752	3300031901	Rhizosphere	MLAAALALIVLGVIFFFFLGWFGIIAGIVGVVLLVLF
Ga0308175_1002755432	3300031938	Soil	MIGIALALVVVGVVLLFIIPWIGIPVGIVGLLLAIGYAFGVGRRAAEPHA
Ga0308175_1017509241	3300031938	Soil	MIGVALALIVAGVVLLFIIPWVGIAAGLVGLILALLYAVGIGRRAAEPGT
Ga0308175_1028658622	3300031938	Soil	MIGLALALIVVGVVLLFIIPWVGIPLGIVGLLLAIAYLFGIGRRAAEPGA
Ga0308174_106295722	3300031939	Soil	MIGLALALIIVGVVLLFLIPWVGIPLGIIGLVLAIGYAFGIGRRAAEPGA
Ga0307409_1003017463	3300031995	Rhizosphere	LGVIFFFFLGWFGIIAGIVGVVLLVLFLAGVGRTIAESQP
Ga0307409_1018885502	3300031995	Rhizosphere	MLGVALALIVVGVVLLFIIPWVGLAAGAVGLLLALGYLLGIGRRAVEPRT
Ga0308176_117493812	3300031996	Soil	MIGAALALIVIGVILLFIIPWVGIAAGIVGAILLVLFLAGFGKRAAEGRP
Ga0307416_1001221602	3300032002	Rhizosphere	MLGVALALIVIGVVLLFIIPWVGLAAGAVGLLLALGYLLGIGRRAVEPRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences