Metagenome Family F047546

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047546
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	48 residues
Representative Sequence	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVV
Number of Associated Samples	124
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.97 %
% of genes near scaffold ends (potentially truncated)	98.66 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.477 % of family members)
Environment Ontology (ENVO)	Unclassified (29.530 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.664 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.33% β-sheet: 0.00% Coil/Unstructured: 54.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF08241	Methyltransf_11	2.68
PF00072	Response_reg	2.68
PF13596	PAS_10	2.01
PF07883	Cupin_2	1.34
PF00190	Cupin_1	1.34
PF12697	Abhydrolase_6	1.34
PF02735	Ku	1.34
PF00535	Glycos_transf_2	0.67
PF00083	Sugar_tr	0.67
PF02463	SMC_N	0.67
PF12681	Glyoxalase_2	0.67
PF00903	Glyoxalase	0.67
PF03480	DctP	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.34

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.25 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.56 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.88 %
Unclassified	root	N/A	12.75 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.45 %
Unclassified	root	N/A	12.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.01 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.01 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.34 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.01 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.01 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.34 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.01 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.34 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	1.34 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.68 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.01 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.34 %
Rhizobiales bacterium 62-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	1.34 %
Mesorhizobium sp. L103C131B0	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C131B0	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig84391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100864123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1061875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10073877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1032309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300000890\|JGI11643J12802_12072086	Not Available	832	Open in IMG/M
3300000956\|JGI10216J12902_112378675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300005093\|Ga0062594_100681455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	923	Open in IMG/M
3300005159\|Ga0066808_1018090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300005165\|Ga0066869_10111519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	558	Open in IMG/M
3300005186\|Ga0066676_10711398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300005328\|Ga0070676_10710770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	735	Open in IMG/M
3300005332\|Ga0066388_100515975	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300005332\|Ga0066388_103937748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300005332\|Ga0066388_106279875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300005332\|Ga0066388_106368625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300005332\|Ga0066388_106952425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300005439\|Ga0070711_101016221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300005536\|Ga0070697_101705402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300005549\|Ga0070704_100218015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1550	Open in IMG/M
3300005713\|Ga0066905_101091147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300005719\|Ga0068861_101684556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300005764\|Ga0066903_102733086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	957	Open in IMG/M
3300005764\|Ga0066903_102733571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300005764\|Ga0066903_104756198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300005764\|Ga0066903_107206833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300005764\|Ga0066903_107344257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300006028\|Ga0070717_10865691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300006038\|Ga0075365_10576960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300006038\|Ga0075365_11276377	Not Available	516	Open in IMG/M
3300006846\|Ga0075430_101606216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300007255\|Ga0099791_10278974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300009012\|Ga0066710_101967501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300009101\|Ga0105247_11810182	Not Available	508	Open in IMG/M
3300009147\|Ga0114129_12977306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300010043\|Ga0126380_10599528	Not Available	867	Open in IMG/M
3300010046\|Ga0126384_11170264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300010046\|Ga0126384_12359189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300010047\|Ga0126382_11284942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300010047\|Ga0126382_12535661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010359\|Ga0126376_10475577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300010360\|Ga0126372_11268495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300010360\|Ga0126372_12380851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300010361\|Ga0126378_12581693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300010361\|Ga0126378_13366934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300010366\|Ga0126379_11914912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300010366\|Ga0126379_12021257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300010376\|Ga0126381_100557095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1625	Open in IMG/M
3300010376\|Ga0126381_103801157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300010398\|Ga0126383_12453805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300010398\|Ga0126383_12682983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300010398\|Ga0126383_13511886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300010398\|Ga0126383_13582206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010868\|Ga0124844_1125056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300011271\|Ga0137393_11506583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300012021\|Ga0120192_10061710	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012354\|Ga0137366_10021922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4977	Open in IMG/M
3300012898\|Ga0157293_10288868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	537	Open in IMG/M
3300012948\|Ga0126375_11676608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300012960\|Ga0164301_10583995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300012971\|Ga0126369_12366040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300012971\|Ga0126369_13197856	Not Available	536	Open in IMG/M
3300012985\|Ga0164308_11453523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	628	Open in IMG/M
3300012988\|Ga0164306_11885421	Not Available	520	Open in IMG/M
3300013297\|Ga0157378_12770636	Not Available	543	Open in IMG/M
3300013308\|Ga0157375_12644415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300014968\|Ga0157379_11559883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	644	Open in IMG/M
3300015372\|Ga0132256_103588910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300015374\|Ga0132255_104104888	Not Available	618	Open in IMG/M
3300016270\|Ga0182036_10045636	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300016294\|Ga0182041_11095413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300016294\|Ga0182041_12274519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300016341\|Ga0182035_10757107	Not Available	850	Open in IMG/M
3300016357\|Ga0182032_10006522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5996	Open in IMG/M
3300016357\|Ga0182032_10633165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300016445\|Ga0182038_10018410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4144	Open in IMG/M
3300016445\|Ga0182038_10186801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1619	Open in IMG/M
3300018028\|Ga0184608_10207483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	859	Open in IMG/M
3300018028\|Ga0184608_10293696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	714	Open in IMG/M
3300018469\|Ga0190270_11471926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	729	Open in IMG/M
3300018481\|Ga0190271_10496651	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300019885\|Ga0193747_1154444	Not Available	519	Open in IMG/M
3300020581\|Ga0210399_11324956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300021082\|Ga0210380_10208409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	884	Open in IMG/M
3300021178\|Ga0210408_11104075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300021510\|Ga0222621_1133230	Not Available	529	Open in IMG/M
3300021560\|Ga0126371_10431167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300021560\|Ga0126371_12256409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300022694\|Ga0222623_10050848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1594	Open in IMG/M
3300022756\|Ga0222622_10154915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1481	Open in IMG/M
3300025907\|Ga0207645_10468637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	851	Open in IMG/M
3300025915\|Ga0207693_11389423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300025916\|Ga0207663_11105471	Not Available	637	Open in IMG/M
3300025923\|Ga0207681_10198256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300025928\|Ga0207700_11007624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300025938\|Ga0207704_11732152	Not Available	537	Open in IMG/M
3300026118\|Ga0207675_101780368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300027646\|Ga0209466_1089788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300027748\|Ga0209689_1414099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300027874\|Ga0209465_10150011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300027909\|Ga0209382_10015969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9174	Open in IMG/M
3300028047\|Ga0209526_10262186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300028709\|Ga0307279_10067492	Not Available	615	Open in IMG/M
3300028717\|Ga0307298_10238955	Not Available	538	Open in IMG/M
3300028722\|Ga0307319_10039926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1464	Open in IMG/M
3300028778\|Ga0307288_10268475	Not Available	672	Open in IMG/M
3300028784\|Ga0307282_10498187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300028885\|Ga0307304_10094819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1183	Open in IMG/M
3300031231\|Ga0170824_109031587	Not Available	511	Open in IMG/M
3300031455\|Ga0307505_10085118	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300031474\|Ga0170818_103583048	Not Available	613	Open in IMG/M
3300031545\|Ga0318541_10002078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7726	Open in IMG/M
3300031573\|Ga0310915_10113036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1848	Open in IMG/M
3300031681\|Ga0318572_10100918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1628	Open in IMG/M
3300031724\|Ga0318500_10071318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300031740\|Ga0307468_100420860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300031744\|Ga0306918_11371961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300031765\|Ga0318554_10670940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300031777\|Ga0318543_10225940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300031778\|Ga0318498_10541854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300031781\|Ga0318547_10006268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5125	Open in IMG/M
3300031793\|Ga0318548_10633334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300031796\|Ga0318576_10056189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1717	Open in IMG/M
3300031797\|Ga0318550_10480716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031799\|Ga0318565_10090401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1462	Open in IMG/M
3300031821\|Ga0318567_10039834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2384	Open in IMG/M
3300031832\|Ga0318499_10310795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031846\|Ga0318512_10031037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2290	Open in IMG/M
3300031846\|Ga0318512_10169924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300031854\|Ga0310904_10918696	Not Available	619	Open in IMG/M
3300031859\|Ga0318527_10473630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031893\|Ga0318536_10099371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300031896\|Ga0318551_10005539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5088	Open in IMG/M
3300031897\|Ga0318520_10333523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-17	918	Open in IMG/M
3300031910\|Ga0306923_11924632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031941\|Ga0310912_10803552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300031959\|Ga0318530_10096678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300032001\|Ga0306922_10214908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2064	Open in IMG/M
3300032008\|Ga0318562_10861115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300032043\|Ga0318556_10747438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300032044\|Ga0318558_10440246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300032054\|Ga0318570_10256336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300032055\|Ga0318575_10548872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300032063\|Ga0318504_10235827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300032064\|Ga0318510_10106506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300032180\|Ga0307471_101330057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300032828\|Ga0335080_11606935	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300033289\|Ga0310914_11831979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300033551\|Ga0247830_10603638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C131B0	869	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.92%
Host-Associated	Host-Associated	11.41%
Engineered	Engineered	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.89%
Plants	Host-Associated → Plants	11.41%
Aquatic	Environmental → Aquatic	4.03%
Modeled	Engineered → Modeled	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.38%
Sediment	Environmental → Aquatic → Sediment	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Roots	Host-Associated → Plants → Roots	1.34%
Freshwater	Environmental → Aquatic → Freshwater	0.67%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.46%
Loam	Environmental → Terrestrial → Soil → Loam	14.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.01%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.01%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.34%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.34%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0391.00005420	2166559005	Simulated	MKDELVTVLEAVRCAQAELAAYLDSADRNAELTIAKLVGILERREVV
INPhiseqgaiiFebDRAFT_1008641231	3300000364	Soil	MNEEFATVLEAIRRAQAELAAYLSSRDHDAELTIAKLVGILDRREVV
AF_2010_repII_A100DRAFT_10618751	3300000655	Forest Soil	MKDELTTILDAMHAAQAELADYLVSADRDAELTIAKLVGIL
AF_2010_repII_A001DRAFT_100738771	3300000793	Forest Soil	MKDELTTILDAMRAAQTELAVYLNSADCNAELTIAKLVGILDRRDVVTAMRLL
AF_2010_repII_A10DRAFT_10323092	3300000816	Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILERR
JGI11643J12802_120720863	3300000890	Soil	VTAMKDELGTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGIL
JGI10216J12902_1123786752	3300000956	Soil	MKDEELATILEAMRAAQAELAAYLNSADPDAELTLAKLVGILER
Ga0062594_1006814552	3300005093	Soil	MKEELATVLEAVCRAQAELTAYLHSADRNAELAIAKLVGILNRHEVVVAA
Ga0066808_10180902	3300005159	Soil	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVVVAAE
Ga0066869_101115191	3300005165	Soil	MKEELVTVLEAVCRAQAELAVYLHSTDRNAELAIAKLVGILNRHEVVVAA
Ga0066676_107113981	3300005186	Soil	MKDELTTILEAIGAAQAELAAYLTSGDRNAELAIAKLIGILDRRDVVK
Ga0070676_107107701	3300005328	Miscanthus Rhizosphere	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKLVGILNRHEVVVA
Ga0066388_1005159754	3300005332	Tropical Forest Soil	MNVMNEEFATVLEAIRRAQAELAAYLSSRDHDAELTIAKLVGILDRREV
Ga0066388_1039377482	3300005332	Tropical Forest Soil	MKDELPTILEALRAAQAELAAYLNSADRDAELTIAKLVGILERREVVRAMRLLAPH
Ga0066388_1062798751	3300005332	Tropical Forest Soil	MKDELTTILDAIRGAQGELADYLVSGDRNAELTIAKLVGILDRREV
Ga0066388_1063686251	3300005332	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILERREVVR
Ga0066388_1069524252	3300005332	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVV
Ga0070711_1010162212	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKDELTTILDAMRAAQAEPADYLVSEDRTAELTIAKLVGILERREVARAMRLLS
Ga0070697_1017054022	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKDELTTILEAMRGAQAELADYLVSADRNAELTIAKLVGILDRREVVKAMRLLRPLD
Ga0070704_1002180151	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVVVAAELLQL
Ga0066905_1010911472	3300005713	Tropical Forest Soil	MNEEFATVLEAIRRAQAELAAYLSSRDHDAELTIAKLVGILDRREVVGATRL
Ga0068861_1016845561	3300005719	Switchgrass Rhizosphere	MRDELVTVLEALRRAQAELGFYLDSADRNAELTIAKLVGI
Ga0066903_1027330862	3300005764	Tropical Forest Soil	MKDLLIILDAVKRAQAELSAYLQPGDRNAELTIAKLTGI
Ga0066903_1027335711	3300005764	Tropical Forest Soil	MKEELTLILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVVRAMRLLRV
Ga0066903_1047561981	3300005764	Tropical Forest Soil	MKEELTTILEAMRAAHGELADYLVSGDRNAELTIAKLVGILE
Ga0066903_1072068332	3300005764	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRRDVVRAMRLL
Ga0066903_1073442572	3300005764	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILERREVVRAMR
Ga0070717_108656912	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKNELTTILDAMRAAQAELAAYLNSADPNAELTLAKLV
Ga0075365_105769601	3300006038	Populus Endosphere	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRH
Ga0075365_112763771	3300006038	Populus Endosphere	MKDELVAVLEAVRRAQAELAAYLDSADRDAELTIAKLVGILERREVAGAVRLLQPWA
Ga0075430_1016062161	3300006846	Populus Rhizosphere	MNEEFATVLEAIRRAQAELAAYLSSRDHDAEVTIAKLVGILDRREVVGATR
Ga0099791_102789742	3300007255	Vadose Zone Soil	MKDELPTILEAIRAAQGELAAYLNSADRNAELTIAKLIGILERREVVRA
Ga0066710_1019675011	3300009012	Grasslands Soil	MNDELPTILQAIRAAQAELAAYLNSADRNAELTIAKLVGILERREVVRAMRLLHPRDRAA
Ga0105247_118101821	3300009101	Switchgrass Rhizosphere	MKEELVTVVEAVRRAQAELAAYLHSTDRNAELAIAK
Ga0114129_129773062	3300009147	Populus Rhizosphere	MKDELATILEAMGGAQAELADCLASADHNSELTIARLVGILDRREVIRAM
Ga0126380_105995283	3300010043	Tropical Forest Soil	MKEELTTILDAMRTAQAELADYLVSADRNAELTIAKLVGIL
Ga0126384_111702643	3300010046	Tropical Forest Soil	MKDQLTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRR
Ga0126384_123591891	3300010046	Tropical Forest Soil	MKDELATVLDAMRAAQAELAAYLNSADPDAELTLAKLVGIL
Ga0126382_112849421	3300010047	Tropical Forest Soil	MKDQLTTILDAMRGAQAELADYLVSADRNAELTIAKLVGILDRREVVRAMRLLRALE
Ga0126382_125356611	3300010047	Tropical Forest Soil	MKDQLTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVVRAMRL
Ga0126376_104755773	3300010359	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILERREVVRAMR*
Ga0126372_112684951	3300010360	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRRDVVRAMRLLRA
Ga0126372_123808511	3300010360	Tropical Forest Soil	MKDELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILDRRDVVRAMRL
Ga0126378_125816931	3300010361	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILE
Ga0126378_133669341	3300010361	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGILER
Ga0126379_119149121	3300010366	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVGIL
Ga0126379_120212571	3300010366	Tropical Forest Soil	MKEELTTILEAMRAAQAELADYLVSADRNAELTIAKLVDILERRE
Ga0126381_1005570951	3300010376	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELTIAK
Ga0126381_1038011572	3300010376	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLASADRNAELTIAKLVGILDRRDVVRAMRLLRALE
Ga0126383_124538052	3300010398	Tropical Forest Soil	MKRELTTILDAMRAAQAELADYLVSADRNAELTIAKLVG
Ga0126383_126829831	3300010398	Tropical Forest Soil	MKDELTTILDAMRAAQTELAVYLNSADCNAELTIAKLVGILDRRDVVT
Ga0126383_135118862	3300010398	Tropical Forest Soil	MKDDLTTIRDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVVRAMRLLRASE
Ga0126383_135822061	3300010398	Tropical Forest Soil	MKDQLTTILDAMRAAQAELADYLVSADRDAELTIAKLVGI
Ga0124844_11250563	3300010868	Tropical Forest Soil	MKEELTTILEAMRAAHGELADYLVSGDRNAELTIAKLVGILERREVV
Ga0137393_115065831	3300011271	Vadose Zone Soil	MKDELPTILEAIRAAQGELAAYLNSADRNAELTIAKLVGILERREVVRAMRLLRPRELAT
Ga0120192_100617102	3300012021	Terrestrial	MKVSNEEFATVLEAMRRARAELANYLSSRDHDAELTIARLVGILERREVVG
Ga0137366_100219227	3300012354	Vadose Zone Soil	MKDELTTILEAIGAAQAELADYLTSSDRNAELTIAKLIGILDRRDVVK
Ga0157293_102888682	3300012898	Soil	MQDELVTVLEALRRAQAELGFYLDSADRNAELTIAKLVGILDRRDVVG
Ga0126375_116766081	3300012948	Tropical Forest Soil	MKRELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVVRAMQLLR
Ga0164301_105839951	3300012960	Soil	MKDELATILDAMRAAQAELAAYLNSADPNAELTLAKLVGILDRREVVR
Ga0126369_123660401	3300012971	Tropical Forest Soil	MKDELTTILDAMHAAQAELADYLVSADRDAELTIAKLVGILDRREVVRAMRLL
Ga0126369_131978561	3300012971	Tropical Forest Soil	MKEELTTVLEAMRAAHAELADYLVRNAELTIAKLVGILERREVVRAMRSLH
Ga0164308_114535232	3300012985	Soil	MKEELVTVLEAVCRAQAELAVYLHSTDRNAELAIAKLVGIL
Ga0164306_118854212	3300012988	Soil	MKEELVTVLEAVRRAQAELAAYLHSADRNAELALAKLV
Ga0157378_127706361	3300013297	Miscanthus Rhizosphere	MKEELATVLEAVCRAQAELTAYLHSADRNAELASAKLVGILNRHEVVVAAQ
Ga0157375_126444151	3300013308	Miscanthus Rhizosphere	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKL
Ga0157379_115598832	3300014968	Switchgrass Rhizosphere	MKEELVTVVEAVRRAQAELAAYLHSTDRNAELAIAKLVGILNRHEVVVAAELLQPG
Ga0132256_1035889102	3300015372	Arabidopsis Rhizosphere	MNDELAIILDAMRAAQAELAAYLHSADPDAELTLAKLVGILE
Ga0132255_1041048882	3300015374	Arabidopsis Rhizosphere	MKDELVTVLEAVRRAQAELAAYLDSADRDAELTIAKLVGILERREVAGAVRLLQPWAARI
Ga0182036_100456363	3300016270	Soil	MKDELTTILDAMRAAQAELADYLASADRNAELTIAKLVGILDRRDVVRAMR
Ga0182041_110954133	3300016294	Soil	MKEELTTILEAMCAAHAELADYLVAGDRNAELTIAKLVGILERREVVR
Ga0182041_122745191	3300016294	Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRRDVVRAMRLLRAL
Ga0182035_107571073	3300016341	Soil	MKEELTTILEAMCAAHAELADYLVAGDRNAELTIAK
Ga0182032_100065228	3300016357	Soil	MKDELTTILEAVRGAQAELADYLVSADRNAELTVAKLVGILERREVVRAMRSLRVLEG
Ga0182032_106331651	3300016357	Soil	MKEELTTILEAMCAAHAELADYLVAGDRNAELTIAKLVGILERREVV
Ga0182038_100184101	3300016445	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKL
Ga0182038_101868014	3300016445	Soil	MKEELTTILEAMRAAQAELTDYLVSPDRNAELTIARLVGILERREVVRAMRVL
Ga0184608_102074831	3300018028	Groundwater Sediment	MKDELVTVLEAVRCAQAELAAYLDSADRNAELTIAKLVGILERREVVGAARLLQPWA
Ga0184608_102936962	3300018028	Groundwater Sediment	MKDEFVTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGILERREVVGAARLLQPWA
Ga0190270_114719261	3300018469	Soil	MKEELVTVVEAVCRAQAELAAYLHSHDRNAELAIAKLVGILNRHEVVVAAELLQPG
Ga0190271_104966513	3300018481	Soil	MKEELVTVVEAVCRAQAELAAYLHSHDRNAELAIAKLVGILNRHEVVVAAELLQPGAA
Ga0193747_11544441	3300019885	Soil	MKDELATILDALRAAQAELAAYLNSADPNAELTLAKLVGILDRREVVRATRLLRPARR
Ga0210399_113249561	3300020581	Soil	MTILEAMRAAQAELADYLVCADRNAELTIAKLVGILERREV
Ga0210380_102084092	3300021082	Groundwater Sediment	MKDELVTVLEAVRRAQAELAAYLDSADRNAELTMAKLVGILERREV
Ga0210408_111040751	3300021178	Soil	MTILEAMRAAQAELADYLVCADRNAELTIAKLVGILERREVA
Ga0222621_11332301	3300021510	Groundwater Sediment	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKLVGILNRHEVVVAAELLQ
Ga0126371_104311671	3300021560	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLASADRNAELTIAKLVGILDRREVVRAMR
Ga0126371_122564091	3300021560	Tropical Forest Soil	MKEELTTILEAMRAAHAELADYLVPGDRNAELTIAKLVGILE
Ga0222623_100508481	3300022694	Groundwater Sediment	MKDELVTVLEAVRCAQAELAAYLDSADRNAELTIAKLVGILERREVVG
Ga0222622_101549153	3300022756	Groundwater Sediment	MKDEFVTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGILERREVVGAVRLL
Ga0207645_104686372	3300025907	Miscanthus Rhizosphere	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKLVGILNRH
Ga0207693_113894231	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKDELATILDAMRAAQAELAAYLNSADPNAELTLAKLVGILDRREVV
Ga0207663_111054711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVVVAAELYGALGGRPLPPGA
Ga0207681_101982561	3300025923	Switchgrass Rhizosphere	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHE
Ga0207700_110076242	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRREVVKA
Ga0207704_117321521	3300025938	Miscanthus Rhizosphere	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVVVAAELLQLG
Ga0207675_1017803682	3300026118	Switchgrass Rhizosphere	MRDELVTVLEALRRAQAELGFYLDSADRNAELTIAKLVGILDR
Ga0209466_10897881	3300027646	Tropical Forest Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRRDVVR
Ga0209689_14140992	3300027748	Soil	MKDELTTILEAIGAAQAELAAYLTSSDRNAELTIAKLIGILDRRDVVKAARLLRLSHGAT
Ga0209465_101500113	3300027874	Tropical Forest Soil	MKEELTTILEAMRAAHGELADYLVSGDRNAELTIAKLVGILERREVVRAMRS
Ga0209382_100159691	3300027909	Populus Rhizosphere	MNVMNEEFATVLEAIRRAQAELAAYLSSRDHDAELTIAKLVGI
Ga0209526_102621861	3300028047	Forest Soil	MKDELTTILDAMRAAQAEPADYLVSEDRTAELTIAKLVGILERRE
Ga0307279_100674922	3300028709	Soil	MKEELVTVLEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVV
Ga0307298_102389551	3300028717	Soil	MKDELVTVLEAVRCAQAELAAYLDSADRNAELTIAKLV
Ga0307319_100399263	3300028722	Soil	MKDEFVTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGILER
Ga0307288_102684751	3300028778	Soil	MKDEFVTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGILERREVVGAVRLLQPWAARIPSS
Ga0307282_104981871	3300028784	Soil	MKDELVTVLEAVRCAQAELAAYLDSADRNAELTIAKLVGILERREVVGAAR
Ga0307304_100948193	3300028885	Soil	MKDEFVTVLEAVRRAQAELAAYLDSADRNAELTIAKLVGILERREVV
Ga0170824_1090315871	3300031231	Forest Soil	MKEELVTVVEAVCRAQAELAAYLHSNDRNAELAIAKLVGILNRHEVVVAAEL
Ga0307505_100851183	3300031455	Soil	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKLVGILNRHEVVVAAE
Ga0170818_1035830481	3300031474	Forest Soil	MKDELLTVLEAGRRAQAELAAYLDSADRDAELTIAKLVGILERREVVGA
Ga0318541_100020781	3300031545	Soil	MKDELTTILDGMRAAQAELADYLVSADRNAELTIAKLVGI
Ga0310915_101130361	3300031573	Soil	MKDELTTILEAMRAAQAEVADYLVSADRNAELTMAL
Ga0318572_101009184	3300031681	Soil	MKDEFATILDAMRGAQAELADYLASADHNSELTIARLVGILDRREVT
Ga0318500_100713181	3300031724	Soil	MKDELTTILEAMRAAHAELADYLVSGDRNAELTIAKLVG
Ga0307468_1004208601	3300031740	Hardwood Forest Soil	MKEELVTVLEAVCRAQAELAVYLHSTDRNAELAIAKLV
Ga0306918_113719611	3300031744	Soil	MKEELTTILDAMRAAQAELADYLVSADRNAELTIAK
Ga0318554_106709402	3300031765	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREV
Ga0318543_102259401	3300031777	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVIKA
Ga0318498_105418541	3300031778	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVIKAMRLLR
Ga0318547_100062681	3300031781	Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIA
Ga0318548_106333341	3300031793	Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELAIAKLVGILERREVVRAMRSLRAL
Ga0318576_100561891	3300031796	Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILDRRDVVRAMRLLRALE
Ga0318550_104807162	3300031797	Soil	MKEELTTVLEAMRAAQAELADYLVSADRNAELTIARLVGILERREVVRAM
Ga0318565_100904014	3300031799	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVVRA
Ga0318567_100398345	3300031821	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVIR
Ga0318499_103107951	3300031832	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAK
Ga0318512_100310374	3300031846	Soil	MKDELTTILDAMRAAQAELADYLVSADRNAELTIAKLVG
Ga0318512_101699241	3300031846	Soil	MKDELTTILEAVRGAQAELADYLVSADRNAELTIAKLVGILERREVVRAM
Ga0310904_109186961	3300031854	Soil	MKEELVTVLEAVRRAQAELAAYLHSNDRNAELALAKLVGILNRHEVVVAAELLQSG
Ga0318527_104736301	3300031859	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVIKAMRLL
Ga0318536_100993711	3300031893	Soil	MKDELTTILDAMRAAQTELAVYLNSADCNAELTIAKLVGILDRRDVV
Ga0318551_100055396	3300031896	Soil	MKEELTTILEAMRAAQGELADYLVSADRNAELTIAKLVGILERREVIRAMRLLRACKGVG
Ga0318520_103335232	3300031897	Soil	MKDLLIILDAVKRAQAELSAYLQPGDRNAELTIAKLTGIL
Ga0306923_119246322	3300031910	Soil	MNEQLTTILDAMRAAQAELADYLVSADRNAELTIAKLVGILD
Ga0310912_108035521	3300031941	Soil	MKEELTTILEAMCAAHAELADYLVAGDRNAELTIAKLVGILERREVVRAMRSLRAFE
Ga0318530_100966783	3300031959	Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELAIAKLVGILERREVVRAMRSLRALE
Ga0306922_102149081	3300032001	Soil	MKDELTTILEAMRAAQAEVADYLVSADRNAELTIAKLVGI
Ga0318562_108611152	3300032008	Soil	MKDELTTILDAMRAAQAELADYLASADRNAELTIAKLVGILDRRDVVR
Ga0318556_107474381	3300032043	Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELAIAKLVGILERREVVRAMRSL
Ga0318558_104402461	3300032044	Soil	MKDELTTILDAMRAAQTELAVYLNSADCNAELTIAKLVGILDRRD
Ga0318570_102563362	3300032054	Soil	MKDELTTILEAVRGAQAELADYLVSADRNAELTIAKLVG
Ga0318575_105488722	3300032055	Soil	MKEELTTVLEAMRAAQAELADYLVSADRNAELTIARLVGILERRE
Ga0318504_102358271	3300032063	Soil	MKDELTTILDAMRAAQTELAVYLNSADCNAELTIAKLVG
Ga0318510_101065063	3300032064	Soil	MKEELTTILEAMRAAHAELADYLVSGDRNAELAIAKLVGILERREVVRAMRSLRA
Ga0307471_1013300572	3300032180	Hardwood Forest Soil	MKDELPTILEAIRAAQAELAAYLNSADRNAELTIA
Ga0335080_116069352	3300032828	Soil	MKATTAEFATVLEAMRRAQAELAVYLGSRDCDAELTIAKLVGILDQREVV
Ga0310914_118319791	3300033289	Soil	MKEELTTVLEAMRAAQAELADYLVSADRNAELTIARLVGILERREVVRAMRLLRPFDG
Ga0247830_106036381	3300033551	Soil	MRDELVTVLEALRRAQAELGFYLDSADRNAELTIAKLVGILDRRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047546

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences