Metagenome Family F047543

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047543
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	76 residues
Representative Sequence	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Number of Associated Samples	116
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.52 %
% of genes near scaffold ends (potentially truncated)	33.56 %
% of genes from short scaffolds (< 2000 bps)	85.91 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.221 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.792 % of family members)
Environment Ontology (ENVO)	Unclassified (35.570 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.35% β-sheet: 19.63% Coil/Unstructured: 71.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00296	Bac_luciferase	29.53
PF00596	Aldolase_II	17.45
PF14707	Sulfatase_C	2.01
PF02771	Acyl-CoA_dh_N	1.34
PF00497	SBP_bac_3	1.34
PF03886	ABC_trans_aux	1.34
PF00528	BPD_transp_1	1.34
PF00459	Inositol_P	1.34
PF13437	HlyD_3	0.67
PF00884	Sulfatase	0.67
PF08450	SGL	0.67
PF05685	Uma2	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	29.53
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.34
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.67
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.67
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	24.16 %
Unclassified	root	N/A	16.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.41 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	24.16 %
Unclassified	root	N/A	16.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.36 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.34 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.34 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	24.16 %
Unclassified	root	N/A	16.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.34 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.34 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	23.49 %
Unclassified	root	N/A	16.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.34 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.34 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	23.49 %
Unclassified	root	N/A	16.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.34 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.34 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02I2I71	Not Available	531	Open in IMG/M
2065487018\|GPINP_F5MS3JC02IR7T6	Not Available	539	Open in IMG/M
2170459005\|F1BAP7Q01B8E48	Not Available	530	Open in IMG/M
3300000443\|F12B_10934373	Not Available	500	Open in IMG/M
3300000956\|JGI10216J12902_103057060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	748	Open in IMG/M
3300003994\|Ga0055435_10037446	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300004009\|Ga0055437_10100615	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300004268\|Ga0066398_10043601	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300004281\|Ga0066397_10001057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2250	Open in IMG/M
3300004479\|Ga0062595_100711481	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300004633\|Ga0066395_10061889	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300004633\|Ga0066395_10838838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300005186\|Ga0066676_10153049	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005213\|Ga0068998_10114668	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005332\|Ga0066388_100100680	All Organisms → cellular organisms → Bacteria	3352	Open in IMG/M
3300005332\|Ga0066388_107782747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300005340\|Ga0070689_102188989	Not Available	507	Open in IMG/M
3300005434\|Ga0070709_10642120	Not Available	821	Open in IMG/M
3300005440\|Ga0070705_101646152	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005445\|Ga0070708_100036934	All Organisms → cellular organisms → Bacteria	4260	Open in IMG/M
3300005445\|Ga0070708_101467057	Not Available	636	Open in IMG/M
3300005459\|Ga0068867_100993042	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005467\|Ga0070706_100141324	All Organisms → cellular organisms → Bacteria → Proteobacteria	2247	Open in IMG/M
3300005467\|Ga0070706_100300137	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300005468\|Ga0070707_100808069	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005518\|Ga0070699_100282081	Not Available	1488	Open in IMG/M
3300005536\|Ga0070697_101234964	Not Available	666	Open in IMG/M
3300005549\|Ga0070704_100828562	Not Available	828	Open in IMG/M
3300005713\|Ga0066905_100031180	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300005713\|Ga0066905_101762083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300005718\|Ga0068866_10527175	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005719\|Ga0068861_101525896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300005764\|Ga0066903_103341603	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005764\|Ga0066903_107653755	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005764\|Ga0066903_108203600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300005841\|Ga0068863_101240900	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006852\|Ga0075433_10245540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1589	Open in IMG/M
3300006871\|Ga0075434_100739392	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300007255\|Ga0099791_10546681	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009038\|Ga0099829_10863442	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300009038\|Ga0099829_11031248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300009090\|Ga0099827_10663369	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300009092\|Ga0105250_10275874	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300009143\|Ga0099792_10669662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300009176\|Ga0105242_10216510	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300010043\|Ga0126380_10024116	All Organisms → cellular organisms → Bacteria	2976	Open in IMG/M
3300010043\|Ga0126380_10165646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1437	Open in IMG/M
3300010043\|Ga0126380_11225530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300010046\|Ga0126384_10040447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3155	Open in IMG/M
3300010046\|Ga0126384_10295745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1329	Open in IMG/M
3300010046\|Ga0126384_10305296	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300010046\|Ga0126384_11143868	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010046\|Ga0126384_11755124	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010047\|Ga0126382_11526539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300010047\|Ga0126382_12053189	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010304\|Ga0134088_10096870	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300010358\|Ga0126370_10234005	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300010358\|Ga0126370_10503713	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300010358\|Ga0126370_11162597	Not Available	715	Open in IMG/M
3300010359\|Ga0126376_12656409	Not Available	550	Open in IMG/M
3300010359\|Ga0126376_12868969	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010360\|Ga0126372_10640572	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1027	Open in IMG/M
3300010360\|Ga0126372_11531144	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300010360\|Ga0126372_12418811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300010366\|Ga0126379_11494364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300010376\|Ga0126381_100808954	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300010376\|Ga0126381_103643207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300010398\|Ga0126383_11506911	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010398\|Ga0126383_12753365	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300010398\|Ga0126383_13378751	Not Available	521	Open in IMG/M
3300010868\|Ga0124844_1042786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1543	Open in IMG/M
3300011271\|Ga0137393_11171589	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300011271\|Ga0137393_11362130	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012096\|Ga0137389_10728766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300012201\|Ga0137365_10082153	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300012202\|Ga0137363_10001205	All Organisms → cellular organisms → Bacteria	14753	Open in IMG/M
3300012202\|Ga0137363_10554232	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300012203\|Ga0137399_10234628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300012204\|Ga0137374_10024145	All Organisms → cellular organisms → Bacteria → Proteobacteria	6805	Open in IMG/M
3300012209\|Ga0137379_10085420	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300012209\|Ga0137379_10267001	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300012211\|Ga0137377_11133429	Not Available	712	Open in IMG/M
3300012353\|Ga0137367_10513587	Not Available	843	Open in IMG/M
3300012357\|Ga0137384_10134080	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300012362\|Ga0137361_11569180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300012499\|Ga0157350_1004265	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300012685\|Ga0137397_10946508	Not Available	637	Open in IMG/M
3300012917\|Ga0137395_10133882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300012923\|Ga0137359_11615041	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012931\|Ga0153915_10275943	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300012931\|Ga0153915_11709421	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012948\|Ga0126375_11963059	Not Available	516	Open in IMG/M
3300012948\|Ga0126375_12014935	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012964\|Ga0153916_13366485	Not Available	502	Open in IMG/M
3300012971\|Ga0126369_13368197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300014154\|Ga0134075_10256663	Not Available	757	Open in IMG/M
3300014308\|Ga0075354_1057352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300015245\|Ga0137409_10221017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1696	Open in IMG/M
3300015372\|Ga0132256_100419018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1443	Open in IMG/M
3300015373\|Ga0132257_100186190	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300015374\|Ga0132255_100725186	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300016319\|Ga0182033_10385735	Not Available	1180	Open in IMG/M
3300017654\|Ga0134069_1286315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300018075\|Ga0184632_10480505	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300018077\|Ga0184633_10178725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1099	Open in IMG/M
3300018082\|Ga0184639_10551496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300020004\|Ga0193755_1171231	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021560\|Ga0126371_11677255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300025569\|Ga0210073_1057864	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300025899\|Ga0207642_10702460	Not Available	637	Open in IMG/M
3300025910\|Ga0207684_10098903	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300025922\|Ga0207646_11471545	Not Available	591	Open in IMG/M
3300025939\|Ga0207665_10643071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	831	Open in IMG/M
3300026285\|Ga0209438_1034507	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300026358\|Ga0257166_1050550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300026498\|Ga0257156_1029185	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300027527\|Ga0209684_1008696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1642	Open in IMG/M
3300027654\|Ga0209799_1002038	All Organisms → cellular organisms → Bacteria	3990	Open in IMG/M
3300028047\|Ga0209526_10039103	All Organisms → cellular organisms → Bacteria	3336	Open in IMG/M
3300028381\|Ga0268264_10151633	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300028792\|Ga0307504_10041196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1277	Open in IMG/M
3300031184\|Ga0307499_10275538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1049988	Not Available	1002	Open in IMG/M
3300031469\|Ga0170819_13312225	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300031564\|Ga0318573_10127418	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031640\|Ga0318555_10601478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300031679\|Ga0318561_10063415	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300031720\|Ga0307469_10429083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300031720\|Ga0307469_11317585	Not Available	686	Open in IMG/M
3300031723\|Ga0318493_10761101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300031740\|Ga0307468_100081775	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300031740\|Ga0307468_100125723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1590	Open in IMG/M
3300031740\|Ga0307468_102541102	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031765\|Ga0318554_10073735	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300031768\|Ga0318509_10426703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300031771\|Ga0318546_10041029	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300031947\|Ga0310909_11575967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300032009\|Ga0318563_10657094	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300032043\|Ga0318556_10046161	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300032059\|Ga0318533_10282792	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300032090\|Ga0318518_10057761	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300032174\|Ga0307470_11928362	Not Available	503	Open in IMG/M
3300032180\|Ga0307471_100078748	All Organisms → cellular organisms → Bacteria → Proteobacteria	2887	Open in IMG/M
3300032180\|Ga0307471_100719158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300032829\|Ga0335070_10100639	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300033433\|Ga0326726_10234283	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300033500\|Ga0326730_1064357	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300033806\|Ga0314865_040959	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300034090\|Ga0326723_0087128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.28%
Host-Associated	Host-Associated	8.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.56%
Plants	Host-Associated → Plants	8.72%
Aquatic	Environmental → Aquatic	6.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.36%
Marine	Environmental → Aquatic → Marine	2.68%
Freshwater	Environmental → Aquatic → Freshwater	2.01%
Sediment	Environmental → Aquatic → Sediment	2.01%
Peat	Environmental → Terrestrial → Peat	2.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.73%
Loam	Environmental → Terrestrial → Soil → Loam	20.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.03%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.34%
Sand	Environmental → Terrestrial → Soil → Sand	0.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.37%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.01%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.34%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.67%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02412550	2065487018	Soil	MTRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGPALSVPSARR
GPINP_02632700	2065487018	Soil	MKRLLLPALLGLALAVPGTAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFYPAGPALSVPSARR
E41_02562970	2170459005	Grass Soil	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
F12B_109343731	3300000443	Soil	MRRRLLLPALLGLPLTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
JGI10216J12902_1030570602	3300000956	Soil	MKRLLLPALLGLALPVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPIFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0055435_100374462	3300003994	Natural And Restored Wetlands	MSPLLLFVVLGFTLTLPAGAQQFPEPALYELLPANYQHPIARVCYTGEGICSIPTFIAPGTPCECRRANGAWVKGVCTH*
Ga0055437_101006152	3300004009	Natural And Restored Wetlands	MTRLFLFALLAAGLALPAGAQQFPEPVLYQMLPADYQYPVARVCYTDQGICSIPIFVRPGTPCECRRPDGVWVKGVCTH*
Ga0066398_100436011	3300004268	Tropical Forest Soil	MRRFLLAALLGVALALPATAQQFPEPELYEMLPADYPYPILRICYTSEGICSIPFTIFPGRPCECRRSDG
Ga0066397_100010574	3300004281	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0062595_1007114812	3300004479	Soil	MKRLLLPGLLGLALTVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0066395_100618891	3300004633	Tropical Forest Soil	MRHLLLFALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRR
Ga0066395_108388381	3300004633	Tropical Forest Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRR
Ga0066676_101530492	3300005186	Soil	MKRLLLPALFGLALAVPATAQQFPEPVLYELLPVSYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0068998_101146682	3300005213	Natural And Restored Wetlands	LAVTLALPATAQQTAEPTIYELLPAGQDYPIMRVCSTSEGICALPLFIPPGRQCECRRPDGSWVSGVCTH*
Ga0066388_1001006804	3300005332	Tropical Forest Soil	MRRFLLAALLGVALALPATAQQFPEPELYEMLPADYPYPILRICYTSEGICSIPFTIFPGRPCECRRSDGEWVKGICTR*
Ga0066388_1077827472	3300005332	Tropical Forest Soil	MRFLLLLALLGLAATVPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0070689_1021889891	3300005340	Switchgrass Rhizosphere	MRRVLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0070709_106421201	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0070705_1016461521	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPG
Ga0070708_1000369344	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVLLALLGTALALPATAQQFPEPVLYEMLPANYPYPIARVCYTAEGICSIPIFIVPGTPCECRRPDGEWVRGVCTH*
Ga0070708_1014670571	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPVLFGLALTVPATAQQFPEPTLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0068867_1009930422	3300005459	Miscanthus Rhizosphere	MRRVLLPALLGLALTVPAAAQQFPEPVLYELLPVKYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGV
Ga0070706_1001413243	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRCLVLFALLGTALALPATAQQFPEPVLYEMLPANYPYPIARVCYTAEGICSIPIFIVPGTPCECRRPDGEWVRGVCTH*
Ga0070706_1003001372	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPVLFGLALTVPATAQQFPEPVLYELLPVSYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0070707_1008080692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPVLFGLALTVPATAQQFPEPVLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0070699_1002820811	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPVLFGLALTVPATAQQFPEPTLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0070697_1012349641	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALTVPATAQQFPEPTLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0070704_1008285621	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0066905_1000311802	3300005713	Tropical Forest Soil	MRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGLCTH*
Ga0066905_1017620832	3300005713	Tropical Forest Soil	MRYPLLFPLLGLAVTLPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCEC
Ga0068866_105271752	3300005718	Miscanthus Rhizosphere	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLSVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0068861_1015258962	3300005719	Switchgrass Rhizosphere	MRRLLLPALLGLALTVPATAQQFPEPVLYELLAVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0066903_1033416032	3300005764	Tropical Forest Soil	MRYPLLFALLGLAVTVPAAAQQFPEPVLYELLPVNYPHPLARVCYTSQGICALPTFIPPGRPCECRRPDG
Ga0066903_1076537551	3300005764	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGQWVKGVCTH*
Ga0066903_1082036001	3300005764	Tropical Forest Soil	MRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0068863_1012409002	3300005841	Switchgrass Rhizosphere	MRRVLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDRVWVKGV
Ga0075433_102455403	3300006852	Populus Rhizosphere	MRHLLLFALLGLAVTVPAAAQQFPEPVLYELLPVDYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0075434_1007393922	3300006871	Populus Rhizosphere	MKRLLLPALLGLALAVPATAQQFPEPVLYELLPMSYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0099791_105466812	3300007255	Vadose Zone Soil	MRRLLLPALFGLALAVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCDCRRPDGEWVKGVCTH*
Ga0099829_108634421	3300009038	Vadose Zone Soil	MRHLLLFAALGLTLTLPAGAQQIPEPVLYQLLPADYQYPIARICYTSEGICSIPIFVAPGTLCECRRPDG
Ga0099829_110312482	3300009038	Vadose Zone Soil	MRRLLLPALFGLALAVPATAQQFPEPVLYELLPVDYPYPLARVCYTSQGICALPTFIFPGRPCDCRRPDGEWVKGVCTH*
Ga0099827_106633692	3300009090	Vadose Zone Soil	MRRLLLPALFGLALAVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIFPGRPCDCRRPDGEWVKGVCTH*
Ga0105250_102758741	3300009092	Switchgrass Rhizosphere	ALLGLALTVPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0099792_106696621	3300009143	Vadose Zone Soil	MRRFLLFALLGATLALPATAQQIPEPELYELLPADYPYPILRICYTTEGICSIPFYIAPGTPCECRGSDGEWVK
Ga0105242_102165102	3300009176	Miscanthus Rhizosphere	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126380_100241165	3300010043	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0126380_101656462	3300010043	Tropical Forest Soil	MPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126380_112255302	3300010043	Tropical Forest Soil	MRYPLLFPLLGLAVTLPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGTWVKGVCTH*
Ga0126384_100404472	3300010046	Tropical Forest Soil	MRYPLLFALLGLAVTVPAAAQQFPEPVLYELLPVNYPHPLARVCYTSQGICALPTFIPPGRPCECRRPDGSWVKGVCTH*
Ga0126384_102957451	3300010046	Tropical Forest Soil	LPASPVVETSKEVGTMRLLPLLALLGLAATMPATAQQFPEPMLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126384_103052962	3300010046	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0126384_111438681	3300010046	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGIWVKGVCTH*
Ga0126384_117551242	3300010046	Tropical Forest Soil	MLKEVGTMRHLLLLALLGLAITVPAAAQQFPEPVLYQLLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0126382_115265392	3300010047	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGE
Ga0126382_120531891	3300010047	Tropical Forest Soil	MRYPLLFALLGLAVTVPAAAQQFPEPVLYELLPANYPHPLARVCYTSQGICALPTFIPPGRPCECRRPDGSWVKGVCTH*
Ga0134088_100968702	3300010304	Grasslands Soil	MKRLLLPALFGLALTVPATAQQFPEPVLYELLPVGYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0126370_102340053	3300010358	Tropical Forest Soil	GTMRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126370_105037132	3300010358	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGICTH*
Ga0126370_111625971	3300010358	Tropical Forest Soil	TMRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126376_126564092	3300010359	Tropical Forest Soil	TVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0126376_128689692	3300010359	Tropical Forest Soil	MRGFLLCAMLGAAFAVPTTAQQFPEPELYELLPADYPYPILRICYTSEGICSIPFYIAPGTPCECRRSDGEWVRGVCTR*
Ga0126372_106405721	3300010360	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRP
Ga0126372_115311441	3300010360	Tropical Forest Soil	MRFLLLLALRGLAATVPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126372_124188112	3300010360	Tropical Forest Soil	MRFLLLFGLLGLAVTVPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126379_114943641	3300010366	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLAVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGAWVKGVCTH*
Ga0126381_1008089542	3300010376	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLERVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126381_1036432072	3300010376	Tropical Forest Soil	MRLLLLLALLGLAATMPAAAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126383_115069112	3300010398	Tropical Forest Soil	MRLLPLLALLGPAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCE
Ga0126383_127533652	3300010398	Tropical Forest Soil	MLKEVGTMRHLLLLALLGLAITVPAAAQQFPEPVLYQLLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGE
Ga0126383_133787511	3300010398	Tropical Forest Soil	MLKEVGTMRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0124844_10427863	3300010868	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICAL
Ga0137393_111715892	3300011271	Vadose Zone Soil	MRRLLLPALFGLALAVPATAQQFPEPVLYELLPVDYPYPLARVCYTSQGICALPTFIF
Ga0137393_113621302	3300011271	Vadose Zone Soil	MRRFLLFALLGATLALPATAQQIPEPELYELLPADYPYPILRICYTSEGICSIPFYIAPGTPCECRGSDGEWVKG
Ga0137389_107287661	3300012096	Vadose Zone Soil	MTRLWALLLVTVALTVPAAGQEFPEPVLYELLPADGSYPIARVCYTSAGICALPLYHPPGQPCACRRADGSWVSGVCTH*
Ga0137365_100821533	3300012201	Vadose Zone Soil	MRRLLLPALFGLALVVPATAQQFPEPMLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCDCRRPDGEWVKGVCTH*
Ga0137363_100012051	3300012202	Vadose Zone Soil	MNRLLLPALLGLALTVPATAQQFPEPVLYELLPINYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0137363_105542322	3300012202	Vadose Zone Soil	MVLMNRLWALALILLALIVPAEAQEFPEPTLYELVPADGSYPIARVCYTQEGICALPLYIPPGRPCECRRPDGTWVSGVCTH*
Ga0137399_102346282	3300012203	Vadose Zone Soil	MNRLWALALILLALIVPAEAQEFPEPTLYELVPADGSYPIARVCYTQEGICALPLYIPPGRPCECRRPDGTWVSGVCTH*
Ga0137374_100241457	3300012204	Vadose Zone Soil	MRRLLLPLLFGLALAVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIFPGRPCACRRPDGNWVKGVCTH*
Ga0137379_100854202	3300012209	Vadose Zone Soil	MRRLLLPALFGLALVVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCDCRRPDGEWVKGVCTH*
Ga0137379_102670012	3300012209	Vadose Zone Soil	MRRFLLCALLGAAFALPATAQQIPEPELYELLPDDYPYPILRICYTSEGICSIPFYIAPGTPCECRRSDGEWVKGVCTR*
Ga0137377_111334293	3300012211	Vadose Zone Soil	LALILLALIVPAEAQEFPEPTLYELVPADGSYPIARVCYTQEGICALPLYIPPGRPCECRRPDGTWVSGVCTH*
Ga0137367_105135871	3300012353	Vadose Zone Soil	ALVVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCDCRRPDGEWVKGVCTH*
Ga0137384_101340801	3300012357	Vadose Zone Soil	MRRLLLPALFGLALVVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPC
Ga0137361_115691802	3300012362	Vadose Zone Soil	MRRFLLCALLGAALALPATAQQIPEPELYELLRADYPYPILRICYTSEGICSIPFYIAPGTPCECRGSDGEWVKGVCTR*
Ga0157350_10042652	3300012499	Unplanted Soil	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0137397_109465082	3300012685	Vadose Zone Soil	MRRLLLLALLGAVMVLPAGAQQFPEPVLYELLPADYPYPVARVCYTAEGICAIPTYIFPGAPCECRRPDGEWVKGVCTH*
Ga0137395_101338822	3300012917	Vadose Zone Soil	MVLMNRLWALALILLALIVPAEAQEFPEPTLYELVPADGSYPIARVCYTQEGICALPFYIPPGRPCECRRPDGTWVSGVCTH*
Ga0137359_116150411	3300012923	Vadose Zone Soil	MRRLLLPALFGLALAVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCDC
Ga0153915_102759432	3300012931	Freshwater Wetlands	MRHLLLFVVLGLTLTLPAGAQEIPEPVLYELLPADYRYPIARICYTDEGICSIPIYVAPGTPCKCRRPDGTWVKGVCTH*
Ga0153915_117094211	3300012931	Freshwater Wetlands	MRHLLLFAVLGLTLTLPAGAQQIPEPVLYELLPADYQYPIARICYTDEGICSIPIYVAPGTPCECRRPDGTWAKGVCTH*
Ga0126375_119630591	3300012948	Tropical Forest Soil	ATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH*
Ga0126375_120149352	3300012948	Tropical Forest Soil	MEVGTMRHLLLFALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCE*
Ga0153916_133664852	3300012964	Freshwater Wetlands	MRHLLLFAVLGLTLTLPAGAQQIPGPVLYELLPADYQYPSARICYTDEGICSIPIYVAPGTPCECRRPDGTWVKGVCTH*
Ga0126369_133681972	3300012971	Tropical Forest Soil	MLKEVGTMRHLLLFALLGLTATVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH*
Ga0134075_102566632	3300014154	Grasslands Soil	MKRLLLPALFGLALTVPATAQQFPEPVLYELLPVSYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH*
Ga0075354_10573522	3300014308	Natural And Restored Wetlands	MSPLLLFVVLGFTLTLPAGAQQFPEPALYELLPANYQHPIARICYTGEGICSIPTFIAPGTPCECRRANGTWVKGVCTH*
Ga0137409_102210172	3300015245	Vadose Zone Soil	MTRLWALLLVVVVLTVPAAGQEFPEPVLYELLPADGSYPIARVCYTSEGICALPLYVPPGQPCACRRADGSWVSGVCTH*
Ga0132256_1004190182	3300015372	Arabidopsis Rhizosphere	MRRLLLPALLGLTLTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH*
Ga0132257_1001861901	3300015373	Arabidopsis Rhizosphere	MRRLLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCT
Ga0132255_1007251863	3300015374	Arabidopsis Rhizosphere	MRRVLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGGWVKGVCTH*
Ga0182033_103857352	3300016319	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYSLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH
Ga0134069_12863152	3300017654	Grasslands Soil	MRRFLLCALLGAAFALPATAQQIPEPELYELLPDDYPYPILRICYTSEGICSIPFYIAPGTPCECRRSDGEWVKGVCTR
Ga0184632_104805051	3300018075	Groundwater Sediment	VTLALPATAQQTPEPTLYELLPAGHPYPIARVCSTSEGICALPLFIPPGRQCECRRPDGSWVSGICTH
Ga0184633_101787251	3300018077	Groundwater Sediment	TLPAGAQQFPEPVLYEMLPADYQYPVARICYTNEGICSIPIYIAPGTPCECRRPDGVWVKGVCTH
Ga0184639_105514962	3300018082	Groundwater Sediment	MRHLLLFAVLGLMLTLPAGAQQFPEPVLYEMLPADYRYPVARVCYTNEGICSIPIYIAPGTPCECRRPDGVWVKGVCTH
Ga0193755_11712311	3300020004	Soil	MKRLLLPALLGLALTVPATAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCQCRRPDGEWAKGVCTH
Ga0126371_116772551	3300021560	Tropical Forest Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYQLLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH
Ga0210073_10578641	3300025569	Natural And Restored Wetlands	MSPLLLFVVLGFTLTLPAGAQQFPEPALYELLPANYQHPIARVCYTGEGICSIPTFIAPGTPCECRRANGAWVKGVC
Ga0207642_107024602	3300025899	Miscanthus Rhizosphere	ALTVPAAAQQFPEPVLYELLSVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH
Ga0207684_100989033	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVLLALLGTALALPATAQQFPEPVLYEMLPANYPYPIARVCYTAEGICSIPIFIVPGTPCECRRPDGEWVRGVCTH
Ga0207646_114715451	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLLPVLFGLALTVPATAQQFPEPTLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWVKGVCTH
Ga0207665_106430712	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVLLPALLGLALTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0209438_10345071	3300026285	Grasslands Soil	VKRLLLPALLGLALTVPATAQQFPEPVLYELLPLNYPYPLARVCYTSQGICALPTFIPPGRPCGCRRPDGEWV
Ga0257166_10505502	3300026358	Soil	HMRRLLLLALLGAVMVLPAGAQQFPEPVLYELLPADYPYPVARVCYTAEGICAIPTYIFPGAPCECRRPDGEWVKGVCTH
Ga0257156_10291852	3300026498	Soil	MRRLLLPALLGLALTVPAAAQQFPEPVLYELLPVKYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH
Ga0209684_10086961	3300027527	Tropical Forest Soil	MRLLPLLALLGLAATMPATAQQFPEPVLYELLPADYPYPLARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGICTH
Ga0209799_10020381	3300027654	Tropical Forest Soil	MRHLLLFALLGLTVTVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH
Ga0209526_100391035	3300028047	Forest Soil	MRRLLLLALLGAVMVLPAGAQQFPEPVLYELLPADYPYPVARVCYTAEGICAIPTYIFPGAPCECRRPDGEWVKGVCTH
Ga0268264_101516333	3300028381	Switchgrass Rhizosphere	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLSVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH
Ga0307504_100411962	3300028792	Soil	MTRLWALLLVVAALTVPAAGQEFPEPVLYELLPADGSYPIARVCYTSEGICALPLYHPPGQPCACRRADGSWVSGVCTH
Ga0307499_102755382	3300031184	Soil	LTAPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH
(restricted) Ga0255312_10499883	3300031248	Sandy Soil	MTRLWALLLVVAALTVPAAGQEFPEPVLYELLPADGSYPIARVCSTSEGICALPLYIPPGRPCACRRADGSWVSGVCTH
Ga0170819_133122252	3300031469	Forest Soil	MKRLLLPALLGLALTAPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0318573_101274181	3300031564	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVC
Ga0318555_106014781	3300031640	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPP
Ga0318561_100634151	3300031679	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPG
Ga0307469_104290832	3300031720	Hardwood Forest Soil	MRRLLLCALLGAALALPATAQQFPEPVLYEMLPADYPYPILRICYTSEGICSIPFYVPPGRPCECRRSDGEWVKGVCTH
Ga0307469_113175852	3300031720	Hardwood Forest Soil	MKRLLLPALLGLALTVPATAQQFPEPVLYELLPVNYPYPLARICYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0318493_107611012	3300031723	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIP
Ga0307468_1000817752	3300031740	Hardwood Forest Soil	MKRLLLPALLGLALTVPAAAQQFPEPVLYELLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGVWVKGVCTH
Ga0307468_1001257232	3300031740	Hardwood Forest Soil	MRRLLLLALLGTALALPATAQQFPEPVLYEMLPADYPYPILRICYTSEGICSIPGYIPPGRPCECRRSDGEWVKGVCTH
Ga0307468_1025411021	3300031740	Hardwood Forest Soil	LALTVPATAQQFPEPVLYELLPVNYPYPLARICYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0318554_100737353	3300031765	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPC
Ga0318509_104267031	3300031768	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPT
Ga0318546_100410295	3300031771	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPVRPCECRRPDGEWVNGVCTH
Ga0310909_115759672	3300031947	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECR
Ga0318563_106570942	3300032009	Soil	MLKEVGTMRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVCTH
Ga0318556_100461611	3300032043	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFI
Ga0318533_102827922	3300032059	Soil	MRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWV
Ga0318518_100577613	3300032090	Soil	MLKEVGTMRHLLLLALLGLAITVPAAAQQFPEPVLYELLPVNYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVNGVGTH
Ga0307470_119283622	3300032174	Hardwood Forest Soil	MKRLLLPALLGLALTVPAAAQQFPEPVLYDLLPVHYPYPLARVCYTSQGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0307471_1000787482	3300032180	Hardwood Forest Soil	MKRLLLPVLFGLALTVPATAQQFPEPVLYELLPVNYPYPIARVCYTSQGICALPTFIPPGRPCQCRRPDGEWGKGVCTH
Ga0307471_1007191582	3300032180	Hardwood Forest Soil	MRRLLLLALLGTALALPATAQQFPEPVLYEMLPADYPYPILRICYTGEGICSIPFYVPPGRPCECRRSDGEWVKGVCTH
Ga0335070_101006393	3300032829	Soil	MGRMRRVLLLALLGAALVLPAGAQQFPDPVLYELLPVDYPYPVARVCYTSEGICALPTFIPPGSPCECRRPDGEWVKGVCTH
Ga0326726_102342831	3300033433	Peat Soil	MGRMRRVLLLALLGAALVLPAGAQQFPDPVLYELLPVDYPYPVARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH
Ga0326730_10643571	3300033500	Peat Soil	MGRMRRVLLLALLGAALVLPAGAQQFPDPVLYELLPVDYPYPVARVCYTSEGICALPTFIPPGRPCECRRPDGEW
Ga0314865_040959_631_873	3300033806	Peatland	MRRLLVLGLLAAASLAVPATAQQFPEPELYQLLPPDYPYPILRVCYTDEGICSIPGFIAPGRPCECRRPDGSWVKGVCTH
Ga0326723_0087128_616_855	3300034090	Peat Soil	MRRVLLLALLGAALVLPAGAQQFPDPVLYELLPVDYPYPVARVCYTSEGICALPTFIPPGRPCECRRPDGEWVKGVCTH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters