Metagenome / Metatranscriptome Family F047274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	81 residues
Representative Sequence	MSLKAILFTLGCLVAWFVLLPLLLIAGGTALFAYAIFAELGAFLTGNPRKTPDTSAAREIARSMCGGYGVQQRSTRRFPAP
Number of Associated Samples	116
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.33 %
% of genes near scaffold ends (potentially truncated)	22.00 %
% of genes from short scaffolds (< 2000 bps)	69.33 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.333 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.54% β-sheet: 0.00% Coil/Unstructured: 50.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF04138	GtrA	32.67
PF02518	HATPase_c	19.33
PF01544	CorA	14.67
PF13231	PMT_2	8.67
PF00486	Trans_reg_C	2.67
PF14310	Fn3-like	2.67
PF09587	PGA_cap	1.33
PF00535	Glycos_transf_2	0.67
PF00501	AMP-binding	0.67
PF00873	ACR_tran	0.67
PF02321	OEP	0.67
PF06472	ABC_membrane_2	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	14.67
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.33 %
Unclassified	root	N/A	40.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.33 %
Unclassified	root	N/A	40.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.33 %
Unclassified	root	N/A	40.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	9.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.00 %
Chthonomonadetes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	5.33 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	4.00 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.67 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.33 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.67 %
Chthonomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	4.67 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	4.00 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.67 %
Pigmentiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga	1.33 %
unclassified Chthonomonadales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales → unclassified Chthonomonadales	0.67 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	4.67 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4.00 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.67 %
Pigmentiphaga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1.33 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.67 %
Chthonomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales → unclassified Chthonomonadales → Chthonomonadales bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	4.67 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4.00 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.67 %
Pigmentiphaga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1.33 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.67 %
Chthonomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales → unclassified Chthonomonadales → Chthonomonadales bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.67 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	4.67 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4.00 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.67 %
Pigmentiphaga litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1.33 %
Mycobacterium xenopi 3993	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 3993	0.67 %
Chthonomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales → unclassified Chthonomonadales → Chthonomonadales bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402I3W8U	Not Available	520	Open in IMG/M
3300001593\|JGI12635J15846_10465241	Not Available	751	Open in IMG/M
3300002245\|JGIcombinedJ26739_100976312	Not Available	731	Open in IMG/M
3300002917\|JGI25616J43925_10014870	All Organisms → cellular organisms → Bacteria → Proteobacteria	3442	Open in IMG/M
3300002917\|JGI25616J43925_10205334	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300004080\|Ga0062385_10289063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	933	Open in IMG/M
3300004092\|Ga0062389_101281846	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005436\|Ga0070713_100282245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1524	Open in IMG/M
3300005546\|Ga0070696_100240562	Not Available	1365	Open in IMG/M
3300005563\|Ga0068855_100868016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	955	Open in IMG/M
3300005591\|Ga0070761_10388212	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005602\|Ga0070762_10729960	Not Available	666	Open in IMG/M
3300005712\|Ga0070764_10102793	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300005712\|Ga0070764_10511343	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300005944\|Ga0066788_10042874	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300005995\|Ga0066790_10264792	Not Available	733	Open in IMG/M
3300006173\|Ga0070716_100387532	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300006893\|Ga0073928_10008498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	12874	Open in IMG/M
3300006953\|Ga0074063_13523839	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300007255\|Ga0099791_10167335	Not Available	1031	Open in IMG/M
3300007258\|Ga0099793_10025904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2450	Open in IMG/M
3300007265\|Ga0099794_10128505	Not Available	1279	Open in IMG/M
3300007265\|Ga0099794_10656866	Not Available	557	Open in IMG/M
3300009038\|Ga0099829_10493757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1016	Open in IMG/M
3300009038\|Ga0099829_11612044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Chthonomonadetes → Chthonomonadales → unclassified Chthonomonadales → Chthonomonadales bacterium	535	Open in IMG/M
3300009088\|Ga0099830_11228903	Not Available	622	Open in IMG/M
3300009500\|Ga0116229_10074885	All Organisms → cellular organisms → Bacteria → Proteobacteria	3160	Open in IMG/M
3300009633\|Ga0116129_1005921	All Organisms → cellular organisms → Bacteria → Proteobacteria	5307	Open in IMG/M
3300009633\|Ga0116129_1011669	All Organisms → cellular organisms → Bacteria	3374	Open in IMG/M
3300009633\|Ga0116129_1018118	All Organisms → cellular organisms → Bacteria → Proteobacteria	2516	Open in IMG/M
3300009633\|Ga0116129_1243164	Not Available	510	Open in IMG/M
3300010371\|Ga0134125_10157584	All Organisms → cellular organisms → Bacteria → Proteobacteria	2529	Open in IMG/M
3300010371\|Ga0134125_10828961	Not Available	1017	Open in IMG/M
3300010373\|Ga0134128_10054980	All Organisms → cellular organisms → Bacteria → Proteobacteria	4592	Open in IMG/M
3300010396\|Ga0134126_10025584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7488	Open in IMG/M
3300011269\|Ga0137392_10475372	Not Available	1038	Open in IMG/M
3300011269\|Ga0137392_10595228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	918	Open in IMG/M
3300011270\|Ga0137391_10135805	Not Available	2140	Open in IMG/M
3300011270\|Ga0137391_10567956	Not Available	954	Open in IMG/M
3300011271\|Ga0137393_10091649	Not Available	2465	Open in IMG/M
3300012096\|Ga0137389_11052589	Not Available	697	Open in IMG/M
3300012202\|Ga0137363_10039581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3315	Open in IMG/M
3300012203\|Ga0137399_10119408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	2069	Open in IMG/M
3300012205\|Ga0137362_10025452	All Organisms → cellular organisms → Bacteria → Proteobacteria	4625	Open in IMG/M
3300012205\|Ga0137362_10086899	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300012359\|Ga0137385_10345440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1274	Open in IMG/M
3300012361\|Ga0137360_10399401	Not Available	1158	Open in IMG/M
3300012363\|Ga0137390_10651828	Not Available	1018	Open in IMG/M
3300012363\|Ga0137390_11127947	Not Available	733	Open in IMG/M
3300012582\|Ga0137358_10010338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	5791	Open in IMG/M
3300012582\|Ga0137358_10020844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4222	Open in IMG/M
3300012683\|Ga0137398_10268584	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300012685\|Ga0137397_10422781	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300012924\|Ga0137413_10303009	Not Available	1117	Open in IMG/M
3300012927\|Ga0137416_10034077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3428	Open in IMG/M
3300012927\|Ga0137416_10071496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	2518	Open in IMG/M
3300012927\|Ga0137416_10205697	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300012929\|Ga0137404_10067580	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300012930\|Ga0137407_11450309	Not Available	653	Open in IMG/M
3300012944\|Ga0137410_10037313	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300012944\|Ga0137410_10075213	All Organisms → cellular organisms → Bacteria → Proteobacteria	2458	Open in IMG/M
3300014492\|Ga0182013_10010262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	9721	Open in IMG/M
3300014502\|Ga0182021_11157573	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300014838\|Ga0182030_10187562	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300014838\|Ga0182030_10324109	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300015206\|Ga0167644_1139238	Not Available	634	Open in IMG/M
3300015241\|Ga0137418_10013809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7455	Open in IMG/M
3300015264\|Ga0137403_11537553	Not Available	517	Open in IMG/M
3300016294\|Ga0182041_11109902	Not Available	719	Open in IMG/M
3300019787\|Ga0182031_1505049	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300020001\|Ga0193731_1165590	Not Available	533	Open in IMG/M
3300020021\|Ga0193726_1000397	All Organisms → cellular organisms → Bacteria → Proteobacteria	47852	Open in IMG/M
3300020021\|Ga0193726_1167203	Not Available	947	Open in IMG/M
3300020140\|Ga0179590_1025221	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300020199\|Ga0179592_10166959	Not Available	1004	Open in IMG/M
3300020579\|Ga0210407_10161466	All Organisms → cellular organisms → Bacteria → Proteobacteria	1731	Open in IMG/M
3300021168\|Ga0210406_10226571	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300021170\|Ga0210400_10010153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7617	Open in IMG/M
3300021170\|Ga0210400_11058183	Not Available	658	Open in IMG/M
3300021170\|Ga0210400_11613340	Not Available	512	Open in IMG/M
3300021178\|Ga0210408_10203447	All Organisms → cellular organisms → Bacteria → Proteobacteria	1575	Open in IMG/M
3300021401\|Ga0210393_10976278	Not Available	686	Open in IMG/M
3300021402\|Ga0210385_11092059	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300021404\|Ga0210389_10707202	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300021432\|Ga0210384_10299611	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300021474\|Ga0210390_10556649	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300021478\|Ga0210402_11736442	Not Available	550	Open in IMG/M
3300021479\|Ga0210410_10062022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3267	Open in IMG/M
3300022511\|Ga0242651_1052219	Not Available	508	Open in IMG/M
3300022533\|Ga0242662_10182045	Not Available	653	Open in IMG/M
3300022557\|Ga0212123_10031268	All Organisms → cellular organisms → Bacteria → Proteobacteria	5455	Open in IMG/M
3300024222\|Ga0247691_1024867	Not Available	929	Open in IMG/M
3300024288\|Ga0179589_10162756	Not Available	958	Open in IMG/M
3300024347\|Ga0179591_1127013	All Organisms → cellular organisms → Bacteria → Proteobacteria	2731	Open in IMG/M
3300025463\|Ga0208193_1000806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14919	Open in IMG/M
3300025463\|Ga0208193_1033143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1251	Open in IMG/M
3300025463\|Ga0208193_1047756	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300025913\|Ga0207695_10724733	Not Available	875	Open in IMG/M
3300025913\|Ga0207695_11009685	Not Available	712	Open in IMG/M
3300025949\|Ga0207667_10573263	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300026304\|Ga0209240_1094360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1082	Open in IMG/M
3300026320\|Ga0209131_1009721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	5984	Open in IMG/M
3300026475\|Ga0257147_1013093	Not Available	1116	Open in IMG/M
3300026482\|Ga0257172_1000936	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300026557\|Ga0179587_10032685	All Organisms → cellular organisms → Bacteria → Proteobacteria	2902	Open in IMG/M
3300027545\|Ga0209008_1022299	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300027559\|Ga0209222_1013076	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300027559\|Ga0209222_1023517	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300027652\|Ga0209007_1142275	Not Available	597	Open in IMG/M
3300027860\|Ga0209611_10056632	All Organisms → cellular organisms → Bacteria → Proteobacteria	3036	Open in IMG/M
3300027895\|Ga0209624_10101048	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300027908\|Ga0209006_10080845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi → Mycobacterium xenopi 3993	2892	Open in IMG/M
3300028017\|Ga0265356_1040912	Not Available	510	Open in IMG/M
3300028138\|Ga0247684_1025101	Not Available	944	Open in IMG/M
3300028536\|Ga0137415_10016907	All Organisms → cellular organisms → Bacteria → Proteobacteria	7231	Open in IMG/M
3300028536\|Ga0137415_10067223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3449	Open in IMG/M
3300028536\|Ga0137415_10158816	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300028536\|Ga0137415_10462935	Not Available	1074	Open in IMG/M
3300028773\|Ga0302234_10015773	All Organisms → cellular organisms → Bacteria	3699	Open in IMG/M
3300030399\|Ga0311353_10391155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → Pigmentiphaga litoralis	1253	Open in IMG/M
3300030520\|Ga0311372_11268265	Not Available	935	Open in IMG/M
3300030528\|Ga0210277_10575849	Not Available	565	Open in IMG/M
3300030624\|Ga0210251_10353443	Not Available	806	Open in IMG/M
3300030738\|Ga0265462_12587788	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300030761\|Ga0265722_102582	Not Available	696	Open in IMG/M
3300030855\|Ga0075374_11440282	Not Available	636	Open in IMG/M
3300030916\|Ga0075386_10997349	Not Available	546	Open in IMG/M
3300031015\|Ga0138298_1241996	Not Available	796	Open in IMG/M
3300031057\|Ga0170834_101686060	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031231\|Ga0170824_110830849	Not Available	577	Open in IMG/M
3300031231\|Ga0170824_115874927	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300031231\|Ga0170824_119561358	Not Available	700	Open in IMG/M
3300031234\|Ga0302325_10501052	Not Available	1836	Open in IMG/M
3300031236\|Ga0302324_101746231	Not Available	794	Open in IMG/M
3300031240\|Ga0265320_10534096	Not Available	518	Open in IMG/M
3300031446\|Ga0170820_17701389	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031469\|Ga0170819_10994680	Not Available	784	Open in IMG/M
3300031469\|Ga0170819_14081652	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031469\|Ga0170819_16713093	Not Available	606	Open in IMG/M
3300031474\|Ga0170818_108181589	Not Available	532	Open in IMG/M
3300031708\|Ga0310686_115706557	All Organisms → cellular organisms → Bacteria → Proteobacteria	4718	Open in IMG/M
3300031715\|Ga0307476_10045092	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300031715\|Ga0307476_10368220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300031823\|Ga0307478_10632174	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300031954\|Ga0306926_11136372	Not Available	921	Open in IMG/M
3300032174\|Ga0307470_10001207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	10399	Open in IMG/M
3300032174\|Ga0307470_10023074	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300032174\|Ga0307470_10431687	Not Available	941	Open in IMG/M
3300033887\|Ga0334790_047243	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300034163\|Ga0370515_0339005	Not Available	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.67%
Host-Associated	Host-Associated	5.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.33%
Aquatic	Environmental → Aquatic	7.33%
Plants	Host-Associated → Plants	5.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Freshwater	Environmental → Aquatic → Freshwater	6.00%
Peat	Environmental → Terrestrial → Peat	4.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.33%
Peat Moss	Host-Associated → Plants → Peat Moss	1.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.67%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.33%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.67%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030624	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_04399560	2189573004	Grass Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGFGR
JGI12635J15846_104652412	3300001593	Forest Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREIAREMCGGYGVEAAGARRRQTP*
JGIcombinedJ26739_1009763122	3300002245	Forest Soil	MSLKAVLFSLGCVIAWFVLLPALVIGGGVALFAYAIFAELGASLTGSPPGTLDTTVAREIARTMCGRGYGLEASGARRRYVP*
JGI25616J43925_100148702	3300002917	Grasslands Soil	MSLKAILFTLGCLVAWFVLLPLLLIAGGTALFAYAIFAELGAFLTGNPRKTPDTSAAREIARSMCGGYGVQQRSTRRFPAP*
JGI25616J43925_102053342	3300002917	Grasslands Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAELGAILMGIPSNTLDTSVARETARRMCGAYAVQARSTRRLPAP*
Ga0062385_102890631	3300004080	Bog Forest Soil	MSLKAILFLLGCVLAWFVLLPLLVIGGGITLFAYAIFAELGEFLMGNPSKTLDTTVAREIARRMCGGYGVRARTTRVQRLL*
Ga0062389_1012818461	3300004092	Bog Forest Soil	MSLKTILFSLGCVLAWFVLLPVLMIGGGIALFSYAVFVELGAFLTGSPGKTLDSSVAREIARRMCDGYGVSARNSTRRPSR*
Ga0070713_1002822452	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQFQDFRGRRVYSRAMSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGFGR*
Ga0070696_1002405622	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSVKAIFFALGCILAWFVLLPLLVIGGGIALFVYAIFAELGALLTGSPYQSLDPSAAREIARRMCAGYGVAADTRRRQSPR*
Ga0068855_1008680161	3300005563	Corn Rhizosphere	MSVKAIFFAFGCILAWFVLLPLLVIGGGIALFVYAIFAELGALLTGNPYQSLDTAAAREIARRMCAGYGVAADTRRRQSPR*
Ga0070761_103882121	3300005591	Soil	MSLKAIIFSLSCLVAWFVLLPLLVIGGGLALFAYAVFAELGALLLGSSGKTLDTSVAREIARGMCGDYRVPVRGARRLP*
Ga0070762_107299602	3300005602	Soil	MSLKAVFLSLGCLIAWFVLLPMVLIGGGFALFAYAVFAELGAFLAGIPSKTLDTSAAREMARRICHGYSVQPSSIRRYPLA*
Ga0070764_101027932	3300005712	Soil	MSTKAVLFSLGCLVAWFVLLPVLVIGGGLSLFAYAVFAELGAFLAGIPSKTIDTSAAREMARSICPGYGVSAGNVRRLPLA*
Ga0070764_105113432	3300005712	Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREMAREMCGGYGVEAAGARRRQTP*
Ga0066788_100428742	3300005944	Soil	MSTKAVFFSLGCLVAWFILLPLLVIGGGLALFAYAVIAELGAFLAGIPSKTLDTSAARQMARSICPGYGVPAGNVRRLPLA*
Ga0066790_102647922	3300005995	Soil	MSTKAVFFSLGCLVAWFILLPLLVIGGGLALFAYAVIAELGAFLAGIPSKTLDTSAARQMARSICPGYGVPSG
Ga0070716_1003875322	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGFGR*
Ga0073928_100084983	3300006893	Iron-Sulfur Acid Spring	MSSKAILFTIGCLVAWFILLPLLLIVGGAALFACAIFAELGEFLLGNPSKALDKSAASEIARRMCGGYGVQVRSTRRFPAR*
Ga0074063_135238392	3300006953	Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGRPSKALDTAVAREIARRMCGFGR*
Ga0099791_101673352	3300007255	Vadose Zone Soil	LSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSTTLDKSAASEIARRMCRGVQVRSTRRFPPP*
Ga0099793_100259042	3300007258	Vadose Zone Soil	ILRLPRLISKTSRRHKGAAMSLKAILFTIGCLVACFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0099794_101285052	3300007265	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0099794_106568662	3300007265	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLLIAGGVALFAYAIFAELGVFVMGIPSNTPDTSVAREIARRMCGGHGVHARNTRRHPAP*
Ga0099829_104937572	3300009038	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRSTRRFPPP*
Ga0099829_116120441	3300009038	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLLIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGA
Ga0099830_112289031	3300009088	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLFIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP*
Ga0116229_100748852	3300009500	Host-Associated	MMSLKAIFFSLGCIIVWFVLLPVLVVCGGIALFSYAVFAELGALLTGEHGKTLETSAAREIARRMCLDKRRFPRA*
Ga0116129_10059212	3300009633	Peatland	MSLKAVLFSLGCVIAWFVLLPALVIGGGIALFAYATFAELGASLTGSPAGTLDTRVAREIARTMCGGGYGLEASGTRRRYVP*
Ga0116129_10116692	3300009633	Peatland	MSLKAVLFSLGCVIAWFVILPALVIGGGIALFAYAIIAELGASLTGSPPGTLDTTVAREIARTMCGGGYGLEVSGARRHYT*
Ga0116129_10181182	3300009633	Peatland	MSLKAVLFSLGCVVAWFVLLPALAIGGGIALFAYAIFAELAASLTGSPARTLDTRVAREIARTMCGDGYGLKASGARRRYLP*
Ga0116129_12431642	3300009633	Peatland	LKAVLFSLGCVVAWFVLLPALVIGGGIALFSYAIFAELGASLTGSPAATLDTTVAREIARTMCGGGYGLEASGARRRYLP*
Ga0134125_101575841	3300010371	Terrestrial Soil	MSVKAIFFALGCILSWFVLLPALVIGGGIALFAYAIFAELGALLTGNPYQSLDTSAAREIARRMCAGYGVADSRRRQSPR*
Ga0134125_108289612	3300010371	Terrestrial Soil	MSVKAIFFALGCILAWFALLPLLVIGGGIALFVYAIFAELGALLTGSPYQSLDPSAAREIARRMCAGYGVAADTRRRQSPR*
Ga0134128_100549805	3300010373	Terrestrial Soil	VMSVKAIFFALGCILSWFVLLPALVIGGGIALFAYAIFAELGALLTGNPYQSLDTSAAREIARRMCAGYGVADSRRRQSPR*
Ga0134126_100255846	3300010396	Terrestrial Soil	MSMKAIFFALGCILSWFVLLPVLMIGGGIALFAYAIFAELGALITGHPYQPLDTSAAREIARRMCAGYGTQRRDRPQVNRRVTT*
Ga0137392_104753722	3300011269	Vadose Zone Soil	SLKTILFTLGYLVAWFVLLPVLLIAGGTALFAYAIFAELGAFLAGHPSDTLDPSAAREIARRMCGGYGVQARSTRRFPAP*
Ga0137392_105952282	3300011269	Vadose Zone Soil	MLMALSSASYEAGKRAAGKGDAMSLKTILFSLGCLLAWFVLLPMLFIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGGHGVHARNTRRHPAP*
Ga0137391_101358052	3300011270	Vadose Zone Soil	MLMALSSASYEAGKRAAGKGDAMSLKTILFSLGCLLAWFVLLPMLFIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGGYGVQARSTRRFPAP*
Ga0137391_105679562	3300011270	Vadose Zone Soil	MSLKTILFTLGYLVAWFVLLPVLLIAGGTALFAYAIFAELGAFLAGHPSDTLDPSAAREIARRMCGGYGVQARSTRRFPAP*
Ga0137393_100916493	3300011271	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLLIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP*
Ga0137389_110525892	3300012096	Vadose Zone Soil	VSLKAVLFALGCLVAWFALLPLLLIAGGATLFAYAIFAELAAFLTGHRSKTLDTSAAREIARRMCSGYGFQVRSTDGS
Ga0137363_100395813	3300012202	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKALDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0137399_101194083	3300012203	Vadose Zone Soil	LSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELREFLLGNPSKTLDKSAASEIARRMCCGIQVRSTRRFPPP*
Ga0137362_100254522	3300012205	Vadose Zone Soil	LKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0137362_100868993	3300012205	Vadose Zone Soil	SSASYEAGKRAAGKGDAMSLKTILFSLGCLLAWFVLLPMLFIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP*
Ga0137385_103454402	3300012359	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKALDKSAASEIARRMCRGVQVRSTRRFPPP*
Ga0137360_103994011	3300012361	Vadose Zone Soil	MLMALSSASYEAGKRAAGKGDAMSLKTILFSLGCLLAWFVLLPMLFIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP*
Ga0137390_106518282	3300012363	Vadose Zone Soil	MSLKAILFSLGCLLAWFVLLPLLVIGGGVALFVYAIFAELGAFLTGNPGKTVDTSVAREIARRMCGGHGVHARNTRRHPAP*
Ga0137390_111279472	3300012363	Vadose Zone Soil	MFKAILFSLGCLLAWFVLLPLLFIGGGAALFAYAIFAELGAFLTGNTGKTVDTTVAREIARRICGGYGVPRHP
Ga0137358_100103384	3300012582	Vadose Zone Soil	LSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0137358_100208442	3300012582	Vadose Zone Soil	MPLKAILFTLGCLVAWFVLLPVLLIVGGTALFAHAIFAELGALLTGNPGKTPDAAAAREIARRMCSGYGVHVRTTRRHPPR*
Ga0137398_102685842	3300012683	Vadose Zone Soil	MSLKAIFFALGCLVAWFVLMPLFLLAGGVMLCAYAVFAELGSILMGTPNNTLDTPVAREIARRMCGAYAVQARSTRRLPAP*
Ga0137397_104227812	3300012685	Vadose Zone Soil	MSLKAILFALGCLVAWFVLLPVLLISGGVALAAYATFAELGAFLMGMPSKTLDSSAAREIARRMCGAYAVQARSTRQLPAP*
Ga0137413_103030091	3300012924	Vadose Zone Soil	MSLKAIFFALGCLVAWFVLMPLFLLAGGVMLCAYAVFAELGSILMGTPNNTLDTPVAREIARRMCGAYAVQARSTRRLPTP*
Ga0137416_100340772	3300012927	Vadose Zone Soil	MSLKTILFTIGCLGAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP*
Ga0137416_100714963	3300012927	Vadose Zone Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCVYAVFAELGGILMGTPSNTLDTSVARETARRMCGAYAVQARSTRRLPAP*
Ga0137416_102056972	3300012927	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLLIACGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP*
Ga0137404_100675801	3300012929	Vadose Zone Soil	KGDAMSLKAILFALGCLVAWFVLLPVLLISGGVALAAYATFAELGAFLMGMPSKTLDTSAAREIARRMCGAYAVQARSTRQLPAP*
Ga0137407_114503091	3300012930	Vadose Zone Soil	MALSSALYEADGRAASKGDAMSLKAILFALGCLVAWFVLLPVLLISGGVALAAYATFAELGAFLMGMPSKTLDSSAAREIARRMCGAYAVQARGTRRLPAP*
Ga0137410_100373133	3300012944	Vadose Zone Soil	MSPKVVLFTLGCVLAWFVLLPAVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGGYGQ*
Ga0137410_100752132	3300012944	Vadose Zone Soil	MALSSALYEADGRAASKGDAMSLKAILFALGCLVAWFVLLPVLLISGGVALAAYATFAELGAFLMGMPSKTLDSSAAREIARRMCGAYAVQARSTRQLPAP*
Ga0182013_100102624	3300014492	Bog	MSLKAFVFSLGCVLAWFVLLPLLVVGGGIALLAYAIFAELGSVLTGNAYKNLDTSAAREIARRMCGAYGVPARTRLRRSLR*
Ga0182021_111575732	3300014502	Fen	MSLKALVFFLGCILAWFVLLPLLVVAGGVALFAYAIFAELAAFVTGNPGKSLDTSAAREIARRMCLGYGVRARATRRYSSLSR*
Ga0182030_101875623	3300014838	Bog	MKPFIFSVGCVLAWFVLLPMLVIGGGIALLAYAIFAELGAVLTGNAFKTLDTSAAREIARRMCGGYGLPVRSRMRRPLP*
Ga0182030_103241092	3300014838	Bog	MSYKAVFFSLGCLVAWFVLLPALVIGGGLALFAYAVFAELGAFLAGIPSKTLDTSAAREMARRICPGYGVRASNVRRLPLA*
Ga0167644_11392381	3300015206	Glacier Forefield Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCTYAVFAELGAILIGIPSNTLDTSVAREIARRMCGAYAVQARSTRHLPTP*
Ga0137418_100138096	3300015241	Vadose Zone Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAELGAILMGIPSNTVDTSVARETARRMCGAYAVQARSTRRLPAP*
Ga0137403_115375531	3300015264	Vadose Zone Soil	MLIGVSCVPYHQNEPAAGKGYAMSLKAILFSLGCLVAWFVLLPLLLIAGGAALFAYAIFAELGVLITGIPRKTPDASVAREIARRMCGGYGVQV
Ga0182041_111099021	3300016294	Soil	MSPKAILFSLGCLLAWFVLLPVAVIGGGTALLLYAILAELAVLITGQSSEAPDAAAAR
Ga0182031_15050491	3300019787	Bog	MSLKAFVFSLGCVLAWFVLLPLLVVGGGIALLAYAIFAELGSVLTGNAYKNLDTSAAREIARRMCGAYGVPARTRLRRSLR
Ga0193731_11655902	3300020001	Soil	MSLKAIMFSLGCILAWFVLLPVLLIVGGAALLAYAIFAELAAVLRGSPNTPLDTSVAREIARRMCGGYRTGTRRHSSP
Ga0193726_100039717	3300020021	Soil	MSLKAILFSVGCVIAWFVLLPAVVIGGGLSLLLYAVLAELGAFITGNPSKTLDTSVAREIARRLCGGYGMRVRNTRRFPSR
Ga0193726_11672031	3300020021	Soil	MSLKAILLSFGCLIAWFVLLPTFVVGGGFALFTYAVFGELGAFLTGKPSQTLETSVAREMAHRMCGGYPIQARSSRRLPSR
Ga0179590_10252212	3300020140	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP
Ga0179592_101669591	3300020199	Vadose Zone Soil	MSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKALDESAASEIARRMCCGVQVRGTRRFPPP
Ga0210407_101614662	3300020579	Soil	MKAILFTIGCLVAWFILLPTLLIVGGATLFASAIFAELAESLVGIPSKALDKSAASEIARRMCCGYGVQVRSTRRFPAP
Ga0210406_102265712	3300021168	Soil	MLMSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAELGAILIGIPSNTLDTSVAREIARRMCGAYAVQARSTRRLPTP
Ga0210400_100101534	3300021170	Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGVILCAYAVFAELGAILIGIPSNTIDTSVAREIARRMCGAYAVQARSTRRLPTP
Ga0210400_110581831	3300021170	Soil	VAWFILLPALLIVGGATLFASAIFAELAESLVGIPSKALDKSAASEIARRMCCGYGVQVRSTRRFPAP
Ga0210400_116133401	3300021170	Soil	VFFTLGCLVAWFVLLPLLLVAGGTALFAYAIFAELGSFLTGAPSKTLDASAAREIARRMCGGYGVRVRSTRRFPAP
Ga0210408_102034472	3300021178	Soil	MSLKAILFTIGCLVAWFILLPMLLIVGGATLFASAIFAELAESLVGIPSKALDKSAASEIARRMCCGYGVQVRSTRRFPAP
Ga0210393_109762782	3300021401	Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREIAREMCGGYGVETAGARRRQTP
Ga0210385_110920592	3300021402	Soil	MSTKAIFFSLGCLIAWFVLLPLLVIGGGLALFAYAVFAELGAFLAGIPSKTLDTSAAREMARSICPGYGVTASNVRRLPLA
Ga0210389_107072022	3300021404	Soil	MLEASVIANIMQGYWGGRMSLKAIFFSLGCVLAWFVLLPVVVIGGGLSLFLYAILAELGALATGDRSKAIDASAAREMASRMCGGYGVQSRRTRRLPL
Ga0210384_102996111	3300021432	Soil	MSLKAILFTIGCLVAWFILLPTLLIVGGATLFASAIFAELAESLVGIPSKALDKSAASEIARRMCCGYGVQVRSTRRFPAP
Ga0210390_105566492	3300021474	Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREMAREMCGGYGVEAAGARRRQTP
Ga0210402_117364422	3300021478	Soil	MSPKAILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELGAFITGKPSKALDTAVAREIARRLCGS
Ga0210410_100620224	3300021479	Soil	PTRGAAMSLKAILFTLGCLVAWFVLLPLLVIVGGTALFAYAIFAELGAFLIGNPRETLDTSAAREFARRTCGGYRVQMRSTRRFPAP
Ga0242651_10522191	3300022511	Soil	FAMSLKTFFFSLGCIIAWFVLLPMLVIGGGIALFAYATFAELGAFLTRTPARTLDTTVAREIAHKMCGGYGRKINGAGGPRSAAS
Ga0242662_101820451	3300022533	Soil	KRGAAMSLKAILFTIGCLVAWFILLPLLLIVGGAALFAYAIFAEFGELLVGNPKAHDKSAASEIAHRMCGGYGVQVRSTRRFPAP
Ga0212123_100312683	3300022557	Iron-Sulfur Acid Spring	MSSKAILFTIGCLVAWFILLPLLLIVGGAALFACAIFAELGEFLLGNPSKALDKSAASEIARRMCGGYGVQVRSTRRFPAR
Ga0247691_10248671	3300024222	Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAR
Ga0179589_101627562	3300024288	Vadose Zone Soil	LSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP
Ga0179591_11270132	3300024347	Vadose Zone Soil	LSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPRKTLDKSAASEIARRMCCGVQVRGTRRFPPP
Ga0208193_10008063	3300025463	Peatland	MSLKAVLFSLGCVIAWFVLLPALVIGGGIALFAYATFAELGASLTGSPAGTLDTRVAREIARTMCGGGYGLEASGTRRRYVP
Ga0208193_10331432	3300025463	Peatland	MSLKAVLFSLGCVVAWFVLLPALAIGGGIALFAYAIFAELAASLTGSPARTLDTRVAREIARTMCGDGYGLKASGARRRYLP
Ga0208193_10477562	3300025463	Peatland	MSLKAVLFSLGCVIAWFVILPALVIGGGIALFAYAIIAELGASLTGSPPGTLDTTVAREIARTMCGGGYGLEVSGARRHYT
Ga0207695_107247332	3300025913	Corn Rhizosphere	SQVRVIAMSMKAIFFAVGCILSWFVLLPVLMIGGGIALFAYAIFAELGALITGHPYQPLDTSAAREIARRMCAGYGAQRRDRPQVNRRVTT
Ga0207695_110096852	3300025913	Corn Rhizosphere	MSVKAIFFAFGCILAWFVLLPLLVIGGGIALFVYAIFAELGALLTGNPYQSLDTAAAREIARRMCAGYGVAADTRRRQSPR
Ga0207667_105732631	3300025949	Corn Rhizosphere	ILAWFVLLPLLVIGGGIALFVYAIFAELGALLTGNPYQSLDTAAAREIARRMCAGYGVAADTRRRQSPR
Ga0209240_10943602	3300026304	Grasslands Soil	MSLKAILFTLGCLVAWFVLLPLLLIAGGTALFAYAIFAELGAFLTGNPRKTPDTSAAREIARSMCGGYGVQQRSTRRFPAP
Ga0209131_10097213	3300026320	Grasslands Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAEFGAILMGIPSNTLDTSVARETARRMCGAYAVQARSTRRLPAP
Ga0257147_10130932	3300026475	Soil	ALGCLVAWFVLLPLFLIAGGAILCAYAIFAELGAILMGIPSNTLDTSVARETARRMCGAYAVQARGTRRLPAP
Ga0257172_10009362	3300026482	Soil	MSLKAVLFTFGCLVAWFVLLPLLLIAGGTALFAYAMFAEVGARLTGISGKTPDTSAAREIARRMCGGYGVQVRSARRFPAP
Ga0179587_100326853	3300026557	Vadose Zone Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAELGAILMGIPSNTVDTSVARETARRMCGAYAVQARSTRRLPAP
Ga0209008_10222993	3300027545	Forest Soil	MFLKAVLFPLSCIIAWFLLLPMLVVGGGIALFAYATFAELGALLTNSPARTLDTTVAREIARNMCGGGYGAKTSGARRHYT
Ga0209222_10130762	3300027559	Forest Soil	MSLKAVLFWLGCVVAWFVLLPALVIGGGIALFAYAIFAELAASLTGSPARTLDTTVAREIARRMCGDGYGLKASGARRRYLP
Ga0209222_10235172	3300027559	Forest Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREIAREMCGGYGVEAAGARRRQTP
Ga0209007_11422752	3300027652	Forest Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREIAREMCGGYGVEAA
Ga0209611_100566322	3300027860	Host-Associated	MMSLKAIFFSLGCIIVWFVLLPVLVVCGGIALFSYAVFAELGALLTGEHGKTLETSAAREIARRMCLDKRRFPRA
Ga0209624_101010482	3300027895	Forest Soil	MSLKAVLFSLGCVIAWFVLLPALVIGGGVALFAYAIFAELGASLTGSPPGTLDTTVAREIARTMCGRGYGLEASGARRRYVP
Ga0209006_100808453	3300027908	Forest Soil	MSLKALFLSFGCLVAWFVLLPAFVVGGGFALFTYAVLAELGAFLAGKPSQTLETSVAREMAHRMCGGYGVQVRSGRPLP
Ga0265356_10409121	3300028017	Rhizosphere	MSLKTILFSLGCVIAWFVLLPTLMIGGGIALFAYATFAELGAFLTGSPARTLDTTVARELARKMCDGYGVKARGTRRPSSP
Ga0247684_10251012	3300028138	Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCG
Ga0137415_100169073	3300028536	Vadose Zone Soil	MSLKAILFALGCLVAWFVLLPLFLIAGGAILCAYAVFAELGAILMGIPSNTLDTSVARETARRMCGAYAVQARSTRRLPAP
Ga0137415_100672234	3300028536	Vadose Zone Soil	MSLKTILFTIGCLGAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKTLDKSAASEIARRMCCGVQVRGTRRFPPP
Ga0137415_101588162	3300028536	Vadose Zone Soil	MLMALSSASYEAGERAAGKGDAMSLKTILFSLGCLLAWFVLLPMLLIAGGVALFAYAIFAELGVFLMGIPSNTPDTSVAREIARRMCGAYAVQARNPRRLPAP
Ga0137415_104629351	3300028536	Vadose Zone Soil	MFKAILFSLGCLLAWFVLLPLLFIGGGAALFAYAIFAELGAFLTGNTGKTVDTTVAREIARRIC
Ga0302234_100157733	3300028773	Palsa	MSLKAVLFSLGCVIAWFVLLPVLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAREIAREMCGGYGVEAAGARRRQTP
Ga0311353_103911551	3300030399	Palsa	LAWFVLLPLLVIGGGITLFAYAIFAELGAFLTGNRSQTLDSNVAREIARRMCGGYGIPARTTRIHRPR
Ga0311372_112682652	3300030520	Palsa	MSLKAILFSLGCVLAWFVLLPLLVIGGGITLFAYAIFAELGAFLTGNRSQTLDSNVAREIARRMCGGYGIPARTTRIHRPR
Ga0210277_105758491	3300030528	Soil	MSTKAIFFSLGCLIAWFVLLPLLVIGGGVALFAYAVFAELGAFLAGMPSKTLDTSAAREMARSICPGYGVPAGNVRRLPLA
Ga0210251_103534432	3300030624	Soil	GSVLHSLGSPAMSLKAILFSLSCLVAWFVLLPLLVIGGGLALFAYAVFAELGALLIGNSAKTLDTAVAREIARRMCGDYRVQARGARRLR
Ga0265462_125877881	3300030738	Soil	MSLKAILFSLGCVIAWFVLLPMLVIGGGIALFAYATFAELGALLTGTPARTLDTTAAREIAHNMCGGYLVKARGTRRNYSP
Ga0265722_1025821	3300030761	Soil	MSLKAVLFSLGCVIAWFVLLPMLVIGGGIALFSCATFAELGALLTGSRARTLDTRVAHEIAREMCGGYGVEAAGARRRQTP
Ga0075374_114402822	3300030855	Soil	RRHKGAAMSLKAILFAIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGNPSKALDKSAASEIARRMCCGVQVRGTRRFPPP
Ga0075386_109973492	3300030916	Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGFALFLYAIVAELAAFITGKPSKALDTAVAREIARRMCGG
Ga0138298_12419962	3300031015	Soil	MSLKAVLFSLGCVVAWFVLLPALVIGGGIALFAYAIFAELAASLAGSPPGTVDTTVAREIARTMCGGGYGLPATGARRRYLP
Ga0170834_1016860602	3300031057	Forest Soil	MSPKVILLTLGCVLAWFVLLPVVVIGGGFALFLYAILAELTAFITGKPSKALDTAVAREIARRMCGIGR
Ga0170824_1108308492	3300031231	Forest Soil	MSLKAILFSVGCVLAWFVLLPAVVIGGGLSLLLYAVLAEFGAFITGNPSKTLDTSVAREIARRLCGGYGVRVRNTRRFPSR
Ga0170824_1158749272	3300031231	Forest Soil	MSPKVILFTLGCVLAWFVLLPVVVIGGGLALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGFGR
Ga0170824_1195613581	3300031231	Forest Soil	IWFRELVLPARLSSAYYDATNAKGDAMSLKAILFALGCLVAWFVLLPLFLIAGAILCAYAVFAELGAILIGIPSNTLDTSVAREIARRMCGAYAVQARSTRRLPTP
Ga0302325_105010521	3300031234	Palsa	GCLIAWFVLLPVLVIGGGIALFAYAVLAETAALLTGTTYNTLDTSTAREIARRMCGGYGFRTREIRRPLP
Ga0302324_1017462312	3300031236	Palsa	MSFKAFLFSLGCLIAWFVLLPVLVIGGGIALFAYAVLAETAALLTGTTYNTLDTSTAREIARRMCGGYGFRTREIRRPLP
Ga0265320_105340961	3300031240	Rhizosphere	MPIKALLFSFGCVLAWFVLLPSLVIGGGLALFAYAIFAELGALLTGTPSKPLDTSVAREIARRMCGGRHPSP
Ga0170820_177013891	3300031446	Forest Soil	MSLKAILFSLGCLLAWFVLLPAMAIGGGLSLLLYAILAEFGAFITGRPSKTLDTSVAREIARRLCGGYGVRARSTRRLP
Ga0170819_109946801	3300031469	Forest Soil	SKVILITLGCVLAWFVLLPVVVIGGGFALFLYAILAELAAFITGKPSKALDTAVAREIARRMCGFGR
Ga0170819_140816521	3300031469	Forest Soil	MSLKVIVFSFGCVLAWFVLLPAVVIGGGLSLLLYATLAEFGAFISGNPSKTLDTAVARDIARRVCGGYGVRARSRRLPLR
Ga0170819_167130932	3300031469	Forest Soil	MSLKAILFSLGCVLAWFVLLPAVAIGGGLSLLLYAILAEFGAFITGRPSKTLDTSVAREIARRLCGGYGVRARSTRRLP
Ga0170818_1081815891	3300031474	Forest Soil	SRRHEGVAMSLKTILFTIGCLVAWFILLPMLLIVGGTALFAYAIFAELGEFLLGSPSKALDKSAASEIARRMCCGVQVRSTRRFPPP
Ga0310686_1157065574	3300031708	Soil	MSLKTILFSLGCVIAWFVLLPTLMIGGGIALFAYATFAELGAFLTGSPARTLDTTVAREIARKVCGGHGVKALGTRRPFSP
Ga0307476_100450921	3300031715	Hardwood Forest Soil	MSLKTILFSFGCVLAWFVLLPLFLIGGGIALFTYAVVAELGAILTGSRDKPLDSSVAREITRRMCGGYGVPARNSQRRPWR
Ga0307476_103682202	3300031715	Hardwood Forest Soil	MSLKAILFALGCLVAWFVLLPLLLIVGGTVLFTYAIFAEIGAFLVGNPGKSLDASVARDIARRTCGGYGVQMRSTRRFPAP
Ga0307478_106321742	3300031823	Hardwood Forest Soil	MSLKAVLFSLGCVIAWFVLLPALVIGGGIALFAYATFAELGASLTGSPAGTLDTRVAREIARTMCGGGYGLEASGARRRYVP
Ga0306926_111363721	3300031954	Soil	MSPKAILFSLGCLLAWFVLLPVAVIGGGTALLLYAILAELAVLITGQSSDAPDAAAARAIARRMCGEQF
Ga0307470_100012075	3300032174	Hardwood Forest Soil	MSLKAILLALGCLVAWFVLLPLFLIAGGAILCAYAMLAELGAILMGIPSNTLDKSVAREIARRMCGTYAVQARSTRRLPTP
Ga0307470_100230742	3300032174	Hardwood Forest Soil	MSLKAILYTIGCLVAWFILLPLFLIVGGAALLACAIFAELGEFLLGNPSKALDKSAASEIARRMCGGFGVQMRSTRRFPAP
Ga0307470_104316871	3300032174	Hardwood Forest Soil	FVLLPLFLIAGGVTLCAYAVFAELGAILMGIPSNTLDTSVARETARRMCGAYAIQARSTRRLPTP
Ga0334790_047243_418_657	3300033887	Soil	MKPFIFSVGCVLAWFVLLPMLVIGGGIALLAYAIFAELGAVLTGNAFKTLDTSAAREIARRMCGGYGLPVRSRMRRPLP
Ga0370515_0339005_94_339	3300034163	Untreated Peat Soil	MSLKTILFSLGCVLAWFVLLPVLLIGGGIALFAYAGFAELGAFLTGSPCKTLDSSVAREIARRMCGGYGVPARNGQRRPSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences