Metagenome / Metatranscriptome Family F047272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047272
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	61 residues
Representative Sequence	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPF
Number of Associated Samples	98
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.80 %
% of genes near scaffold ends (potentially truncated)	78.00 %
% of genes from short scaffolds (< 2000 bps)	75.33 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.667 % of family members)
Environment Ontology (ENVO)	Unclassified (67.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.44% β-sheet: 0.00% Coil/Unstructured: 45.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00072	Response_reg	16.00
PF03401	TctC	6.67
PF11064	DUF2865	6.00
PF14520	HHH_5	4.67
PF04392	ABC_sub_bind	4.00
PF13450	NAD_binding_8	4.00
PF06035	Peptidase_C93	4.00
PF13531	SBP_bac_11	2.67
PF03169	OPT	1.33
PF01520	Amidase_3	1.33
PF17201	Cache_3-Cache_2	1.33
PF12850	Metallophos_2	0.67
PF10282	Lactonase	0.67
PF00213	OSCP	0.67
PF00903	Glyoxalase	0.67
PF02738	MoCoBD_1	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.67
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.00
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	4.00
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	1.33
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	1.33
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.33 %
Unclassified	root	N/A	36.67 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.33 %
Unclassified	root	N/A	36.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.00 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.67 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.67 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.67 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.33 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.33 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.67 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.33 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.33 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.67 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.67 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.33 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.33 %
Roseomonas oryzicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	0.67 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.67 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10028925	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300000789\|JGI1027J11758_12985197	Not Available	686	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10111820	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300004633\|Ga0066395_10041374	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005165\|Ga0066869_10029402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	879	Open in IMG/M
3300005171\|Ga0066677_10734374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	550	Open in IMG/M
3300005332\|Ga0066388_101717842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1111	Open in IMG/M
3300005332\|Ga0066388_103334969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300005363\|Ga0008090_10062447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	520	Open in IMG/M
3300005363\|Ga0008090_10244843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	827	Open in IMG/M
3300005467\|Ga0070706_100404993	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005560\|Ga0066670_11039071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300005713\|Ga0066905_101402991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	632	Open in IMG/M
3300005764\|Ga0066903_103801222	Not Available	811	Open in IMG/M
3300005764\|Ga0066903_103951917	Not Available	795	Open in IMG/M
3300005764\|Ga0066903_106340426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300005764\|Ga0066903_106840789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	592	Open in IMG/M
3300006173\|Ga0070716_100403070	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300006800\|Ga0066660_10716301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300006871\|Ga0075434_101911558	Not Available	599	Open in IMG/M
3300006904\|Ga0075424_102110163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	594	Open in IMG/M
3300009143\|Ga0099792_10982426	Not Available	563	Open in IMG/M
3300009792\|Ga0126374_10746223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300010043\|Ga0126380_11594532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300010358\|Ga0126370_12358231	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010358\|Ga0126370_12405951	Not Available	523	Open in IMG/M
3300010359\|Ga0126376_10170650	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300010361\|Ga0126378_11184749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300010366\|Ga0126379_11085181	Not Available	906	Open in IMG/M
3300010366\|Ga0126379_12626859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	601	Open in IMG/M
3300010366\|Ga0126379_13388959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300010366\|Ga0126379_13563782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300010376\|Ga0126381_100697298	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300010863\|Ga0124850_1016898	All Organisms → cellular organisms → Bacteria → Proteobacteria	2327	Open in IMG/M
3300010863\|Ga0124850_1022687	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300012202\|Ga0137363_11055440	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	690	Open in IMG/M
3300012210\|Ga0137378_10688451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300012361\|Ga0137360_11704692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300012948\|Ga0126375_10785604	Not Available	752	Open in IMG/M
3300012948\|Ga0126375_12066907	Not Available	505	Open in IMG/M
3300012971\|Ga0126369_10944217	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300016294\|Ga0182041_11720125	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300016319\|Ga0182033_10601316	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300016319\|Ga0182033_11543593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	600	Open in IMG/M
3300016341\|Ga0182035_10824046	Not Available	815	Open in IMG/M
3300016341\|Ga0182035_11419680	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300016357\|Ga0182032_10055321	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300016357\|Ga0182032_10409401	Not Available	1099	Open in IMG/M
3300016357\|Ga0182032_11375111	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300016371\|Ga0182034_11634764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	566	Open in IMG/M
3300016404\|Ga0182037_10681156	Not Available	879	Open in IMG/M
3300016404\|Ga0182037_12015754	Not Available	518	Open in IMG/M
3300016422\|Ga0182039_10568463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	987	Open in IMG/M
3300016445\|Ga0182038_10115143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1985	Open in IMG/M
3300016445\|Ga0182038_10755876	Not Available	850	Open in IMG/M
3300021560\|Ga0126371_10152245	All Organisms → cellular organisms → Bacteria → Proteobacteria	2375	Open in IMG/M
3300026551\|Ga0209648_10304013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300027288\|Ga0208525_1023081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300027655\|Ga0209388_1132020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	710	Open in IMG/M
3300027874\|Ga0209465_10044188	All Organisms → cellular organisms → Bacteria → Proteobacteria	2122	Open in IMG/M
3300028536\|Ga0137415_11460517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031546\|Ga0318538_10037222	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300031546\|Ga0318538_10681581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	557	Open in IMG/M
3300031549\|Ga0318571_10098328	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300031549\|Ga0318571_10319449	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031561\|Ga0318528_10049826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2116	Open in IMG/M
3300031561\|Ga0318528_10685545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	548	Open in IMG/M
3300031564\|Ga0318573_10072737	All Organisms → cellular organisms → Bacteria → Proteobacteria	1721	Open in IMG/M
3300031564\|Ga0318573_10235068	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031572\|Ga0318515_10635581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	566	Open in IMG/M
3300031573\|Ga0310915_11162925	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031640\|Ga0318555_10387534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300031668\|Ga0318542_10632973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	558	Open in IMG/M
3300031681\|Ga0318572_10058201	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300031682\|Ga0318560_10722296	Not Available	538	Open in IMG/M
3300031713\|Ga0318496_10657759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	578	Open in IMG/M
3300031723\|Ga0318493_10545410	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300031723\|Ga0318493_10664995	Not Available	583	Open in IMG/M
3300031736\|Ga0318501_10504865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300031744\|Ga0306918_10384270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300031747\|Ga0318502_10872652	Not Available	546	Open in IMG/M
3300031768\|Ga0318509_10478221	Not Available	696	Open in IMG/M
3300031769\|Ga0318526_10326222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031779\|Ga0318566_10517874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	583	Open in IMG/M
3300031795\|Ga0318557_10068035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1533	Open in IMG/M
3300031796\|Ga0318576_10523434	Not Available	559	Open in IMG/M
3300031796\|Ga0318576_10527996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300031797\|Ga0318550_10599816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	529	Open in IMG/M
3300031805\|Ga0318497_10413697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	754	Open in IMG/M
3300031819\|Ga0318568_10013193	All Organisms → cellular organisms → Bacteria	4332	Open in IMG/M
3300031819\|Ga0318568_11062171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	500	Open in IMG/M
3300031832\|Ga0318499_10158527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300031832\|Ga0318499_10240265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300031859\|Ga0318527_10343088	Not Available	636	Open in IMG/M
3300031880\|Ga0318544_10018896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2290	Open in IMG/M
3300031880\|Ga0318544_10141644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	919	Open in IMG/M
3300031890\|Ga0306925_11351307	Not Available	705	Open in IMG/M
3300031890\|Ga0306925_12216294	Not Available	510	Open in IMG/M
3300031896\|Ga0318551_10725831	Not Available	576	Open in IMG/M
3300031912\|Ga0306921_11394333	Not Available	771	Open in IMG/M
3300031942\|Ga0310916_10014333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5415	Open in IMG/M
3300031942\|Ga0310916_10531243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300031946\|Ga0310910_10499743	Not Available	965	Open in IMG/M
3300031946\|Ga0310910_10526662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300031946\|Ga0310910_11209995	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031947\|Ga0310909_11005198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300031954\|Ga0306926_10872826	Not Available	1079	Open in IMG/M
3300031959\|Ga0318530_10035310	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300031981\|Ga0318531_10278637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	755	Open in IMG/M
3300032001\|Ga0306922_11505638	Not Available	672	Open in IMG/M
3300032035\|Ga0310911_10746660	Not Available	566	Open in IMG/M
3300032039\|Ga0318559_10379733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300032041\|Ga0318549_10210414	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300032043\|Ga0318556_10011971	All Organisms → cellular organisms → Bacteria → Proteobacteria	3665	Open in IMG/M
3300032059\|Ga0318533_10555989	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300032059\|Ga0318533_10699996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300032063\|Ga0318504_10214844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300032066\|Ga0318514_10171008	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300032067\|Ga0318524_10331492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	789	Open in IMG/M
3300032067\|Ga0318524_10374516	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300032068\|Ga0318553_10621521	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300032261\|Ga0306920_100789628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300032261\|Ga0306920_101119755	Not Available	1141	Open in IMG/M
3300032261\|Ga0306920_101262187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300033289\|Ga0310914_10780127	Not Available	853	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.67%
Host-Associated	Host-Associated	1.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.67%
Plants	Host-Associated → Plants	1.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.67%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.33%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100289251	3300000597	Forest Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPF
JGI1027J11758_129851972	3300000789	Soil	MHPSFRTIVVSTLILIVSSTLAAAAEVRVLSVGSTQIAARVIATEFEKQTRNKVTFTIRPPFDIDKEL
AF_2010_repII_A001DRAFT_101118201	3300000793	Forest Soil	MRPSFRTIVVSTLTLILSLTLASAAEVRVLSVGSTQIAAKAIATEFE
Ga0066395_100413744	3300004633	Tropical Forest Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPFDIDK
Ga0066869_100294022	3300005165	Soil	MHLAFRTIAVSTLALIISSTLAPAAEVRVLSVGSTQAAAKAIAADFE
Ga0066677_107343741	3300005171	Soil	MHLSFCAIAVSTLTLIVSSTLAPAAEVRVLSVGSTQIAAKAIAGEFEKQTGHKVIFTIRPPFNI
Ga0066388_1017178421	3300005332	Tropical Forest Soil	MGLSFRTIVASILTLLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTI
Ga0066388_1033349692	3300005332	Tropical Forest Soil	MHPSFRTIVVSTFIFIVSSTLAAAAEVRVLSVGSTQIAARVIATEFEKQTRNKVTFTIRPPFDIDK
Ga0008090_100624472	3300005363	Tropical Rainforest Soil	MRLFFRTIAVSGLTLIASSPLASAAEVRVLSVGSTQIAAKAIATEFEKQ
Ga0008090_102448431	3300005363	Tropical Rainforest Soil	MRPSFRTIVVSTLILIVSSTLAAEVRVLSVGSTQIAAKAI
Ga0070706_1004049931	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHPSFRTIVVSTLILIVSSTLAAAAEVRVLSVGSTQIAARVIATEFEKQTRNKVTFTIRPPFDIDKELA
Ga0066670_110390711	3300005560	Soil	LRSSCQHDTLIVSSTLATAAEVRVLSVGLTQIAAKAIPPEFEKQTVHKVTFNIDKQSERTFDAVILSV
Ga0066905_1014029912	3300005713	Tropical Forest Soil	MRPSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAARAIATEFEKQTRH
Ga0066903_1038012221	3300005764	Tropical Forest Soil	MRLFFRTIAVSGLTLIVSWTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSI
Ga0066903_1039519171	3300005764	Tropical Forest Soil	MRLSFCTIVVSMLTLLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFNIDKELAEKTFDAVIL
Ga0066903_1053009071	3300005764	Tropical Forest Soil	MCASLHTTALTAVTLIVSCALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPF
Ga0066903_1063404262	3300005764	Tropical Forest Soil	MRLSFRPITVSVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSI
Ga0066903_1068407892	3300005764	Tropical Forest Soil	MRPSFRTIVVSTLTLIVSSTLASAAEVRVLSVGSTQIAAKAIANEFEKQTRHKVTFTIRPPF
Ga0070716_1004030702	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHPSFRTIVVSTFILIVSSTLAAAADVRVLSVGSTQIAARVIATEFEKQTRNKVTFTIRPPFDIDKELAEKTFDAVI
Ga0066660_107163011	3300006800	Soil	MHLSFCAIAVSMLTLIVSSTLAPAAEVRVLSVGSTQIAAKAIAGDFEKQI
Ga0075434_1019115581	3300006871	Populus Rhizosphere	MRLFFRIALSGLTLIASLTLATAAEVRVLSVGSTQIAAKAIAAEFAKQTGQHKVTFTIRPPFDIDKELA
Ga0075424_1021101632	3300006904	Populus Rhizosphere	MHLTFRTIAVSTLALIISSTLAPAAEVRVLSVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDK
Ga0099792_109824262	3300009143	Vadose Zone Soil	MHLAFRTIAVSTLALIISSTLAPATEVRVLSVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFDAVI
Ga0126374_107462232	3300009792	Tropical Forest Soil	MHLAFCTIAVSTLALIISSTLAPAAEVRVLSVGSTQVAAKAIAADFEKQTGNQVAFTIRAPFEIDK*
Ga0126380_115945321	3300010043	Tropical Forest Soil	MHLSFCVVAVSTITLIVSSTLAPAAEVRVLSDESTQIAAKAIATEFEKETGHKVLLFAH
Ga0126370_123582311	3300010358	Tropical Forest Soil	MRLFFRPIAASVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIAAEF
Ga0126370_124059511	3300010358	Tropical Forest Soil	MRLFFRSIAVSGFTLIASSILAIAAELRMLSLGSTQIAAKAIAAEFEKQTGHKVTFTIRPPPQWTGKILAC*
Ga0126376_101706501	3300010359	Tropical Forest Soil	MRLFFRPIAVSVLTLIGSSTLASAAEVRVLSVGSTRIAAKAIATEFEKQTGHKVT
Ga0126378_111847492	3300010361	Tropical Forest Soil	MHLAFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEFEKQTGHKVTFTIRPPFNIDKGLAEKTFDA
Ga0126379_110851811	3300010366	Tropical Forest Soil	MPTAAFLEDIMSQSFRTIVVSTLTLIVSSILATAAEVRVLSVGSTQIAARAIATEFEKQTRHKVTFT
Ga0126379_126268591	3300010366	Tropical Forest Soil	VRIPSSTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELA
Ga0126379_133889592	3300010366	Tropical Forest Soil	VTTAEFLEDIMRPSVRTIAVSTLTLIVSSTLATAADVRVLSVGSTQIAAKAIAAEFERETGHKV
Ga0126379_135637821	3300010366	Tropical Forest Soil	MRLFFCTTAVSTLTLIISSAPALAAEVRVLSIGSTQIA
Ga0126381_1005551761	3300010376	Tropical Forest Soil	VRIPSSTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPP
Ga0126381_1006972982	3300010376	Tropical Forest Soil	MRLFFRTIAVSGLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTSNKVTFTIRPPFDIDK
Ga0124850_10168986	3300010863	Tropical Forest Soil	MRPSFRTIAVSTLTLIVAPTLATAAEVRVLSVGSTQ
Ga0124850_10226871	3300010863	Tropical Forest Soil	MRPSFRTIAVSTLTLIVAPTLATAAEVRVLSVGSDRR
Ga0137363_110554402	3300012202	Vadose Zone Soil	MTTAAFLEDIMSQSFRTIVVSTLTLIVSSILATAAEFRVLSVGSTQIAARAIATEFEKQTRH
Ga0137378_106884511	3300012210	Vadose Zone Soil	MHLSFCAIAVSTLTLIVSSTLAPAAEVRVLSVGSTQIAAKAIAAEFEKQTGHKVIFTIRPQFNIDKE
Ga0137360_117046921	3300012361	Vadose Zone Soil	MRLFFRIALSGLTLIASLTLATAAEVRVLSVGSTQIAAKAIAAEF
Ga0126375_107856042	3300012948	Tropical Forest Soil	MTTAAFLEDIMRLSFCTIVVSMLTLLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVPFTIRPPFNIDKELAE
Ga0126375_120669072	3300012948	Tropical Forest Soil	MTTAAFLKDIMHLAFRTIAVSTLTLIVSSTLAPAAQVRVLSVGSTQVAAKAIAADFEKQTRNQATFTIRPPFDIDK
Ga0126369_109442171	3300012971	Tropical Forest Soil	MRLFFRPITVSVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSIRPPF
Ga0182041_117201252	3300016294	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIA
Ga0182033_106013161	3300016319	Soil	MRATALTAMTLIASPVLATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVAFTIRAPFEIDKELAAKTFDAIIL
Ga0182033_115435932	3300016319	Soil	MRLFFRTIAVSGLTLTVSSTLASAAEVRVLSVGSTRIAAKAIATEFEKQTGHKVTFSIRPPFDIDKELAEK
Ga0182035_108240462	3300016341	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSI
Ga0182035_114196802	3300016341	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFDIDK
Ga0182032_100553213	3300016357	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTSRPPFDIDKELDGQSR
Ga0182032_104094013	3300016357	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSIRPPF
Ga0182032_113751112	3300016357	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFSIRPPF
Ga0182034_116347641	3300016371	Soil	MRLFFRTIAVSGLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTF
Ga0182037_106811563	3300016404	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQIAAKAI
Ga0182037_120157541	3300016404	Soil	MRPSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAA
Ga0182039_105684632	3300016422	Soil	MRLFFCTTAVSRLTLIISSAPALAAEVRVLSVGSTQIAAKAIATEFERETRHKVTFTIRPPFDI
Ga0182038_101151434	3300016445	Soil	MSQSFRTIVVSTLTLIVSSILATAAEVRVLSVGSTQIAARAIATEFEKQTRNEVTFTIRPPFDIDKELAEK
Ga0182038_107558763	3300016445	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEK
Ga0126371_101522451	3300021560	Tropical Forest Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVFSVGSTQIAAKAIATEFEKQTRHK
Ga0209648_103040132	3300026551	Grasslands Soil	MHLTFRTIAVSTLALIISSTLAPAAEVRVLSVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFD
Ga0208525_10230811	3300027288	Soil	MHLAFRTIAVSTLALIISSTLAPATEVRVLSVGSTQVAAKAIAADFEKQTRNQVTFTIRP
Ga0209388_11320201	3300027655	Vadose Zone Soil	MRASLHTTALTALTLIASFALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTLRPPFDIDKELGEKTFD
Ga0209465_100441881	3300027874	Tropical Forest Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPFDIDKEL
Ga0137415_114605171	3300028536	Vadose Zone Soil	MSQSFRTIVVSTLTLIVSSILATAAEVRVLSVGSTQIAARAIATEFEKQTR
Ga0318541_106517061	3300031545	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDK
Ga0318538_100113428	3300031546	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELG
Ga0318538_100372222	3300031546	Soil	MRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKELDGQSR
Ga0318538_106815811	3300031546	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFT
Ga0318571_100983281	3300031549	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFDIDKELAEKTF
Ga0318571_103194492	3300031549	Soil	MRLFFRTIAVSGLTLVVSSTVTSAAEVRVLSVGSTQIAAKAIATEFEKQTSNKVTFTIRP
Ga0318528_100498261	3300031561	Soil	MSQSFRTIVVSTLTLIVSSILATAAEVRVLSVGSTQIAARAIATEFEKQTRHKVT
Ga0318528_106855451	3300031561	Soil	MRLFFRTIAVSGLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTGHKLTFTIRPPFD
Ga0318573_100727372	3300031564	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKELDGQSR
Ga0318573_102350681	3300031564	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFDIDKE
Ga0318515_106355811	3300031572	Soil	MRPSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNQVTFTIRPPFD
Ga0310915_111629251	3300031573	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIA
Ga0318555_103875341	3300031640	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFT
Ga0318555_105147222	3300031640	Soil	MCASLHTTVLTALTLIALSALATAAEVRVLTVGSTQVAAKAIAADFEKLTRNQ
Ga0318542_106329731	3300031668	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTF
Ga0318572_100582011	3300031681	Soil	MRLFFRPIAVSVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIAAEFEKQSSHKVTFTIRAPFDIDKELAEKTFDAVIL
Ga0318560_103754641	3300031682	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNKV
Ga0318560_107222962	3300031682	Soil	ALTLIASSVLATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVAFTIRAPFEIDKELAAKTFDAIIL
Ga0318496_103872232	3300031713	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQV
Ga0318496_106577591	3300031713	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPFDIDKELASKAFDAVILS
Ga0306917_111982261	3300031719	Soil	MRASLHTTALTALTLIAASAHATAAEVRVLTVGSTQLAAKAIATDFEKQTRNQVTFTIR
Ga0318493_104251291	3300031723	Soil	MCASLHTIALTALTLIASSALTTAAEVRVLTVGSTQVAAKAIAADFEMQTRNQVT
Ga0318493_105454101	3300031723	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFD
Ga0318493_106649951	3300031723	Soil	MRLFFRPITVSVLTLIVSSTLASAAEVRALSVGSTQIAAKAIATEFEKQTGHKVTFSIRPPFDIDKELAEKAFDAVI
Ga0318501_105048652	3300031736	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFDA
Ga0306918_103842702	3300031744	Soil	MHLVFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEFEKQTAHKVTFTIR
Ga0318502_108726521	3300031747	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKT
Ga0318554_103772321	3300031765	Soil	MCASLHTTVLTALTLIALSALATAAEVRVLTVGSTQVAAKAIAADFEKLTRNQVTFTI
Ga0318509_104782212	3300031768	Soil	LHTTALTALTLIASSALAIAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFCHHPLGTGDGLP
Ga0318526_103262221	3300031769	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRP
Ga0318566_105178742	3300031779	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFDIDKELA
Ga0318529_100399561	3300031792	Soil	MRASLHTTALTALTLIAASAHATAAEVRVLTVGSTQLAAKAIATDFEKQTRNQVTFTIRPPFDID
Ga0318557_100680353	3300031795	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKELAEKTF
Ga0318576_102805641	3300031796	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTI
Ga0318576_105234342	3300031796	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPFDIDKELVSKAFDAV
Ga0318576_105279962	3300031796	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRP
Ga0318550_105998162	3300031797	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTF
Ga0318497_104136971	3300031805	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNKVTFTIRPPFDIDKELAEKTF
Ga0318568_100131931	3300031819	Soil	MRLFFRTIAVSGLTLLVSSTLASAAEVRVLSVGSTQIAAKA
Ga0318568_107045111	3300031819	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFD
Ga0318568_110621712	3300031819	Soil	MSQSFRTIVVSTLTLIVSSILATAAEVRVLSVGSTQIAARAIATEFEKQTRHK
Ga0318567_101407543	3300031821	Soil	MRASLHTTALTALTLIAASAHATAAEVRVLTVGSTQLAAKAIATDFEKQTRNQVTFTIRPPFD
Ga0318567_102270882	3300031821	Soil	MCASLHTTVLTALTLIALSALATAAEVRVLTVGSTQVAAKAIAADFEKLTRNQVTFTIRPPFDID
Ga0318499_101585272	3300031832	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTLRPPFD
Ga0318499_102402652	3300031832	Soil	MRLFFCTTAVSTLTLIISSAPALAAEVRVLSIGSTQIAAKAIATEFERETRRKVTFT
Ga0318527_103430881	3300031859	Soil	RSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKELDGQSR
Ga0318544_100188961	3300031880	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKV
Ga0318544_101416441	3300031880	Soil	MRPSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTHHKVTFTIRPPFDISKELAEKAFDAV
Ga0318544_102253121	3300031880	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQ
Ga0306925_106403751	3300031890	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDK
Ga0306925_113513071	3300031890	Soil	MRLSFRTVVISMLTPLVSWTLTSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFNI
Ga0306925_122162941	3300031890	Soil	MRQSFRTIVVSTLALIVSSILATAAEVRVLSVGSTQIAARAIAT
Ga0318551_107258311	3300031896	Soil	MHLVFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEFEKQTAHKVTFTIRPPFNIDKGLAERTFDAVILSV
Ga0306923_111848722	3300031910	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQARNQVTFTIRPPFDIDK
Ga0306923_115807262	3300031910	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRN
Ga0306921_113943332	3300031912	Soil	MRLSFRTVVISMLTPLVSWTLTSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFNIDKELAEKTFDAVILS
Ga0310916_100143339	3300031942	Soil	MRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIEKT
Ga0310916_105312431	3300031942	Soil	MHLVFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEF
Ga0310910_104997432	3300031946	Soil	MHPSFRTMVVSTLTLMISSTLATAAELRMLSLGSTQIAAKAIAAEFEKQTGHKVTFTIRPPPQ
Ga0310910_105266621	3300031946	Soil	MRLSFRAIAVSALTLITLSTLATAAEVRVLSVGSTQIAAKAIAAEFEKQTG
Ga0310910_112099951	3300031946	Soil	MRLFFRTIAVSGLTLTVSSTLASAAEVRVLSVGSTRIAAKAIATEFEKQTGHKVTFSI
Ga0310909_110051981	3300031947	Soil	MTTASLLEDIMRLSFRTIAVSMLTLMVSSTLATAAEVRVLSVGSTQIAAKAIAAEFETQTGHKVIFTIRPPFN
Ga0306926_108728261	3300031954	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTG
Ga0318530_100353101	3300031959	Soil	MRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTSNKVTF
Ga0318531_102786371	3300031981	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKELAEKTFD
Ga0318531_105505722	3300031981	Soil	MRASLHTTALTALTLIAASAHATAAEVRVLTVGSTQLAAKAIATDFEKQTRNQVTFTIRR
Ga0306922_115056381	3300032001	Soil	MRLSFRTVVISMLTPLVSSTLASAAEVRVLSVGSTQI
Ga0306922_119341711	3300032001	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRP
Ga0310911_107466602	3300032035	Soil	MRPSFRTIVVSTLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTI
Ga0318559_103797332	3300032039	Soil	MRPSVRTIAVSTLTLIVSSTLATAADVRVLSVGSTQIAAKAIAAEFERETGHK
Ga0318549_102104142	3300032041	Soil	MRLFFRPIAVSVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTHHKVTFTIRPPFDI
Ga0318556_100119711	3300032043	Soil	MRLFFRPIAVSVLTLIVSSTLVSAAEVRVLSVGSTQIAAKAIATEFEKQTGHKVTFTIRPPFDIDKELAEKT
Ga0318533_100382878	3300032059	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQARNQVTFTIR
Ga0318533_105559891	3300032059	Soil	LIASSVLATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVAFTIRAPFEIDKELAAKTFDAIIL
Ga0318533_106999962	3300032059	Soil	MATAAFLEDIMRSSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKEL
Ga0318504_102148442	3300032063	Soil	MHLVFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEFEKQTAHKVT
Ga0318514_101710082	3300032066	Soil	MRLSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTRHKVTFTIRPPFDIDKE
Ga0318524_103314921	3300032067	Soil	MRPSFRTIVVSTLTLIVSSTLATAAEVRVLSVGSTQIAAKAIATEFEKQTHHKVTFTIRP
Ga0318524_103745162	3300032067	Soil	MRLFFCTTAVSRLTLIISSAPALAAEVRVLSVGSTQIAAKAIATEFERETRHK
Ga0318553_106215212	3300032068	Soil	MRLFFRPITVSVLTLIVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTG
Ga0318540_103448222	3300032094	Soil	MCASLHTTALTALTLIASSALATATEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPF
Ga0318540_103849591	3300032094	Soil	MRASLHTTALTALTLIASSVLATAAEVRVLTVGSTQVAAKAIAADFEKQTRNQVTFTIRPPFDIDKE
Ga0318540_106532001	3300032094	Soil	MCASLHTTALTALTLIVSSALATAAEVRVLTVGSTQVAAKAIAADFEKQARNQVTFTI
Ga0306920_1007896282	3300032261	Soil	MRPSFRTIVVSTLTLILSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTRNKVTFTIRPPFDIDKELDGQSR
Ga0306920_1011197551	3300032261	Soil	MHLSFRTIVVSMFTLFVSSTLASAAEVRVLSVGSTQIAAKAIATEFEKQTG
Ga0306920_1012621871	3300032261	Soil	MHLVFRTIAVSTLTLIVSSTLAAAAEVRVLSVGSTQIAAKGIAGEFEKQTAHKVTFTIRPPFNIDKG
Ga0310914_107801271	3300033289	Soil	MRLSFRTVVISMLTPLVSWTLTSAAEVRVLSVGSTQIAAKAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047272

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences