Metagenome / Metatranscriptome Family F047261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047261
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	46 residues
Representative Sequence	VLPVYRYEGLEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Number of Associated Samples	112
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.00 %
% of genes near scaffold ends (potentially truncated)	72.00 %
% of genes from short scaffolds (< 2000 bps)	90.67 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.667 % of family members)
Environment Ontology (ENVO)	Unclassified (34.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.33% β-sheet: 0.00% Coil/Unstructured: 54.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00805	Pentapeptide	8.00
PF04392	ABC_sub_bind	2.00
PF09948	DUF2182	2.00
PF03401	TctC	1.33
PF00589	Phage_integrase	1.33
PF13676	TIR_2	1.33
PF05154	TM2	1.33
PF13751	DDE_Tnp_1_6	0.67
PF00561	Abhydrolase_1	0.67
PF10088	DUF2326	0.67
PF13683	rve_3	0.67
PF12760	Zn_Tnp_IS1595	0.67
PF02518	HATPase_c	0.67
PF03602	Cons_hypoth95	0.67
PF13281	MAP3K_TRAF_bd	0.67
PF01068	DNA_ligase_A_M	0.67
PF01370	Epimerase	0.67
PF05065	Phage_capsid	0.67
PF17200	sCache_2	0.67
PF04551	GcpE	0.67
PF13181	TPR_8	0.67
PF13414	TPR_11	0.67
PF00436	SSB	0.67
PF00872	Transposase_mut	0.67
PF00211	Guanylate_cyc	0.67
PF08327	AHSA1	0.67
PF00578	AhpC-TSA	0.67
PF07859	Abhydrolase_3	0.67
PF00581	Rhodanese	0.67
PF13561	adh_short_C2	0.67
PF00072	Response_reg	0.67
PF01925	TauE	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	8.00
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.00
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.33
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	1.33
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.67
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.67
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.67
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.67
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.67
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.67
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	0.67
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.67
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.67
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.67
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.67
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.67
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	0.67
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.67
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
All Organisms	root	All Organisms	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
cellular organisms	root	All Organisms → cellular organisms	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.33 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.33 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.00 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.33 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.33 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.67 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.00 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.00 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.33 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.67 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.67 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.67 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.00 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	2.00 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.33 %
Hapalosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Hapalosiphonaceae	0.67 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.67 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.67 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.67 %
Dongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia	0.67 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.67 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.00 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2.00 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.33 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	1.33 %
unclassified Dongia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia	0.67 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.67 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.67 %
Fischerella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Hapalosiphonaceae → Fischerella	0.67 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	0.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.67 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.00 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2.00 %
Methylobacterium sp. 37f	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 37f	1.33 %
Paludisphaera rhizosphaereae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera rhizosphaereae	0.67 %
Bradyrhizobium sp. 141	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 141	0.67 %
Bradyrhizobium sp. 186	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	0.67 %
Tardiphaga sp. OK246	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. OK246	0.67 %
Fischerella muscicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Hapalosiphonaceae → Fischerella → Fischerella muscicola	0.67 %
Dongia sp. URHE0060	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia → Dongia sp. URHE0060	0.67 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.67 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.67 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02IJ74R	Not Available	509	Open in IMG/M
2170459016\|G1P06HT02IBVAS	Not Available	539	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10072997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	867	Open in IMG/M
3300005174\|Ga0066680_10051036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2429	Open in IMG/M
3300005332\|Ga0066388_106113526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 37f	608	Open in IMG/M
3300005332\|Ga0066388_108165926	Not Available	523	Open in IMG/M
3300005363\|Ga0008090_10108374	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300005436\|Ga0070713_101236799	Not Available	723	Open in IMG/M
3300005511\|Ga0077121_10797075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
3300005557\|Ga0066704_10070369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2251	Open in IMG/M
3300005559\|Ga0066700_10184123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1435	Open in IMG/M
3300005713\|Ga0066905_100269084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1320	Open in IMG/M
3300005764\|Ga0066903_100047882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5159	Open in IMG/M
3300005764\|Ga0066903_101436652	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300005764\|Ga0066903_102348052	Not Available	1031	Open in IMG/M
3300005764\|Ga0066903_102544078	Not Available	992	Open in IMG/M
3300005764\|Ga0066903_103800878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300005764\|Ga0066903_104317765	Not Available	760	Open in IMG/M
3300005764\|Ga0066903_108025909	Not Available	541	Open in IMG/M
3300005844\|Ga0068862_101734085	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006049\|Ga0075417_10517256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300006173\|Ga0070716_101124102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Hapalosiphonaceae → Fischerella → Fischerella muscicola	628	Open in IMG/M
3300006174\|Ga0075014_101020977	Not Available	502	Open in IMG/M
3300006175\|Ga0070712_100536405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	985	Open in IMG/M
3300006176\|Ga0070765_101266621	Not Available	696	Open in IMG/M
3300006176\|Ga0070765_102221836	Not Available	512	Open in IMG/M
3300006755\|Ga0079222_11787572	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006791\|Ga0066653_10613445	Not Available	554	Open in IMG/M
3300009100\|Ga0075418_11745970	Not Available	677	Open in IMG/M
3300009143\|Ga0099792_10207359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300009146\|Ga0105091_10603183	Not Available	567	Open in IMG/M
3300009148\|Ga0105243_11323284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300009522\|Ga0116218_1173757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300009826\|Ga0123355_10653479	Not Available	1226	Open in IMG/M
3300009826\|Ga0123355_11058678	Not Available	851	Open in IMG/M
3300010041\|Ga0126312_11139309	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010043\|Ga0126380_11486240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	599	Open in IMG/M
3300010046\|Ga0126384_11405662	Not Available	651	Open in IMG/M
3300010046\|Ga0126384_11650801	Not Available	605	Open in IMG/M
3300010047\|Ga0126382_10889330	Not Available	769	Open in IMG/M
3300010049\|Ga0123356_10264816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1805	Open in IMG/M
3300010358\|Ga0126370_10944230	Not Available	782	Open in IMG/M
3300010359\|Ga0126376_12509820	Not Available	563	Open in IMG/M
3300010359\|Ga0126376_12750616	Not Available	541	Open in IMG/M
3300010362\|Ga0126377_10442739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1320	Open in IMG/M
3300010366\|Ga0126379_13655391	Not Available	515	Open in IMG/M
3300010375\|Ga0105239_11239013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	860	Open in IMG/M
3300010376\|Ga0126381_103261431	Not Available	641	Open in IMG/M
3300010376\|Ga0126381_103560625	Not Available	611	Open in IMG/M
3300010376\|Ga0126381_104756742	Not Available	522	Open in IMG/M
3300010376\|Ga0126381_104906833	Not Available	514	Open in IMG/M
3300010398\|Ga0126383_10220850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1836	Open in IMG/M
3300010398\|Ga0126383_12645215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300010868\|Ga0124844_1028645	All Organisms → cellular organisms → Bacteria → Proteobacteria	1746	Open in IMG/M
3300010868\|Ga0124844_1202268	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300010937\|Ga0137776_1410858	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300012209\|Ga0137379_10184507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1999	Open in IMG/M
3300012209\|Ga0137379_10370590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1341	Open in IMG/M
3300012209\|Ga0137379_11319175	All Organisms → cellular organisms → Bacteria → Terrabacteria group	627	Open in IMG/M
3300012212\|Ga0150985_122894476	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012362\|Ga0137361_10384828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1288	Open in IMG/M
3300012469\|Ga0150984_108563907	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012683\|Ga0137398_10096448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1852	Open in IMG/M
3300012685\|Ga0137397_10028986	All Organisms → cellular organisms → Bacteria → Proteobacteria	3931	Open in IMG/M
3300012961\|Ga0164302_10190605	Not Available	1251	Open in IMG/M
3300012971\|Ga0126369_12245052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 37f	633	Open in IMG/M
3300012987\|Ga0164307_11818432	Not Available	516	Open in IMG/M
3300014326\|Ga0157380_11811660	Not Available	670	Open in IMG/M
3300014969\|Ga0157376_11256797	Not Available	770	Open in IMG/M
3300015372\|Ga0132256_100116266	All Organisms → cellular organisms → Bacteria → Proteobacteria	2631	Open in IMG/M
3300015373\|Ga0132257_100017688	All Organisms → cellular organisms → Bacteria → Proteobacteria	7425	Open in IMG/M
3300016270\|Ga0182036_11525520	Not Available	561	Open in IMG/M
3300016294\|Ga0182041_10050127	Not Available	2819	Open in IMG/M
3300016294\|Ga0182041_11306663	Not Available	664	Open in IMG/M
3300016319\|Ga0182033_10110179	Not Available	2046	Open in IMG/M
3300016319\|Ga0182033_11379230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	634	Open in IMG/M
3300016319\|Ga0182033_11878101	Not Available	544	Open in IMG/M
3300016357\|Ga0182032_11203762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300016357\|Ga0182032_11357666	Not Available	615	Open in IMG/M
3300016371\|Ga0182034_11612175	Not Available	570	Open in IMG/M
3300016371\|Ga0182034_11738150	Not Available	549	Open in IMG/M
3300016387\|Ga0182040_11592920	Not Available	556	Open in IMG/M
3300016404\|Ga0182037_10610358	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300016404\|Ga0182037_10745085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	841	Open in IMG/M
3300016404\|Ga0182037_11319572	Not Available	636	Open in IMG/M
3300016422\|Ga0182039_10192751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1619	Open in IMG/M
3300016422\|Ga0182039_10215987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300016422\|Ga0182039_11909543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300016445\|Ga0182038_11593160	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300017792\|Ga0163161_11751507	Not Available	551	Open in IMG/M
3300017792\|Ga0163161_12073004	Not Available	506	Open in IMG/M
3300017822\|Ga0187802_10095920	Not Available	1114	Open in IMG/M
3300017970\|Ga0187783_10741344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300017970\|Ga0187783_10909520	Not Available	634	Open in IMG/M
3300018053\|Ga0184626_10150248	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300018433\|Ga0066667_12125132	Not Available	520	Open in IMG/M
3300018481\|Ga0190271_13137725	Not Available	554	Open in IMG/M
3300019886\|Ga0193727_1124664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. OK246	732	Open in IMG/M
3300019887\|Ga0193729_1243388	Not Available	576	Open in IMG/M
3300020140\|Ga0179590_1106453	Not Available	757	Open in IMG/M
3300020581\|Ga0210399_11610294	Not Available	500	Open in IMG/M
3300020583\|Ga0210401_11547227	Not Available	520	Open in IMG/M
3300021168\|Ga0210406_11236932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300021401\|Ga0210393_11524586	Not Available	531	Open in IMG/M
3300021478\|Ga0210402_10769840	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300021479\|Ga0210410_10093669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2648	Open in IMG/M
3300021479\|Ga0210410_11033197	Not Available	711	Open in IMG/M
3300021559\|Ga0210409_10443838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia → Dongia sp. URHE0060	1158	Open in IMG/M
3300021560\|Ga0126371_10823664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1074	Open in IMG/M
3300024288\|Ga0179589_10334268	Not Available	686	Open in IMG/M
3300026089\|Ga0207648_12189086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	514	Open in IMG/M
3300031421\|Ga0308194_10224949	Not Available	618	Open in IMG/M
3300031545\|Ga0318541_10177361	Not Available	1176	Open in IMG/M
3300031545\|Ga0318541_10638883	Not Available	595	Open in IMG/M
3300031572\|Ga0318515_10385793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	750	Open in IMG/M
3300031573\|Ga0310915_10036454	Not Available	3107	Open in IMG/M
3300031708\|Ga0310686_101097600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300031708\|Ga0310686_104289406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4338	Open in IMG/M
3300031736\|Ga0318501_10430407	Not Available	715	Open in IMG/M
3300031753\|Ga0307477_11159404	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	503	Open in IMG/M
3300031781\|Ga0318547_11037676	Not Available	513	Open in IMG/M
3300031796\|Ga0318576_10043943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1912	Open in IMG/M
3300031819\|Ga0318568_10247002	Not Available	1105	Open in IMG/M
3300031833\|Ga0310917_10079625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2073	Open in IMG/M
3300031846\|Ga0318512_10104189	Not Available	1336	Open in IMG/M
3300031879\|Ga0306919_11213924	Not Available	573	Open in IMG/M
3300031880\|Ga0318544_10227423	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031890\|Ga0306925_11557363	Not Available	645	Open in IMG/M
3300031912\|Ga0306921_10009944	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera rhizosphaereae	10102	Open in IMG/M
3300031912\|Ga0306921_10944409	Not Available	976	Open in IMG/M
3300031942\|Ga0310916_11137017	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300031945\|Ga0310913_10327757	Not Available	1082	Open in IMG/M
3300031945\|Ga0310913_10455622	Not Available	908	Open in IMG/M
3300031947\|Ga0310909_10451302	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300031947\|Ga0310909_11425343	Not Available	554	Open in IMG/M
3300031954\|Ga0306926_10527219	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300032001\|Ga0306922_11692480	Not Available	626	Open in IMG/M
3300032013\|Ga0310906_10435224	Not Available	874	Open in IMG/M
3300032025\|Ga0318507_10453477	Not Available	558	Open in IMG/M
3300032035\|Ga0310911_10857911	Not Available	524	Open in IMG/M
3300032052\|Ga0318506_10400223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 141	609	Open in IMG/M
3300032055\|Ga0318575_10565663	Not Available	577	Open in IMG/M
3300032059\|Ga0318533_10642497	Not Available	779	Open in IMG/M
3300032060\|Ga0318505_10420811	Not Available	632	Open in IMG/M
3300032076\|Ga0306924_11628746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	679	Open in IMG/M
3300032076\|Ga0306924_12592938	Not Available	506	Open in IMG/M
3300032076\|Ga0306924_12643291	Not Available	500	Open in IMG/M
3300032261\|Ga0306920_100838186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1348	Open in IMG/M
3300032261\|Ga0306920_102129360	Not Available	782	Open in IMG/M
3300033289\|Ga0310914_10155255	Not Available	2021	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.33%
Host-Associated	Host-Associated	12.00%
Engineered	Engineered	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.00%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	3.33%
Arthropoda	Host-Associated → Arthropoda	2.00%
Solid Waste	Engineered → Solid Waste	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.00%
Freshwater	Environmental → Aquatic → Freshwater	1.33%
Sediment	Environmental → Aquatic → Sediment	1.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.67%
Grass	Engineered → Solid Waste → Grass	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.33%
Loam	Environmental → Terrestrial → Soil → Loam	11.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.67%
Composting	Engineered → Solid Waste → Grass → Composting	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.00%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.67%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.67%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07362170	2170459005	Grass Soil	SLYSMFEDFDPQDFHWVLPVYKYKEPKQLLATLAENVIAPAEGKVKALEERRRMIGTQLRTQ
2ZMR_02953630	2170459016	Switchgrass, Maize And Mischanthus Litter	VYRYKEHKQLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
AF_2010_repII_A1DRAFT_100729971	3300000597	Forest Soil	EWVLPVYRYEGLEPLLATLAEKVIAPAEGKVKALEERRRIIEAELTKPQ*
Ga0066680_100510364	3300005174	Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ*
Ga0066388_1061135261	3300005332	Tropical Forest Soil	YRYEGLKQLLEVLPEKVIAPAEGKVKALRKRRRLIEAELTKPQ*
Ga0066388_1081659261	3300005332	Tropical Forest Soil	YRYEGLEPLLATLMEKVIAPAEGKLRALQEKRRMIEAELTEPR*
Ga0008090_101083743	3300005363	Tropical Rainforest Soil	WKYDWVLPVYRYEGLEPLLATLAEKVIAPAEGKVKALEERRHMIEAELTRPQ*
Ga0070713_1012367993	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DYWKYDWVLPPHRYEGLAPLLATLAESVIAPAEAKVKALEERRHAIEAELTAPRALT*
Ga0077121_107970751	3300005511	Arabidopsis Rhizosphere	LPVYRYDGLEPLLAALAEKVIAPAERKVKALEERRRMIEAELIKSQ*
Ga0066704_100703692	3300005557	Soil	LLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ*
Ga0066700_101841235	3300005559	Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRRMIEA
Ga0066905_1002690843	3300005713	Tropical Forest Soil	MFKDFDPQDFHWVLPVYRYKEPEQLLATLAEKVITPAEGKVKALEQRRRMIEAELTKPQ*
Ga0066903_1000478824	3300005764	Tropical Forest Soil	VLPVYRYEGLELLLATLAEKVIAPAEAKVKALEDRRRIIEAELTKPR*
Ga0066903_1014366522	3300005764	Tropical Forest Soil	MFKDYWKYNWVLPVYRYKEPAPLADKVIAPAEGKVRALQERRRMIDAELTKPQ*
Ga0066903_1023480521	3300005764	Tropical Forest Soil	WVLTTHRYDSQMQLIADLGEKVIAPAEAKVKALEERRRMIEAELTKPQ*
Ga0066903_1025440781	3300005764	Tropical Forest Soil	MFKDYWKYDRVLPVYRYDGLEPLLATLAEGVIAPAEGKVKALEERRRLFEAQLGTQSASQ
Ga0066903_1038008781	3300005764	Tropical Forest Soil	QDFHWVLPVYRYKEPEQLLATLAEKVIAPAEGKAKALEERRRNFEAELTKPQ*
Ga0066903_1043177652	3300005764	Tropical Forest Soil	PLLATLAEKVIAPAEGKVKALEQRRRMIEAELTKPQ*
Ga0066903_1080259091	3300005764	Tropical Forest Soil	MFKDYWKYDWVLPIYRYEGTNPLLATLAEEVIVPAEEKAKALEERRRSFEAELTQASDKD
Ga0068862_1017340852	3300005844	Switchgrass Rhizosphere	DLFKYDWMLPPYRYESLDGLLATLAEKVIAPAEAKVKALEEKRRLIEAELTKSQ*
Ga0075417_105172561	3300006049	Populus Rhizosphere	MFKDYWKYDWVLKVYRYRGLKPLLAALPKHVINDSEKKVKALQKRRRRIEAELTKPQ*
Ga0070716_1011241021	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DYWKYDWVLPVYRYEGIEPLLATLAKNIIAPAEGKVKALEERRRRIETELTKPQEAS*
Ga0075014_1010209771	3300006174	Watersheds	VLPVYRYEGLEPLLATLVDKVITPAEGKVKALQERRRMIEAELTKSSKPK*
Ga0070712_1005364051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PVYRYEGIEPLLATLAEKVIAPAEGKVRTLEERRRMIEAELTKPQ*
Ga0070765_1012666212	3300006176	Soil	LLATLAENVIAPAEAKVKALEERRRMIEAELTKP*
Ga0070765_1022218362	3300006176	Soil	DYWKYDWVLPAYRYENINSLLVTLPEKVVVPAEEKVKALAERRRMIEAELNRP*
Ga0079222_117875721	3300006755	Agricultural Soil	LLKYDWVLPPHRYEELEPLLATLAKNVIAPAEAKVKALEERRQAIEAALTAQPSPG*
Ga0066653_106134452	3300006791	Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRRIEAELTKPQ*
Ga0075418_117459702	3300009100	Populus Rhizosphere	DYWKYDWVLPEYRYEGLSPLLVALREKVIAPAEAKVNELEDRRRRGRERKP*
Ga0099792_102073591	3300009143	Vadose Zone Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALQERRRMIEAELTKPQ*
Ga0105091_106031831	3300009146	Freshwater Sediment	LEPLLVSLAEKVIAPAEEKVKSLEDRRRMIEAELTKPQ*
Ga0105243_113232842	3300009148	Miscanthus Rhizosphere	EGADRPYAMFRDYWKYDWVLPVYRYEGLQQLLATLADGVITPSEIKLAALDDRRRRLEAELLSSN*
Ga0116218_11737573	3300009522	Peatlands Soil	LPIYRYEGIEPLLATLADKVIAPAEGKVKALQERRRMVEAELTKPK*
Ga0123355_106534792	3300009826	Termite Gut	MVYRYEGLEPLLATLTENVIATAEGKVKALAARRRMIEAELTKPQ*
Ga0123355_110586781	3300009826	Termite Gut	TRNTEQKVISPAEEKVKALEKRRRKIEAELNKPQ*
Ga0126312_111393093	3300010041	Serpentine Soil	LLASLADKVIAPAEAKVKALEEKRRTIEMELTKAQ*
Ga0126380_114862401	3300010043	Tropical Forest Soil	YQYEGLEPLLATLAEKVIAPAEGKVKLLEERRRFIEAELIKSS*
Ga0126384_114056621	3300010046	Tropical Forest Soil	GLGPLLATLAEKVIAPAEGKAKALQERRREFEAELTKAQ*
Ga0126384_116508012	3300010046	Tropical Forest Soil	MFKDFDPQDFHWVLPVYRYKEPEHLLATLAKNVIAPAEGKVRALEERRCLIEAQLTKPQ*
Ga0126382_108893302	3300010047	Tropical Forest Soil	LATLAEKVMAPAEEKGKAMEERRRMIEAALTKPQ*
Ga0123356_102648163	3300010049	Termite Gut	MVYRYEGLEPLLATLTENVIATAEGKVKALAARRRMIEAELTKP*
Ga0126370_109442301	3300010358	Tropical Forest Soil	LLATLAEKVIAPAEGKVTALQDRRRMIEAELTKPQ*
Ga0126376_125098201	3300010359	Tropical Forest Soil	KDLGKYEWMLPVYRYEGLEPLLATLAEKVVAAAELKVKALAERRRMIEAELTKPQ*
Ga0126376_127506161	3300010359	Tropical Forest Soil	THCYDSQMQLIADLGEKVIRPAELKVLDLQGSTSARRTIEAEPIKPQ*
Ga0126377_104427395	3300010362	Tropical Forest Soil	RYEGLDPLLIMLSEKVIAPAEAKVKALEERRRVIEAELTRPQ*
Ga0126379_136553912	3300010366	Tropical Forest Soil	DSLLTTIAENVIAPAEAKVNALQERRRMIEAELTKPR*
Ga0105239_112390132	3300010375	Corn Rhizosphere	YDWVLPVYQYEGLQPLLATLAEKVIAPAEGKVKALQERRRMIEAELIKPK*
Ga0126381_1032614312	3300010376	Tropical Forest Soil	LPVYRYDGLEPLLATLAEKVIAPAEAKVKDLAERRRMIEAELVKPR*
Ga0126381_1035606251	3300010376	Tropical Forest Soil	LATLAEKVIAPAEGKVKALQERRRMIEAELTKPQ*
Ga0126381_1047567422	3300010376	Tropical Forest Soil	DYWKYEWVLPVWRYEGLEPLLATLAEGVIAPAEAKVKELVERRRTIEAELTRPQ*
Ga0126381_1049068332	3300010376	Tropical Forest Soil	MFKDFDPHDFHWVLPVYRYKEPEQLLRTLGEPVIAPAEEKAKALEKRRRMFEAELAKPP*
Ga0126383_102208502	3300010398	Tropical Forest Soil	LFSQWYFFEAVVNSMVRDFDPQDYHWVLPVYQYKEPEQLLAALSEKVIDPAEGKAKALQKRRRMFEAELTKPH*
Ga0126383_126452151	3300010398	Tropical Forest Soil	YEGLEPLLATLAEKVIAPAEGKVKLLEERRRFIEAELIKSS*
Ga0124844_10286451	3300010868	Tropical Forest Soil	GLEPLLAALAERVVAPAEAKVNALLQERRRAFEEELTKP*
Ga0124844_12022682	3300010868	Tropical Forest Soil	RKLCPLYRYKGLEPLLAALAERVVAPAEAKVNALQERRRAFEEELTKP*
Ga0137776_14108582	3300010937	Sediment	VLPVLRYEGVEPLLATLTERVIAPAEAKVKALEERRSMIEAELIKASN*
Ga0137379_101845072	3300012209	Vadose Zone Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRHMIEAELTEPQ*
Ga0137379_103705902	3300012209	Vadose Zone Soil	EGLEPLLATLAEKVIAPAEGKVKALAERRRIIEAELTKPQ*
Ga0137379_113191752	3300012209	Vadose Zone Soil	LATLAEKVIAPAEVKVKDLEERRRIVEAELTKPQ*
Ga0150985_1228944762	3300012212	Avena Fatua Rhizosphere	LPVYRYEGLETLLAALTDKVVSPAEGKVKALEEKRRAIEAEL
Ga0137361_103848281	3300012362	Vadose Zone Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRHMIEAELTKPQ*
Ga0150984_1085639071	3300012469	Avena Fatua Rhizosphere	VLPPHRYEGLAPLLATLAESVIAPAEAKVKALEERRRAIETELTAPRTST*
Ga0137398_100964481	3300012683	Vadose Zone Soil	VLPVSRYEGLELLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ*
Ga0137397_100289861	3300012685	Vadose Zone Soil	LGIFIQLLLATLAEKVIAPAEAKVKALEGRRRAIEVELGSQ*
Ga0164302_101906051	3300012961	Soil	GLEPLLAMLAEKVIAPAEGKVNALQERRRVIEAELTKPR*
Ga0126369_122450522	3300012971	Tropical Forest Soil	WVLPVYRYEGLKQLLEVLPEKVIAPAEGKVKALRKRRRLIEAELTKPQ*
Ga0164307_118184321	3300012987	Soil	EQLLATLAENVIAPAEGKAKALEERRRKFEAELTKPQ*
Ga0157380_118116601	3300014326	Switchgrass Rhizosphere	QDFYWVLPVYQYKEAEQLLATLVEKVNDPAEAKVKALEERRRAIEVELSKPQ*
Ga0157376_112567971	3300014969	Miscanthus Rhizosphere	VLPVYRYEGLEPLRATLAEKVIAPAEGKVNALQERRRVIVAELTKPR*
Ga0132256_1001162661	3300015372	Arabidopsis Rhizosphere	DFHWVLPVYKYKEPKQLLATLAENVIAPAEGKVKDLEERRRVVERELNKPQ*
Ga0132257_10001768814	3300015373	Arabidopsis Rhizosphere	VYKYKEPKQLLATLAENVIAPAEGKVKDLEERRRVVERELNKPQ*
Ga0182036_115255202	3300016270	Soil	MFKDYWKYEWVLPVYRYEGLEPLLATLAENVIAPAEGKVKALAERRRMI
Ga0182041_100501271	3300016294	Soil	YEGLEPLLATLAEKVIVPAEGKVRALEERRRTIEAELTKPQ
Ga0182041_113066631	3300016294	Soil	KYEWVLPVYRYDGLEPLLATLADRVIAPAEGKVKALQERRRMIEAELTKTSP
Ga0182033_101101791	3300016319	Soil	HWYEGLDSLLTTIAENVIAPAEAKVNALQGRRMIEAELTKPR
Ga0182033_113792303	3300016319	Soil	FKDFDPQDFHWVLPVYRYKEPEQLLATLAENVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0182033_118781012	3300016319	Soil	YEGLEPLLATLAEKVIAPAEGKVKALAERRLMIEAELTKPQ
Ga0182032_112037622	3300016357	Soil	GLEPLLATLAEKVIAPAEGKVKALAERRRMIEVELTKPQ
Ga0182032_113576661	3300016357	Soil	GLQLLLATLVEKVIGPAEAKVKALEERRRAIEAKLTALRA
Ga0182034_116121751	3300016371	Soil	MWTFVFFSAGFPQDFHWVLPVYRYKEPEQLRAALAENVIAPAEGKAKAFEERRRKSEAELTKPQ
Ga0182034_117381502	3300016371	Soil	DWVLPPYRYEGLQLLLATLAEKVIAPAEAKVKALEESRRAIEAELTAPRA
Ga0182040_115929201	3300016387	Soil	YDWVLPPYCYEELQLLLATLVEKVIAPAEAKVKALEESRRAIEAELTAPRA
Ga0182037_106103582	3300016404	Soil	LATLGEKVIGPAEAKVKALEERRRAIEAQLTAPRA
Ga0182037_107450853	3300016404	Soil	SPPFSMFKDLGKYEWMIPIYQYEGLEPPFATLAEKVVAPAELKVKALAERRCMIEAELIKPQ
Ga0182037_113195722	3300016404	Soil	FKDFDPQDFHWVLPVYQYKEPQQLLSTLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0182039_101927513	3300016422	Soil	LEPLLAKLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0182039_102159873	3300016422	Soil	PLLATLAEKVIAPAEGKVKALAERRRMIEVELTKPQ
Ga0182039_119095431	3300016422	Soil	LLATLAEKVIAPAEGKAKALQERRRVFEAELTKAQ
Ga0182038_115931601	3300016445	Soil	YQYKEPQQLLSTLAEKVIAPAEGKVQALAERRSMIEAELTKPQ
Ga0163161_117515071	3300017792	Switchgrass Rhizosphere	DGLEPLVATMAAKVIAPAEAKVKALEERRRAIEAELTKPTG
Ga0163161_120730042	3300017792	Switchgrass Rhizosphere	VLPVYRYEGLGPLLTSLADKVIAPAEVMIKALEEKRRRIEAELTKPQ
Ga0187802_100959201	3300017822	Freshwater Sediment	QDFHWVLPVYRYKEPEQLLAKLAANVIAPAEGKVNALAERRRMIEAELTKPQ
Ga0187783_107413443	3300017970	Tropical Peatland	PLLAALAERVIAPAEAKVKALEERRRMIEAELTKAST
Ga0187783_109095201	3300017970	Tropical Peatland	EPLLATLAERVIAPAEAKVKALEERRRMIEAELTKTSP
Ga0184626_101502482	3300018053	Groundwater Sediment	VLPVYRYDGLERLVATLAEKVIDPAEGKVKALEERRRMIEAELIKPQ
Ga0066667_121251321	3300018433	Grasslands Soil	LLATLAEKVIAPAEGKVKALEERRHMIEAELTEPQ
Ga0190271_131377251	3300018481	Soil	LPVYRYEGLEPLLAALAEKIIAPAEGKVNALQERRRVIEAELTKPR
Ga0193727_11246642	3300019886	Soil	YEGLEPLLATLAEKVIAPAEGKVKALQERRRVIEAELTKPQ
Ga0193729_12433882	3300019887	Soil	VLPVYRYEGLEPLLATLAEKVIAPAEGKVKALHERRRMIEAELTKPR
Ga0179590_11064531	3300020140	Vadose Zone Soil	LLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0210399_116102943	3300020581	Soil	NSLLVTLPEKVVAPAEAKVKALVERRRMIEAELNRP
Ga0210401_115472271	3300020583	Soil	GLELLLEMLAEKVIAPAEEKVQALAERRRTIEAELTKPR
Ga0210406_112369321	3300021168	Soil	YEGIEPLLATLAEKVIAPAEGKVNALAERRRMIEAELIKPQ
Ga0210393_115245861	3300021401	Soil	DWLLPAYRYENINSLLVTLPEKVVVPAEEKVKALAERRRMIEAELNQQ
Ga0210402_107698401	3300021478	Soil	LLLEMLAEKVIAPAEEKVQALAERRRTIEAELTKPR
Ga0210410_100936694	3300021479	Soil	LLASLAERVIAPAEAKVKGLAERRRVIEAELVKPQ
Ga0210410_110331972	3300021479	Soil	VLPVYRYDGLEPLRATLVDKVITPAEGKVKALQERRRMIEAEPTKLQ
Ga0210409_104438381	3300021559	Soil	AYRYENINSLLVTLPEKVVVPAEEKVKALAERRRMIEAELNQQ
Ga0126371_108236642	3300021560	Tropical Forest Soil	LLATLAEKVIAPAEVKVKALQERRREFEAELTKAQ
Ga0179589_103342681	3300024288	Vadose Zone Soil	VLPVSRYEGLEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0207648_121890861	3300026089	Miscanthus Rhizosphere	MFRDGGNPTQSLAMLAEKVIAPAEVKVKAPQERRRVIEAELAKPR
Ga0308194_102249492	3300031421	Soil	VLPVYRYEGLEPLLATLAEKVIAPAEGKVKALHERRRMIEAE
Ga0318541_101773612	3300031545	Soil	WVLPVYQYEGLEPLLATLAEKVIVPAEGKVRALEERRRTIEAELTKPQ
Ga0318541_106388831	3300031545	Soil	VYRYEGIEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKAE
Ga0318515_103857932	3300031572	Soil	VYRYEGLEPLLAALAEKVIAPAEGKVKALQERRRMIEAELIKPQ
Ga0310915_100364543	3300031573	Soil	MFKDYWKYDWVLPVYQYEGLEPLLATLAEKVIVPAEGKVRALEERRRTIEAELTKPQ
Ga0310686_1010976004	3300031708	Soil	EPLLATLAEKVIAPAEGKVQALAERRLMIEAELTKPQ
Ga0310686_1042894061	3300031708	Soil	MFKDYWKYDWVLPVHRYEGLELLLTTLGESVIDPAEAKVNALAERRRLIEAVLIKPQ
Ga0318501_104304071	3300031736	Soil	MFKDYWKYDWVLPVYQYEGLEPLLATLAEKVIVPAEGKVRALEERRRTIEAELTKPQKGI
Ga0307477_111594042	3300031753	Hardwood Forest Soil	PLLAALAEKVIAPAEAKMKVLAEKRREFEAELIKAR
Ga0318547_110376761	3300031781	Soil	IMIPIHFYEGLEPLLATLAEKVIAPAEGKVKALAERRLMIEAELTKPQ
Ga0318576_100439432	3300031796	Soil	VLPVYRYEGLKALLATLAEKVIAPAEGKVRALEQRRRMIEAELTKPQ
Ga0318568_102470022	3300031819	Soil	RYEGLEPLLATLAEKVIAPAEGKVKVLQERRRMIEAELTKPQ
Ga0310917_100796254	3300031833	Soil	LLATLEENVIAPAEGKAKALEERRRMFEAELTKPQ
Ga0318512_101041894	3300031846	Soil	GIEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPR
Ga0306919_112139241	3300031879	Soil	VLPVYRYEGLEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKPQ
Ga0318544_102274232	3300031880	Soil	MFKDFDPQDFHWVLPVYRYKEPEQLLATLAENVISPAEGKAKALEERRRRFETELTKPQ
Ga0306925_115573631	3300031890	Soil	DWVLPVYRYEGIEPLLATLAEKVIAPAEGKVKALEERRRMIEAELTKAE
Ga0306921_1000994415	3300031912	Soil	WVLPPYRYEGLQLLLGTLVEKVIAPAEAKVKALEERRRAIEAKLTALRA
Ga0306921_109444092	3300031912	Soil	MVSAFAGVYRYEGLEPLLATLAEKVIAPAEGKVKALAERRRMIEAELTKPQ
Ga0310916_111370172	3300031942	Soil	WVLPVYRYEGLEPLLAALSKKVIAPAERKVKALEKRRRIIEAKLTKPQ
Ga0310913_103277572	3300031945	Soil	MFKDYWKYDWVLPVYQYEGLEPLLATLAEKVIVPAEGKVRALEERRRTI
Ga0310913_104556221	3300031945	Soil	MWTFVFFSAGFPQDFHWVLPVYRYKEPEQLLATLTEDVIASAEGKAKALEERRRIFEAELTKPQ
Ga0310909_104513021	3300031947	Soil	GLKPLLLTLAEKVIAPAEAKVTALEERRRAIEAELTTPRISP
Ga0310909_114253431	3300031947	Soil	PHRYEGLETLLTSIAENVIAPAEAKVNALQERRRLIEAELVKPR
Ga0306926_105272193	3300031954	Soil	KDYWKYDWVLPPYRYEGLQLLLATLVEKVIAPAEAKVKALEESRRAIEAELTAPRA
Ga0306922_116924802	3300032001	Soil	LLAAVAEKVIAPAERKVNALQERRRMIEAELTKPQ
Ga0310906_104352242	3300032013	Soil	VYRYEGLEPLLATFAEKVIAPAEGKVRALEERRRAHDLC
Ga0318507_104534771	3300032025	Soil	YEALEPLLATLAERVIAPAEAKVKALEERRRMIEAELTKTSP
Ga0310911_108579111	3300032035	Soil	LLATLAEKVIAPAEGKVRALEQRRRMIEAELTKPQ
Ga0318506_104002232	3300032052	Soil	MFKDYWKYDWVLPVYRYEGLEPLLATLAENVIAPAEGKVKALEERRCVIEAELTKPQ
Ga0318575_105656631	3300032055	Soil	SLLTTLAENVIAPAEAKVRALQERQRMIEAQLTKPQ
Ga0318533_106424973	3300032059	Soil	FKDFDPQDFHWVLPVYKYKKPKQLLATLAEYVIAPAERKVKALEERRCMIEAQLRTQ
Ga0318505_104208111	3300032060	Soil	RFEGLEPLLATLAEKVIAPAEGKVKALAERRCMIEAELTKPQ
Ga0306924_116287461	3300032076	Soil	GLEPLLAALAEKVIAPAEGKVKALEQRRRMIEAELIKPQ
Ga0306924_125929381	3300032076	Soil	HLLATLAEKVIAPAEAKVKALEESRRAIEAELTAPRS
Ga0306924_126432912	3300032076	Soil	LPPHWYEGLDSLLTTIAENVIAPAEAKVNALQGRRMIEAELTKPR
Ga0306920_1008381862	3300032261	Soil	LLATLAEKVIAPAEGKVKALEKRRRMIEAELTKPQ
Ga0306920_1021293602	3300032261	Soil	RYEGLQLLLATLAEKVIAPAEAKVKTLEESRRAFEAELTAPRS
Ga0310914_101552554	3300033289	Soil	ALLAAVAEKVIAPAERKVNALQERRRMIEAELTKPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences