Metagenome / Metatranscriptome Family F047248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	55 residues
Representative Sequence	ETLGCYEKPIIEPPGLFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Number of Associated Samples	116
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.33 %
% of genes near scaffold ends (potentially truncated)	98.67 %
% of genes from short scaffolds (< 2000 bps)	85.33 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (30.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.27% β-sheet: 0.00% Coil/Unstructured: 61.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF07690	MFS_1	69.33
PF13347	MFS_2	2.00
PF07849	DUF1641	1.33
PF07681	DoxX	0.67
PF00275	EPSP_synthase	0.67
PF05598	DUF772	0.67
PF00210	Ferritin	0.67
PF00691	OmpA	0.67
PF04055	Radical_SAM	0.67
PF07732	Cu-oxidase_3	0.67
PF05762	VWA_CoxE	0.67
PF02915	Rubrerythrin	0.67
PF04909	Amidohydro_2	0.67
PF00501	AMP-binding	0.67
PF00291	PALP	0.67
PF08240	ADH_N	0.67
PF00672	HAMP	0.67
PF00072	Response_reg	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG2427	Uncharacterized conserved protein YjgD, DUF1641 family	Function unknown [S]	1.33
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.67
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.67
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.67

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	20.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.67 %
Unclassified	root	N/A	5.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	52.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	20.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.67 %
Unclassified	root	N/A	5.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.33 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	52.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	20.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.67 %
Unclassified	root	N/A	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.67 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	20.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.67 %
Unclassified	root	N/A	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.67 %
Unclassified	root	N/A	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.67 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.67 %
Unclassified	root	N/A	5.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.67 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10769627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300002245\|JGIcombinedJ26739_101514387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300004091\|Ga0062387_100380478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	943	Open in IMG/M
3300004092\|Ga0062389_101732766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	805	Open in IMG/M
3300004092\|Ga0062389_104391893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300004121\|Ga0058882_1285425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300004152\|Ga0062386_100808732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300005533\|Ga0070734_10736419	Not Available	560	Open in IMG/M
3300005537\|Ga0070730_10860026	Not Available	570	Open in IMG/M
3300005591\|Ga0070761_10753924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300005602\|Ga0070762_10389053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300005921\|Ga0070766_11076869	Not Available	554	Open in IMG/M
3300006174\|Ga0075014_100235205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	939	Open in IMG/M
3300009623\|Ga0116133_1167985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300009644\|Ga0116121_1022451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2015	Open in IMG/M
3300009644\|Ga0116121_1306650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300009645\|Ga0116106_1151795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300009665\|Ga0116135_1012287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3024	Open in IMG/M
3300009665\|Ga0116135_1435206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300009759\|Ga0116101_1160724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300010343\|Ga0074044_10028607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3949	Open in IMG/M
3300010379\|Ga0136449_102752399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	696	Open in IMG/M
3300010937\|Ga0137776_1010513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300014156\|Ga0181518_10132680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1353	Open in IMG/M
3300014167\|Ga0181528_10738141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300014168\|Ga0181534_10374493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300014168\|Ga0181534_10486612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300014168\|Ga0181534_10996857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300014169\|Ga0181531_11009616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300014199\|Ga0181535_10030968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3986	Open in IMG/M
3300014199\|Ga0181535_10749488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300014199\|Ga0181535_10850334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	515	Open in IMG/M
3300014200\|Ga0181526_10982883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300014201\|Ga0181537_10812483	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300014201\|Ga0181537_11069815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300014489\|Ga0182018_10360382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300014493\|Ga0182016_10105860	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300014499\|Ga0182012_10320366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1041	Open in IMG/M
3300014654\|Ga0181525_10235992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M
3300014654\|Ga0181525_10574014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300014655\|Ga0181516_10362990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300014657\|Ga0181522_10190909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1204	Open in IMG/M
3300014657\|Ga0181522_10966827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300016728\|Ga0181500_1080469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300017946\|Ga0187879_10225970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300017946\|Ga0187879_10435849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300017948\|Ga0187847_10857956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300018033\|Ga0187867_10803120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300018034\|Ga0187863_10338978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	836	Open in IMG/M
3300018034\|Ga0187863_10428767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300018034\|Ga0187863_10563811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300018037\|Ga0187883_10461846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300018038\|Ga0187855_10064054	All Organisms → cellular organisms → Bacteria → Acidobacteria	2260	Open in IMG/M
3300018042\|Ga0187871_10024155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3883	Open in IMG/M
3300018042\|Ga0187871_10044583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2700	Open in IMG/M
3300018042\|Ga0187871_10768933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300018044\|Ga0187890_10186941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300019260\|Ga0181506_1082297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300019787\|Ga0182031_1560872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1965	Open in IMG/M
3300020583\|Ga0210401_11170895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	627	Open in IMG/M
3300021406\|Ga0210386_10511366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300021407\|Ga0210383_11118790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300021407\|Ga0210383_11264986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300021474\|Ga0210390_10515034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300023068\|Ga0224554_1099318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300023101\|Ga0224557_1035772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2456	Open in IMG/M
3300027394\|Ga0209904_1021784	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300027853\|Ga0209274_10234562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	937	Open in IMG/M
3300027879\|Ga0209169_10565465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300027889\|Ga0209380_10754587	Not Available	555	Open in IMG/M
3300028552\|Ga0302149_1057025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300028552\|Ga0302149_1180511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300028560\|Ga0302144_10010539	All Organisms → cellular organisms → Bacteria → Acidobacteria	3011	Open in IMG/M
3300028565\|Ga0302145_10117373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300028572\|Ga0302152_10059981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1183	Open in IMG/M
3300028759\|Ga0302224_10481418	Not Available	508	Open in IMG/M
3300028762\|Ga0302202_10444893	Not Available	594	Open in IMG/M
3300028765\|Ga0302198_10539565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300028783\|Ga0302279_10283651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300028795\|Ga0302227_10134973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	987	Open in IMG/M
3300028801\|Ga0302226_10461034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300028859\|Ga0302265_1104478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300028859\|Ga0302265_1255089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300028866\|Ga0302278_10154411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1193	Open in IMG/M
3300029883\|Ga0311327_10038731	All Organisms → cellular organisms → Bacteria	3855	Open in IMG/M
3300029907\|Ga0311329_10758128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300029908\|Ga0311341_10033950	All Organisms → cellular organisms → Bacteria	4211	Open in IMG/M
3300029913\|Ga0311362_10152058	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300029913\|Ga0311362_10404281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1334	Open in IMG/M
3300029914\|Ga0311359_10094869	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300029914\|Ga0311359_10261125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1462	Open in IMG/M
3300029916\|Ga0302148_1185265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300029917\|Ga0311326_10039638	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300029917\|Ga0311326_10155886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1224	Open in IMG/M
3300029922\|Ga0311363_10258940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2011	Open in IMG/M
3300029939\|Ga0311328_10030961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4969	Open in IMG/M
3300029939\|Ga0311328_10042769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4106	Open in IMG/M
3300029939\|Ga0311328_10495470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	859	Open in IMG/M
3300029944\|Ga0311352_11494042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300029945\|Ga0311330_10296831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1396	Open in IMG/M
3300029945\|Ga0311330_10665799	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	807	Open in IMG/M
3300029953\|Ga0311343_10066597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4354	Open in IMG/M
3300029953\|Ga0311343_10375283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1327	Open in IMG/M
3300029954\|Ga0311331_10430651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1322	Open in IMG/M
3300029954\|Ga0311331_11122168	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300029955\|Ga0311342_10173515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2128	Open in IMG/M
3300029985\|Ga0302280_1082315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1265	Open in IMG/M
3300029985\|Ga0302280_1175457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300029986\|Ga0302188_10140394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1049	Open in IMG/M
3300029988\|Ga0302190_10095719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1339	Open in IMG/M
3300029992\|Ga0302276_10072273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1935	Open in IMG/M
3300030007\|Ga0311338_11809337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300030011\|Ga0302270_10144302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1437	Open in IMG/M
3300030011\|Ga0302270_10167708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1299	Open in IMG/M
3300030041\|Ga0302274_10177836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1068	Open in IMG/M
3300030041\|Ga0302274_10352568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300030042\|Ga0302300_1213585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300030044\|Ga0302281_10382519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300030049\|Ga0302191_10269843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300030053\|Ga0302177_10555476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300030503\|Ga0311370_10792728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1093	Open in IMG/M
3300030503\|Ga0311370_11922468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300030506\|Ga0302194_10415573	Not Available	523	Open in IMG/M
3300030508\|Ga0302185_10062645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1413	Open in IMG/M
3300030520\|Ga0311372_10945109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1149	Open in IMG/M
3300030524\|Ga0311357_10728762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300030524\|Ga0311357_11782342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300030580\|Ga0311355_11104688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300030617\|Ga0311356_11787878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300030617\|Ga0311356_12040019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300030687\|Ga0302309_10358561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300030688\|Ga0311345_10621647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300030847\|Ga0075405_11471034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300030878\|Ga0265770_1093700	Not Available	603	Open in IMG/M
3300031090\|Ga0265760_10338929	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031233\|Ga0302307_10297243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	826	Open in IMG/M
3300031234\|Ga0302325_11183122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1019	Open in IMG/M
3300031234\|Ga0302325_11413405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300031241\|Ga0265325_10014024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4545	Open in IMG/M
3300031258\|Ga0302318_10084553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1382	Open in IMG/M
3300031261\|Ga0302140_10943582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300031525\|Ga0302326_11616531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	860	Open in IMG/M
3300031708\|Ga0310686_113900869	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300031715\|Ga0307476_10384769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1035	Open in IMG/M
3300031788\|Ga0302319_10102674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4089	Open in IMG/M
3300031788\|Ga0302319_10779505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300032515\|Ga0348332_13309020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300032954\|Ga0335083_10121140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2528	Open in IMG/M
3300033402\|Ga0326728_10619890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	837	Open in IMG/M
3300034065\|Ga0334827_091733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1018	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.33%
Host-Associated	Host-Associated	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.33%
Aquatic	Environmental → Aquatic	30.00%
Plants	Host-Associated → Plants	0.67%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	49.33%
Freshwater	Environmental → Aquatic → Freshwater	28.67%
Soil	Environmental → Terrestrial → Soil	19.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.67%
Sediment	Environmental → Aquatic → Sediment	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	49.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.67%
Loam	Environmental → Terrestrial → Soil → Loam	6.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	49.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.33%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	30.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.67%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.00%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.33%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.67%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.67%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107696272	3300001593	Forest Soil	ETLGCYDKPVIEPPGLFSLLSQFRHKELRRSMALINRFLEKLGSQIKLRGSCD*
JGIcombinedJ26739_1015143872	3300002245	Forest Soil	YEKPIIEPPGLFSLLVQFSHKELRRSLALLNKFLESLGNQIKLRGGCK*
Ga0062387_1003804782	3300004091	Bog Forest Soil	LGCYEKPIIEPPGLFSLMAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK*
Ga0062389_1017327661	3300004092	Bog Forest Soil	TSETLGCYQKPLIEPPGLFSLLNQFRHKELRRSVAFINRFLEKLGEQINLRGSCK*
Ga0062389_1043918931	3300004092	Bog Forest Soil	IEPPGLFSLMAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK*
Ga0058882_12854252	3300004121	Forest Soil	LQGVAVAVSETLGCYEKPIIEPPGLISLLSQFRHKELRRSMALLNKFLETLGNQIKLRGSCG*
Ga0062386_1008087321	3300004152	Bog Forest Soil	YQKPIIEPPGLFALLNQFRHKELRRSMALINRFLEALGNQIKLRGSCK*
Ga0070734_107364192	3300005533	Surface Soil	VGETFGCYEKPVIEPPGLVSLLGQFRHKELRRSMALLNKFLRSFGNQIRLRGACK*
Ga0070730_108600261	3300005537	Surface Soil	EKPIIEPPNLFSLFAQFSHKELRRSMALLNKFLESLGTQIKLRGGCK*
Ga0070761_107539242	3300005591	Soil	AAATTETLGCYQKPIVEPPGLLSLLNQFRHKELRRSIALINRFLETLGNQIKLRGNCK*
Ga0070762_103890531	3300005602	Soil	GCYEKPIIEPPGLFALMAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK*
Ga0070766_110768691	3300005921	Soil	TAASQTLGCYDKPVIEPPGLFSLLSQFRHKELRRSIALVNRFLEKLGNQIKLRGNCG*
Ga0075014_1002352051	3300006174	Watersheds	LGCYEKPIIEPPGLFTLLGQFRHKELRRSMALVNKFLVTLGDQIRLRGGC*
Ga0116133_11679852	3300009623	Peatland	CYDKPVIEPPGLFALLGQFRHKELRRSMALINRFLETLGNQIKARGGCK*
Ga0116121_10224511	3300009644	Peatland	INPDVLQCVATAASETLGCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLERLGDQIKLRGGCQ*
Ga0116121_13066501	3300009644	Peatland	TLGSYEKPVIEPPGLFSLLNQFRHPELRRSIALINRFLETLGIQLSARGDSATRH*
Ga0116106_11517951	3300009645	Peatland	RCPQGVAVAVGGTLGFDERPKSEPPCLFSHLNQFRHKELGRSIALVNRFLEKLGKQIKLRGGCK*
Ga0116135_10122873	3300009665	Peatland	VAVGGTLGFDERPKSEPPCLFSHLNQFRHKELGRSIALVNRFLEKLGKQIKLRGGCK*
Ga0116135_14352062	3300009665	Peatland	INPEVLQCVATAASDTLGCYEKPVIEPPGLFSLLSQFRHKELRRSIAFINRFLENLGTQIKLRGSCK*
Ga0116101_11607241	3300009759	Peatland	ILQGVAAAVGETLGCYDKPVIEPPGLFALLGQFRHKELRRSMALINRFLETLGNQIKARGGCK*
Ga0074044_100286074	3300010343	Bog Forest Soil	VALAVGETLGCYEKPIIEPPGLFALMAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK*
Ga0136449_1027523992	3300010379	Peatlands Soil	GCYEKPIIEAPGLFSLLGQFRRKELRRSMALVDKFLETLGNQIKLRGSCD*
Ga0137776_10105132	3300010937	Sediment	VAVAVGETLGCYEKPIIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK*
Ga0181518_101326802	3300014156	Bog	SETLGCTTKPIIEPPSLLSLLGQFRRRELRRSIALINRFLETLGNQLKSRGGCT*
Ga0181528_107381412	3300014167	Bog	DTLGCYEKPVIEPPGLFSLLNQFRHKELRRSIALVNRFLEKLGEQIKLRGGCK*
Ga0181534_103744931	3300014168	Bog	LGCYDKPVIEPPGLFSLLSQFRHKELRRSMALINRFLEKLGNQIKLRGTCS*
Ga0181534_104866121	3300014168	Bog	TSQTLGSYKKPVIEPPGLFSLLSQFRHAELRRSIALINRFLEALGIQLSARGDAATKH*
Ga0181534_109968572	3300014168	Bog	AVAVGETLGCYEKPVIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK*
Ga0181531_110096162	3300014169	Bog	QCIAEATTETLGCYQKPIIEPPGLFSLLSQFRHKELRRSIALINRFLETLGNQIKLRGSC
Ga0181535_100309681	3300014199	Bog	VAAQETLGVSRRPAIEPPGLFALLSQFRHKELRRSIALINRFLEALGIQLSARGTTEKDN
Ga0181535_107494881	3300014199	Bog	EINPEVMQCIASAAGQTLGCHEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLETLGNQIKLRGSCK*
Ga0181535_108503341	3300014199	Bog	KTLGCYQKPVIEPPGLLSLLGQFRHKELRRSIALINRFLEALGNQINLRGGCD*
Ga0181526_109828831	3300014200	Bog	YQKPVIEPPGLFALLNQFRHKELRRSMALINKFLEALGYQIKLRGECK*
Ga0181537_108124832	3300014201	Bog	YDKPIIEPPGLFSLLSQFRHKELRRSIALINRFLETLGSQIKLRGGCQ*
Ga0181537_110698152	3300014201	Bog	CYEKPVIEPPGLLSLLGQFRHKELRRSIALINRFLEKLGNQIKLRGSCK*
Ga0182018_103603821	3300014489	Palsa	TAASDTLGCYDKPIIEPPGLFSLLSQFRHKELRRSMALINRFLEKLGDQIKLRGGCK*
Ga0182016_101058601	3300014493	Bog	TETLGCYQKPVIEPPGLFSLLNQFRHKELRRSMALLNRFLDTLGNQIKLRGSCK*
Ga0182012_103203662	3300014499	Bog	GSYQKPVIEPPGLFSLLSQFRHPELRRSIALINRFLESLGIQLGHRGETDIKH*
Ga0181525_102359922	3300014654	Bog	TLGCYQKPIIEPPGLFSLLSQFRHKELRRSIALINRFLESLGNQIKLKGSCD*
Ga0181525_105740141	3300014654	Bog	NPDVLQSVAVAVGETLGCYEKPIIEPPGLFSLLLQFSHKELRRSMALLNKFLESLGNQIKLRGSCK*
Ga0181516_103629902	3300014655	Bog	GCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLEKLGNQINLRGSCK*
Ga0181522_101909092	3300014657	Bog	IEPPGLFSLLSQFRHKELRRSMALINRFLEKLGDQIKLRGGCN*
Ga0181522_109668271	3300014657	Bog	SYKKPVIEPPGLFSLLSQFRHAELRRSIALINRFLEALGIQLSARGDAATKH*
Ga0181500_10804691	3300016728	Peatland	SETLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0187879_102259702	3300017946	Peatland	EKPVIEPPGLISLLNQFRHKELRRSIALINRFLEKLGKQIKLRGGCK
Ga0187879_104358492	3300017946	Peatland	VATAASDTLGCYEKPVIEPPGLFSLLSQFRHKELRRSIAFINRFLENLGSQIKLRGGCE
Ga0187847_108579562	3300017948	Peatland	ASETLGCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLERLGDQIKLRGGCQ
Ga0187867_108031202	3300018033	Peatland	AVAVSETLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0187863_103389781	3300018034	Peatland	CVATAASDTLGCYDKPIIEPPGLFSLLSQFRHKELRRSMALINRFLEKLGDQIKLRGGCK
Ga0187863_104287672	3300018034	Peatland	ATAAGQTLGSYEKPVIEPPGLFSLLSQFRHPELRRSIALINRFLETLGIQLSARSDSATK
Ga0187863_105638111	3300018034	Peatland	AASETLGCYEKPIIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0187883_104618461	3300018037	Peatland	LGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0187855_100640544	3300018038	Peatland	LQCVATAAGETLGCYQKPVIEPPGLFSLLCQFRHKELRRSIALINRFLETLGNQIKLRGSCK
Ga0187871_100241557	3300018042	Peatland	IIEPPGLFSLLSQFRHKELRRSMALINRFLEALGNQIKLRGSCE
Ga0187871_100445831	3300018042	Peatland	YDKPVIEPPGLFSLLSQFRHKELRRSMALINRFLEKLGNQIKLRGGCK
Ga0187871_107689331	3300018042	Peatland	TLGCYQKPVIEPPGLFSLLCQFRHKELRRSIALINRFLETLGNQIKLRGSCK
Ga0187890_101869411	3300018044	Peatland	PIIGPPSLFSLMFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0181506_10822971	3300019260	Peatland	VGETLGSYKKPVIEPPGLFSLLSQFRHKELRRSIALINRFLETLGIQLSARGSSEDRN
Ga0182031_15608721	3300019787	Bog	EKPIIEPPALFSLLFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0210401_111708951	3300020583	Soil	VSQTLGCYEKPIIEPPGLFSLLGQFRHKELRRSMALVNKFLETLGNQIKLRGSCE
Ga0210386_105113662	3300021406	Soil	VSETLGCYEKPIIEPPGLVSLLSQFRHKELRRSMALLNKFLESLGNQIKLRGSCQ
Ga0210383_111187901	3300021407	Soil	EKPIIEPPGFFSLLGQFRRKELRRSMALVIKFMETLGNQINLRGECK
Ga0210383_112649862	3300021407	Soil	CYEKPVIEPPGLFSLLSQFRHKELRRSVALVNRFLEKLGNQIKLRGGCA
Ga0210390_105150341	3300021474	Soil	APQLLMPIIEPPGLVSLLSQFRHKELRRSIALLNKFLESLGNQIKLRGSCQ
Ga0224554_10993181	3300023068	Soil	QCVASAVGETLGSHEKPVIKAPGLFSLLFQFRHQELRRSISLINKFLENLGKQIKLRANS
Ga0224557_10357721	3300023101	Soil	PVIEPPGLFALLSQFRHQELRRSIALVNRFLETLGNQIKLRGSCK
Ga0209904_10217841	3300027394	Thawing Permafrost	VIEPPGIFSLLGQFRHEELRRSMALINRFLETLGNQIKLQAGCK
Ga0209274_102345622	3300027853	Soil	IIEPPGLFSLLGQFRHKELRRSMALINRFLEALGNQIKLRGSCK
Ga0209169_105654651	3300027879	Soil	GIAAAIGETLGCYEKPIIEPPGLVSLLTQFRHKELRRSMALLNKFLESLGNQIKLRGTCQ
Ga0209380_107545872	3300027889	Soil	ATAASQTLGCYDKPVIEPPGLFSLLSQFRHKELRRSIALVNRFLEKLGNQIKLRGNCG
Ga0302149_10570252	3300028552	Bog	GAINPDVLQSVAVAVSETLGCYEKPIIEPPGLFALMVQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302149_11805111	3300028552	Bog	AAATTETLGCYQKPIIEPPGLFSLLSQFRHKELRRSMALINRFLETLGNQIKLRGSCK
Ga0302144_100105393	3300028560	Bog	TTETLGCYQQPIIEPPGLFALLNQFRHKELRRSMALINRFLEALGNQIKLRGSCK
Ga0302145_101173731	3300028565	Bog	VLQSVAVAVSETLGCYEKPIIEPPSLFALLIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302152_100599811	3300028572	Bog	TLGCYEKPIIEPPGLFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302224_104814181	3300028759	Palsa	TLGCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLEKLGSQIKLRGSCE
Ga0302202_104448931	3300028762	Bog	LQSVAVAVSETLGCYEKPVIEPPGLLSLMLQFSHKELRRSMALLNKFLESLGNQIKLRGNCK
Ga0302198_105395651	3300028765	Bog	EKPIIEPPALFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302279_102836511	3300028783	Bog	AVSETLGCYEKPIIEPPGLFALMVQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302227_101349731	3300028795	Palsa	LQSVAVAVSETLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302226_104610342	3300028801	Palsa	IIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302265_11044782	3300028859	Bog	PEVLQCFAAATTETLGCYQQPIIEPPGLFALLNQFRHKELRRSMALINRFLETLGNQIKVRGSCK
Ga0302265_12550892	3300028859	Bog	PVIEPPGLFSLLSQFRHAELRRSIALINRFLEALGIQLSARGDAATKH
Ga0302278_101544112	3300028866	Bog	QSVAVAVSETLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNRFLESLGNQIKLRGGC
Ga0311327_100387311	3300029883	Bog	QKPIIEPPGLFALLGQFRHKELRRSMALINRFLEALGNQIKLRGSCD
Ga0311329_107581282	3300029907	Bog	NPDLLQCFAVATTETLGCYQKPIIEPPGLFALLGQFRHKELRRSMALINRFLEALGNQIKLRGSCD
Ga0311341_100339501	3300029908	Bog	QCFAAAATETLGCYQQPIIEPPGLFSLLNQFRHKELRRSMALINRFLEALGNQIKLRGSC
Ga0311362_101520581	3300029913	Bog	PIIEPPSLFALLIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311362_104042811	3300029913	Bog	HVLQSVAVAVGETLGCYEKPIIEPPALFSLLFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0311359_100948691	3300029914	Bog	CYQKPIIEPPGLFALLSQFRHKELRRSMALINRFLETLGNQIKLRGSCE
Ga0311359_102611252	3300029914	Bog	AVGETLGCYEKPIIEPPGLFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302148_11852651	3300029916	Bog	QCFAAATTETLGCYQKPVIEPPGLFSLLNQFRHKELRRSMALINRFLEALGNQIKLRGSC
Ga0311326_100396381	3300029917	Bog	MLGSINPEVLQCFAAATTETLGCYQKPIIEPPGLFALLNQFRHKELRRSMALINRFLETLGNQIKLRGSCE
Ga0311326_101558861	3300029917	Bog	KPIIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0311363_102589401	3300029922	Fen	INPDVLQSVAVAVSETLGCYEKPIIEPPSLFSLMVQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311328_100309611	3300029939	Bog	LGCYDKPVIEPPGLFSLLSQFRHKELRRSIALVNRFLERLGNQIKLRGSCK
Ga0311328_100427695	3300029939	Bog	ATTETLGCYQKPIIEPPGLFSLLSQFRHKELRRSMALINRFLETLGNQIKLRGSCK
Ga0311328_104954701	3300029939	Bog	GVAAAVGETLGCYEKPIIEPPGLFALMAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311352_114940421	3300029944	Palsa	DLLERIAVATSQTLGSYEKPVIEPPGLFSLLSQFRHPELRRSIALINRFLEALGIQLSARGDAANKP
Ga0311330_102968312	3300029945	Bog	NPDVLQSIAVAASETLGCYEKPIIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0311330_106657992	3300029945	Bog	ETLGCYEKPIIEPPGLFSLMFQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311343_100665971	3300029953	Bog	NPEVLQCVATAAGETLGCYQKPVIEPPGLFALLSQFRHQELRRSIALVNRFLETLGNQIKLRGSCK
Ga0311343_103752831	3300029953	Bog	AAAATETLGCYQQPIIEPPGLFSLLNQFRHKELRRSMALINRFLEALGNQIKLRGSCK
Ga0311331_104306512	3300029954	Bog	ETLGCYEKPIIEPPGLFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311331_111221682	3300029954	Bog	SETLGCYEKPIIEPPSLFSLMVQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311342_101735151	3300029955	Bog	AAGETLGCYQKPVIEPPGLFALLSQFRHQELRRSIALVNRFLETLGNQIKLRGSCK
Ga0302280_10823151	3300029985	Fen	SINPDVLQCFAVATTETLGCYQKPIIEPPGLFALLSQFRHKELRRSMALINRFLETLGNQIKLRGSCE
Ga0302280_11754571	3300029985	Fen	VAVGETLGCYEKPIIEPPALFSLLFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0302188_101403941	3300029986	Bog	IIEPPGLFSLMFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302190_100957192	3300029988	Bog	LQCFAAAATETLGCYQQPIIEPPGLFSLLNQFRHKELRRSMALINRFLEALGNQIKLRGSCK
Ga0302276_100722731	3300029992	Bog	ETLGCYQKPVIEPPGLFALLSQFRHQELRRSIALVNRFLETLGNQIKLRGSCK
Ga0311338_118093371	3300030007	Palsa	TAASETLGCYEKPVIEPPGLFSLLNQFRHKELRRSIALVNRFLEKLGNQIKLRGGCE
Ga0302270_101443021	3300030011	Bog	LQCFAVATTETLGCYQKPIIEPPGLFALLGQFRHKELRRSMALINRFLEALGNQIKLRGSCD
Ga0302270_101677082	3300030011	Bog	KPIIEPPALFSLLFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0302274_101778362	3300030041	Bog	ETLGCYQKPIIEPPGLFSLLSQFRHKELRRSMALINRFLETLGNQIKLRGSCGNS
Ga0302274_103525681	3300030041	Bog	EKPIIEPPGLFSLLFQFSHKELRRSLALLNKFLESLGNQIKLRGGCK
Ga0302300_12135851	3300030042	Palsa	TLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302281_103825191	3300030044	Fen	YEQPIIEPPGLFSLLFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302191_102698432	3300030049	Bog	INPDVLQSVAVAVSETLGCYEKPIIEPPGLFALMVQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302177_105554762	3300030053	Palsa	INPEVLQCVTNAAGETLGCYEKPVIEPPGLLSLLGQFRHQELRRSVAFINRFLEALGNQLTLRGNCK
Ga0311370_107927282	3300030503	Palsa	KPIVEPPGLISLLSQFRHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0311370_119224682	3300030503	Palsa	QPIIEPPGLVSLMFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0302194_104155731	3300030506	Bog	QSVAVAVSETLGCYEKPVIEPPGLLSLMLQFSHKELRRSMALLNKFLESLGNQIKLRGNC
Ga0302185_100626452	3300030508	Bog	YQKPIIEPPGLFALLGQFRHKELRRSMALINRFLEALGNQIKLRGSCD
Ga0311372_109451091	3300030520	Palsa	LQCVAVAVGETLGCYEKPIIEPPGLIPLLSQFRHKELRRSMALLNKFLEALGNQIKLRGSCK
Ga0311357_107287621	3300030524	Palsa	ERIAVAAGQTLGSFEKPVIEPPGLFSLLSQFRHPELRRSIALINRFLETLGIQLSARGDSATRQ
Ga0311357_117823421	3300030524	Palsa	ALAAGETLGCYEKPVIEPPGLLSLLSQFRHKELRRSIALINRFLEKLGTQIKLRGSCK
Ga0311355_111046882	3300030580	Palsa	TMGCYDKPIIEPPGLLSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311356_117878781	3300030617	Palsa	VLQSVAVAVEDTLGCYGKPVIEPPGLFSLLIQFSHKELRRSMALLNKFLESLGNQIKVRGGCK
Ga0311356_120400192	3300030617	Palsa	AINPEVLQCVALAAGETLGCYEKPVIEPPGLLSLLSQFRHKELRRSIALINRFLEKLGTQIKLRGSCK
Ga0302309_103585612	3300030687	Palsa	AVGETLGCYEQPIIEPPGLVSLMFQFTHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0311345_106216472	3300030688	Bog	QPIIEPPGLFSLMFQFTHKELRSSMALLNKFLESLGNQIKLRGGCK
Ga0075405_114710341	3300030847	Soil	YEKPIIEPPGLFSLIAQFGHKELRRSMALLNKFLESLGNQINLRGSCK
Ga0265770_10937002	3300030878	Soil	DVLQGVAVAVGDTLGCYEKPIIEPPGLLSLLSQFRHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0265760_103389291	3300031090	Soil	GVAVAIGDTLGCYEKPIIEPPGLVSLLSQFRHKELRRSMALLNKFLESLGNQIKLRGSCE
Ga0302307_102972432	3300031233	Palsa	AVAVSETLGCYEKPIVEPPGLISLLSQFRHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0302325_111831221	3300031234	Palsa	NPDVLQSVAVAVSETLGCYEKPIIEPPGLFALMIQFSHKELRRSMALLNKCLESLGNQIKLRGGCK
Ga0302325_114134051	3300031234	Palsa	RVAVAVGQTLGSYEKPVIEPPGLFSLLSQFRHPELRRSIALINRFLETLGIQLSARGDSATRH
Ga0265325_100140241	3300031241	Rhizosphere	SETLGCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLEKLGDQIKIRGGCQ
Ga0302318_100845531	3300031258	Bog	ATTETLGCYQKPVIEPPGLFSLLNQFRHKELRRSMALLNRFLDTLGNQIKLRGSCK
Ga0302140_109435821	3300031261	Bog	SVAVAVGETLGCYEQPIIEPPGLLSLMFQFTHKELRRSMALLNKFLESLGNQIKLSGGCK
Ga0302326_116165312	3300031525	Palsa	EDTLGCYGKPVIEPPGLFSLLIQFSHKELRRSMALLNKFLESLGNQIKVRGGCK
Ga0310686_1139008692	3300031708	Soil	QCVAVAAGETLGCYQKPIVEPPGLFSLLSQFRHKELRRSIALINRFLESLGNQIKLRGSC
Ga0307476_103847691	3300031715	Hardwood Forest Soil	LGCYDKPIIEPPGLLALMAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK
Ga0302319_101026741	3300031788	Bog	ASETLGCYEKPVIEPPGLFSLLSQFRHKELRRSIALINRFLETLGSQIKLRGGCQ
Ga0302319_107795051	3300031788	Bog	SYKKPVIEPPGLFSLLSQFRHPELRRSIALINRFLETLGIQLGTRGDSAIKH
Ga0348332_133090202	3300032515	Plant Litter	AVGETLGCYEKPIIEPPGIFSLMFQFIHKELRRSMALLNKFLESLGNQIKLRGGCK
Ga0335083_101211401	3300032954	Soil	SERKPIIEPPGLLSLLGQFRRKELRRSVALINRFLESLGNQIKLQGAPDHR
Ga0326728_106198902	3300033402	Peat Soil	GATLGSRDRPVIEPPGLLALLGQFRHPELRRSVALINRFLEVLGTQLKLRGKAGTQG
Ga0334827_091733_2_169	3300034065	Soil	ASETLGCYEKPIIEPPGLFSLLAQFSHKELRRSMALLNKFLESLGNQIKLRGSCK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences