Metagenome / Metatranscriptome Family F047222

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F047222
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	53 residues
Representative Sequence	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGR
Number of Associated Samples	133
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.74 %
% of genes near scaffold ends (potentially truncated)	99.33 %
% of genes from short scaffolds (< 2000 bps)	91.33 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.12% β-sheet: 0.00% Coil/Unstructured: 54.88%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF04264	YceI	27.33
PF01243	Putative_PNPOx	20.67
PF02803	Thiolase_C	4.67
PF00390	malic	3.33
PF10604	Polyketide_cyc2	2.67
PF12802	MarR_2	2.00
PF13193	AMP-binding_C	2.00
PF00254	FKBP_C	1.33
PF12680	SnoaL_2	1.33
PF04055	Radical_SAM	1.33
PF08281	Sigma70_r4_2	1.33
PF11066	DUF2867	0.67
PF00496	SBP_bac_5	0.67
PF02837	Glyco_hydro_2_N	0.67
PF04542	Sigma70_r2	0.67
PF02720	DUF222	0.67
PF00392	GntR	0.67
PF08327	AHSA1	0.67
PF06351	Allene_ox_cyc	0.67
PF03949	Malic_M	0.67
PF11298	DUF3099	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	27.33
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	4.67
COG0281	Malic enzyme	Energy production and conversion [C]	4.00
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.67
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.67
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.67 %
Unclassified	root	N/A	29.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.67 %
Unclassified	root	N/A	29.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.67 %
Unclassified	root	N/A	29.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.00 %
Unclassified	root	N/A	29.33 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.00 %
Unclassified	root	N/A	29.33 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.33 %
Unclassified	root	N/A	29.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.33 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	6.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.33 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.67 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	2.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.67 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.33 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.67 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.33 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.67 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2.00 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.67 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.33 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	6.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.33 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.00 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2.00 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.67 %
unclassified Streptomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae	0.67 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.33 %
Actinokineospora baliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	6.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.33 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2.00 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Streptomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	0.67 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.67 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.67 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.33 %
Actinokineospora baliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	6.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.33 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2.00 %
Kribbella sp. VKM Ac-2573	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2573	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Streptomyces sp. CNS606	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNS606	0.67 %
Streptomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	0.67 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.67 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.67 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10136635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1086	Open in IMG/M
3300003505\|JGIcombinedJ51221_10264745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	699	Open in IMG/M
3300004152\|Ga0062386_101780152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300005330\|Ga0070690_100181548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1454	Open in IMG/M
3300005332\|Ga0066388_107573071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005435\|Ga0070714_100175633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1946	Open in IMG/M
3300005439\|Ga0070711_101518367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNS606	585	Open in IMG/M
3300005467\|Ga0070706_101294708	Not Available	668	Open in IMG/M
3300005471\|Ga0070698_101240425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300005536\|Ga0070697_101296675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300005591\|Ga0070761_10227579	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300005598\|Ga0066706_10792999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300005602\|Ga0070762_11004620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300005764\|Ga0066903_104920571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2573	709	Open in IMG/M
3300005983\|Ga0081540_1016909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4541	Open in IMG/M
3300005995\|Ga0066790_10195221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	866	Open in IMG/M
3300006028\|Ga0070717_10605623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	994	Open in IMG/M
3300006086\|Ga0075019_10540771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300006175\|Ga0070712_100846611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300006176\|Ga0070765_100493911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300006755\|Ga0079222_11191455	Not Available	681	Open in IMG/M
3300006806\|Ga0079220_11809944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300006871\|Ga0075434_101666389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300007258\|Ga0099793_10434185	Not Available	648	Open in IMG/M
3300009038\|Ga0099829_10320021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1274	Open in IMG/M
3300009038\|Ga0099829_11732427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	513	Open in IMG/M
3300009089\|Ga0099828_10917438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	782	Open in IMG/M
3300009524\|Ga0116225_1420275	Not Available	594	Open in IMG/M
3300009672\|Ga0116215_1209434	Not Available	857	Open in IMG/M
3300009698\|Ga0116216_10100460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1781	Open in IMG/M
3300009700\|Ga0116217_10240911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	1176	Open in IMG/M
3300009824\|Ga0116219_10132991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300010043\|Ga0126380_10950963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	719	Open in IMG/M
3300010048\|Ga0126373_11973232	Not Available	646	Open in IMG/M
3300010361\|Ga0126378_12516441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	588	Open in IMG/M
3300010366\|Ga0126379_11273525	Not Available	841	Open in IMG/M
3300010373\|Ga0134128_11139592	Not Available	861	Open in IMG/M
3300010379\|Ga0136449_103688023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	579	Open in IMG/M
3300010876\|Ga0126361_10654123	Not Available	936	Open in IMG/M
3300010880\|Ga0126350_10380934	Not Available	544	Open in IMG/M
3300010880\|Ga0126350_10875132	Not Available	754	Open in IMG/M
3300010880\|Ga0126350_11679917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1226	Open in IMG/M
3300012201\|Ga0137365_10750607	Not Available	713	Open in IMG/M
3300012202\|Ga0137363_11489317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	568	Open in IMG/M
3300012207\|Ga0137381_10136261	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300012356\|Ga0137371_11079197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012971\|Ga0126369_11073363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2573	894	Open in IMG/M
3300012989\|Ga0164305_10514144	Not Available	945	Open in IMG/M
3300016445\|Ga0182038_10687239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300017926\|Ga0187807_1032291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1621	Open in IMG/M
3300017926\|Ga0187807_1076828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042	Open in IMG/M
3300017928\|Ga0187806_1111439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300017932\|Ga0187814_10004406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	5653	Open in IMG/M
3300017937\|Ga0187809_10079290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300017942\|Ga0187808_10102685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300017974\|Ga0187777_10993161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	607	Open in IMG/M
3300017974\|Ga0187777_11448264	Not Available	508	Open in IMG/M
3300018007\|Ga0187805_10094565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1350	Open in IMG/M
3300018007\|Ga0187805_10184472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300018085\|Ga0187772_11400040	Not Available	519	Open in IMG/M
3300018482\|Ga0066669_10721385	Not Available	879	Open in IMG/M
3300020002\|Ga0193730_1137145	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300020081\|Ga0206354_11044162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1523	Open in IMG/M
3300020582\|Ga0210395_10031248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3904	Open in IMG/M
3300020583\|Ga0210401_10949762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300021403\|Ga0210397_11596429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300021404\|Ga0210389_11089090	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300021478\|Ga0210402_10176417	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300021479\|Ga0210410_11396046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300024286\|Ga0247687_1033745	Not Available	749	Open in IMG/M
3300024325\|Ga0247678_1092543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	512	Open in IMG/M
3300025898\|Ga0207692_10403732	Not Available	853	Open in IMG/M
3300025921\|Ga0207652_10689125	Not Available	912	Open in IMG/M
3300026295\|Ga0209234_1270847	Not Available	548	Open in IMG/M
3300026304\|Ga0209240_1155243	Not Available	710	Open in IMG/M
3300026475\|Ga0257147_1023035	Not Available	877	Open in IMG/M
3300027030\|Ga0208240_1040301	All Organisms → cellular organisms → Bacteria → Terrabacteria group	526	Open in IMG/M
3300027765\|Ga0209073_10109230	Not Available	985	Open in IMG/M
3300027775\|Ga0209177_10212569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	695	Open in IMG/M
3300027787\|Ga0209074_10519630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	520	Open in IMG/M
3300027825\|Ga0209039_10304346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	627	Open in IMG/M
3300027829\|Ga0209773_10096734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300027829\|Ga0209773_10487610	Not Available	507	Open in IMG/M
3300027869\|Ga0209579_10788997	Not Available	513	Open in IMG/M
3300028715\|Ga0307313_10063998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300028768\|Ga0307280_10168085	Not Available	764	Open in IMG/M
3300028781\|Ga0302223_10183831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300028791\|Ga0307290_10343593	Not Available	546	Open in IMG/M
3300028806\|Ga0302221_10308139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300028808\|Ga0302228_10336131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300030007\|Ga0311338_10032409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7287	Open in IMG/M
3300030503\|Ga0311370_10847500	Not Available	1044	Open in IMG/M
3300030524\|Ga0311357_11103506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300030618\|Ga0311354_10139830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2655	Open in IMG/M
3300031543\|Ga0318516_10154197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300031546\|Ga0318538_10111737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1421	Open in IMG/M
3300031564\|Ga0318573_10090761	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300031564\|Ga0318573_10248198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	948	Open in IMG/M
3300031564\|Ga0318573_10655741	Not Available	564	Open in IMG/M
3300031564\|Ga0318573_10678362	Not Available	554	Open in IMG/M
3300031682\|Ga0318560_10578030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300031713\|Ga0318496_10170711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300031713\|Ga0318496_10233753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1012	Open in IMG/M
3300031715\|Ga0307476_10438315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300031720\|Ga0307469_11869539	Not Available	581	Open in IMG/M
3300031723\|Ga0318493_10326507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300031747\|Ga0318502_10044207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2321	Open in IMG/M
3300031751\|Ga0318494_10646084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	619	Open in IMG/M
3300031753\|Ga0307477_11158789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300031770\|Ga0318521_10041512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2328	Open in IMG/M
3300031770\|Ga0318521_10855733	Not Available	555	Open in IMG/M
3300031771\|Ga0318546_10689545	Not Available	719	Open in IMG/M
3300031778\|Ga0318498_10432582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	583	Open in IMG/M
3300031781\|Ga0318547_10139599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418	Open in IMG/M
3300031781\|Ga0318547_10225777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300031782\|Ga0318552_10607285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	558	Open in IMG/M
3300031799\|Ga0318565_10262246	Not Available	840	Open in IMG/M
3300031805\|Ga0318497_10324027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300031821\|Ga0318567_10058792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300031821\|Ga0318567_10316069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300031831\|Ga0318564_10052321	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300031833\|Ga0310917_10491270	Not Available	835	Open in IMG/M
3300031846\|Ga0318512_10283307	Not Available	822	Open in IMG/M
3300031880\|Ga0318544_10419029	Not Available	521	Open in IMG/M
3300031890\|Ga0306925_10927977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300031894\|Ga0318522_10419756	Not Available	507	Open in IMG/M
3300031896\|Ga0318551_10546005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300031912\|Ga0306921_11063968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	909	Open in IMG/M
3300031938\|Ga0308175_101824564	Not Available	681	Open in IMG/M
3300031946\|Ga0310910_11574165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031981\|Ga0318531_10226733	Not Available	843	Open in IMG/M
3300032008\|Ga0318562_10647540	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300032010\|Ga0318569_10110751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1246	Open in IMG/M
3300032025\|Ga0318507_10348137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	645	Open in IMG/M
3300032025\|Ga0318507_10383993	Not Available	612	Open in IMG/M
3300032035\|Ga0310911_10572123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora baliensis	655	Open in IMG/M
3300032064\|Ga0318510_10342389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300032065\|Ga0318513_10154550	Not Available	1096	Open in IMG/M
3300032065\|Ga0318513_10266650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300032066\|Ga0318514_10160905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1167	Open in IMG/M
3300032067\|Ga0318524_10027323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2608	Open in IMG/M
3300032076\|Ga0306924_10667456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1170	Open in IMG/M
3300032076\|Ga0306924_12314954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300032089\|Ga0318525_10534315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300032261\|Ga0306920_102246252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300032783\|Ga0335079_11046997	Not Available	829	Open in IMG/M
3300032892\|Ga0335081_10162793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3164	Open in IMG/M
3300032897\|Ga0335071_10132663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2441	Open in IMG/M
3300033134\|Ga0335073_12099737	All Organisms → cellular organisms → Bacteria → Terrabacteria group	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.67%
Host-Associated	Host-Associated	1.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.00%
Aquatic	Environmental → Aquatic	8.67%
Plants	Host-Associated → Plants	1.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.67%
Freshwater	Environmental → Aquatic → Freshwater	8.00%
Peat	Environmental → Terrestrial → Peat	5.33%
Sediment	Environmental → Aquatic → Sediment	0.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.00%
Loam	Environmental → Terrestrial → Soil → Loam	11.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.33%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101366351	3300001356	Peatlands Soil	VTSTPIASLLRRWATAVAVGRVALGVTALAWPSVPARPWVGAAADDVAARV
JGIcombinedJ51221_102647451	3300003505	Forest Soil	LTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGPAADGVAARVFGR
Ga0062386_1017801522	3300004152	Bog Forest Soil	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGRAL
Ga0070690_1001815481	3300005330	Switchgrass Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRAL
Ga0066388_1075730711	3300005332	Tropical Forest Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADDLAARVFGRALG
Ga0070714_1001756334	3300005435	Agricultural Soil	VPDQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAA
Ga0070711_1015183671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKARVTLADVPGLLRRGAVAVAAGRVALGVTALAWPSVPARPWVGASAGDVTA
Ga0070706_1012947081	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASA
Ga0070698_1012404251	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTSANIPSLLRRGATVVAAGRVALGVTALAWPAVPARPWVGAAADDVAARVFGRALGA
Ga0070697_1012966751	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VPEQLTATSIPALLRRGAVIVAAGRVALGLTALAWPAVPARPWVGASADD
Ga0070761_102275793	3300005591	Soil	MTALARYGATAVAAGRVAIGVTALAWPSVPSRPWVGAASDDLA
Ga0066706_107929991	3300005598	Soil	VAEQLTPTSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARV
Ga0070762_110046202	3300005602	Soil	VTTEVPVLLRHGARAVAAGRVALGLTALAWPRVVARPWVGPAGNVTGRVLGRALGGR
Ga0066903_1049205712	3300005764	Tropical Forest Soil	VTTTALPALLRRGAGAVAAGRVALGLAALARPSLLARPWVGAAADDLA
Ga0081540_10169096	3300005983	Tabebuia Heterophylla Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRGALGLTALAWPAGTARPRGGGSAHAPAAPGVRPA
Ga0066790_101952211	3300005995	Soil	MTFPALLRHGARAVAAGRVALGLTALAWPSGPARPWVGAAADDLA
Ga0070717_106056232	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAPVPVLLRRGSWAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGRAL
Ga0075019_105407711	3300006086	Watersheds	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGRALGARDVA
Ga0070712_1008466111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARD
Ga0070765_1004939113	3300006176	Soil	VTSTDIPSLLRRGATAVAAGRVALGVTALAWPSIPARPWVGAAADDVAARVFGRAL
Ga0079222_111914552	3300006755	Agricultural Soil	VAEQLTSTSIATLMRRGALTVAAGRVALGLTALAWPAVPARPWVGASAD
Ga0079220_118099441	3300006806	Agricultural Soil	MPGTRARVTLADVPGLLRRGAVAVAAGRVALGVTALAWPSVPARPWVGASAGDVTAR
Ga0075434_1016663891	3300006871	Populus Rhizosphere	MAEQLTPTSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVF
Ga0099793_104341851	3300007258	Vadose Zone Soil	VAPLLRRGAMAVAAGRVALGLAALAWPTVPARPWVGTTADDLAV
Ga0099829_103200211	3300009038	Vadose Zone Soil	VAPLLRRGAMAVAAGRVALGLAALAWPTVPARPWVGTTADDLAVRVFGRALGARDL
Ga0099829_117324271	3300009038	Vadose Zone Soil	VSVADLPALLRRGAVAVAAGRLALGLTALAWPSVPARPWVGAAADDVAAR
Ga0099828_109174381	3300009089	Vadose Zone Soil	VAPLLRRGAMAVAAGRVALGLAALAWPTVPACPWVGTTADDLAVRVFGRALGARDLALGL
Ga0116225_14202751	3300009524	Peatlands Soil	VTPTPAAALLRRGAQAVAAGRVALGLTALARPSLPARPWVGASADDLAAQVFGRA
Ga0116215_12094341	3300009672	Peatlands Soil	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLA
Ga0116216_101004601	3300009698	Peatlands Soil	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGR
Ga0116217_102409112	3300009700	Peatlands Soil	VTPTPAAALLRRGAQAVAAGRVALGLTALARPSLPARPWVGASADDLAAQVFGRALG
Ga0116219_101329911	3300009824	Peatlands Soil	VILILEGRVQAMTSTPVSLLLRRGATAVAAGRVALGVTALAWPSVPARP
Ga0126380_109509632	3300010043	Tropical Forest Soil	VADQLTPNSIPALLRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADDLAARVFGRALGARDVA
Ga0126373_119732321	3300010048	Tropical Forest Soil	VVAAAPLLRRGAMAVAAGRVALGLTALGWPAVPARPWVGAVA
Ga0126378_125164412	3300010361	Tropical Forest Soil	VADELTPTSIPALLQRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAA
Ga0126379_112735251	3300010366	Tropical Forest Soil	VVAAAPLLRRGAMAVAAGRVALGLTALAWPVVPARPWVGAAADDLAVRVF
Ga0134128_111395921	3300010373	Terrestrial Soil	MPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRAL
Ga0136449_1036880231	3300010379	Peatlands Soil	VDLIDTDLPSLARRCAAAVAAGRVAIGLAALARPSIPSRPWVGAAADDLA
Ga0126361_106541233	3300010876	Boreal Forest Soil	MTFPALLRHGAMAVAAGRVALGLTALAWPAGPARPWVGAAADD
Ga0126350_103809341	3300010880	Boreal Forest Soil	VTSIPIPALLRTGATAVAAGRVALGLTALAWPSGPARPWVGAAADDLAARVFGRALGARDLAL
Ga0126350_108751321	3300010880	Boreal Forest Soil	VTSIPIPVLLRHGAKAVAAGRVALGLTALAWPSGPARPWVGEGADDLAARVF
Ga0126350_116799171	3300010880	Boreal Forest Soil	VQVTSTDIASLLRRGATAVAAGRVALGVTALVWPAVPARPWVGAAADD
Ga0137365_107506071	3300012201	Vadose Zone Soil	MAEQLTPTSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAAR
Ga0137363_114893172	3300012202	Vadose Zone Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGTSADA
Ga0137381_101362611	3300012207	Vadose Zone Soil	VPEQLTTTSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADELAARVFGRALGARDLAL
Ga0137371_110791971	3300012356	Vadose Zone Soil	VTPTAIPALLRRGAWAVAAGRVALGLTALAWPSVPARAWVGAAADDLAARV
Ga0126369_110733631	3300012971	Tropical Forest Soil	VTPGDIPALLRRGAGAVAAGRVALGLAALARPSLPARPWVGAAADDLAAEVF
Ga0164305_105141442	3300012989	Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAA
Ga0182038_106872391	3300016445	Soil	VTSTRTIPSLLRQGATAVAAGRVALGVTALAWPSVPARPWVGADADGV
Ga0187807_10322911	3300017926	Freshwater Sediment	MEGKAQVTSTPIVPLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAA
Ga0187807_10768282	3300017926	Freshwater Sediment	MEGKAQVTSTPIVPLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVF
Ga0187806_11114391	3300017928	Freshwater Sediment	VDSSQLDIAALARHGATAVAAGRVAIGVTALAWPSVPSRPWVGAASDDLA
Ga0187814_100044067	3300017932	Freshwater Sediment	VDSSEIDVATLARYGATAVAAGRVAIGLTALALPSVPSRPWVGAAADDLAAQVFGRAL
Ga0187809_100792903	3300017937	Freshwater Sediment	VTSTDVPSLLRRGAMAVAAGRVAIGVTALAWPSVPARPWVGAAA
Ga0187808_101026853	3300017942	Freshwater Sediment	MTSAAIPALLRRGATLVAAGRVALGVTALAWPAVPARPWVGAAADDLA
Ga0187777_109931612	3300017974	Tropical Peatland	VEGNDRILEGSVQVTSNTIPSLLRHGATAVAAGRVALGVAALVWPSLPARPWVGEAADGVAARVFGRAL
Ga0187777_114482641	3300017974	Tropical Peatland	VTSMTIPLLLRRGATAVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRA
Ga0187805_100945651	3300018007	Freshwater Sediment	VTSTPIAPLLRRGATAVAVGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRALG
Ga0187805_101844721	3300018007	Freshwater Sediment	MEGKAQVTSTPIVPLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAA
Ga0187772_114000402	3300018085	Tropical Peatland	VTSADIPVLLRRGAAFLAVGRVAVGVTALAWPSVLARPWVGAA
Ga0066669_107213852	3300018482	Grasslands Soil	MPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVF
Ga0193730_11371451	3300020002	Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGA
Ga0206354_110441624	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASAD
Ga0210395_100312486	3300020582	Soil	LTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGPAADGV
Ga0210401_109497621	3300020583	Soil	VTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGAAADDVAARVFGRAL
Ga0210397_115964292	3300021403	Soil	LTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGPAADGVAARVFGRALG
Ga0210389_110890901	3300021404	Soil	VTPGPIPALLGRGARAVAVARVAIGLTALARPSVPARPWVGAAADDL
Ga0210402_101764171	3300021478	Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRA
Ga0210410_113960461	3300021479	Soil	LTSTDIRSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGPAADGVA
Ga0247687_10337451	3300024286	Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGG
Ga0247678_10925432	3300024325	Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDL
Ga0207692_104037322	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAEQLTPTSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARD
Ga0207652_106891252	3300025921	Corn Rhizosphere	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARDLAL
Ga0209234_12708471	3300026295	Grasslands Soil	VAEQLTANSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARDT
Ga0209240_11552431	3300026304	Grasslands Soil	VAVLLRRGAGAVAAGRVALGLTALAWPSLPARPWVGAAADDLAARVLG
Ga0257147_10230352	3300026475	Soil	VPEQLTANSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGAR
Ga0208240_10403011	3300027030	Forest Soil	MRTDVSVWLRRGTRAVAAGRVALGVTALAWPGVPARPWVGDNASEGVA
Ga0209073_101092301	3300027765	Agricultural Soil	VPEQLTATSIPALLRRGAVIVAAGRVALGLTALAWPAVPARPWVGDSADDLAARVFGRALGARDLS
Ga0209177_102125691	3300027775	Agricultural Soil	MPGTKARVTLTDVPGLLRRGAVAVAAGRVALGVTALAWPSVPARPWVGASAGDLTARVFGRALGAR
Ga0209074_105196301	3300027787	Agricultural Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGR
Ga0209039_103043462	3300027825	Bog Forest Soil	MTSTDIPALLRRGAVAVAAGRVALGLTALAWPSVPARPWVGAAADDLAARVFGRALGARD
Ga0209773_100967344	3300027829	Bog Forest Soil	VTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGAAADG
Ga0209773_104876101	3300027829	Bog Forest Soil	VTSTSIAPLLRRGATAVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRALGAR
Ga0209579_107889971	3300027869	Surface Soil	MTTPAGIVSLLRPAATAVAAGRVALGLTALAWPTVPARPWVGAPRDDL
Ga0307313_100639981	3300028715	Soil	VPEQLTAKSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLA
Ga0307280_101680852	3300028768	Soil	VPEQLTAKSIPALLRLGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARDLA
Ga0302223_101838312	3300028781	Palsa	VTSTPIPSLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVL
Ga0307290_103435931	3300028791	Soil	VSSTAVAALLRRGARAVAAGRVALGLTALAWPSVPARPWVGVAAD
Ga0302221_103081392	3300028806	Palsa	VTSTPIPSLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVLGRA
Ga0302228_103361311	3300028808	Palsa	VTSTPIPSLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRALGARD
Ga0311338_1003240910	3300030007	Palsa	VTSTPIPSLLRRGATVVAAGRVALGVTALAWPSVPARPWVGAAADDVAARV
Ga0302178_104259421	3300030013	Palsa	VEEPEGRAQVKSKSIRIPGLLRHGARAVAAGRVALGLTALVWPSVPARPWVGE
Ga0311370_108475001	3300030503	Palsa	MGIPELLRRGAGAVAAGRVALGLTALVWPSVPARPWVGGAADELAARVFGRALGARDLA
Ga0311357_111035061	3300030524	Palsa	VTSTPIPSLLRRGATFVAAGRVALGVTALAWPSVPARPWVGAAADDVAARV
Ga0311354_101398305	3300030618	Palsa	VTSIAIPKLLRHGATTVAAGRVALGLTALAWPSVPARPWVGGAADDLAARVF
Ga0318516_101541971	3300031543	Soil	VTSTTTIPSLLRQGATTVAAGRVALGVTALVWPSVPARPWVGPAADGVAARVFGR
Ga0318538_101117373	3300031546	Soil	VQVTSTDVPSLLRRGAVAVAVGRVAIGVTALAWPSVPARPWVGAAADDVAARVFGR
Ga0318573_100907613	3300031564	Soil	MGEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADDL
Ga0318573_102481982	3300031564	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGATADDLTARVFGRALGARD
Ga0318573_106557411	3300031564	Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGARD
Ga0318573_106783621	3300031564	Soil	VPESLNLRPIPALLRRGAVTVAAGRVALGLAALAWPAVPARPWVGASADDLAA
Ga0318560_105780302	3300031682	Soil	VQVTSTDVPSLLRRGAMAVAAGRVAIGVTALVWPLVPARPWVGAAADDVA
Ga0318496_101707113	3300031713	Soil	MQVTSTDVPSLLRRGAVTVAAGRVALGVTALIWPSVPARPWVGAAADGVAVQV
Ga0318496_102337531	3300031713	Soil	VQVTSTDVPSLLRRGAVTVATGRVALGVTALIWPSVPARPWVGAAADGVAAR
Ga0307476_104383153	3300031715	Hardwood Forest Soil	LTSTDIPSLLRRGATAVAAGRVALGVTALAWPAVPARPWVGPAADGVAARVFGRALGAR
Ga0307469_118695391	3300031720	Hardwood Forest Soil	VPEQLTATSIPALLRRGAVTVAAGRVALGLTALAWPAVPARPWVGASADDLAAQVFGRA
Ga0318493_103265071	3300031723	Soil	VQVTSTDVPSLLRRGAMAVAAGRVAIGVTALVWPLVPARPWVGAAADDVAARVFGRALGA
Ga0318502_100442071	3300031747	Soil	VPEQLTSTSIQALLQRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRA
Ga0318494_106460843	3300031751	Soil	VQVTSTDVPSLLRRGAVTVATGRVALGVTALIWPSVPARPWVGAAADGVAARVFGRALGARD
Ga0307477_111587892	3300031753	Hardwood Forest Soil	VTSTDIPSLLRRGATAVAAGRVALGVTALAWPTVPARPWVGAAAD
Ga0318521_100415121	3300031770	Soil	VPEQLTSTSIQALLQRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFG
Ga0318521_108557331	3300031770	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGAAADDLTARVFGRALG
Ga0318546_106895451	3300031771	Soil	VTTTSLPALLRRGAGALAAGRVALGLATLAWPSVTARPWVGAAA
Ga0318498_104325821	3300031778	Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALG
Ga0318547_101395993	3300031781	Soil	VTSTDVPSLLRRGALAVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRAL
Ga0318547_102257771	3300031781	Soil	MGEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADDLTARVFG
Ga0318552_106072851	3300031782	Soil	VTSTDIPLLLRRGAMAVAAGRVALGVTALVWPSVPARPWVGAAADDVAAR
Ga0318565_102622462	3300031799	Soil	VPKQLTATSFPVLLRRGAVTVAAGRVALGLTALAWPAVPARPWVGATADDLTAQVFG
Ga0318497_103240272	3300031805	Soil	VTSTDVPSLLRRGALAVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFG
Ga0318567_100587924	3300031821	Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGAR
Ga0318567_103160691	3300031821	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGATADDLTARVFGRAL
Ga0318564_100523211	3300031831	Soil	MGEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADD
Ga0310917_104912702	3300031833	Soil	MGEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGAA
Ga0318512_102833072	3300031846	Soil	VTTTSLPALLRRGAGALAAGRVALGLATLAWPSVTARPWVGAAADDLAAQVFGRALGARD
Ga0318544_104190292	3300031880	Soil	MLRRGAWAVAAGRVALGLTALAWPSIPARPWVGATADEVSVQVFGRALG
Ga0306925_109279771	3300031890	Soil	VTSTPIVPLLRRGATAVAIGRVALGVTALAWPWVPARPWVGAAADDVAAQVFGR
Ga0318522_104197561	3300031894	Soil	MLRRGAWAVAAGRVALGLTALAWPSIPARPWVGATADEVSVRVFG
Ga0318551_105460052	3300031896	Soil	VTSTDVPSLLRRGALAVAAGRVALGVTALAWPSVPARPWVGAAADDVAARVFGRALGARDLT
Ga0306921_110639682	3300031912	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGAAADDLTA
Ga0308175_1018245641	3300031938	Soil	MTARVTLADVPGLLRRGAVAVAAGRVALGVTALAWPSVPARPWVGASAGDVTARV
Ga0310910_115741652	3300031946	Soil	VTSTDVPSLLRRGALAVAAGRVALGVTALAWPSVPARPWVGAAAD
Ga0318531_102267332	3300031981	Soil	VPEQLTSTSIQALLQRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGA
Ga0318562_106475402	3300032008	Soil	VAPNAIPALLRRGAGAVAAGRVALGLAALAWPSVPARPWVGAAADDL
Ga0318569_101107511	3300032010	Soil	MRRGALIVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALG
Ga0318507_103481372	3300032025	Soil	VTSTPIVPLLRRGATAVAIGRVALGVTALAWPWVPARPWVGAAAD
Ga0318507_103839932	3300032025	Soil	MGEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGASA
Ga0310911_105721232	3300032035	Soil	VAEQLTPISIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGASADDLAARVFGRALGAR
Ga0318510_103423891	3300032064	Soil	VTSTDVPSLLRRGALAVAAGRVALGVTALAWPSVPARPWVGAAADDLAA
Ga0318513_101545501	3300032065	Soil	VTSTAIPVQLRRGALAVAAGRVALGLTALAWPLVPARPWVGAAADDLTAQVFGRAL
Ga0318513_102666501	3300032065	Soil	VTSTSIVSLLRRGATAVAVGRVALGVTALAWPSVPARPWVGAAADD
Ga0318514_101609052	3300032066	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGAAADDLTARVFG
Ga0318524_100273231	3300032067	Soil	VRLTAIPVLLRRGATAVAAGRVALGVIALAWPSVPARPWVGATADDLTARV
Ga0306924_106674561	3300032076	Soil	VRLTAIPVLLRRGATAVAAGRRAHRVFAHAWPTVPAPPTVGAAP
Ga0306924_123149542	3300032076	Soil	VQVTSTDVPSLLRRGAVAVAVGRVAIGVTALAWPSVPARPWVGAAADDVAARVFGRALGA
Ga0318525_105343152	3300032089	Soil	VQVTSTDVPSLLRRGAMAVAAGRVAIGVTALVWPSVPARPWVGAAADDLA
Ga0306920_1022462522	3300032261	Soil	VTSTSIVSLLRRGATAVAVGRVALGVTALAWPSVPARPWVGAAADDVAAQV
Ga0335079_110469972	3300032783	Soil	VAEQLTSTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGASA
Ga0335081_101627935	3300032892	Soil	MRRGALTVAAGRVALGLTALAWPAVPARPWVGAAADDLAARVFGRALGARD
Ga0335071_101326634	3300032897	Soil	VAEQLTPTSIPALMRRGALTVAAGRVALGLTALAWPAVPARPWVGAAAD
Ga0335073_120997372	3300033134	Soil	MAKDISVLLRRGAMTVAAGRVALGAVALAWPAVPARPWVGTAADDVAARVFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047222

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences