Metagenome Family F047160

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047160
Family Type	Metagenome
Number of Sequences	150
Average Sequence Length	62 residues
Representative Sequence	VLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Number of Associated Samples	115
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.33 %
% of genes near scaffold ends (potentially truncated)	28.00 %
% of genes from short scaffolds (< 2000 bps)	82.00 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (25.333 % of family members)
Environment Ontology (ENVO)	Unclassified (28.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.56% β-sheet: 0.00% Coil/Unstructured: 64.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF13180	PDZ_2	20.00
PF12704	MacB_PCD	15.33
PF13365	Trypsin_2	10.00
PF01061	ABC2_membrane	8.67
PF11219	DUF3014	2.00
PF00005	ABC_tran	2.00
PF13360	PQQ_2	1.33
PF14534	DUF4440	1.33
PF07586	HXXSHH	0.67
PF02515	CoA_transf_3	0.67
PF12698	ABC2_membrane_3	0.67
PF12867	DinB_2	0.67
PF11383	DUF3187	0.67
PF13557	Phenol_MetA_deg	0.67
PF00753	Lactamase_B	0.67
PF02321	OEP	0.67
PF11209	LmeA	0.67
PF13414	TPR_11	0.67
PF02826	2-Hacid_dh_C	0.67
PF00583	Acetyltransf_1	0.67
PF03703	bPH_2	0.67
PF00149	Metallophos	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.33
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.67
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.67
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.00 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.00 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.67 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.00 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.67 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.67 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.67 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.67 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.00 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.67 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.00 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.67 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8934622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1235	Open in IMG/M
2162886011\|MRS1b_contig_6896225	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c015558	Not Available	652	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105452386	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300000953\|JGI11615J12901_11327029	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300003267\|soilL1_10049153	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300003987\|Ga0055471_10247797	Not Available	564	Open in IMG/M
3300003996\|Ga0055467_10017414	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300004114\|Ga0062593_100169558	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300004114\|Ga0062593_101283585	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300004463\|Ga0063356_100027951	All Organisms → cellular organisms → Bacteria	5393	Open in IMG/M
3300004463\|Ga0063356_100371431	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300004463\|Ga0063356_103740607	Not Available	655	Open in IMG/M
3300004463\|Ga0063356_104819303	Not Available	580	Open in IMG/M
3300004480\|Ga0062592_102540686	Not Available	516	Open in IMG/M
3300004643\|Ga0062591_102699819	Not Available	525	Open in IMG/M
3300005295\|Ga0065707_10468337	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005330\|Ga0070690_100113228	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300005332\|Ga0066388_100872594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1482	Open in IMG/M
3300005334\|Ga0068869_100072902	All Organisms → cellular organisms → Bacteria → Acidobacteria	2545	Open in IMG/M
3300005336\|Ga0070680_100817971	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005336\|Ga0070680_101713497	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300005338\|Ga0068868_100502665	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005343\|Ga0070687_101242941	Not Available	551	Open in IMG/M
3300005353\|Ga0070669_100492070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300005354\|Ga0070675_100168508	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300005355\|Ga0070671_101253439	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300005438\|Ga0070701_11108486	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005440\|Ga0070705_100719364	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005441\|Ga0070700_101350581	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005459\|Ga0068867_100764936	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005466\|Ga0070685_10264393	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005471\|Ga0070698_101193930	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300005518\|Ga0070699_101659222	Not Available	585	Open in IMG/M
3300005536\|Ga0070697_100330642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300005545\|Ga0070695_101544815	Not Available	553	Open in IMG/M
3300005546\|Ga0070696_100503971	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005549\|Ga0070704_101663628	Not Available	589	Open in IMG/M
3300005718\|Ga0068866_10856518	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005843\|Ga0068860_100323140	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300006049\|Ga0075417_10490856	Not Available	616	Open in IMG/M
3300006196\|Ga0075422_10023049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	2128	Open in IMG/M
3300006196\|Ga0075422_10295199	Not Available	693	Open in IMG/M
3300006196\|Ga0075422_10359423	Not Available	636	Open in IMG/M
3300006844\|Ga0075428_100023361	All Organisms → cellular organisms → Bacteria	6840	Open in IMG/M
3300006845\|Ga0075421_100034025	All Organisms → cellular organisms → Bacteria → Proteobacteria	6450	Open in IMG/M
3300006845\|Ga0075421_100221855	All Organisms → cellular organisms → Bacteria → Proteobacteria	2329	Open in IMG/M
3300006845\|Ga0075421_100310480	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300006845\|Ga0075421_100649539	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300006845\|Ga0075421_101290458	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300006845\|Ga0075421_101409244	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300006847\|Ga0075431_101310616	Not Available	685	Open in IMG/M
3300006852\|Ga0075433_10010882	All Organisms → cellular organisms → Bacteria	7316	Open in IMG/M
3300006853\|Ga0075420_100226544	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300006853\|Ga0075420_100475117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300006865\|Ga0073934_10000260	All Organisms → cellular organisms → Bacteria	159899	Open in IMG/M
3300006871\|Ga0075434_100868596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300006871\|Ga0075434_102273348	Not Available	545	Open in IMG/M
3300006880\|Ga0075429_100292101	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300006880\|Ga0075429_100763985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300006880\|Ga0075429_101069331	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300006881\|Ga0068865_102071615	Not Available	517	Open in IMG/M
3300006969\|Ga0075419_11368134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300007004\|Ga0079218_10088096	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300007004\|Ga0079218_10135830	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300007004\|Ga0079218_11302281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300009092\|Ga0105250_10541944	Not Available	533	Open in IMG/M
3300009094\|Ga0111539_10000800	All Organisms → cellular organisms → Bacteria	40974	Open in IMG/M
3300009094\|Ga0111539_10943205	Not Available	1003	Open in IMG/M
3300009100\|Ga0075418_11512974	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300009147\|Ga0114129_10617258	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300009147\|Ga0114129_12809945	Not Available	578	Open in IMG/M
3300009148\|Ga0105243_10115360	All Organisms → cellular organisms → Bacteria → Acidobacteria	2255	Open in IMG/M
3300009156\|Ga0111538_10203350	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300009156\|Ga0111538_10769814	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300009157\|Ga0105092_10338457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300009176\|Ga0105242_11081972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300009177\|Ga0105248_11638865	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300009553\|Ga0105249_12214749	Not Available	622	Open in IMG/M
3300009553\|Ga0105249_12392566	Not Available	601	Open in IMG/M
3300009678\|Ga0105252_10150028	Not Available	971	Open in IMG/M
3300010037\|Ga0126304_10000107	All Organisms → cellular organisms → Bacteria	25585	Open in IMG/M
3300010047\|Ga0126382_10103358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300010047\|Ga0126382_11440526	Not Available	630	Open in IMG/M
3300010362\|Ga0126377_10061793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3300	Open in IMG/M
3300010362\|Ga0126377_11674680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300010362\|Ga0126377_12767690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300010366\|Ga0126379_11993932	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300010399\|Ga0134127_10463006	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300011423\|Ga0137436_1027373	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300011434\|Ga0137464_1064121	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300011436\|Ga0137458_1015341	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300011439\|Ga0137432_1037814	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300012906\|Ga0157295_10194893	Not Available	642	Open in IMG/M
3300012948\|Ga0126375_10427020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300012948\|Ga0126375_11824732	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300013297\|Ga0157378_10817782	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300013308\|Ga0157375_11721208	Not Available	743	Open in IMG/M
3300014326\|Ga0157380_12244638	Not Available	610	Open in IMG/M
3300015371\|Ga0132258_10077572	All Organisms → cellular organisms → Bacteria → Acidobacteria	7734	Open in IMG/M
3300015372\|Ga0132256_101592223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300015374\|Ga0132255_100149400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3255	Open in IMG/M
3300017965\|Ga0190266_10538326	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300018083\|Ga0184628_10108887	Not Available	1428	Open in IMG/M
3300018469\|Ga0190270_11389038	Not Available	748	Open in IMG/M
3300018476\|Ga0190274_10615324	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300025310\|Ga0209172_10000242	All Organisms → cellular organisms → Bacteria	159968	Open in IMG/M
3300025559\|Ga0210087_1093691	Not Available	591	Open in IMG/M
3300025903\|Ga0207680_10852472	Not Available	653	Open in IMG/M
3300025903\|Ga0207680_10951454	Not Available	615	Open in IMG/M
3300025907\|Ga0207645_10065289	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300025927\|Ga0207687_10344737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300025930\|Ga0207701_10721786	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300025935\|Ga0207709_10570816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300025961\|Ga0207712_11944566	Not Available	526	Open in IMG/M
3300026089\|Ga0207648_10471469	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300026116\|Ga0207674_10597634	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300026118\|Ga0207675_101650986	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026121\|Ga0207683_10584447	Not Available	1033	Open in IMG/M
3300027873\|Ga0209814_10030926	All Organisms → cellular organisms → Bacteria → Acidobacteria	2204	Open in IMG/M
3300027880\|Ga0209481_10041142	Not Available	2121	Open in IMG/M
3300027880\|Ga0209481_10427626	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300027886\|Ga0209486_10065569	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300027886\|Ga0209486_10117704	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300027907\|Ga0207428_10002900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	17001	Open in IMG/M
3300027907\|Ga0207428_10171598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642	Open in IMG/M
3300027907\|Ga0207428_10819180	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300027909\|Ga0209382_10105259	All Organisms → cellular organisms → Bacteria	3302	Open in IMG/M
3300027909\|Ga0209382_10136819	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300027909\|Ga0209382_10191849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2346	Open in IMG/M
3300027909\|Ga0209382_10685284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300028812\|Ga0247825_11308662	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300028812\|Ga0247825_11360170	Not Available	520	Open in IMG/M
3300031226\|Ga0307497_10097916	Not Available	1137	Open in IMG/M
3300031538\|Ga0310888_10315512	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031547\|Ga0310887_10372688	Not Available	833	Open in IMG/M
3300031548\|Ga0307408_101586031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300031562\|Ga0310886_10975517	Not Available	542	Open in IMG/M
3300031854\|Ga0310904_10158125	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031892\|Ga0310893_10022077	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300031911\|Ga0307412_11524792	Not Available	608	Open in IMG/M
3300031940\|Ga0310901_10037687	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300032013\|Ga0310906_11423033	Not Available	509	Open in IMG/M
3300032075\|Ga0310890_10035730	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300032122\|Ga0310895_10065819	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300032144\|Ga0315910_10007145	All Organisms → cellular organisms → Bacteria	8912	Open in IMG/M
3300032179\|Ga0310889_10672071	Not Available	539	Open in IMG/M
3300032180\|Ga0307471_100393110	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300032211\|Ga0310896_10886457	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300033412\|Ga0310810_11215309	Not Available	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.33%
Environmental	Environmental	48.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.33%
Terrestrial	Environmental → Terrestrial	40.67%
Aquatic	Environmental → Aquatic	8.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.33%
Sediment	Environmental → Aquatic → Sediment	4.00%
Marine	Environmental → Aquatic → Marine	2.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.33%
Freshwater	Environmental → Aquatic → Freshwater	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.67%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.00%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	25.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.00%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.00%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00603590	2088090015	Soil	VLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
MRS1b_0638.00001720	2162886011	Miscanthus Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
ARSoilOldRDRAFT_0155582	3300000044	Arabidopsis Rhizosphere	VLFFEFFPAFVALVGVIAAILLYMKDRQARDNNEPEDPVTPRDPSRTDDDGRTALRPSMRA*
INPhiseqgaiiFebDRAFT_1054523862	3300000364	Soil	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
JGI11615J12901_113270292	3300000953	Soil	VLFFEFFPAFVAFVGVIAAILLYMKDRQARDNNEPEDPVTPRDPSRKDDDGPSALRPSMRA*
soilL1_100491532	3300003267	Sugarcane Root And Bulk Soil	VPFELKDVLFFEFFPLFVALVGVVAAVFLFVKDRRARQNNEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0055471_102477971	3300003987	Natural And Restored Wetlands	VALVGVVAAVFLFMKDRRAREANEPEDPIAPRKEPTPDDDEGGAGLRPSMRA*
Ga0055467_100174141	3300003996	Natural And Restored Wetlands	VLLFEFFPLFVALVGVVAAVFLFMKDRRAREANEPEDPIAPRKEPTPDDDEGGAGLRPSMRA*
Ga0062593_1001695582	3300004114	Soil	LHRLYARLMLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0062593_1012835852	3300004114	Soil	VLFFEFFPLFVALVGVVAAVFLFVKDRRARKSNEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0063356_1000279512	3300004463	Arabidopsis Thaliana Rhizosphere	MLLFEFFPLFVALVGVVAAMFLFMKDRRARAANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0063356_1003714313	3300004463	Arabidopsis Thaliana Rhizosphere	MLLFEFFPLFVALVGVIAAVLLYMKDRSARANNEAEDPITPRDPSRKDDDGRPGLRPSMRP*
Ga0063356_1037406072	3300004463	Arabidopsis Thaliana Rhizosphere	VLFFEFFPLFVALVGGVAAVLLFMKDRSARANNEAEDPITPPDPTRKDDDGRPGLRPSMRA*
Ga0063356_1048193032	3300004463	Arabidopsis Thaliana Rhizosphere	LVVALIGVVAAVFLFIKDRRARQANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0062592_1025406862	3300004480	Soil	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0062591_1026998191	3300004643	Soil	MLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0065707_104683371	3300005295	Switchgrass Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGP
Ga0070690_1001132282	3300005330	Switchgrass Rhizosphere	MLFFEFFPLFVALIGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA*
Ga0066388_1008725942	3300005332	Tropical Forest Soil	VLFFEFFPLFVALVGVVAAILLYMKDRQARDNNEPEDPITPRDPSAKVDEGGRQGLRPSMRA*
Ga0068869_1000729022	3300005334	Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMKDRQARDNNEPEDPVTPRDPSRKDDDGPSALRPSMRA*
Ga0070680_1008179711	3300005336	Corn Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070680_1017134972	3300005336	Corn Rhizosphere	LVGVVAAVFLFVKDRRARKSNEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0068868_1005026652	3300005338	Miscanthus Rhizosphere	MLLFEFFPLFVALVGVIAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070687_1012429411	3300005343	Switchgrass Rhizosphere	FEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA*
Ga0070669_1004920702	3300005353	Switchgrass Rhizosphere	FEFFPLFVALVGAVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070675_1001685081	3300005354	Miscanthus Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA*
Ga0070671_1012534392	3300005355	Switchgrass Rhizosphere	KDVLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070701_111084861	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPLFVAMVGVVAAIFLFMKDRRARAANEPEDPITSRKPASADDDDRP
Ga0070705_1007193642	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMRDRQARDNNEPEDPVTPRDSSRKDDDGAAALRPSMRA*
Ga0070700_1013505812	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0068867_1007649362	3300005459	Miscanthus Rhizosphere	VLFFEFFTLFVGLVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070685_102643932	3300005466	Switchgrass Rhizosphere	MLFFEFFPLFVALVGVIAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070698_1011939302	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMRDRQARDNNEPDDPVTPRDPSRKDDDGPGALRPSMRA*
Ga0070699_1016592222	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPAFVAVIGVIATILLYMRDRQARDNNEPDDPVAPRDPSRKDDDGPAALRPSMRA*
Ga0070697_1003306422	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMRDRQARDNNEPEDPVTPRDPSRKDDDGPAALRPSMRA*
Ga0070695_1015448152	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPLFVGLVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0070696_1005039712	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	HRLYARLMLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0070704_1016636281	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMRDRQARDNNEPDDPVAPRDPSRKDDDGPAALRPSMRA*
Ga0068866_108565181	3300005718	Miscanthus Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0068860_1003231402	3300005843	Switchgrass Rhizosphere	MLFFEFFPLFVALVGGVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0075417_104908562	3300006049	Populus Rhizosphere	VLFFEFFPLFVAVVGVVAAVLLYVKDRAARENNEADDPITPRDPSRKDDDSRPNLRPSMRA*
Ga0075422_100230493	3300006196	Populus Rhizosphere	DGPSGELKDMLFFEFFPLFVALVGVVAAVFLFVKDRRARKTNEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0075422_102951993	3300006196	Populus Rhizosphere	MLLFEFFPLFVALVGVTAAVLLYMKDRSARANNEAEDPITPRDPSRKDDDGRPGLRPSMRP*
Ga0075422_103594232	3300006196	Populus Rhizosphere	VLFFEFFPLFVAVVGVVAAVLLYVRDRSARANNEAEDPVTPRDPSRKDDDGRPGVRPSMRA*
Ga0075428_1000233613	3300006844	Populus Rhizosphere	MLLFEFFPLFVALVGVIAAVLLYMKDRSARANNEAEDPITPPDPSRKDDDGRPGLRPSMRP*
Ga0075421_1000340255	3300006845	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVLLFMKDRRAREANEPEDPVAQRGEPSEDDDKGGKGLRPSMRA*
Ga0075421_1002218553	3300006845	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0075421_1003104804	3300006845	Populus Rhizosphere	MLLFEFFPLFVALVGAVVAVLLFMKDRTARENNEAEDPITPPDPSRKDDDGRPGLRPSMRP*
Ga0075421_1006495392	3300006845	Populus Rhizosphere	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0075421_1012904582	3300006845	Populus Rhizosphere	MLFFEFLPLFVALVGAVVAVLLYMKDRAARENNEAEDPITPRDPSRKDDDSRPGLRPSMRA*
Ga0075421_1014092443	3300006845	Populus Rhizosphere	VLFFEFFPLFVALVGVVAAVLLYMKDRAARENDEPEDPITPRDPSRKDEDGGGPGLRPSMRA*
Ga0075431_1013106161	3300006847	Populus Rhizosphere	PVLFFEFFPLFVALVGAVVAVLLYMKDRAARENDEPEDPITPRDPSRKDEDGGGPGLRPSMRA*
Ga0075433_100108822	3300006852	Populus Rhizosphere	VLFFEFGPFVLAIFSFIAVIVLFVKDRQARQNNEPEDPITPRDPSRKDDDGPSALRPSMRA*
Ga0075420_1002265441	3300006853	Populus Rhizosphere	RSTLRAAGMLLFEFFPLFVALVGVIAAVLLYMKDRSARANNEAEDPITPRDPSRKDDDGRPGLRPSMRP*
Ga0075420_1004751172	3300006853	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVVLFMKDRRAREANEPEEPIAKRREPSPDDDEGGPGLRPSMRA*
Ga0073934_1000026022	3300006865	Hot Spring Sediment	VLLFEFFPLFVTIVGLVAVIILFRKDRRARANNEPEEPIARRREPSPDDDEGGPGLRPSMRA*
Ga0075434_1008685961	3300006871	Populus Rhizosphere	TVLFFEFFPAFVAVVGVIAAILLYMKDRQARANNEPEAPVTPRDPSRTDDDGRAALRPSMRA*
Ga0075434_1022733481	3300006871	Populus Rhizosphere	HEDNVCTPLRKCPWYSESRPVLFFEFFPLFVALVGVIAAILLYMKDRQARANNEQEEPITPPDPSRGDDDGPAALRPSMRA*
Ga0075429_1002921013	3300006880	Populus Rhizosphere	CARSTLGYDVLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0075429_1007639852	3300006880	Populus Rhizosphere	FEFFPLFVALVGVVAAVLLFMKDRRAREANEPEDPVAQRGEPSEDDDKGGKGLRPSMRA*
Ga0075429_1010693312	3300006880	Populus Rhizosphere	VLFFEFFPLFVALVGVVAAVLLYVKDRAARENNEADDPITPRDPSRKDDDRRPNLRPSMRA*
Ga0068865_1020716152	3300006881	Miscanthus Rhizosphere	VLFFEFFPLFVALVGVIAAILLYMKDRQARANNEQEEPITPPDPSRGDDDGPAALRPSMRA*
Ga0075419_113681341	3300006969	Populus Rhizosphere	IHAHRQHSCGCVARCDGPSGELKDMLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0079218_100880962	3300007004	Agricultural Soil	MLLFEFFPLFVALVGVVAAVLLFMKDRRAREANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0079218_101358303	3300007004	Agricultural Soil	VLLFEFFPLFVALLGVVAAVFLFLKDRRARRANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0079218_113022811	3300007004	Agricultural Soil	VLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIARRKEPSPDDDKGGPGLRPSMRA*
Ga0105250_105419442	3300009092	Switchgrass Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFVKVRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0111539_1000080015	3300009094	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARDANEPEDPIAQRREPSPDDDEGGPGLRPSMRA*
Ga0111539_109432051	3300009094	Populus Rhizosphere	MVLWGDTVLFFEFFPAFVAVVGVIAAILLYMKDRQARANNEPEAPVTPRDPSRTDDDGRAALRPSMRA*
Ga0075418_115129743	3300009100	Populus Rhizosphere	MLLFEFFPLFVALIGVIAAVLLYMKDRSARANNEAEDPITPPDPSRKDDDGR
Ga0114129_106172582	3300009147	Populus Rhizosphere	VLFFEFFPLFVALVGVVAAVLLYVKDRAARENNEADDPITPRDPSRKDDDSRPNLRPSMRA*
Ga0114129_128099452	3300009147	Populus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMRDRQARDNNEPEDPVTPRDSSRKDDDGPAALRPSMRA*
Ga0105243_101153602	3300009148	Miscanthus Rhizosphere	LNPSWYPESRPVLFFEFFPLFVALVGVIAAILLYMKDRQARENNEQEDPVTPPDPSRRDDDGRAGLRPSMRA*
Ga0111538_102033502	3300009156	Populus Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPVAQRKEPSPDDDKGGPGLRPSMRA*
Ga0111538_107698141	3300009156	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPITPRKEPSPDDDEGGPGLRPSM
Ga0105092_103384571	3300009157	Freshwater Sediment	VLLFEFFPLFVALVGVVAAVLLFMKDRRARAANEPEEPMAQRREGPNDDDDTRPSLRPSMRA*
Ga0105242_110819721	3300009176	Miscanthus Rhizosphere	ESRPVLFFEFFPLFVALVGVIAAILLYMKDRQARENNEQEDPVTPPDPSRRDDDGRAGLRPSMRA*
Ga0105248_116388652	3300009177	Switchgrass Rhizosphere	PQLHRLHARLKDVLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA*
Ga0105249_122147492	3300009553	Switchgrass Rhizosphere	MLLFEFFPLFVALVGVVAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0105249_123925661	3300009553	Switchgrass Rhizosphere	TRHTDTVLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0105252_101500281	3300009678	Soil	LFEFFPLFVALVGVVAAILLFMKDRRARAANEPEDPITPRKPPSPDDDEGGPGLRPSMRA
Ga0126304_100001074	3300010037	Serpentine Soil	VLFFEFFPLFVALVGVVAAVFLFMRDRRARAANEPEDPIAQRKEPSPDDDERGPGLRPSMRA*
Ga0126382_101033582	3300010047	Tropical Forest Soil	VLFFEFFPLLVALVGVVAAILLYMKDRQARDNNEPEDPITPRDQSAKVDEGGRQGLRPSMRA*
Ga0126382_114405262	3300010047	Tropical Forest Soil	VLFFEFGPFVLAIFSFIAAILLYGKDRQARENNEPEDPITPPDPSRIDDDARGPLRPSMRA*
Ga0126377_100617934	3300010362	Tropical Forest Soil	VLFFEFFPLFVALVGVVAAILLYMKDRQARDNNEPEDPITAPDPSRRDDGGRPGLRPSMRA*
Ga0126377_116746802	3300010362	Tropical Forest Soil	VLFFEFFPLFVALVGVVAAILLFMKDRQARDSNEPEDPITPRDPSGKPDESGRGLRPSMRA*
Ga0126377_127676902	3300010362	Tropical Forest Soil	VLFFEFFPAFVAMVGVIAAILLYMKDRQARENNEQEDPITPPDPSRRDDDGRAGLRPSMRA*
Ga0126379_119939321	3300010366	Tropical Forest Soil	VLFFEFFPLFVALVGVVASIFLYMKDRQARDNNEPEDPITPRDSSAKADEGGRQ
Ga0134127_104630062	3300010399	Terrestrial Soil	VLFFEFFPLFVALVGVVAAIFLFMKDRRARADNEPEDPITPRGEPSEDDEKGGKGLRPSMRA*
Ga0137436_10273731	3300011423	Soil	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRKEPSPDDDKGAPGRRPSMRA*
Ga0137464_10641212	3300011434	Soil	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPLAQRKEPSPDDDKGAPGRRPSMRA*
Ga0137458_10153413	3300011436	Soil	FEFFPLFVALVGAVAVIFLFMKDRRARANNEPEDPIAQRREPSPDDDEGGPGLRPSMRA*
Ga0137432_10378141	3300011439	Soil	MLLFEFFPLFVALVGVVAAILLFMKDRRARAANEPEDPITPRKPPSPDDDEGGPGLRPSMRA*
Ga0157295_101948932	3300012906	Soil	MLFFEFFPLFVALVGVVAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA*
Ga0126375_104270202	3300012948	Tropical Forest Soil	VLFFEFFPLFVALVGVVAAILLYMKDRQARDNNEPEDPITPRDQSAKVDEGGRQGLRPSMRA*
Ga0126375_118247322	3300012948	Tropical Forest Soil	VLFFEFFPLFVALAGGLAAVFLFMKDRRARKANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0157378_108177822	3300013297	Miscanthus Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAPRREPSPDDDKGGPGLRPSMRA*
Ga0157375_117212082	3300013308	Miscanthus Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0157380_122446381	3300014326	Switchgrass Rhizosphere	KSSVWVSSVTSPLHSTRHTDTVLFFEFFPLFVAVVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA*
Ga0132258_100775726	3300015371	Arabidopsis Rhizosphere	MLFFEFFPAVVALLGVVAAILLYVRDRRARDNNEPEDPIAPRRAPSQDDDDGRPGLRPSMRA*
Ga0132256_1015922232	3300015372	Arabidopsis Rhizosphere	VLFFEFGPFVLAIFSFIAAILLFIKDREARQNNEPEDPVTPRDPSRKDDDGPAALRPSMRA*
Ga0132255_1001494003	3300015374	Arabidopsis Rhizosphere	MVLWGDTVLFFEFFPAFVAVVGVIAAILLYMKDRQARANNEPEAPVTPRDPSRTDDDVRAALRPSMRA*
Ga0190266_105383262	3300017965	Soil	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0184628_101088872	3300018083	Groundwater Sediment	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPLAQRKEPSPDDDKGAPGRRPSMRA
Ga0190270_113890382	3300018469	Soil	MLLFEFFPLFVALVGVVAAILLFMKDRRARAANEPEDPITPRKPPSPDDDEGGPGLRPSMRA
Ga0190274_106153242	3300018476	Soil	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0209172_10000242115	3300025310	Hot Spring Sediment	VLLFEFFPLFVTIVGLVAVIILFRKDRRARANNEPEEPIARRREPSPDDDEGGPGLRPSMRA
Ga0210087_10936912	3300025559	Natural And Restored Wetlands	VLLFEFFPLFVALVGVVAAVFLFMKDRRAREANEPEDPIAPRKEPTPDDDEGGAGLRPSMRA
Ga0207680_108524722	3300025903	Switchgrass Rhizosphere	MLLFEFFPLFVALVGVIAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0207680_109514542	3300025903	Switchgrass Rhizosphere	MLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA
Ga0207645_100652891	3300025907	Miscanthus Rhizosphere	MDFTVPEIALLALVGVIAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0207687_103447371	3300025927	Miscanthus Rhizosphere	VLFFEFFPAFVAVVGVIAAILLYMKDRQARDNNEPEDPVTPRDPSRKDDDGPSALRPSMR
Ga0207701_107217862	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPVAQRKEPSPDDDKGGPGLRPSMRA
Ga0207709_105708162	3300025935	Miscanthus Rhizosphere	VLFFEFVPLFVAMVGVVAAIFLFMKDRRARAANEPEDPITSRKPASADDDDRPNLRPSMR
Ga0207712_119445661	3300025961	Switchgrass Rhizosphere	MLLFEFFPLFVALVGVVAAVFLFMKDRRARRANEPEEPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0207648_104714692	3300026089	Miscanthus Rhizosphere	VLFFEFFPLFVGLVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0207674_105976342	3300026116	Corn Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFVKDRRARKSNEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0207675_1016509861	3300026118	Switchgrass Rhizosphere	LYARLMLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0207683_105844471	3300026121	Miscanthus Rhizosphere	ALVGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA
Ga0209814_100309261	3300027873	Populus Rhizosphere	MLLFEFFPLFVALVGVIAAVLLYMKDRSARANNEAEDPITPPDPSRKDDDGRPGLRPSMR
Ga0209481_100411422	3300027880	Populus Rhizosphere	MLLFEFFPLFVALVGAVVAVLLFMKDRTARENNEAEDPITPPDPSRKDDDGRPGLRPSMR
Ga0209481_104276262	3300027880	Populus Rhizosphere	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0209486_100655692	3300027886	Agricultural Soil	MLLFEFFPLFVALVGVVAAVLLFMKDRRAREANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0209486_101177042	3300027886	Agricultural Soil	VLLFEFFPLFVALLGVVAAVFLFLKDRRARRANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0207428_100029008	3300027907	Populus Rhizosphere	VLFFEFFPLFVAVVGVVAAVLLYVRDRSARANNEAEDPVTPRDPSRKDDDGRPGVRPSMR
Ga0207428_101715982	3300027907	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARDANEPEDPIAQRREPSPDDDEGGPGLRPSMRA
Ga0207428_108191803	3300027907	Populus Rhizosphere	MLLFEFFPLFVALVGVIAAVLLYMKDRSARANNEAEDPITPRDPSRKDDDGRPGLRPSMR
Ga0209382_101052591	3300027909	Populus Rhizosphere	ALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0209382_101368193	3300027909	Populus Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0209382_101918494	3300027909	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVLLFMKDRRAREANEPEDPVAQRGEPSEDDDKGGKGLRPSMRA
Ga0209382_106852841	3300027909	Populus Rhizosphere	VLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0247825_113086622	3300028812	Soil	PSGELKDMLFFEFFPLFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0247825_113601701	3300028812	Soil	MLFFEFFPLFVAFVGVIAAVLLYMRDRSARENNEAEDPITPRDPSRKDDDGRPGLRPSMR
Ga0307497_100979162	3300031226	Soil	MLLFEFFPLFIALVGVVAAVFLFMKDRRARRANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0310888_103155121	3300031538	Soil	VLLFEFFPLFVAMVGVVAAIFLFMKDRRTRAANEPEDPITQRKPVSKDDDEGGPGLRPSMRA
Ga0310887_103726881	3300031547	Soil	LDTRLAPAIEDMLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPVAQRKEPSPDDDKGGPGLRPSMRA
Ga0307408_1015860312	3300031548	Rhizosphere	VLLFEFFPLFVALVGVVAAVLLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0310886_109755172	3300031562	Soil	LFVALVGVVAAVFLFVKDRRARKANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0310904_101581252	3300031854	Soil	MLFFEFFPLFVALVGVVAAVFLFVKDRRARKGNEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0310893_100220772	3300031892	Soil	MLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAPRKEPSPDDDKGGPGLRPSMRA
Ga0307412_115247922	3300031911	Rhizosphere	VLFFEFFPLFVALVGVVAAVFLFMKDRRAREANEPEDPIAQRKEPSPDDDEGGPGLRPSMRA
Ga0310901_100376871	3300031940	Soil	VLLFEFFPLFVAMVGVVAAIFLFMKDRRTRAANEPEDPITQRKPISKDDDEGGPGLRPSMRA
Ga0310906_114230333	3300032013	Soil	VLFFEFFPLFVALVGVIAAILLYMKDRQARANNEQEEPITPPDPSRGDDDGPA
Ga0310890_100357301	3300032075	Soil	VLLFEFFPLFVAMVGVVAAIFLFMKDRRTRAANEPEDPITQRKPVSKDDDEGGPGLRPS
Ga0310895_100658191	3300032122	Soil	LAPAIEDMLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEDPIAQRKEPSPDDDKGGPGLRPSMRA
Ga0315910_100071455	3300032144	Soil	VLLFEFFPLFVALVGAVAVIFLFMKDRRARANNEPDDPITQRKEPSPDDDEGGPGLRPSMRA
Ga0310889_106720711	3300032179	Soil	FFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRREPSPDDDKGGPGLRPSMRA
Ga0307471_1003931102	3300032180	Hardwood Forest Soil	VLFFEFFPAFVTLVGVIAVVLLYMKDRQARDNNEPEEPVTPRDPSRTDDDGRGALRPSMR
Ga0310896_108864572	3300032211	Soil	SRAAISDMLLFEFFPLFVALVGVVAAVFLFMKDRRARAANEPEEPIAQRREPSPDDDKGGPGLRPSMRA
Ga0310810_112153091	3300033412	Soil	VLFFEFFPLFVALVGVVAAVFLFVKDRRARKSNEPEDPIAQRKEPSPDDDKGGPGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences