NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F047144

Metagenome / Metatranscriptome Family F047144

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F047144
Family Type Metagenome / Metatranscriptome
Number of Sequences 150
Average Sequence Length 47 residues
Representative Sequence AAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLAERATAALA
Number of Associated Samples 127
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.00 %
% of genes near scaffold ends (potentially truncated) 96.67 %
% of genes from short scaffolds (< 2000 bps) 90.67 %
Associated GOLD sequencing projects 124
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(14.000 % of family members)
Environment Ontology (ENVO) Unclassified
(34.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.
1prs_05922020
24MG_01194450
3JGI10214J12806_105020981
4C688J35102_1182499841
5Ga0055467_102781551
6Ga0062590_1022599402
7Ga0062591_1023284531
8Ga0062380_100768041
9Ga0070660_1004704981
10Ga0070661_1015828521
11Ga0070674_1018522551
12Ga0070673_1002825462
13Ga0070703_103189701
14Ga0070662_1017610342
15Ga0068867_1009575992
16Ga0070686_1001001803
17Ga0070704_1019621661
18Ga0070664_1004155521
19Ga0070664_1015037162
20Ga0068854_1002814941
21Ga0070702_1002654402
22Ga0068859_1015995871
23Ga0081455_104449371
24Ga0081455_107485161
25Ga0097621_1001100104
26Ga0075435_1012914262
27Ga0105048_105819963
28Ga0105245_100552185
29Ga0105243_100900934
30Ga0130016_104003861
31Ga0126377_100930831
32Ga0134124_107169731
33Ga0134123_105704201
34Ga0105246_106752162
35Ga0157329_10089632
36Ga0136612_100458701
37Ga0157289_100487612
38Ga0157289_102808742
39Ga0157282_101806881
40Ga0157290_101904902
41Ga0157308_100178471
42Ga0157301_104077611
43Ga0164303_114630261
44Ga0164308_105466271
45Ga0157371_116031721
46Ga0157378_121181871
47Ga0163162_102438211
48Ga0157372_111014682
49Ga0075355_12170702
50Ga0163163_124348141
51Ga0157380_105060731
52Ga0157380_119052462
53Ga0181522_106326682
54Ga0157377_104875282
55Ga0157376_128503531
56Ga0173483_100595901
57Ga0173480_108868313
58Ga0167629_10214851
59Ga0132258_117504481
60Ga0132256_1032899981
61Ga0132256_1036640501
62Ga0184628_104365941
63Ga0190275_103416523
64Ga0190270_101164751
65Ga0206353_104172892
66Ga0224512_101264402
67Ga0224510_104716722
68Ga0247747_10149471
69Ga0247786_10073511
70Ga0247788_10210992
71Ga0247790_100754081
72Ga0247800_10366902
73Ga0209641_100576251
74Ga0209341_101616961
75Ga0210113_10149483
76Ga0207688_110628342
77Ga0207684_113187251
78Ga0207707_107936872
79Ga0207657_103462902
80Ga0207681_116922711
81Ga0207694_109907472
82Ga0207659_101952233
83Ga0207659_102394243
84Ga0207659_115123251
85Ga0207690_100794784
86Ga0207704_108155002
87Ga0207691_101696031
88Ga0207711_101245524
89Ga0207668_103841411
90Ga0207640_109826162
91Ga0208530_10086692
92Ga0207639_117578901
93Ga0208293_10051631
94Ga0207708_115809171
95Ga0207674_105311132
96Ga0207683_105241402
97Ga0207683_114120222
98Ga0209464_103233182
99Ga0209797_102499522
100Ga0209813_104259531
101Ga0209974_103530301
102Ga0209698_112576281
103Ga0209069_101673013
104Ga0268266_110661241
105Ga0268265_122169821
106Ga0247828_101313951
107Ga0247828_106661641
108Ga0247818_109904802
109Ga0247822_104929592
110Ga0247822_117875632
111Ga0247819_106200321
112Ga0307503_101404411
113Ga0307294_102074422
114Ga0311350_103059602
115Ga0311348_106266791
116Ga0311348_113867592
117Ga0247826_100724623
118Ga0247826_103753732
119Ga0247826_109345862
120Ga0247826_113456601
121Ga0311351_111373301
122Ga0318546_107236771
123Ga0310907_107835471
124Ga0310904_102643202
125Ga0310900_101158653
126Ga0308176_109244801
127Ga0315278_122694472
128Ga0310897_104210752
129Ga0310890_100728573
130Ga0315281_104387071
131Ga0315283_106828381
132Ga0315283_107025172
133Ga0315276_125747012
134Ga0315271_103128321
135Ga0315271_104766051
136Ga0315271_106113691
137Ga0315271_107826802
138Ga0315271_108286352
139Ga0315271_109787152
140Ga0315270_103476851
141Ga0315287_103761261
142Ga0315275_104833592
143Ga0247829_100610235
144Ga0247829_101318043
145Ga0247829_109205622
146Ga0247830_104644641
147Ga0247830_113295332
148Ga0372943_0995517_413_556
149Ga0373948_0017544_1219_1335
150Ga0373958_0143056_2_142
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 28.77%    β-sheet: 0.00%    Coil/Unstructured: 71.23%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045AAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLAERATAALASequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
72.0%28.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Sediment
Bog
Wetland Sediment
Polar Desert Sand
Freshwater
Natural And Restored Wetlands
Sediment
Groundwater Sediment
Watersheds
Soil
Terrestrial Soil
Tropical Forest Soil
Glacier Forefield Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Soil
Soil
Soil
Green-Waste Compost
Natural And Restored Wetlands
Rice Paddy Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Soil
Fen
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Endosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
Wastewater
9.3%9.3%3.3%14.0%3.3%3.3%4.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
prs_059220202070309004Green-Waste CompostMAAGVANIPRELDPDDPLADLPGNPQSAWKRTVLATLVERALAALD
4MG_011944502170459019Switchgrass, Maize And Mischanthus LitterDPSDPLAELPGNPQSAWKRRALATLVERALADVSPAS
JGI10214J12806_1050209813300000891SoilLVAAGVANVPRRLDPSDPLAELPGNPQSAWKRRALATLVERALADVSPGS*
C688J35102_11824998413300002568SoilRRGDEISLAAAGVSNIPRALDPADPLAGLPGHPQSAWKRKVLTTLVERAGAALTG*
Ga0055467_1027815513300003996Natural And Restored WetlandsRRDNDIRLVAAGVANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0062590_10225994023300004157SoilAGIANIPRALDVADPAAGLPGDPQTGWKRRALTTLAERALAAVA*
Ga0062591_10232845313300004643SoilDDTRLVAAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLVERATAALA*
Ga0062380_1007680413300004779Wetland SedimentAAGVANVPRAIDPADPLAGLPGHPQSAWKRQVLATLVERAGAALAATAPP*
Ga0070660_10047049813300005339Corn RhizosphereRLVAAGVANIPRELDPVDPLAGLPGNPQTGWKRRALETLVERATAAVS*
Ga0070661_10158285213300005344Corn RhizosphereGDETRLVAAGVANVPRALDPTDPLAGLPGNPQTAWKRRALETLAERATAALA*
Ga0070674_10185225513300005356Miscanthus RhizosphereRLVAAGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0070673_10028254623300005364Switchgrass RhizosphereVANIPRELDPVDPLAGLPGNPQTGWKRRALETLVERATAAVA*
Ga0070703_1031897013300005406Corn, Switchgrass And Miscanthus RhizosphereVAAGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0070662_10176103423300005457Corn RhizosphereAARRGNEVALVASGVANIPRTLDPADPLAGLPGNPQTAWKRHALTTLAERAVAAVS*
Ga0068867_10095759923300005459Miscanthus RhizosphereGIANIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0070686_10010018033300005544Switchgrass RhizosphereRGNDVRLVAAGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0070704_10196216613300005549Corn, Switchgrass And Miscanthus RhizosphereVAAGVANVPVELDGDDGLAGLPGNPQSAWKRHVLATLVERAREAVA*
Ga0070664_10041555213300005564Corn RhizosphereGNDIRLVAAGIANIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0070664_10150371623300005564Corn RhizosphereVRLVAAGVANVPRELDPDDPLAGLPGNPQTAWKRTLLATLAGRALDRVR*
Ga0068854_10028149413300005578Corn RhizosphereTLVAAGVANIPRALDPADPLEGLPGNPQTGWKRTVLATLVERAVAQL*
Ga0070702_10026544023300005615Corn, Switchgrass And Miscanthus RhizosphereRLVATGIANIPRALDQADPLAGLPGNPQSAWKRGALATLAERALAAVA*
Ga0068859_10159958713300005617Switchgrass RhizosphereRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0081455_1044493713300005937Tabebuia Heterophylla RhizosphereARADSETRLVAAGVANVPRALDAADPLAGLPGNPQSAWKRDVLARLVERAKAAVA*
Ga0081455_1074851613300005937Tabebuia Heterophylla RhizosphereRLGAAGVANVPRALDPADPLAGLPGNPQTAWKRRALETLVARATAALG*
Ga0097621_10011001043300006237Miscanthus RhizosphereRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0075435_10129142623300007076Populus RhizosphereAARRGNDVRLVATGIANVPRELDPNDPLADLPGNPQTHWKRQLLATLVERAVASI*
Ga0105048_1058199633300009032FreshwaterVRVVAGGVANIPVALDPADPLADLPGNPQTGWKRDLLATLVARAV
Ga0105245_1005521853300009098Miscanthus RhizosphereVAAARRGNDVRLVAAGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0105243_1009009343300009148Miscanthus RhizosphereAARRGNDIRLVAAGIANIPRALDVADPAGGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0130016_1040038613300009868WastewaterAAGVANVPRALAAADPLAGLPGSPQSAWKRELLRALVERALVAVTPES*
Ga0126377_1009308313300010362Tropical Forest SoilAARRGDDVRMVAAGVANIPRELDASDALAGLPGNPQSEWKARVLATLVERARAALG*
Ga0134124_1071697313300010397Terrestrial SoilRRGNDIRLVAAGIANIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0134123_1057042013300010403Terrestrial SoilIPRALDVADPAGGLPGNPQTCWKRRALTTLAERALAAVA*
Ga0105246_1067521623300011119Miscanthus RhizosphereDPADPLAGLPGNPQTGWKRRALETLAERAAAAVA*
Ga0157329_100896323300012491Arabidopsis RhizosphereEETTLVAAGVANVPRRLDPSDPLAELPGNPQSAWKRRALATLVERALADVSPGS*
Ga0136612_1004587013300012680Polar Desert SandVWLVAAGVANIPRAIDPEDPLSGLPGHPQSAWKRQVLSTLVERALAAVDD*
Ga0157289_1004876123300012903SoilGGDIRLVAAGVANIPRALDPADPAAGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0157289_1028087423300012903SoilLDPADPLAGLPGHPQSAWKRTVLATLVERAGVALDTTP*
Ga0157282_1018068813300012904SoilRLDPSDPLAELPGNPQSAWKRRALATLVERALADVSPGS*
Ga0157290_1019049023300012909SoilAAGVANVPRELDPADPLAGLPGNPQTGWKRRALETIAERAAAAVA*
Ga0157308_1001784713300012910SoilTGDGLSLAAAGVANIPRQLDPTDPLAGLPGHPQSAWKRTVLATLVERAGVALDTTP*
Ga0157301_1040776113300012911SoilRRGNDVRLVAAGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA*
Ga0164303_1146302613300012957SoilPRELDAADPLAGLPGNPQTGWKRRALETLVERATAAVA*
Ga0164308_1054662713300012985SoilPTDPLAGLPGHPQSAWKRTVLATLVERATAALAGR*
Ga0157371_1160317213300013102Corn RhizosphereTRLVAAGVANVPRELDPADPLAGLPGNPQTGWKRRALETLAERAAAAVA*
Ga0157378_1211818713300013297Miscanthus RhizosphereGVANIPRELDAADPLAGLPGNPQTGWKRRALETLVERATAAVA*
Ga0163162_1024382113300013306Switchgrass RhizospherePGTIDVADPAAGLPGNPQTGWKQRALTTLAERALAAVA*
Ga0157372_1110146823300013307Corn RhizosphereAVRRGTETRLVAAGVANIPRELDPVDPLAGLPGNPQTGWKRRALETLVERATAAVS*
Ga0075355_121707023300014322Natural And Restored WetlandsLVAAGVANVPRPLDPADPLEGLPGNPQSAWKRTVLATLVERASATLV*
Ga0163163_1243481413300014325Switchgrass RhizosphereLDPDDPLAWLPGHPQSAWKRTVLATLVERASAALDAGS*
Ga0157380_1050607313300014326Switchgrass RhizosphereGIANIPRALDQADPLAALPGNPQSAWKRGALATLAERALAAVA*
Ga0157380_1190524623300014326Switchgrass RhizosphereVAAARRDDTVRLVAAGVANVPRELDPDDPLAGLPGNPQTAWKRTLLATLAGRALDRVR*
Ga0181522_1063266823300014657BogDGGVRVVAGGVANIPVAVDPEDPLAGLPGNPQTMWKRTVLVTLSQRVVADVAAV*
Ga0157377_1048752823300014745Miscanthus RhizosphereAAARRGDDIRLVAAGIANIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0157376_1285035313300014969Miscanthus RhizosphereAAKRGAEIRLVAAGVANVPRELDPADPLAGLPGNPQTGWKRRALETLVERAIAAVG*
Ga0173483_1005959013300015077SoilSDIRLVAAGVANIPRALDPADPAAGLPGNPQTGWKRRALTTLAERALAAVA*
Ga0173480_1088683133300015200SoilLDPADPLAGLPGNPQTGWKRRALETLVERATAALA*
Ga0167629_102148513300015209Glacier Forefield SoilFVAAGVANIPRAVDPADPLAGLPGHPQSAWKRQILATLVERATAALAA*
Ga0132258_1175044813300015371Arabidopsis RhizosphereRVGDEVKLVAAGVANVPRALDPADPLADLPGNPQSAWKRTVLATLVERAVAQL*
Ga0132256_10328999813300015372Arabidopsis RhizosphereRLVASGVANVPRELDPADPLAGLPGNPQTRWKLRALETLVERAAAALA*
Ga0132256_10366405013300015372Arabidopsis RhizosphereLDPADPLAGLPGHPQSAWKRTVLATLVERATAALADA*
Ga0184628_1043659413300018083Groundwater SedimentDPADPLAGLPGHPQSAWKRTVLATLVERAGAALDAIP
Ga0190275_1034165233300018432SoilADGVRLVAAGVANIPRALDPDDPLRGLEGHPQTGWKRHLLTTLATRAREAVA
Ga0190270_1011647513300018469SoilVRLVAAGVANVPRELDPDDPLAGLPGNPQTAWKRTLLATLAGRALDRVR
Ga0206353_1041728923300020082Corn, Switchgrass And Miscanthus RhizosphereVAAGIANIPRALDVADPAAGLPGNPQTGWKQRALTTLAERALAAVA
Ga0224512_1012644023300022226SedimentVVAAGVANVPRELDPADPLAGLPGHAQTGWKRDLLAALVERALADVTA
Ga0224510_1047167223300022309SedimentGGGVRLAAAGVANIPRELDPADPLSGLPGHPQTGWKRDLLAALVERALAAV
Ga0247747_101494713300022737SoilPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA
Ga0247786_100735113300022883SoilRLVAAGVANIPRALDPEDPAAGLPGNPQTGWKRRALTTLAERALAAVA
Ga0247788_102109923300022901SoilGIANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA
Ga0247790_1007540813300022915SoilTLVAAGVANVPRRLDPSDPLAELPGNPQSAWKRRALATLVERALADVSPGS
Ga0247800_103669023300023263SoilALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA
Ga0209641_1005762513300025322SoilVANVPRELDTADPLAGLPGHPQSAWKRDVLATLVERAVAALGEPG
Ga0209341_1016169613300025325SoilPADPLAGLPGHPQSAWKRDVLAALVERAVAALGEPG
Ga0210113_101494833300025796Natural And Restored WetlandsAETRVVAAGIANIPRELDPDDPLAGLKGSPQSAWKRRALQTLVERAAARVA
Ga0207688_1106283423300025901Corn, Switchgrass And Miscanthus RhizosphereTRLVAAGVANVPRALDPTDPLAGLPGNPQTGWKRRALETLAERATAALA
Ga0207684_1131872513300025910Corn, Switchgrass And Miscanthus RhizosphereAGIANIPRALDVADPAGGLPGNPQTGWKRRALTTLAERALAAVA
Ga0207707_1079368723300025912Corn RhizosphereMDRDPAGVANVPRELDPADPLAGLPGNPQTGWKRRALETLVERANAAVG
Ga0207657_1034629023300025919Corn RhizosphereVAAVRRGTETRLVAAGVANIPRELDPVDPLAGLPGNPQTGWKRRALETLVERATAAVS
Ga0207681_1169227113300025923Switchgrass RhizosphereDPADPLAGLPGHPQSAWKRTVLATLVERATAGLQA
Ga0207694_1099074723300025924Corn RhizosphereRGNDIRLVAAGIANIPRALDVADPAGGLPGNPQTGWKRRALTTLAERALAAVA
Ga0207659_1019522333300025926Miscanthus RhizosphereALDPTDPLAGLPGNPQTAWKRRALETLAERATAALA
Ga0207659_1023942433300025926Miscanthus RhizosphereIPRALDVADPAGGLPGNPQTGWKRRALTTLAERALAAVA
Ga0207659_1151232513300025926Miscanthus RhizosphereARRGNEVALVASGVANIPRRLDPADPLAGLPGNPQTAWKRRALTTLAERAVAAVS
Ga0207690_1007947843300025932Corn RhizosphereIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA
Ga0207704_1081550023300025938Miscanthus RhizosphereGLSLAAAGVANIPRQLDPTDPLAGLPGHPQSAWKRTVLATLVERAGVALDTTP
Ga0207691_1016960313300025940Miscanthus RhizosphereSGVANIPRTLDPADPLAGLPGNPQTAWKRHALATLAERAVAAVS
Ga0207711_1012455243300025941Switchgrass RhizosphereGVANIPRTLDPADPLAGLPGNPQTAWKRHALATLAERAVAAVS
Ga0207668_1038414113300025972Switchgrass RhizosphereARRGDETRLVAAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLAERATAALA
Ga0207640_1098261623300025981Corn RhizosphereTLVAAGVANIPRALDPADPLEGLPGNPQTGWKRTVLATLVERAVAQL
Ga0208530_100866923300026009Rice Paddy SoilAAGVANVPRSLDPADPLANLTGNPQTGWKRRALETLVERATAALA
Ga0207639_1175789013300026041Corn RhizosphereIPRRLDPADPLAGLPGNPQTAWKRRALTTLAERAVAAVS
Ga0208293_100516313300026050Natural And Restored WetlandsRLVASGVANVPRELDPADPLAGLDGNPQTGWKRDLLAALVERALTALVR
Ga0207708_1158091713300026075Corn, Switchgrass And Miscanthus RhizosphereDEVTLVAAGVANIPRALDPADPLEGLPGNPQTGWKRTVLATLVERAVAQL
Ga0207674_1053111323300026116Corn RhizosphereVANVPRALDPADPLAGLPGNPQTAWKRRALETLVERATAALA
Ga0207683_1052414023300026121Miscanthus RhizosphereTGDELTLAAAGVANIPRPLDPADPLAGLPGHRQSAWKRTVLATLVERAGAALDAIP
Ga0207683_1141202223300026121Miscanthus RhizosphereIPRSLDPADPLAGLLGHPQSAWKRTVLATLVERATAGLQA
Ga0209464_1032331823300027778Wetland SedimentVPRALDPVDPLEGLPGNPQSAWKREVLAALVERALAELRPGS
Ga0209797_1024995223300027831Wetland SedimentGGARFVAAGVANVPRAIDPADPLAGLPGHPQSAWKRQVLATLVERAGAALAATAPP
Ga0209813_1042595313300027866Populus EndospherePRALDPADPLAGLPGNPQTAWKRRALETLAERATAALA
Ga0209974_1035303013300027876Arabidopsis Thaliana RhizosphereGDDIRLVAAGVANIPRVLDPADPASGLPGNPQTGWKRQALMTLAERALAAVA
Ga0209698_1125762813300027911WatershedsDPDDPLAELPGNPQSAWKRGLLATLVQRALTEIEG
Ga0209069_1016730133300027915WatershedsVANVPRSLDASDPLAALPGHPGSAWKRRLLATLVERALAAIA
Ga0268266_1106612413300028379Switchgrass RhizosphereDGLTLAAAGVANIPRSLDPADPLAGLPGHPQSAWKRTVLATLVERATAALADA
Ga0268265_1221698213300028380Switchgrass RhizospherePRRLDPADPLAGLPGNPQTAWKRRALTTLAERAVAAVS
Ga0247828_1013139513300028587SoilGVVAAARRDDTVRLVAAGVANVPRELDPDDPLAGLPGNPQTAWKRTLLATLAGRALDRVR
Ga0247828_1066616413300028587SoilRGAETHLAAAGVANIPVGLDPSDPLAGLKGSPQSAWKRRALATLVERAVARTA
Ga0247818_1099048023300028589SoilLDPADPLAGLPGNPQTAWKRRALETLVERATAALA
Ga0247822_1049295923300028592SoilAAARRGNEVALVASGVANIPRTLDPADPLAGLPGNPQTAWKRHALTTLAERAVAAVS
Ga0247822_1178756323300028592SoilDTVRLVAAGVANVPRELDPEDPLAGLPGNPQTAWKRTLLATLAGRALDRIR
Ga0247819_1062003213300028608SoilLVSVAAARHDDDTRLVAAGVANVPRALDPADPLAGLPGNPQTGWKRRALA
Ga0307503_1014044113300028802SoilRGNEVALVASGVANIPRALDPADPLAGLPGNPQTAWKRRALATLAERAVAAVS
Ga0307294_1020744223300028810SoilAAGVANIPRPLDPVDPLAGLPGHPQSAWKRTVLATLVERAGAALDATP
Ga0311350_1030596023300030002FenASRDGELTLAAAGVANIPRALDPADPLAGLPGHPQSAWKRTVLATLVERATAALS
Ga0311348_1062667913300030019FenARRDGATSLVAAGVANVPRALDPQDPLAGLPGNPQSSWKRIVLATLVERATAALA
Ga0311348_1138675923300030019FenRRDGVTSLVAAGVANVPRALDPADPLAGLPGNPQSAWKRTVLATLVERATAALD
Ga0247826_1007246233300030336SoilGEDVRLVAAGVANIPRKLDPADPLAGLPGNPQSAWKRDLLAALAERAVASVTSS
Ga0247826_1037537323300030336SoilDLTLAAAGVGNIPRALDPADPLAGLPGNPQSAWKRDLLAALVERAVAAVTRS
Ga0247826_1093458623300030336SoilGVANVPRALDPDDPLRGLEGNPQTGWKRHLLATLAARAQEAVA
Ga0247826_1134566013300030336SoilANIPRELDAADPLAGLPGNPQTGWKRRALETLVERATAAVA
Ga0311351_1113733013300031722FenVANIPRALDPADPLAGLPGHPQSAWKRTVLATLVERATAALS
Ga0318546_1072367713300031771SoilAAKRGGEVTLAAAGVANIPVGLDPADPLRDLPGNPQSEWKRPVVSALAERAVGALG
Ga0310907_1078354713300031847SoilVAAARRGDETRLVAAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLAERATAALA
Ga0310904_1026432023300031854SoilGSETRLVAAGVANVPRELDPADPLAGLPGNPQTGWKRRALETLAERAAAAVA
Ga0310900_1011586533300031908SoilNIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA
Ga0308176_1092448013300031996SoilAGVANIPRALDPADPASGLPGNPQTGWKRQALTTLAERALAAVA
Ga0315278_1226944723300031997SedimentRRGEDVRLVAAGVANIPRELDPSDPLAGLPGHPQSAWKRQVLAALVERAVTALQ
Ga0310897_1042107523300032003SoilRELDPADPLAGLPGNPQTGWKRRALETIAERAAAAVA
Ga0310890_1007285733300032075SoilIANIPRALDVADPAAGLPGNPQTGWKRRALTTLAERALAAVA
Ga0315281_1043870713300032163SedimentARSGVAITLVAAGIANIPRAIDPADPLAGLPGHPQSAWKRKVLETLVDRAVAAVARL
Ga0315283_1068283813300032164SedimentMLVAAGVANIPRALDPSDPLAGLPGHPGSAWKRQVLATLVERATAAVA
Ga0315283_1070251723300032164SedimentAAARRGDMLTLVAAGIANTPRALDPADPLAGLPGHPQSAWKRTVLVTLVERAVAALA
Ga0315276_1257470123300032177SedimentRRGDVLTLVAAGIANTPRALDPADPLAGLPGHPQSAWKRTVLATLVERAVAAVA
Ga0315271_1031283213300032256SedimentGVANIPRPLDQADPLAGLPGHPQSSWKRKVLETLVERAVASL
Ga0315271_1047660513300032256SedimentAAARRGDALTLVAAGVANIPRALDPADPLAGLPGHPQSAWKRTVLATLVERATAALR
Ga0315271_1061136913300032256SedimentRAIDPADPLAGLPGHPQSAWKRKVLETLVDRAVAAVARL
Ga0315271_1078268023300032256SedimentRALDPADPLAGLPGHPQSAWKRKVLATLVERAAAALHLPA
Ga0315271_1082863523300032256SedimentANIPRAIDPADPLAGLPGHPQSAWKLKVLETLVDRAVAAVARL
Ga0315271_1097871523300032256SedimentPRVLDPSDPLAGLPGHPGSAWKRKVLATLVERATATLHVPPRSRIR
Ga0315270_1034768513300032275SedimentVAAGIANIPRAIDPADPLAGLPGHPQSAWKRKVLETLVDRAVAAVARL
Ga0315287_1037612613300032397SedimentRGDVLTLVAAGIANIPRALDPADPLAGLPGHPQSAWKRTVLVTLVERAVAALA
Ga0315275_1048335923300032401SedimentGVANIPRVLDLSDPLAGLPGHPGSAWKRKVLATLVERATATLHVPPRSRIR
Ga0247829_1006102353300033550SoilALDPADPLAGLPGNPQSAWKRDLLAALVERAVAAV
Ga0247829_1013180433300033550SoilAGRDDTVRLVAAGVANVPRELDPDDPLAGLPGNPQTAWKRTLLATLAGRALDRVR
Ga0247829_1092056223300033550SoilAAGVANVPRALDPADPLAGLPGNPQTGWKRRALETLAERATAALA
Ga0247830_1046446413300033551SoilDPADLLAGLPGNPQSAWKRDLLAALVERAVAAVTRS
Ga0247830_1132953323300033551SoilAAARRGNDIRLVAAGIANIPRALDVADPAAGLPGNPQTGWKQRALTTLAERALAAVA
Ga0372943_0995517_413_5563300034268SoilMAAAGVANIPHWIDPADVLADLPGNEQTGWKRKALETLAERAVARLA
Ga0373948_0017544_1219_13353300034817Rhizosphere SoilPRALDVADPAAGLPGNPQTGWKQRALTTLAERALAAVA
Ga0373958_0143056_2_1423300034819Rhizosphere SoilVAAGIANIPRALDVADPSGGLPGNPQTGWKRRALTTLAERALAAVA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.