Metagenome / Metatranscriptome Family F046933

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F046933
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	45 residues
Representative Sequence	MTFPMWQVQLERMRGLFAQRGLPWLDAREERALLDYLAAHAGTS
Number of Associated Samples	123
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.33 %
% of genes near scaffold ends (potentially truncated)	58.67 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.000 % of family members)
Environment Ontology (ENVO)	Unclassified (43.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF13417	GST_N_3	21.33
PF01242	PTPS	16.67
PF12172	DUF35_N	10.00
PF07690	MFS_1	4.67
PF02036	SCP2	3.33
PF01593	Amino_oxidase	2.67
PF02798	GST_N	2.00
PF12681	Glyoxalase_2	1.33
PF07110	EthD	0.67
PF10041	DUF2277	0.67
PF00067	p450	0.67
PF01467	CTP_transf_like	0.67
PF08659	KR	0.67
PF03352	Adenine_glyco	0.67
PF13249	SQHop_cyclase_N	0.67
PF02913	FAD-oxidase_C	0.67
PF00884	Sulfatase	0.67
PF00494	SQS_PSY	0.67
PF02515	CoA_transf_3	0.67
PF01323	DSBA	0.67
PF05992	SbmA_BacA	0.67
PF03473	MOSC	0.67
PF00561	Abhydrolase_1	0.67
PF00903	Glyoxalase	0.67
PF13410	GST_C_2	0.67
PF03795	YCII	0.67
PF04248	NTP_transf_9	0.67
PF08223	PaaX_C	0.67
PF02604	PhdYeFM_antitox	0.67
PF01796	OB_aCoA_assoc	0.67
PF00106	adh_short	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	16.67
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.67
COG1545	Uncharacterized OB-fold protein, contains Zn-ribbon domain	General function prediction only [R]	0.67
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.67
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.67
COG2124	Cytochrome P450	Defense mechanisms [V]	0.67
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.67
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.67
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.67
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.67
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.67
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.67 %
Unclassified	root	N/A	7.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.67 %
Unclassified	root	N/A	7.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.67 %
Unclassified	root	N/A	7.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.00 %
Unclassified	root	N/A	7.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.33 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	57.33 %
Unclassified	root	N/A	7.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	57.33 %
Unclassified	root	N/A	7.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	57.33 %
Unclassified	root	N/A	7.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.33 %
Unclassified	root	N/A	7.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10145834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300002908\|JGI25382J43887_10392609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300003994\|Ga0055435_10257947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300004157\|Ga0062590_100847136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	848	Open in IMG/M
3300004480\|Ga0062592_100432487	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005166\|Ga0066674_10009191	All Organisms → cellular organisms → Bacteria	4035	Open in IMG/M
3300005167\|Ga0066672_10391608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300005171\|Ga0066677_10004382	All Organisms → cellular organisms → Bacteria	5600	Open in IMG/M
3300005171\|Ga0066677_10299725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300005177\|Ga0066690_10096147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1896	Open in IMG/M
3300005186\|Ga0066676_11180805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300005187\|Ga0066675_11201123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300005332\|Ga0066388_100767750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1561	Open in IMG/M
3300005332\|Ga0066388_103704839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300005332\|Ga0066388_106927055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300005332\|Ga0066388_107810438	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005345\|Ga0070692_10743380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300005445\|Ga0070708_100512021	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300005450\|Ga0066682_10099041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1829	Open in IMG/M
3300005467\|Ga0070706_100399751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1279	Open in IMG/M
3300005467\|Ga0070706_100785307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	882	Open in IMG/M
3300005468\|Ga0070707_100065613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3487	Open in IMG/M
3300005518\|Ga0070699_100077497	All Organisms → cellular organisms → Bacteria → Proteobacteria	2894	Open in IMG/M
3300005518\|Ga0070699_101781503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300005529\|Ga0070741_10009392	All Organisms → cellular organisms → Bacteria	19031	Open in IMG/M
3300005533\|Ga0070734_10000366	All Organisms → cellular organisms → Bacteria	102187	Open in IMG/M
3300005536\|Ga0070697_100765880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	853	Open in IMG/M
3300005540\|Ga0066697_10763886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300005549\|Ga0070704_100320144	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300005553\|Ga0066695_10138038	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300005555\|Ga0066692_10128424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1536	Open in IMG/M
3300005557\|Ga0066704_10304066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300005557\|Ga0066704_10527695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	773	Open in IMG/M
3300005560\|Ga0066670_10153399	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300005561\|Ga0066699_10356894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300005566\|Ga0066693_10051912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1372	Open in IMG/M
3300005568\|Ga0066703_10773656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300005569\|Ga0066705_10157192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1400	Open in IMG/M
3300005569\|Ga0066705_10938873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300005586\|Ga0066691_10141807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300005598\|Ga0066706_10168637	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300005713\|Ga0066905_100213827	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005713\|Ga0066905_102033303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005764\|Ga0066903_103651210	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005764\|Ga0066903_105455124	Not Available	671	Open in IMG/M
3300006031\|Ga0066651_10073279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1664	Open in IMG/M
3300006032\|Ga0066696_10059434	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300006796\|Ga0066665_10023660	All Organisms → cellular organisms → Bacteria	3907	Open in IMG/M
3300006871\|Ga0075434_100483842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1259	Open in IMG/M
3300009012\|Ga0066710_100550447	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300009012\|Ga0066710_100969105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300009090\|Ga0099827_10386457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1195	Open in IMG/M
3300009137\|Ga0066709_102440436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300009137\|Ga0066709_103733379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300009137\|Ga0066709_103910548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300009792\|Ga0126374_11826229	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010047\|Ga0126382_11952573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300010047\|Ga0126382_12520789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300010048\|Ga0126373_11070750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	872	Open in IMG/M
3300010303\|Ga0134082_10133960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300010304\|Ga0134088_10132223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1183	Open in IMG/M
3300010321\|Ga0134067_10285417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300010323\|Ga0134086_10168751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300010360\|Ga0126372_12246454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300010361\|Ga0126378_12683871	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010376\|Ga0126381_103624422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300010397\|Ga0134124_10875202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	903	Open in IMG/M
3300010398\|Ga0126383_11124581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300010398\|Ga0126383_11272728	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300010398\|Ga0126383_13200714	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010400\|Ga0134122_13415435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300011271\|Ga0137393_11037652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300012189\|Ga0137388_11390192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300012203\|Ga0137399_10742071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300012211\|Ga0137377_10144635	All Organisms → cellular organisms → Bacteria → Proteobacteria	2275	Open in IMG/M
3300012285\|Ga0137370_11051071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300012359\|Ga0137385_10312729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1350	Open in IMG/M
3300012390\|Ga0134054_1077731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300012398\|Ga0134051_1243938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300012582\|Ga0137358_11060272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300012929\|Ga0137404_10457748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1133	Open in IMG/M
3300012976\|Ga0134076_10396035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300014154\|Ga0134075_10263607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300014157\|Ga0134078_10312672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300015241\|Ga0137418_10275300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1417	Open in IMG/M
3300015245\|Ga0137409_11374431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300015357\|Ga0134072_10395033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300015358\|Ga0134089_10517366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300015371\|Ga0132258_10186242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5022	Open in IMG/M
3300015374\|Ga0132255_103266222	Not Available	691	Open in IMG/M
3300016445\|Ga0182038_10131880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1876	Open in IMG/M
3300017659\|Ga0134083_10046483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1624	Open in IMG/M
3300017659\|Ga0134083_10059271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1455	Open in IMG/M
3300017659\|Ga0134083_10259747	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300018058\|Ga0187766_10047176	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300018060\|Ga0187765_10160926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1273	Open in IMG/M
3300018431\|Ga0066655_10017820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3250	Open in IMG/M
3300018431\|Ga0066655_11282742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300018468\|Ga0066662_10806558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	911	Open in IMG/M
3300018482\|Ga0066669_10371323	Not Available	1198	Open in IMG/M
3300018482\|Ga0066669_10413035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1147	Open in IMG/M
3300020583\|Ga0210401_11537897	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300021478\|Ga0210402_11009826	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300025823\|Ga0210123_1206903	Not Available	565	Open in IMG/M
3300025922\|Ga0207646_11102950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300025922\|Ga0207646_11422261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300026075\|Ga0207708_11107550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300026307\|Ga0209469_1074840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1023	Open in IMG/M
3300026307\|Ga0209469_1153006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300026315\|Ga0209686_1002953	All Organisms → cellular organisms → Bacteria	7876	Open in IMG/M
3300026324\|Ga0209470_1026131	All Organisms → cellular organisms → Bacteria	3063	Open in IMG/M
3300026324\|Ga0209470_1264094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300026326\|Ga0209801_1117981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1139	Open in IMG/M
3300026326\|Ga0209801_1336178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300026327\|Ga0209266_1263410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300026331\|Ga0209267_1003515	All Organisms → cellular organisms → Bacteria	9743	Open in IMG/M
3300026332\|Ga0209803_1175399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300026334\|Ga0209377_1138094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	947	Open in IMG/M
3300026523\|Ga0209808_1168559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300026529\|Ga0209806_1176120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300026540\|Ga0209376_1375897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300026547\|Ga0209156_10221633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300026548\|Ga0209161_10050201	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300026550\|Ga0209474_10406834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300027748\|Ga0209689_1200324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300027826\|Ga0209060_10000361	All Organisms → cellular organisms → Bacteria	90938	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10305562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300031563\|Ga0307436_1130106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300031713\|Ga0318496_10406162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300031720\|Ga0307469_10356234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300031748\|Ga0318492_10032795	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300031770\|Ga0318521_10971223	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031823\|Ga0307478_10917540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300031890\|Ga0306925_10091159	All Organisms → cellular organisms → Bacteria	3236	Open in IMG/M
3300031947\|Ga0310909_10527105	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300032041\|Ga0318549_10376612	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300032144\|Ga0315910_10062828	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300032144\|Ga0315910_10814817	Not Available	726	Open in IMG/M
3300032174\|Ga0307470_11758474	Not Available	524	Open in IMG/M
3300032180\|Ga0307471_100080579	All Organisms → cellular organisms → Bacteria	2862	Open in IMG/M
3300032180\|Ga0307471_101067286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300032180\|Ga0307471_104076730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300032205\|Ga0307472_101883267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300033289\|Ga0310914_10196754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1799	Open in IMG/M
3300033481\|Ga0316600_11355623	Not Available	506	Open in IMG/M
3300033502\|Ga0326731_1056610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	916	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.00%
Engineered	Engineered	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.67%
Plants	Host-Associated → Plants	4.00%
Aquatic	Environmental → Aquatic	2.67%
Wastewater	Engineered → Wastewater	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.67%
Marine	Environmental → Aquatic → Marine	2.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.33%
Freshwater	Environmental → Aquatic → Freshwater	0.67%
Peat	Environmental → Terrestrial → Peat	0.67%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.33%
Lake	Environmental → Aquatic → Freshwater → Lake	0.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.67%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.67%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.67%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.67%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025823	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300031563	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-40	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_101458341	3300002560	Grasslands Soil	AMWKVQMGRMREEFVRRGMPWLAPDEERALLDYLAAHAGSS*
JGI25382J43887_103926092	3300002908	Grasslands Soil	GCHGLNAPGSMTFPMWQVQLERMRGLFAQRGLPWLDAREERALLDYLAAHAGTS*
Ga0055435_102579471	3300003994	Natural And Restored Wetlands	CHRLYAPGAMTSAMWDLQLGRMRGLYAQRGIPWLPPAEEQALRDYLARHAGTQ*
Ga0062590_1008471362	3300004157	Soil	GGCHRLYAPSSMTIAMWDLQLGRMRGLFAQRGIPWLSPAEEQALRDYLAAHAGTQ*
Ga0062592_1004324873	3300004480	Soil	HRLYAPSSMTIAMWDLQLGRMRGLFAQRGIPWLSPAEEQALRDYLAAHAGTQ*
Ga0066674_100091912	3300005166	Soil	MTWPMWQVQVDRMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066672_103916082	3300005167	Soil	MTWPMWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAGTS*
Ga0066677_100043825	3300005171	Soil	MTFPMWQAQIERMHGLFAQRGLPWLSAHEERELLDYLAAHAGTS*
Ga0066677_102997252	3300005171	Soil	MTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066690_100961472	3300005177	Soil	VVFRARCAGCHRLSAPASMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066676_111808052	3300005186	Soil	MTSEMWQVQIARMRSLFAQRSVRWLTPAEERVVLDYLVAHAGTS*
Ga0066675_112011231	3300005187	Soil	MWKVQTGRMREEFARRGMPWLTPDEEHALLDYLAAHAGRS*
Ga0066388_1007677502	3300005332	Tropical Forest Soil	MTADMWRYQVDRMRALFAQRGLSWLPPGDERALLDYLTAHAGTS*
Ga0066388_1037048391	3300005332	Tropical Forest Soil	MTLEMWKVQIARMHLEFNRRGVPWLTSAEEQALMTYLAAHAGTS*
Ga0066388_1069270551	3300005332	Tropical Forest Soil	MTIAMWKMQLERMKALFADRGIPWLSPGDERALLDYLAAHAGTS*
Ga0066388_1078104381	3300005332	Tropical Forest Soil	MTAEMWRFQVGRMRGLFAERGIPWLAPGDERALLDYLTAHAGSS*
Ga0070692_107433802	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTLEMWRFQVDRMREQFARRGLPWLTAEEQSALMDYLAAHAGKS*
Ga0070708_1005120211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTAEMWTLQVARMRGEFARRGLPWLGTAEEQALLDYLAAHAGTS*
Ga0066682_100990413	3300005450	Soil	LNAPGSMTFPMWQVQIERMHGLFAQRGLPWLSAHEERELLDYLAAHAGTS*
Ga0070706_1003997513	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MWEVQIARMRDLFAQRGVPWLTPAEERALRDYLAAHAGSS*
Ga0070706_1007853072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GSMTLAMWQVQLGRMREEFARRGMPWLAPDEERALLEYLASHAGTS*
Ga0070707_1000656131	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LYAPGSMTLAMWQVQLGRMHEEFARRGVPWLAPDEERALLDYLGVHAGTS*
Ga0070699_1000774974	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTAEMWTLQVARMRGEFARRGLPWLGTDEERALLDYLAAHAGTT*
Ga0070699_1017815031	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SMTLAMWQVQLGRMREEFARRGMPWLAPDEERALLEYLASHAGTS*
Ga0070741_100093928	3300005529	Surface Soil	MTLEMWKVQIARMHEEFARRGVPWLAADEEAALLDYLTAHAGTS*
Ga0070734_10000366107	3300005533	Surface Soil	MTAAMWRLQVARMRAPFAQRGLPWLTPAEEQALLDYLTAHAGTR*
Ga0070697_1007658801	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLQQRCASCHRIPAPGSMTYEMWRVQLERMRGLYAQRGLPWLTATEEDALRAYLQVHAGES*
Ga0066697_107638862	3300005540	Soil	MTSEMWQVQIARMRSLFAQRSVPWLTPAEERVVLDYLVAHAGTS*
Ga0070704_1003201441	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTLEMWKVQVDRMHAEFVRRGVPWLAPDEERALLDYLGAHAGTG*
Ga0066695_101380384	3300005553	Soil	VERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066692_101284242	3300005555	Soil	VVFRARCAGCHRLSAPASMTWPMWQVQVDRMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066704_103040662	3300005557	Soil	GRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0066704_105276952	3300005557	Soil	MWKVQTGRMREEFARRGMPWLVPDEERALLDYLAAHAGRS*
Ga0066670_101533991	3300005560	Soil	MTWPMWQVQVDRMRALFAQRGLSWLSADEERETRAYLAAHAGTS*
Ga0066699_103568942	3300005561	Soil	MTFPMWQVQLERMRGLFAQRGLPWLDAREERALLDYLAAHAGRS*
Ga0066693_100519123	3300005566	Soil	TLAMWKVQIGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0066703_107736561	3300005568	Soil	TLAMWKVQIGRMREEFARRGMPWLAPDEERALLDYLAAHAGGS*
Ga0066705_101571924	3300005569	Soil	MWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066705_109388731	3300005569	Soil	YAPGSMTFPMWQAQIERMHGLFAQRRLPWLSAHEERELLDYLAAHAGTS*
Ga0066691_101418072	3300005586	Soil	VVFRARCAGCHRLSAPASMTWPMWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAGTS*
Ga0066706_101686373	3300005598	Soil	GSMTLAMWKVQTGRMREEFARRGMPWLTPDEEHALLDYLAAHAGRS*
Ga0066905_1002138272	3300005713	Tropical Forest Soil	MTIAMWKMQLERMKALFAERGIPWLSPGDERALLDYLAAHAGTS*
Ga0066905_1020333032	3300005713	Tropical Forest Soil	MTAEMWNVQIERMRALFASRGIPWLTRDDEAALRAY
Ga0066903_1036512102	3300005764	Tropical Forest Soil	MTIAMWKMQLERMKALFAERGIPWLSPGDERALLDYLTAHAGTS*
Ga0066903_1054551241	3300005764	Tropical Forest Soil	QVERMRALFAQRGIPWLAPGDERVLLDYLTAHAGGS*
Ga0066651_100732793	3300006031	Soil	MWQVQVERMRALIAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0066696_100594342	3300006032	Soil	VVFRARCAGCHRLSAPASMTWPMWQVQVERMRALFAQRGLPWLSADEERELREYLAAHAGTS*
Ga0066665_100236601	3300006796	Soil	PMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0075433_102157471	3300006852	Populus Rhizosphere	MTADMWKFQVARMQGLFAQRGIPPLTTDEERLLMEYLTAHAGTS
Ga0075425_1001561403	3300006854	Populus Rhizosphere	MTADMWKFQVARMQGLFAQRGIPPLTADEERMLMEYLTAHAGTS*
Ga0075434_1004838423	3300006871	Populus Rhizosphere	MTADMWKVQVARMQGLFAQRGIPRLTADEERELMEYLAAHAGT
Ga0075424_1001082415	3300006904	Populus Rhizosphere	MTADMWKFQVARMQGLFAQRGIPPLTTDEERLLMEYLTAHAGTS*
Ga0066710_1005504471	3300009012	Grasslands Soil	RLYAPGSMTLAMWKVQTGRMREEFARRGMPWLTPDEERALLDYLAAHAGRS
Ga0066710_1009691053	3300009012	Grasslands Soil	MTLAMWKLQLDRMRALFARRGMPWLTPEEERALQDYLAAHAGTT
Ga0099827_103864572	3300009090	Vadose Zone Soil	MTWPMWQVQVDRMRALFAQRALPWLSADEERDLRAYLAAHAGTS*
Ga0066709_1024404362	3300009137	Grasslands Soil	EMWNLQVARMRALFARRGIPWLTPEEERALQDYLVAHAGTA*
Ga0066709_1037333792	3300009137	Grasslands Soil	MTLAMWKLQLDRMRALFARRGIPWITPEEERALQDYLAAHA
Ga0066709_1039105481	3300009137	Grasslands Soil	DRMRALFARRGMPWLTPEEERALQDYLAAHAGTT*
Ga0126374_118262291	3300009792	Tropical Forest Soil	HRVYAPGSMTAEMWRFQVGRMRGLFAERGIPWLAPGDERALLDYLVAHAGSS*
Ga0131092_105559732	3300009870	Activated Sludge	MTAEMWAFQVPRMQERFRQRGMPWLTADEQRQLLEYLTAHAGSG*
Ga0126382_119525731	3300010047	Tropical Forest Soil	EQVARMQALFAQRGIPALPPDEERVLLEYLTAHAGTS*
Ga0126382_125207892	3300010047	Tropical Forest Soil	MTAEMWNVQIERMRALFASRGIPWLTPDDEAALRAYVRDHAGTV*
Ga0126373_110707502	3300010048	Tropical Forest Soil	MTAEMWRFQVGRMRGLFAERGIPWLAPGDERALLDYLVAHAGSS*
Ga0134082_101339602	3300010303	Grasslands Soil	MWQVQVERMRALFAQRGLPWLSADEERDLRAYLAAHAGTS*
Ga0134088_101322231	3300010304	Grasslands Soil	GCHRLYAPGSMTFPMWQVQIERMHGLFAQRRLPWLSAHEERELLDYLAAHAGTS*
Ga0134067_102854172	3300010321	Grasslands Soil	MTFPMWQAQIERMHGLFAQRRLPWLSAHEERELLDYLAAHAGTS*
Ga0134086_101687511	3300010323	Grasslands Soil	APGSMTLAMWKVQIGRMREEFARRGMPWLVPDEERALLDYLAAHAGRS*
Ga0126372_122464541	3300010360	Tropical Forest Soil	MTIAMWQFQVERMRGEFAKRGMPWLTTREESALLEYLAAHAGKG*
Ga0126378_126838712	3300010361	Tropical Forest Soil	KVQLDRMRGLFAKRGIPWLSPDDEHALLDYLQAHAGTS*
Ga0126381_1036244222	3300010376	Tropical Forest Soil	MTVATWRFQVGRMRELFAQRGLPWLTAEEERQLLDYLAAHAGTS*
Ga0134124_108752022	3300010397	Terrestrial Soil	DRMHAEFVRRGVPWLAPDEERALLDYLGAHAGTG*
Ga0126383_111245812	3300010398	Tropical Forest Soil	MTAEMWNVQLERMRALFASRGLPWLAPDDEAALRAYLREHAGTV*
Ga0126383_112727281	3300010398	Tropical Forest Soil	MTAEMWRFQVGRMRALFADRGLPWLAAGDERALLEYLTAHAGTS*
Ga0126383_132007142	3300010398	Tropical Forest Soil	QLERMKALFAERGIPWLSPGDERALLEYLAAHAGTS*
Ga0134122_134154351	3300010400	Terrestrial Soil	PATMTLEMWRFQVDRMREQFARRGLPWLTAEEQSALMDYLAAHAGTS*
Ga0137393_110376521	3300011271	Vadose Zone Soil	LYAPGSMTLAMWQVQLGRMHEEFARRGMPWLAPDEERALLDYLGAHAGTS*
Ga0137388_113901922	3300012189	Vadose Zone Soil	MTWPMWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAG
Ga0137399_107420711	3300012203	Vadose Zone Soil	MWELQLGRMRELFARRGIPWLTSEEERALLDYLRAHAGTS*
Ga0137377_101446354	3300012211	Vadose Zone Soil	PDSMTLAMWKVQIGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0137370_110510711	3300012285	Vadose Zone Soil	IGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0137385_103127293	3300012359	Vadose Zone Soil	HQLYAPGSMTLAMWKVQIGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0134054_10777311	3300012390	Grasslands Soil	GSMTAEMWNVQVAKMHEEFARRGMPWLEKDEEQALLQYLHDHAGQS*
Ga0134051_12439382	3300012398	Grasslands Soil	KVQTGRMREEFARRGMPWLVPDEERALLDYLVAHAGRS*
Ga0137358_110602722	3300012582	Vadose Zone Soil	EMWKVQTGRMREEFTRRGMPWLVPDEERALLDYLAAHAGRS*
Ga0137404_104577482	3300012929	Vadose Zone Soil	MTAEMWQVQIARMRGLFAQRGIPWLTPAEERILLDYLAAHAGTS*
Ga0134076_103960351	3300012976	Grasslands Soil	EMWKVQTGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS*
Ga0134075_102636072	3300014154	Grasslands Soil	MTWPMWQVQVERMRALFAQRGLPWLSADEERDLRAYLAAHAGTS*
Ga0134078_103126722	3300014157	Grasslands Soil	MTFPMWQVQLERMRGLFAQRGLPWLDAREERALLDYLAAHAGTS*
Ga0137418_102753001	3300015241	Vadose Zone Soil	MWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAGTS*
Ga0137409_113744312	3300015245	Vadose Zone Soil	WKVQIGRMREEFARRGMPWLVPDEERALLDYLAAHAGRS*
Ga0134072_103950332	3300015357	Grasslands Soil	PASMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS*
Ga0134089_105173662	3300015358	Grasslands Soil	LYAPGSMTLAMWKVQIGRMREEFARRGMPWLVPDEERALLDYLAAHAGRS*
Ga0132258_101862425	3300015371	Arabidopsis Rhizosphere	MTPDMWRYQVDRMRTLFAQRGIPWLAPDEERALLDYVTSHAGAS*
Ga0132255_1032662222	3300015374	Arabidopsis Rhizosphere	YQVDRMRGLFAQRGIPWLAPGDERALLDYVTSHAGSS*
Ga0182038_101318801	3300016445	Soil	QLGRMRGLYAQRGIPWLSSDDEHALLDYLQAHAGTS
Ga0134083_100464831	3300017659	Grasslands Soil	KVQIGRMREEFARRGMPWLAADEERALLDYLAAHAGRS
Ga0134083_100592711	3300017659	Grasslands Soil	APGSMTFPMWQAQIERMHGLFAQRRLPWLSAHEERELLDYLAAHAGTS
Ga0134083_102597472	3300017659	Grasslands Soil	MTFPMWQVQVERMHGLFAQRGLPWLSAHEERELLDYLASHALAS
Ga0187766_100471763	3300018058	Tropical Peatland	MTFEMWKLQVARMQGEFSRRGLPWLTPAEEHALLDYLAAHAGTS
Ga0187765_101609262	3300018060	Tropical Peatland	MTIAMWEVQLERMRDVFARRGIPWLMPAEEQALREYLAAHAGGS
Ga0066655_100178203	3300018431	Grasslands Soil	MTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0066655_112827422	3300018431	Grasslands Soil	MWKVQIGRMREEFARRGMPWLAPDEERALLDYLAAHAGRS
Ga0066662_108065581	3300018468	Grasslands Soil	MKWPMWKVQVERMRALCAQRGIPWLSADEERELRAYLAAHAGTS
Ga0066669_103713234	3300018482	Grasslands Soil	GCHRLYAPASMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0066669_104130352	3300018482	Grasslands Soil	MTSEMWKVQVGRMRELFARRGVPWLAPDEERALLEYLATHAGAS
Ga0210401_115378972	3300020583	Soil	GGCHRVDAPGSMTFEMWKVQLAQMRVLFAKRGIPWLSSDDEQALLDYLQAHAGTS
Ga0210402_110098261	3300021478	Soil	GGCHRVDAPGSMTFEMWKVQLAQMRVLFAKRGIPWLSSDDEHALLDYLQAHAGTS
Ga0210123_12069031	3300025823	Natural And Restored Wetlands	VHAPGTMTFEMWKMQLTRMRVLFAQRGIPWLTDVEEQALLRYLERHAGTQ
Ga0207646_111029502	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLEMWRLQIGRMHELFARREIPWLAPDEERALLDYLGAHAGTG
Ga0207646_114222612	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTAEMWTLQVARMRGEFARRGLPWLGTAEEQALLDYLAAHAGTS
Ga0207708_111075502	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SMTLETWRFQVDRMREQFARRGLPWLTAEEQSALMDYLAAHAGKS
Ga0209469_10748402	3300026307	Soil	MTWPMWQVQVDRMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0209469_11530061	3300026307	Soil	PGSMTLAMWKVQIGRMREEFARRGMPWLVPDEERALLDYLAAHAGRS
Ga0209686_10029535	3300026315	Soil	MTFPMWQAQIERMHGLFAQRGLPWLSAHEERELLDYLAAHAGTS
Ga0209470_10261315	3300026324	Soil	SMTLEMWKVQTGRMREEFARRGMPWLVPDEERALLDYLVAHAGRS
Ga0209470_12640941	3300026324	Soil	VFRARCAGCHRLSAPASMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGT
Ga0209801_11179813	3300026326	Soil	MWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0209801_13361782	3300026326	Soil	HRLYAPDSMTLAMWKVQIGRMREEFTRRGMPWLAPDEERTLLDYLAAHAGRS
Ga0209266_12634102	3300026327	Soil	SMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0209267_10035158	3300026331	Soil	MTFPMWQAQIERMHGLFAQRRLPWLSAHEERELLDYLAAHAGTS
Ga0209803_11753992	3300026332	Soil	PMWQVQIERMHGLFAQRGLPWLSAHEERELLDYLAAHAGTS
Ga0209377_11380942	3300026334	Soil	RLYAPGSMTLAMWKVQIGRMREEFARRGMPWLAPDEERALLDYLGAHAGRS
Ga0209808_11685592	3300026523	Soil	TLEMWKVQTGRMREEFARRGMPWLVPDEERALLDYLVAHAGRS
Ga0209806_11761203	3300026529	Soil	SMTLAMWKVQIGRMREEFTRRGMPWLAPDEERTLLDYLAAHAGRS
Ga0209376_13758971	3300026540	Soil	APASMTWPMWQVQVERMRALFAQRGLPWLSADEERELRAYLAAHAGTS
Ga0209156_102216332	3300026547	Soil	MTWPMWQVQVERMRALFAQRGLPWLSADEERELREYLAAHAGTS
Ga0209161_100502011	3300026548	Soil	GSMTLAMWKVQTGRMREEFARRGMPWLTPDEEHALLDYLAAHAGRS
Ga0209474_104068341	3300026550	Soil	VFRARCAGCRRLYAPASMTWPMWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAGT
Ga0209689_12003242	3300027748	Soil	MTWPMWQVQVDRMRALFAQRGLPWLSADEERDLRAYLAAHAGTS
Ga0209060_100003612	3300027826	Surface Soil	MTAAMWRLQVARMRAPFAQRGLPWLTPAEEQALLDYLTAHAGTR
(restricted) Ga0233417_103055621	3300028043	Sediment	TMTLAMWDVQLGRMRGLYAQRGIPWLSPDEEQALRDYLAKHAGTQ
Ga0307436_11301061	3300031563	Salt Marsh	APGSMTFAMWQVQLDRMRRLYAQRGIPWLRPDEERALLAYLRAHAGTQ
Ga0318496_104061621	3300031713	Soil	MTFEMWKAQLARMRGLYARRGIPWLSSDDERALLDYLQ
Ga0307469_103562342	3300031720	Hardwood Forest Soil	MWKFQVSRMHDLFAHRGLPWLTPDEERALLDYLAAHAGTS
Ga0318492_100327953	3300031748	Soil	APESMTFEMWKAQLGRMRGLYAQRGIPWLSSDDEHALLDYLQAHAGTS
Ga0318521_109712231	3300031770	Soil	MWKAQLVNMRVLFAKRGIPWLSSDDEHALLDYLQAHAGTS
Ga0307478_109175401	3300031823	Hardwood Forest Soil	MTIETWRFQLGRMRELFAQRGIPWLTPEEEHALTDYLAAHAG
Ga0306925_100911593	3300031890	Soil	PGSMTFEMWKAQLGRMRGLYAQRGIPWLSSDDERALLDYLQAHAGTS
Ga0310909_105271052	3300031947	Soil	EMWKAQLVNMRVLFAKRGIPWLSSDDEHALLDYLQAHAGTS
Ga0318549_103766122	3300032041	Soil	YAPGSMTFEMWKVQLVNMRVLFAKRGIPWLSSDDEHALLDYLQAHASTS
Ga0315910_100628281	3300032144	Soil	MTLAMWDVQLARMHALFQQRGIPWLSPPEEQALRDYLA
Ga0315910_108148172	3300032144	Soil	HRLYTPSSMTLAMWDVQLARMHALFQQRGIPWLSPPEEQALRDYLAKYAGTQ
Ga0307470_117584742	3300032174	Hardwood Forest Soil	MWKVQIARMHVEFTRRGMPWLTSAEEQALMTYLVAHAGTS
Ga0307471_1000805794	3300032180	Hardwood Forest Soil	MTLAMWKVQIERMRPLFAQRGMPWLAPDEERALLDYLAAHAGAS
Ga0307471_1010672862	3300032180	Hardwood Forest Soil	MWQVQVDRMRAMFGQRGLPWLSADEDRELREYLASHAGTS
Ga0307471_1040767301	3300032180	Hardwood Forest Soil	DAPGAVVLRTRCAGCHGLNAPGSMTFPMWQVQLERMRGLFAQRGLPWLDAREERALLDYLAAHAGRS
Ga0307472_1018832672	3300032205	Hardwood Forest Soil	MTFPMWQVQLERMRGLFARRGLPWLDARDERALLDYLAAHAGTS
Ga0310914_101967541	3300033289	Soil	RVYGPGSMTFEMWKAQLGRMRGLYAQRGIPWLSSDDEHALLDYLQAHAGTS
Ga0316600_113556231	3300033481	Soil	AMWEMQLGRMRSLFAQRGIPWLPPAEERTLRDYLAKHAGTQ
Ga0326731_10566102	3300033502	Peat Soil	MTLEMWKMQLGRMQALFAERGIPWLSPGDERALLDYLTAHAGTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters