NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F046721

Metagenome / Metatranscriptome Family F046721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046721
Family Type Metagenome / Metatranscriptome
Number of Sequences 151
Average Sequence Length 37 residues
Representative Sequence NQMSWIKNLINRIKLEIRYRKKLKELRKRDPFIYK
Number of Associated Samples 129
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 32.21 %
% of genes near scaffold ends (potentially truncated) 63.58 %
% of genes from short scaffolds (< 2000 bps) 76.82 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (43.709 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(10.596 % of family members)
Environment Ontology (ENVO) Unclassified
(32.450 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(46.358 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.79%    β-sheet: 0.00%    Coil/Unstructured: 49.21%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 150 Family Scaffolds
PF02543Carbam_trans_N 35.33
PF02772S-AdoMet_synt_M 7.33
PF16861Carbam_trans_C 7.33
PF00970FAD_binding_6 5.33
PF00438S-AdoMet_synt_N 4.00
PF07460NUMOD3 2.00
PF08241Methyltransf_11 1.33
PF01583APS_kinase 1.33
PF02773S-AdoMet_synt_C 1.33
PF01883FeS_assembly_P 1.33
PF13186SPASM 1.33
PF06945DUF1289 1.33
PF04055Radical_SAM 1.33
PF02769AIRS_C 0.67
PF13733Glyco_transf_7N 0.67
PF02310B12-binding 0.67
PF13394Fer4_14 0.67
PF03721UDPG_MGDP_dh_N 0.67
PF07068Gp23 0.67
PF01467CTP_transf_like 0.67
PF01048PNP_UDP_1 0.67
PF13385Laminin_G_3 0.67
PF08030NAD_binding_6 0.67
PF16363GDP_Man_Dehyd 0.67
PF01041DegT_DnrJ_EryC1 0.67
PF13472Lipase_GDSL_2 0.67
PF13847Methyltransf_31 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 150 Family Scaffolds
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 35.33
COG0192S-adenosylmethionine synthetaseCoenzyme transport and metabolism [H] 12.67
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 1.33
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 1.33
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.67
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.67
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.67
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.67
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.67
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.67
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.67
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.67
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.67
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.67
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.67
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.67
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.67
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.67


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.29 %
UnclassifiedrootN/A43.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10030622All Organisms → cellular organisms → Bacteria2965Open in IMG/M
3300000553|TBL_comb47_HYPODRAFT_10051426Not Available2498Open in IMG/M
3300001392|Lau_10083235All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6861Open in IMG/M
3300001392|Lau_10132950All Organisms → cellular organisms → Bacteria1709Open in IMG/M
3300001419|JGI11705J14877_10022908Not Available2458Open in IMG/M
3300001460|JGI24003J15210_10006933All Organisms → cellular organisms → Bacteria → Proteobacteria4760Open in IMG/M
3300001460|JGI24003J15210_10009888All Organisms → Viruses → Predicted Viral3891Open in IMG/M
3300001460|JGI24003J15210_10016744All Organisms → Viruses → Predicted Viral2857Open in IMG/M
3300001460|JGI24003J15210_10166749Not Available547Open in IMG/M
3300001472|JGI24004J15324_10151252All Organisms → cellular organisms → Bacteria → Proteobacteria536Open in IMG/M
3300001850|RCM37_1057593All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage504Open in IMG/M
3300002201|metazooDRAFT_1267539All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage706Open in IMG/M
3300002202|metazooDRAFT_1258293Not Available667Open in IMG/M
3300003498|JGI26239J51126_1052448Not Available762Open in IMG/M
3300004097|Ga0055584_101231232Not Available780Open in IMG/M
3300004805|Ga0007792_10080748Not Available989Open in IMG/M
3300005512|Ga0074648_1023363All Organisms → cellular organisms → Bacteria → Proteobacteria3356Open in IMG/M
3300005512|Ga0074648_1037780All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2294Open in IMG/M
3300005580|Ga0049083_10146403Not Available811Open in IMG/M
3300005582|Ga0049080_10077591Not Available1137Open in IMG/M
3300005805|Ga0079957_1005762All Organisms → cellular organisms → Bacteria10023Open in IMG/M
3300005913|Ga0075108_10018414All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2714Open in IMG/M
3300005913|Ga0075108_10094488All Organisms → cellular organisms → Bacteria → Proteobacteria1100Open in IMG/M
3300005933|Ga0075118_10087325All Organisms → cellular organisms → Bacteria → Proteobacteria1106Open in IMG/M
3300006100|Ga0007806_1082229All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage599Open in IMG/M
3300006115|Ga0007816_1036930All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1117Open in IMG/M
3300006120|Ga0007867_1029593Not Available1229Open in IMG/M
3300006637|Ga0075461_10243643All Organisms → cellular organisms → Bacteria → Proteobacteria529Open in IMG/M
3300006752|Ga0098048_1004407All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio → Bdellovibrio exovorus5535Open in IMG/M
3300006868|Ga0075481_10100254All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1076Open in IMG/M
3300006917|Ga0075472_10430939Not Available653Open in IMG/M
3300006921|Ga0098060_1000053Not Available57936Open in IMG/M
3300006990|Ga0098046_1115062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria591Open in IMG/M
3300007363|Ga0075458_10168872Not Available675Open in IMG/M
3300007542|Ga0099846_1098300Not Available1079Open in IMG/M
3300007609|Ga0102945_1002809All Organisms → cellular organisms → Bacteria4788Open in IMG/M
3300007609|Ga0102945_1050430Not Available814Open in IMG/M
3300008012|Ga0075480_10064571All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2112Open in IMG/M
3300008050|Ga0098052_1015464Not Available3789Open in IMG/M
3300008107|Ga0114340_1135073Not Available931Open in IMG/M
3300008267|Ga0114364_1093834All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage951Open in IMG/M
3300008267|Ga0114364_1108228Not Available851Open in IMG/M
3300008954|Ga0115650_1324393All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage794Open in IMG/M
3300009026|Ga0102829_1099765All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage905Open in IMG/M
3300009068|Ga0114973_10636513Not Available545Open in IMG/M
3300009071|Ga0115566_10000064Not Available79463Open in IMG/M
3300009071|Ga0115566_10005915Not Available9597Open in IMG/M
3300009071|Ga0115566_10569426All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage637Open in IMG/M
3300009149|Ga0114918_10414141All Organisms → cellular organisms → Bacteria → Proteobacteria732Open in IMG/M
3300009149|Ga0114918_10614250All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage574Open in IMG/M
3300009154|Ga0114963_10190826Not Available1191Open in IMG/M
3300009163|Ga0114970_10200714Not Available1173Open in IMG/M
3300009164|Ga0114975_10525643All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage636Open in IMG/M
3300009180|Ga0114979_10640839All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage605Open in IMG/M
3300009184|Ga0114976_10221417All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1035Open in IMG/M
3300009409|Ga0114993_10028173All Organisms → Viruses → Predicted Viral4598Open in IMG/M
3300009422|Ga0114998_10432585All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage615Open in IMG/M
3300009495|Ga0115571_1196415Not Available827Open in IMG/M
3300009502|Ga0114951_10287406All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300009507|Ga0115572_10462034All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium706Open in IMG/M
3300009508|Ga0115567_10626259All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage648Open in IMG/M
3300009508|Ga0115567_10754446All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300009526|Ga0115004_10498862All Organisms → cellular organisms → Bacteria → Proteobacteria720Open in IMG/M
3300009785|Ga0115001_10095024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1953Open in IMG/M
3300010334|Ga0136644_10331300All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage876Open in IMG/M
3300010354|Ga0129333_10059529All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3563Open in IMG/M
3300010354|Ga0129333_10274777Not Available1513Open in IMG/M
3300010354|Ga0129333_10436412All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon1155Open in IMG/M
3300010885|Ga0133913_10793754Not Available2468Open in IMG/M
3300010885|Ga0133913_12369249All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1300Open in IMG/M
3300010885|Ga0133913_12734539Not Available1192Open in IMG/M
3300010885|Ga0133913_12804113Not Available1173Open in IMG/M
3300011184|Ga0136709_1012003Not Available1223Open in IMG/M
3300012525|Ga0129353_1497411Not Available500Open in IMG/M
3300012525|Ga0129353_1497411Not Available500Open in IMG/M
3300013004|Ga0164293_10353446All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1002Open in IMG/M
3300013010|Ga0129327_10329539Not Available796Open in IMG/M
3300013094|Ga0164297_10013220Not Available5824Open in IMG/M
3300016737|Ga0182047_1521612All Organisms → cellular organisms → Bacteria → Proteobacteria780Open in IMG/M
3300016745|Ga0182093_1404511All Organisms → cellular organisms → Bacteria → Proteobacteria764Open in IMG/M
3300016747|Ga0182078_10957025Not Available1677Open in IMG/M
3300017697|Ga0180120_10177878All Organisms → cellular organisms → Bacteria → Proteobacteria891Open in IMG/M
3300017742|Ga0181399_1021522Not Available1798Open in IMG/M
3300017747|Ga0181352_1190330Not Available530Open in IMG/M
3300017752|Ga0181400_1001740All Organisms → cellular organisms → Bacteria → Proteobacteria8851Open in IMG/M
3300017768|Ga0187220_1120832Not Available792Open in IMG/M
3300017778|Ga0181349_1205613All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage678Open in IMG/M
3300017779|Ga0181395_1108918Not Available885Open in IMG/M
3300017780|Ga0181346_1222239All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage671Open in IMG/M
3300017950|Ga0181607_10242610Not Available1038Open in IMG/M
3300017951|Ga0181577_10515544Not Available746Open in IMG/M
3300017967|Ga0181590_11125908Not Available505Open in IMG/M
3300017969|Ga0181585_10178032All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1538Open in IMG/M
3300017986|Ga0181569_10625645All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage718Open in IMG/M
3300017989|Ga0180432_10835896Not Available636Open in IMG/M
3300017989|Ga0180432_11207681Not Available506Open in IMG/M
3300018041|Ga0181601_10659252Not Available531Open in IMG/M
3300018418|Ga0181567_10717339All Organisms → cellular organisms → Bacteria → Proteobacteria638Open in IMG/M
3300018428|Ga0181568_10735768Not Available768Open in IMG/M
3300020159|Ga0211734_11320190Not Available519Open in IMG/M
3300020160|Ga0211733_10989130Not Available1116Open in IMG/M
3300020162|Ga0211735_10373177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage715Open in IMG/M
3300020173|Ga0181602_10323882All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300020175|Ga0206124_10003621All Organisms → cellular organisms → Bacteria10776Open in IMG/M
3300020178|Ga0181599_1334073All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300020182|Ga0206129_10053119Not Available2512Open in IMG/M
3300020194|Ga0181597_10050486All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2615Open in IMG/M
3300020220|Ga0194119_10894709Not Available517Open in IMG/M
3300021354|Ga0194047_10018021All Organisms → cellular organisms → Bacteria3500Open in IMG/M
3300021519|Ga0194048_10102942Not Available1099Open in IMG/M
3300021519|Ga0194048_10155464All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium858Open in IMG/M
3300021958|Ga0222718_10375102All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium717Open in IMG/M
3300021962|Ga0222713_10319900All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage981Open in IMG/M
3300021963|Ga0222712_10412799All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage818Open in IMG/M
3300022407|Ga0181351_1088463Not Available1220Open in IMG/M
3300022921|Ga0255765_1086616All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1671Open in IMG/M
3300023119|Ga0255762_10364340Not Available725Open in IMG/M
3300023174|Ga0214921_10548088All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage533Open in IMG/M
3300023296|Ga0222664_1013362All Organisms → cellular organisms → Bacteria → Proteobacteria1823Open in IMG/M
3300024262|Ga0210003_1003317All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage13152Open in IMG/M
3300024262|Ga0210003_1357253All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300024293|Ga0228651_1105652Not Available636Open in IMG/M
3300024346|Ga0244775_11255122Not Available575Open in IMG/M
3300025091|Ga0209616_1007430Not Available1223Open in IMG/M
3300025396|Ga0208874_1024287All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage950Open in IMG/M
3300025467|Ga0208260_1101635Not Available564Open in IMG/M
3300025598|Ga0208379_1161690Not Available501Open in IMG/M
3300025603|Ga0208414_1042860All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300025680|Ga0209306_1182597Not Available580Open in IMG/M
3300025695|Ga0209653_1125631All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage789Open in IMG/M
3300025880|Ga0209534_10419592All Organisms → cellular organisms → Bacteria → Proteobacteria573Open in IMG/M
3300026138|Ga0209951_1003643All Organisms → Viruses → Predicted Viral3334Open in IMG/M
3300027747|Ga0209189_1064596Not Available1725Open in IMG/M
3300027782|Ga0209500_10284187All Organisms → cellular organisms → Bacteria → Proteobacteria707Open in IMG/M
3300027791|Ga0209830_10236051All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage836Open in IMG/M
(restricted) 3300027861|Ga0233415_10326209All Organisms → cellular organisms → Bacteria → Proteobacteria727Open in IMG/M
3300027899|Ga0209668_10706990All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage676Open in IMG/M
3300027971|Ga0209401_1307872Not Available547Open in IMG/M
3300028392|Ga0304729_1226903All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage569Open in IMG/M
(restricted) 3300028559|Ga0247831_1040980All Organisms → cellular organisms → Bacteria2576Open in IMG/M
(restricted) 3300029286|Ga0247841_10296418Not Available1116Open in IMG/M
3300031519|Ga0307488_10225698All Organisms → cellular organisms → Bacteria → Proteobacteria1251Open in IMG/M
3300031801|Ga0310121_10721074All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.527Open in IMG/M
3300031802|Ga0310123_10038546Not Available3385Open in IMG/M
3300031857|Ga0315909_10140665All Organisms → cellular organisms → Bacteria → Proteobacteria2006Open in IMG/M
3300031857|Ga0315909_10307793Not Available1181Open in IMG/M
3300034062|Ga0334995_0401923Not Available857Open in IMG/M
3300034082|Ga0335020_0017044All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4195Open in IMG/M
3300034104|Ga0335031_0708890All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage577Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh10.60%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake9.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine9.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.30%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.30%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.30%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater4.64%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.31%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.31%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake2.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.65%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface2.65%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.99%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.99%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.99%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.99%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake1.32%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.32%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.32%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.32%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.32%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.32%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume1.32%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.32%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.32%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.32%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater0.66%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.66%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.66%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.66%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.66%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.66%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.66%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.66%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.66%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.66%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.66%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.66%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.66%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.66%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.66%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000553Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)EnvironmentalOpen in IMG/M
3300001392ELSC MetagenomeEnvironmentalOpen in IMG/M
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001850Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2aEnvironmentalOpen in IMG/M
3300002201Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2013EnvironmentalOpen in IMG/M
3300002202Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2012EnvironmentalOpen in IMG/M
3300003498Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004805Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6MEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005933Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKEEnvironmentalOpen in IMG/M
3300006100Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09EnvironmentalOpen in IMG/M
3300006115Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09EnvironmentalOpen in IMG/M
3300006120Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008954Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7umEnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011184Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaGEnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300013094Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaGEnvironmentalOpen in IMG/M
3300016737Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300021354Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5mEnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300023119Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaGEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023296Saline water microbial communities from Ace Lake, Antarctica - #604EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025091Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025396Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)EnvironmentalOpen in IMG/M
3300025467Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025598Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300025603Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027747Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028392Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003062233300000101MarineMLVVKLIKSVINKIKMEIRYRKRLKELRKRDPFIYK*
TBL_comb47_HYPODRAFT_1005142613300000553FreshwaterKKETNMNWITNLYNRIRLELRYRKKLKELRKRDPFIYK*
Lau_1008323563300001392Black Smokers Hydrothermal PlumeVKNPIRTLWNKIKLEIRYRKKLKELKKRDPFIYK*
Lau_1013295023300001392Black Smokers Hydrothermal PlumeVKNPIKTLWNKIKLEIRYRKKLKELKKRDPFIYK*
JGI11705J14877_1002290813300001419Saline Water And SedimentSMNIFKKLWNKIKLEIRYRKKLKELRKRDPFIYK*
JGI24003J15210_1000693333300001460MarineMLVVKFIKRIINKIKMEIRYRKRLKELRKRDPFIYK*
JGI24003J15210_1000988863300001460MarineMITWIKSLIDKIKLEIRYRKKLKELRKRDPFIYK*
JGI24003J15210_1001674433300001460MarineMISWIQKIYYKIKLEIQYRKKLKELKKRDPFIYK*
JGI24003J15210_1016674923300001460MarineMITWIKNLINKVKLEIRYRKKLKELRKRDPFIYK*
JGI24004J15324_1015125223300001472MarineMLTWIKGIINKIKLEIRYRKKLKELRKRDPFIYK*
RCM37_105759313300001850Marine PlanktonMILWIKNLYARIKLEIVYRKKLKELRKRDPFIYK*
metazooDRAFT_126753923300002201LakeMLSWIRNLYNKIKLEINYRKKLKELRKRDPFIYK*
metazooDRAFT_125829313300002202LakePATKAFKMKWFKQIWNRITLEYRYRKKLKELRKRDPFIYK*
JGI26239J51126_105244823300003498MarineVILNLLSGGRIYPMQWIKNLINRIKMEIQYRKRLKELRKRDPFIYK*
Ga0055584_10123123223300004097Pelagic MarineMDGNRLMKWIRSLINRIKLELRYRKRLKELRKRDPFIYK*
Ga0007792_1008074823300004805FreshwaterTNKGTKMKWIRNLYNRITLELRYRKKLKELRKRDPFIYK*
Ga0074648_102336353300005512Saline Water And SedimentMVNWIKSIINKIKLEIRYRKRLKELRKRDPFIYK*
Ga0074648_103778023300005512Saline Water And SedimentMIKWVKNIVNKIKLEIRYRKKLKELRKRDPFIYK*
Ga0049083_1014640333300005580Freshwater LenticSSMNWLRKIYNRIKLEIAYRKKLKELRKRDPFIYK*
Ga0049080_1007759113300005582Freshwater LenticLHGETNQMSWIKRILDRVKLEIRYRKKLKELRKRDPFIYK*
Ga0079957_100576263300005805LakeMHTEDNDMTWIRHIIDRIKMEIRYRRKLKELRKRDPFIYK*
Ga0075108_1001841433300005913Saline LakeMFSWVRKIYDRIVLEIKYRKKLKKLRQRDPFIYK*
Ga0075108_1009448833300005913Saline LakeGAMKMNWFKKIIDRIKLEIRYRKKLKELKKRDPFTYR*
Ga0075118_1008732533300005933Saline LakeAMKMNWFKKIIDRIKLEIRYRKKLKELKKRDPFTYR*
Ga0007806_108222923300006100FreshwaterNSMNWLKNLYNRIALEIRYRKKLKELRKRDPFIYK*
Ga0007816_103693013300006115FreshwaterSRRNSMKWLRNLYNRIKLELHYRKKLKELRKRDPFIYK*
Ga0007867_102959313300006120FreshwaterRRNTMNWLRSLYNRIKLEIQYRKKLKELRKRDPFIYK*
Ga0075461_1024364313300006637AqueousAMKWIKRLINKVKLEIRYRKKLKELRKRDPFIYK*
Ga0098048_100440733300006752MarineMLVVRFIKRIIDKIKLEIRYRKRLKELRKRDPFIYK*
Ga0075481_1010025423300006868AqueousMITWFKKIYNKIKLEIKYRKKLKELRKRDPFIYK*
Ga0075472_1043093913300006917AqueousREIDMNWIRNLINRIKMEIRYRKKLKELRKRDQFIYK*
Ga0098060_1000053343300006921MarineMIKWIKNFYLKIKLNYRYKKKLKELRKRDPFIYK*
Ga0098046_111506233300006990MarineLVVRFIKRIIDKIKLEIRYRKRLKELRKRDPFIYK*
Ga0075458_1016887213300007363AqueousMNTKREIDMKWIKRLIQKIKMELHYRKRLKELRKRDPFIYK*
Ga0099846_109830013300007542AqueousKTLMNIFKRLWNKIKLEIRYRKKLKELRKRDPFIYK*
Ga0102945_100280923300007609Pond WaterMFTWFKKIYNKIKLEVRYRKKLKELRKRDPFIYK*
Ga0102945_105043023300007609Pond WaterMFTWFKKIYNKIKLEIRYRKKLKELRKRDPFIYK*
Ga0075480_1006457143300008012AqueousMIKWFKKIYNKIKLEIKYRKKLKELRKRDPFIYK*
Ga0098052_101546423300008050MarineMIKWIKKLVSKIRLEIRYRKKMKELKKRDPFIYK*
Ga0114340_113507313300008107Freshwater, PlanktonTKMKWIRRLWDRITLEYRYRKKLKELRKRDPFIYK*
Ga0114364_109383423300008267Freshwater, PlanktonEIEMNWIRQFWDRITLEYRYRKKLKELRKRDPFIYK*
Ga0114364_110822813300008267Freshwater, PlanktonIMKWIMNLYYRIRLEIRYRKKLRELRKRDPFIYK*
Ga0115650_132439323300008954MarineMKKWVQNIIAKIKLEIQYRKRLKELRKRDPFIYK*
Ga0102829_109976513300009026EstuarineNVMNWIRNLYNRIRLEIRYRKKLKELRKRDPFIYK*
Ga0114973_1063651313300009068Freshwater LakeRISYMNWIRNLIAKIRLEIRYRKKLKELRKRDPFIYK*
Ga0115566_10000064253300009071Pelagic MarineMIKWFKSLINRVKLEIAYRKKLKELRKRDPFIYK*
Ga0115566_1000591523300009071Pelagic MarineMITWLKNLISKIKLEIRYRKKLKELRKRDPFIYK*
Ga0115566_1056942613300009071Pelagic MarineMKIIKKILCWPLRWPKNLINKIKLEIRYRKKLKEL
Ga0114918_1041414113300009149Deep SubsurfaceQKECIMITWIKKLVNKIKLEIRYRKKLKELRKRDPFIYK*
Ga0114918_1061425023300009149Deep SubsurfaceMKRIKKILSWPKNLINKIKLEIRYRKKLKELRKRDPFIYK*
Ga0114963_1019082613300009154Freshwater LakeAMNWIRRMWAKLTLEIRYRKKLRELRKRDPFIYK*
Ga0114970_1020071413300009163Freshwater LakeKEIEMKWIKSIWDRITLEIRYRKKLRELRKRDPFIYK*
Ga0114975_1052564313300009164Freshwater LakeKETDMNWLKRMWDKITLEIRYRRKLKELRKRDPFIYK*
Ga0114979_1064083913300009180Freshwater LakeYGETNIMSWIKNIISRIRLEIRYRKKLKELRKRDPFIYK*
Ga0114976_1022141713300009184Freshwater LakeQRIMTMTWIKNLINRIRLEIRYRKKLKELRKRDPFIYK*
Ga0114993_1002817323300009409MarineMIKWIKKLYNKVVLHYRIKKKLKELRKRDPFIYK*
Ga0114998_1043258523300009422MarineMKTIKKILNWPKTLINKIKLEIRYRKKLKELRKRDPFIYK*
Ga0114932_1001713533300009481Deep SubsurfaceMIKWIKKLVSKIRLEIRYRKKIKELKKRDPFIYK*
Ga0115571_119641523300009495Pelagic MarineMDGNRLMKWIRSLINRIKLELRYRKRLKELRKRDP
Ga0114951_1028740623300009502FreshwaterMKMNWIKNLIARIRLEIRYRKKLKELRKRDPFIYK*
Ga0115572_1046203413300009507Pelagic MarineMDGNRLMKWIKNLINRIKLEIRYRKRLKELRKRDPF
Ga0115567_1062625923300009508Pelagic MarineMKTIKKILSWPKNLINKIKLEIRYRKKLKELRKRDPFIYK*
Ga0115567_1075444613300009508Pelagic MarineIMIKWFKNLISKIKLEIRYRKKLKELRKRDPFIYK*
Ga0115004_1049886213300009526MarineNRQKECIMITWIRNLINKIKLEVRYRKKLKELRKRDPFIYK*
Ga0115001_1009502423300009785MarineMKTIKKILSWPKNVINKIKLEIRYRKKLKELRKRDPFIYK*
Ga0136644_1033130023300010334Freshwater LakeDKRIKMNWIKRLWARITLEIHYRKKLKELRKRDPFIYK*
Ga0129333_1005952933300010354Freshwater To Marine Saline GradientMIKWIRNMVNRIKLEIRYRKKLKELRKRDPFIYK*
Ga0129333_1027477713300010354Freshwater To Marine Saline GradientMISWIKTLISRITLEIKYRKRLKELRKRDPFTYD*
Ga0129333_1043641213300010354Freshwater To Marine Saline GradientMISWIKALISRITLEIRYRKRLKELRKRDPFTYD*
Ga0133913_1079375413300010885Freshwater LakeYGETNQMSWIKNLINRVRLEIRYRKKLKELRKRDPFIYK*
Ga0133913_1236924923300010885Freshwater LakeMTMTWIKNIIDRIRLEIRYRKKLKELRKRDPFIYK*
Ga0133913_1273453923300010885Freshwater LakeMTMNWIKNIINRIRLEIRYRKKLKELRKRDPFIYK*
Ga0133913_1280411313300010885Freshwater LakeNKEIGMNWIRRLWARITLEIRYRKKLKELRKRDPFIYK*
Ga0136709_101200313300011184FreshwaterRLYGTTTKENAMKWLRNWINSVKLEIRYRRKLKELRKRDPFIYK*
Ga0129353_149741113300012525AqueousHMFNWFRKIINEIKLEIRYRKKLKALKKRDPFIYK*
Ga0129353_149741123300012525AqueousMFNWFRKIVDKIKLELRYRMKLKALKKRDPFIYK*
Ga0164293_1035344613300013004FreshwaterTEMNWIRRLWDRITLEIRYRKKLKELRKRDPFIYK*
Ga0129327_1032953913300013010Freshwater To Marine Saline GradientRINLMNWFKKIINRIKMELRYRKKLKELKKRDPFIYK*
Ga0164297_1001322023300013094FreshwaterMFNWIRNIINSIKREVTYRKRIKELRKRDPFIYK*
Ga0182047_152161213300016737Salt MarshCIMIKWFRNIINKIKLEIRYRKKLKELRKRDPFIYK
Ga0182093_140451113300016745Salt MarshTVTGATAMKWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0182078_1095702513300016747Salt MarshTNQEYEMSWIRKLINKIKLEIRYRKKLKELKKRDPFIYK
Ga0180120_1017787813300017697Freshwater To Marine Saline GradientCIMITWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0181399_102152253300017742SeawaterMLVVKLIKNVINKIKLEIRYRKRLKELRKRDPFIYK
Ga0181352_119033013300017747Freshwater LakeFFKGTNMKWIITAWKRLLLEIRYRKKLRELRKRDPFIYK
Ga0181400_100174043300017752SeawaterMLVVKFVKRIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0187220_112083213300017768SeawaterQRNGIMGFIKRIINKIKMEIRYRKRLKELRKRDPFIYK
Ga0181386_113174423300017773SeawaterLMISWIQKIYYKIKLEIQYRKKLKELKKRDPFIYK
Ga0181349_120561313300017778Freshwater LakeKETEMNWIRRLWDRITLEIRYRKKLKELRKRDPFIYK
Ga0181395_110891813300017779SeawaterGETVMAFIKRIINKIKMEIRYRKRLKELRKRDPFIYK
Ga0181346_122223913300017780Freshwater LakeANKETEMNWIRRIWDRITLEIRYRKKLKELRKRDPFIYK
Ga0181607_1024261033300017950Salt MarshKGRTIMGWIKRIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0181577_1051554413300017951Salt MarshCAINILLKETDMFNWITKIVDKIKLEIRYRKKLKELKKRDPFIYK
Ga0181590_1112590823300017967Salt MarshMRMKWIRNLINRIKMEIRYRKKLKELRKKDPFIYK
Ga0181585_1017803213300017969Salt MarshRTSLMNWLKKIINRIKMEIRYRKKLKELKKRDPFIYK
Ga0181569_1062564523300017986Salt MarshMKIVNWFKRQIDRIRLEIRYRKKLKELRKKDPFIYK
Ga0180432_1083589613300017989Hypersaline Lake SedimentSNRKTLMNIFKRLWNKIKLEIRYRKKLKELRKRDPFIYK
Ga0180432_1120768113300017989Hypersaline Lake SedimentKENNMTNWLKKIYNKIKREIRYRKKLKELRKRDPFIYK
Ga0181601_1065925233300018041Salt MarshIKMKWLKNLINKIKLELRYRKKLKELRKKDPFIYK
Ga0181567_1071733913300018418Salt MarshTTPIGSIAMNLIRRIINKIKMEIRYRKRLKELRRRDPFIYK
Ga0181568_1073576823300018428Salt MarshGNKKMINWVKSIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0211734_1132019013300020159FreshwaterTNQMSWIKRMIDRIKLEIRYRKKLKELRKRDPFIYK
Ga0211733_1098913013300020160FreshwaterMNIKKESDMKWIKRLINKIRMEIDYRKRLKELRKLDPFIYK
Ga0211735_1037317723300020162FreshwaterANKEINMKWIRRIWDRITLEIRYRKKLKELRKRDPFIYK
Ga0181602_1032388213300020173Salt MarshEKACIMVTWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0206124_1000362163300020175SeawaterMDGNRLMKWIRSLINRIKLELRYRKRLKELRKRDPFIYK
Ga0181599_133407323300020178Salt MarshATAMKWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0206129_1005311923300020182SeawaterMKTIKRILRFPKTLYNKIKLEIRYRKKLKELRKRDPFIYK
Ga0181597_1005048653300020194Salt MarshTTAMKWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0194119_1089470913300020220Freshwater LakePRDQKERTMKWIRNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0194047_1001802153300021354Anoxic Zone FreshwaterMIYIRKIHMNWIKNLIFRIKMELTYRKRLKELRKRDPFIYK
Ga0194048_1010294223300021519Anoxic Zone FreshwaterNKMSWIKNIYNRIMLEIRYRKKLKELRKRDPFIYK
Ga0194048_1015546423300021519Anoxic Zone FreshwaterMRMNWLRRLYLRIHLEIRYRIKLREARKRDPFIYK
Ga0222718_1037510223300021958Estuarine WaterMLVVRFIKRIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0222713_1031990023300021962Estuarine WaterKGIEMNWIKKIWARITLEIRYRKKLKELRKRDPFIYK
Ga0222712_1041279913300021963Estuarine WaterSKGHNMNWIKTLWARITLEIRYRKKLKELRKRDPFIYK
Ga0181351_108846313300022407Freshwater LakeNQMSWIKNLINRIKLEIRYRKKLKELRKRDPFIYK
Ga0255765_108661643300022921Salt MarshGRTIMGWIKRIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0255762_1036434023300023119Salt MarshPIGSIAMNLIRRLINKIKMEIRYRKRLKELRKRDPFIYK
Ga0214921_1054808823300023174FreshwaterTKMNWIRRLWDRITLEIRYRKKLKELRKRDPFIYK
Ga0222664_101336233300023296Saline WaterTHLTIAGAMKMNWFKKIIDRIKLEIRYRKKLKELKKRDPFTYR
Ga0210003_1003317123300024262Deep SubsurfaceMDMKWLKKIWQRIQLEIRYRRKLKELRKRDPFVYK
Ga0210003_135725323300024262Deep SubsurfaceMITWIKKLINKIKLEIRYRKKLKELRKRDPFIYKXVIYLQAS
Ga0228651_110565233300024293SeawaterQDTIIKMKWLRNLINKIKLEIRYRKKLKALRKKDPFIYK
Ga0244775_1125512213300024346EstuarineMLVVKLIKSVINKIKLEIRYRKRLKELRKRDPFIYK
Ga0209616_100743013300025091FreshwaterRLYGTTTKENAMKWLRNWINSVKLEIRYRRKLKELRKRDPFIYK
Ga0208874_102428713300025396FreshwaterNSMNWLRNLYNRIKLEIRYRKKLKELRKRDPFIYK
Ga0208260_110163513300025467FreshwaterNKMSLIRQLYNRIMLEIRYRKKLRELRKRDPFIYK
Ga0208379_116169013300025598FreshwaterKRKKTMNWIKKLIARIQLEIRYRKKLKELRKRDPFIYK
Ga0208414_104286013300025603Saline LakeAMKMNWFKKIIDRIKLEIRYRKKLKELKKRDPFTYR
Ga0209306_118259723300025680Pelagic MarineMLVVKFIKRIINKIKLEIRYRKRLKELRKRDPFIYK
Ga0209653_112563123300025695MarineMKTIKKILSWPKSLINKIKLEIRYRKKLKELRKKDPFIYK
Ga0209534_1041959223300025880Pelagic MarineQTTTGTTAMKWIKNLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0209951_100364343300026138Pond WaterEVINFIKKLYNKIVSKYRLQKKLKELRKKDPFIYK
Ga0209189_106459633300027747Freshwater LakeMIMNWLRKIYDRVMLEIRYRKRLKELRKRDPFIYK
Ga0209500_1028418733300027782Freshwater LakeKECDMKWIKNIYNRIKLELRYRKKLKELRKRDPFIYK
Ga0209830_1023605123300027791MarineMKTIKKILSWPKNVINKIKLEIRYRKKLKELRKRDPFIYK
(restricted) Ga0233415_1032620913300027861SeawaterKACIMITWIKNLISKIKLEIRYRKKLKELRKRDPFIYK
Ga0209668_1070699013300027899Freshwater Lake SedimentTKMKWIRRLWDRIVLEIRYRKKLKELRKRDPFIYK
Ga0209401_130787223300027971Freshwater LakeRISYMNWIRNLIAKIRLEIRYRKKLKELRKRDPFIYK
Ga0304729_122690323300028392Freshwater LakeQCRKNSMNWLKNLYNRIVLEIRYRKKLKELRKRDPFIYK
(restricted) Ga0247831_104098033300028559FreshwaterDIAMKWLKNIINRIKLEIRYRKKLKELRKRDPFIYK
(restricted) Ga0247841_1029641813300029286FreshwaterGTTNKGTKMKWIRNLYNRITLELRYRKKLKELRKRDPFIYK
Ga0307488_1022569823300031519Sackhole BrineMKTIKKILNWPKTLINKIKLEIRYRKKLKELRKRDPFIYK
Ga0310121_1072107413300031801MarineRGTKMIIVNWFKMLYNRIKLEIQYRKKLKELRKRDPFIYK
Ga0310123_1003854643300031802MarineMIIVNWFKMLYNRIKLEIQYRKKLKELRKRDPFIYK
Ga0315909_1014066533300031857FreshwaterSKMNWLKRIYARITLEIRYRRKLKELRKRDPFIYK
Ga0315909_1030779313300031857FreshwaterIEMNWIRQFWDRITLEYRYRKKLKELRKRDPFIYK
Ga0334995_0401923_3_1133300034062FreshwaterDYNMQWIKNLYNKIRLEIRYRKKLKELRKRDPFIYK
Ga0335020_0017044_4068_41933300034082FreshwaterPAFKRGHFMNCIKRLWDRITLEIRYRKKLKELRKRDPFIYK
Ga0335031_0708890_2_1093300034104FreshwaterNSMSWLRNLYNRIKLEIAYRKKLKELRKRDPFIYK


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