NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F046720

Metagenome / Metatranscriptome Family F046720

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F046720
Family Type Metagenome / Metatranscriptome
Number of Sequences 151
Average Sequence Length 107 residues
Representative Sequence MSVLETDLVDYIYLDDETETPVLVVSDPLTWRPPEDQRHLDALRDKLNTQIAFVETGQIKGVWPGYAGGTVRVEVVARCPLTTPAVQFYSLARKVMTDANMDLRFQLLDA
Number of Associated Samples 98
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated
(22.517 % of family members)
Environment Ontology (ENVO) Unclassified
(42.384 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(31.126 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.99%    β-sheet: 19.57%    Coil/Unstructured: 51.45%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.52.1.12: Restriction endonuclease FokI, C-terminal (catalytic) domaind2foka42fok0.6813
c.7.1.0: automated matchesd6lona_6lon0.67233
c.7.1.4: B12-dependent (class II) ribonucleotide reductased1l1la_1l1l0.64077
c.7.1.2: R1 subunit of ribonucleotide reductase, C-terminal domaind2x1ya22x1y0.63711
c.13.2.1: Anti-sigma factor antagonist SpoIIaad1vc1a_1vc10.63357


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF13450NAD_binding_8 11.26
PF07486Hydrolase_2 4.64
PF01729QRPTase_C 2.65
PF13561adh_short_C2 1.99
PF04851ResIII 1.99
PF00174Oxidored_molyb 1.99
PF01738DLH 1.99
PF01773Nucleos_tra2_N 1.99
PF12697Abhydrolase_6 1.32
PF07519Tannase 1.32
PF13531SBP_bac_11 1.32
PF05448AXE1 1.32
PF04964Flp_Fap 1.32
PF01593Amino_oxidase 1.32
PF01946Thi4 1.32
PF00756Esterase 1.32
PF00106adh_short 1.32
PF07992Pyr_redox_2 1.32
PF00561Abhydrolase_1 0.66
PF01022HTH_5 0.66
PF00990GGDEF 0.66
PF10099RskA 0.66
PF03883H2O2_YaaD 0.66
PF02445NadA 0.66
PF02798GST_N 0.66
PF00005ABC_tran 0.66
PF02668TauD 0.66
PF12848ABC_tran_Xtn 0.66
PF13472Lipase_GDSL_2 0.66
PF08281Sigma70_r4_2 0.66
PF01292Ni_hydr_CYTB 0.66
PF00033Cytochrome_B 0.66
PF09476Pilus_CpaD 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 4.64
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 2.65
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 2.65
COG3915Uncharacterized conserved proteinFunction unknown [S] 1.99
COG1972Nucleoside permease NupCNucleotide transport and metabolism [F] 1.99
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 1.99
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 1.32
COG1635Thiazole synthase/Archaeal ribulose 1,5-bisphosphate synthetaseCarbohydrate transport and metabolism [G] 1.32
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 1.32
COG3458Cephalosporin-C deacetylase or related acetyl esteraseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.32
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 0.66
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 0.66
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 0.66
COG3038Cytochrome b561Energy production and conversion [C] 0.66
COG3022DNA-binding protein YaaA associated with the oxidative stress responseReplication, recombination and repair [L] 0.66
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 0.66
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 0.66
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 0.66
COG0379Quinolinate synthaseCoenzyme transport and metabolism [H] 0.66


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated22.52%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa17.88%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil7.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.64%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.31%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost3.31%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.65%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.99%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.99%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.99%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.32%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.32%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.32%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.32%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.66%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.66%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.66%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.66%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.66%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.66%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.66%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.66%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.66%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.66%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.66%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.66%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.66%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001401Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004806Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005524Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006071Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300009697Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300015168Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300017560Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C BE-Lig BY (version 2)EnvironmentalOpen in IMG/M
3300017565Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft BY (version 2)EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021361Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2Host-AssociatedOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300025396Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)EnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025679Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025838Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027807Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027968Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028556Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaGHost-AssociatedOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028574Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028867Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029920Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20189J14885_101705323300001401Arctic Peat SoilMSVLETDLIDYIYLDDDDEIPVLVVSDPLTWRPPDHARHLEALRDKLNTQIAFVETGQIRGVWPPYSGGAVRVEVVARCPLSPAAADFYGVARKVMTKANMDLSFRLWDA*
JGIcombinedJ51221_1021365423300003505Forest SoilMSVLETDIIDYIYLDDDAETPVLVVSDPLTWKPPEDERHLDVLRDKLNAQIAFVETGQLKGVWPRYAGGFVRVEVVARCPLSGPAAHFYFVARQVMSTANMDLRFQLLDA*
Ga0062389_10482749513300004092Bog Forest SoilMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLNALRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVARCPLTTLASDFYDVAREVMTKANMDLRFQLLD
Ga0062386_10048833513300004152Bog Forest SoilMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDVLRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVARCPLTTMARDFYDVAREIMTKANMDLRFQLLDA*
Ga0007854_1024913923300004806FreshwaterMSVIETDLIDYIYLDDEDQTPVLVVSDPLTWRPPEDQRHLDMLREKLNAQIAFVETGQIRSIWPPYDGRPVRVEVIARCPLVGMAHDFYGLACKVMSEANMELRFQLLDA*
Ga0070670_10149129813300005331Switchgrass RhizosphereVYLEDETQTPVLVVSDPLTWRPPEDEDHLEMLREKLNSQIAFVESGQIKTIWEPYSGGLVRVEVVARHSLAGTAHEFYRVAAKVMKKSNIDLQFRLCDA*
Ga0070737_1008786423300005524Surface SoilMSVLDTDLVDYVYLDDQTQTPVLVVSDPLSWKPPEDEDHLDALREKLNAQIAFVETGQIRGVWPGYAGGLVKVEVVARYARDEAATEFYHLAADVMRKANMTLDFRLCDS*
Ga0070730_1000285733300005537Surface SoilMSVLETDLVDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRPVRVEVVARCPLTTTATEFYNIARQVMTRANMDLRFQLLDA*
Ga0068855_10078658423300005563Corn RhizosphereMSVLETDLIDYIYLDDRDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIVFIETGQIKAVWPGYDGRPVRVEVVARCPLTEGARHFYSLARKVMTEVNMDLRFQ
Ga0066708_1072243523300005576SoilMSVLETDLIDYIYLDDRDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIVFIETGQIKAVWPSYDGRPVRVEVVARCPLTEGARHFYSLARKVMTEANMDLRFQLLDA*
Ga0068857_10062300313300005577Corn RhizosphereMSVTDTDVVDYIYLDDDEQTPVLVVSDPLPWRPGDAAHLDILRNKLNAQIAFVETGQIRDVYPPYGGGRVRVEVVARCRLNDAAAQLYAAAQRTMAKANMDLAFRLWDA*
Ga0068870_1099227213300005840Miscanthus RhizosphereMSVTDTDVVDYIYLDDDEQTPVLVVSDPLPWRPGDAAHLDILRNKLNAQIAFVETGQIRDVYPPYGGGRVRVEVVARCRLNDAAAQLYAAAQ
Ga0097691_108011423300006055Arctic Peat SoilVSVLETDIIDYIYLDDDEGVPVLVVSDPLTWRPPEDQRHLDILRDKLNAQIAFVETGQIRGVWPPYSGGPVRVEVVARCPLTQAADHFYGLARRVMTDANMDLRFQLLDG*
Ga0007876_103751223300006071FreshwaterMSVLDTDLVDYVYLEDDTQTPVLVVSDPLTWRPPEDESHLETLRVKLNSQIAFVETGQIKSVWPGFAGGLVRVEVVARHSLNRMAEDFYDVARRVMKDANMDLRFHLCDA*
Ga0075522_10002336103300006638Arctic Peat SoilMSVLETDLIDYIYLDDDSATPVLVVSDPLPWRPPGDQGHLDALRHKLNAQIAFVETGQLKGVWPAWRGETVRVEVVARCPLTDEASDFYGLARQVMTGANMDLRFQLWDA*
Ga0075522_1011553023300006638Arctic Peat SoilMSVLETDLIDYIYLDDEDDTCVLVVCDPLSWRPPDDERHLDALRDKLNAQIAFVETGQIRGVWPAYKGGTVRVEVVAHCPLTQSADAFYGVARDVMERANMDLRFQLLDA*
Ga0075522_1018428123300006638Arctic Peat SoilMSVLETDIIDYIYLDGDSDMPVLVVSDPLTWRPPEDQRHLDALRDKLNTQIVFVETGQIRGVWPPYSGGPVRVEVVARCPLTDAANRFYGLARKVMTGANIDLRVQLLDG*
Ga0105245_1326063013300009098Miscanthus RhizosphereLDTDIVDYIYLDDDEETPVLVVSDPLTWRPPEDATHLDALRDKLNAQIAFVETGQLQGVWPGYHGGLVRVEVVARCRLSDQASHFYGVAQQVMHKANMDLCFRLWDA*
Ga0114966_1001538043300009161Freshwater LakeMSIRDVDVIDYVYLEEGGTPVLVVSDPLTWKPPEDEDHLELLREKLNSQIAFVENGQLCSIYPPYSGGIVRVEVVARHALNEAAREFYVIAEKVMRKSKIDLQFRLCDA*
Ga0114974_1001678323300009183Freshwater LakeMSIRDVDVVDYAYLEDDTGMPVLVVSDPLTWKPPEDEDHLELLREKLNSQIAFVETGQLGALYPPYRGGLVRVEVVARHALNLDAREFYGIAGKIMRKSNLDLQFRLCDA*
Ga0116229_1002657933300009500Host-AssociatedMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWKPPEDALHLEALRTKLNSQIAFVETGQIRGVWPGFAGGLVRVEVVARCALNPVAEEFYTVASKTMHKANMDLQFRLCDS*
Ga0116229_1007475543300009500Host-AssociatedMSVLETDLVDYIYLDDETETPVLVVSDPLTWRPPEDQRHLDALRDKLNTQIAFVETGQIKGVWPGYAGGTVRVEVVARCPLTTPAVQFYSLARKVMTDANMDLRFQLLDA*
Ga0116229_1008095733300009500Host-AssociatedMSVLETDMVDYVYLDDDTQTPVLVVSDPLSWKPPEDEDHLDALREKLNAQIAFVETGQIKGVWPGYAGGLVKVEVVARYALDRPAKEFYALASSVMEKANMRLDFRLCDG*
Ga0116229_1014403633300009500Host-AssociatedSLNPLDPSIRCGVKIMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAADQFYDLARKVMTGVNMDLKFQLLDA*
Ga0116229_1101099813300009500Host-AssociatedLSVLETDLVDYIYLDDEDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKSVWPRFDGRQVRVEVIARCPLTHTASEFYSLARQVMTKANMDLRFQLLDA*
Ga0116229_1136008713300009500Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAAGQFYDLARK
Ga0116230_10000149413300009510Host-AssociatedMSVLDIDVVDYVYLDDTTQTPVLVVSDPLTWKPPEDEDHLEALREKLNAQIAFVETGQIRNVWPGYAGGLVRVEVVARYALNRAATEFYGLAERVMREANMSLDFRLCDG*
Ga0116230_10006804103300009510Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPEYSGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGVNMDLRFQLLDA*
Ga0116230_1001069173300009510Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYSGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGANMDLRFQLLDA*
Ga0116230_1012579423300009510Host-AssociatedMSVLETDLVDYIYLDDNDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKSVWPPFDGRPVRVEVIARCPLTPSASEFYTLARQVMTKANMDLRFQLLDA*
Ga0116230_1025691723300009510Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAADQFYDLARKVMTGVNMDLKFQLLDA*
Ga0116230_1059792623300009510Host-AssociatedLDTDMVDYVYLDDETQTPVLVVSDPLSWKPPEDGDHLDALREKLNAQIAFVETGQIRGVWPGYTGGLVKVEVVARYALDRAARDFYALASEVMQKANMSLDFRLCDG*
Ga0116230_1084241423300009510Host-AssociatedMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWRPPEDEVHLEVLRTKLNSQIAFVETGQIKGVWPGFDGGLVRVEVVARFALNSAAEEFYDVAGRVMQQANMDLQFRLCDS*
Ga0105237_1253916013300009545Corn RhizosphereMSVLETDIVDYIYLDEDEETPVLVVTDPLTWRPPEDASHLDALREKLNAQIAFVETGQLRGVWPGYGGGLVRVEVVARCRLSDQASDFYGVAAQVMSKANMDLCFRLWDA*
Ga0116129_121070913300009633PeatlandMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVARCPLTTVARDFYDVARQVMTKANLELRFQLLDA*
Ga0105854_108517213300009660Permafrost SoilMSVLETDIIDYIYLDDESDTCVLVVNDPLTWRAPEEQRHIDVLRDKLNAQIEFVETGQILGVWPAYDGGVVRVEVVARCPLTQSAGEFYGLARDVMERANMDLRFQLLDA*
Ga0105856_134484713300009662Permafrost SoilMSVLETDIIDYIYLDDESDTCVLVVNDPLTWRAPEDQRHIDVLRDKLNAQIEFVETGQIRGVWPAYDGGVVRVEVVARCPLTQSAGEFYGLARDVMERANMDLRFQLLDA*
Ga0116231_1018107913300009697Host-AssociatedMSVLETDLIDYIYLDDDESTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYSGGPVRVEVIGRCPLTQAADQFYDLARKVMTGVNMDLRFQLLDA*
Ga0116231_1030695123300009697Host-AssociatedDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGVNMDLKFQLLDA*
Ga0116231_1062090123300009697Host-AssociatedMSVLETDLVDYIYLDDNDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKTVWPRFDGRQVRVEVIARCPLTDTASEFYTLARRVMTKANMDLRFQLLDA*
Ga0116231_1063418813300009697Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWADYSGGPVRVEVIGRCPLTQAADQFYDLARKVMTGVNMDLRFQLLDA*
Ga0116228_1002698163300009701Host-AssociatedMSVLETDIVDYVYLEDDTMTPVLVVSDPLTWKPPEDELHLEALRDKLNSQIAFVETGQIRGVWPGFAGGLVRVEVVARCALNPVAEEFYQVAGRTMTQANMDLQFRLCDS*
Ga0116228_1018978523300009701Host-AssociatedMSVLDTDMVDYVYLDDETQTPVLVVSDPLSWKPPEDGDHLDALREKLNAQIAFVETGQIRGVWPGYTGGLVKVEVVARYALDRAARDFYALASEVMQKANMSLDFRLCDG*
Ga0116228_1045721023300009701Host-AssociatedMSVLETDIVDYVYLDDDTMTPVLVVSDPLTWKPPEDDLHLEALRDKLNNQNTFVETGQINGVWPGFAGGLVRVEVVARCALNRMAEEFYTVASQTMHKANMDLQFRLCDS*
Ga0116228_1065114513300009701Host-AssociatedMGLAVVGREAVMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWKPPEDALHLEALRTKLNSQIAFVETGQIRGVWPGFAGGLVRVEVVARCALNPVAEEFYTVASKTMHKANMDLQFRL
Ga0116228_1085756113300009701Host-AssociatedMSVLETDVIDYIYLDDEDDIPVLVVSDPLTWRPPEAEQHLRALREKLNAQIAFVETGQLTGVWPDYDGGPVRVQVMARCALTDTANAFYGVAREIMTK
Ga0116227_1003032733300009709Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGVNMDLKFQLLDA*
Ga0116227_1088718513300009709Host-AssociatedMSVLETDLVDYIYLDDETETPVLVVSDPLTWRPPEDQRHLDALRDKLNTQIAFVETGQIKGVWPAYAGGTVRVEVVARCPLTTPAVQFYSLARKVMTDANMDLRFQLLDA
Ga0116226_1055424833300009787Host-AssociatedMSVLDTDMVDYVYLDDTTQTPVLVVSDPLTWKPPEDEDHLEALREKLNAQIAFVETGQIRNVWPGYAGGLVKVEVVARFALNRAAEEFYDLAERVMQ
Ga0116226_1110366423300009787Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYSGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGVNMDL
Ga0126361_1025506313300010876Boreal Forest SoilLDSLYAQRRPLMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRPVRVEVVARCPLTHMAADFYDLAREVMTKANMELRFQLLDA*
Ga0126350_1193961023300010880Boreal Forest SoilDDDSDTCVLVVCDPLTWRPPDDQRHLDALRDKLNAQIEFVETGQIRAIWPDYDGGQVRVEVVARCRLTQSAGEFYGLARDVMERANLDLRFQLLDA*
Ga0126350_1213553423300010880Boreal Forest SoilMSVLETDIIDYIYLDDESDTCVLVVNDPLTWRAPEDQRHIDVLRNKLNAQIEFVETGQIRGVWPAYDGGVVRVEVVARCPLTRSAGEFYGLAR
Ga0150985_10211304923300012212Avena Fatua RhizosphereSSMSVLDTDLIDYVYLDDADEIPVLVVSDPLGWRPPEDETHLDVLREKLNAQIAFVETGQIRKVWPPYSGALVRVEVVARHALNQAAEEFYGMARKVMRQANMSLDFRLCDA*
Ga0150985_10453744523300012212Avena Fatua RhizosphereAIRKECFMSVLETDIVDFVYLDDDDLTPVLVVSDPLTWKPPEDESHLEALREKLNSQIAFVETGQIQGVWPGYQGGLVRVEVIARHALNHAAEEFYGVAKRIMTKANMDLQFHLCDA*
Ga0150984_11738046413300012469Avena Fatua RhizosphereSAIRKECFMSVLETDIVDFVYLDDDDLTPVLVVSDPLTWKPPEDESHLEALREKLNSQIAFVETGQIQGVWPGYQGGLVRVEVIARHALNHAAEEFYGVAKRIMTKANMDLQFHLCDA*
Ga0153915_1107039223300012931Freshwater WetlandsMSVLETDLVDYIYLDDDEETPVLVVSDPLSWRPPEDAVHLDALREKLNAQIAFVETGQIRSVWPVYAGGLVRVEVVAKCALSDEASEFYVLARRTMAKANMDLAFRLWDG*
Ga0164294_1029472823300013006FreshwaterMSVREIDQVDYVYLDEQDMMPVIVVSDPLTWKPPEDEEHLETLRLKLNSQIAFVEGGQIKEVWPGYVGGLIKVEVIARHALTKAAKDFYGAASEVMKKANMRLDFHLCDA*
Ga0181534_1052033523300014168BogMSVLETDLVDYIYLDDDDEIPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKLVWPKFDGRQVRVEVIARCPLTEMANDFYDIARKVMTKANMDLRFQLLDA*
Ga0182015_1050480523300014495PalsaMSILETDIIDYIYLEDDSEVPVIVVSDPLTWRPPEDVRHLDVLREKLNTQIAFVETGQIRAIYPPYAGGLVRVEVIAKCPLTEAASHFYSIAKRVMTG
Ga0182024_1002745333300014501PermafrostMSVLETDLVDYIYLDDDSDTCVLVVCDPLTWRPLEHQRHIDALREKLNAQIAFVETGQIRAVWPQYDGGPVRVEVVARCPLTRGAGEFYYLARDVMEKANMDLRFQLLDA*
Ga0182024_1004337383300014501PermafrostMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRSVRVEVVAHCPLTHMAADFYDLAREVMTKANMELRFQLLDA*
Ga0182024_1014709433300014501PermafrostMSILETDIVDYIYLEDDSEVPVIVVSDPLTWRPPEDARHLDVLREKLNTQIAFVETGQIRAIYPPYAGGLVRVEVIAKCPLTEAASHFYSIAKRVMTGANMDLCFQLWDA*
Ga0182024_1021196343300014501PermafrostMSVLETDIIDYIYLDDDSDTPVLVVSDPLTWRPPEDQRHLDVLRDKLNTQIVFVETGQIRGVWPPYSGGPVRVEVVARCPLTDAANRFYGLARKVMTGANIDLRFQLLDG*
Ga0182024_1120671123300014501PermafrostMSVLETDIIDYIYLDDDSDTPVLVVSDPLTWRPPEDQRHLDILRDKLNTQIVFVETGQIRGVWPPYSGGPVRVEVVARCPLTVAADRFYGLARKVMTGANIDLRFQLLDG*
Ga0181525_1039378023300014654BogVLETDLIDYIYLDDENETPVLVVSDPLTWRPPEDQRHLDALREKLNAQIAFIETGQFKSVWPQYDGRVVRVEVVARCPLTDSANAFYALARKVMNEANMELRFQLLDA*
Ga0181519_10000007623300014658BogMSVLETDVIDYIYLDGDDEIPVLVVSDPLTWRPPEDQRHLHALRDKLNAQIAFVETGQLNGVWPSYNGGQVRVEVVARCALTDTASAFYGVAREVMNNANIDLRFQLLDA*
Ga0120104_110034213300014829PermafrostMSVLETDLVDYIYLDDDEEIPVLVVCDPLTWRPPEHERHLDVLREKLNAQIAFVETGQIRAVWPEYDGGQVRVEVVAHCPLTRSAGEFYYRARDVMEKANMDLR
Ga0167631_100294433300015168Glacier Forefield SoilMSVLETDLVDYIYLDDDEDIPVLVVCDPLSWRPPEDRRHLAALRDKLNAQIAFVETGQIRAVWPEYSGGPVRVEVVAHCPLSESAGEFYGLARQVMTGANMDLRFQLLDA*
Ga0182747_103422823300017560SoilMSVLETDLIDYVYLDDGDETPVLVVSDPLSWRPPEDETHLDVLREKLNAQIAFVETGQIKSVWPPYSGGLVRVEVVARHALNQAAEEFYGMARKVMRKANMRLDFRLCDA
Ga0182745_141696313300017565SoilMSVLETDLIDYVYLDDGDETPVLVVSDPLSWRPPEDETHLDVLREKLNAQIAFVETGQIKSVWPPYSGGLVRVEVVARHALNQAAEEFYGM
Ga0187871_1001200243300018042PeatlandMSILETDIIDYIYLEDDSEIPVLVVSDPLTWRPPEDALHLDVLREKLNTQIAFVETGQIRQIYPPYAGGLVRVEVIAKCPLTEAATRFYGLAKRVMTGANMDLCFQLWDA
Ga0210403_1073818623300020580SoilMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVARCPLTTMASEFYDIAREVMTKANMELRFQLLDA
Ga0210400_1000586953300021170SoilMSVLETDLVDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVARCPLSHMASDFYDLAREVMTKANMELRFQLLDA
Ga0210396_1004895723300021180SoilMSVLETDIIDYIYLDDDAKTPVLVVSDPLTWKPPEDKHHLDVLREKLNAQIAFVETGQIRGVWPAYAGGAVRVEVIARCPLTELAAHFYVLARGVMSNANMDLRFQLLDA
Ga0210396_1062520823300021180SoilMSVLETDIIDYIYLDDDAETPVLVVSDPLTWKPPEDERHLDVLRDKLNAQIAFVETGQLKGVWPRYAGGFVRVEVVARCPLSGPAAHFYFVARQVMSTANMDLRFQLLDA
Ga0213872_1030491513300021361RhizosphereMSVLETDLIDYIYLDDDATTPVLVVSDPLTWTPPEDQHHLDVLRDKLNAQIAFVETGQIKGVWHAYAGGVVRVEVVARCRLTEPAAHFYVLAREVMSTANMDLRFQLLDA
Ga0213874_1027079613300021377Plant RootsMSVLETDLVDYVYLDDHSMTPVLVVSDPLGWKPPEDETHLDMLRDKLNAQIAFVETGQIRCVWPGYAGGLVKVEVMARHALNRAAEEFYGVARGVMRQANMSLDFCLCDA
Ga0210387_1180852413300021405SoilMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRPVRVEVVARCPLTHMAADFYDLAREVMTKANMELRFQLLDA
Ga0210392_1040955823300021475SoilMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRAVRVEVVAHCPLTTTARDFYDLARQVMTKANMDLRFQLLDA
Ga0213853_1026004123300021861WatershedsMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDARHLDVLREKLNAQIAFIETGQIKAVWPKFDGRAVRVEVVARCPLTTLARDFYDVARKVMTQANMELRFQLLDA
Ga0213880_1004383223300021953Exposed RockHEMTPVLVVSDPLTWRPPEDETHLDALREKLNAQIAFVETGQIKGVWPGYAGGLVKVEVMARYALTKAAEEFYGMAGAVMRKANMRLDFCLCDA
Ga0208874_101635523300025396FreshwaterMSVLDTDLVDYVYLEDDTQTPVLVVSDPLTWRPPEDESHLETLRVKLNSQIAFVETGQIKSVWPGFAGGLVRVEVVARHSLNRMAEDFYDVARRVMKDANMDLRFHLCDA
Ga0208356_102171223300025504Arctic Peat SoilMSVLETDLIDYIYLDDEDDTPVLVVCDALSWRPPDHQRHLDALRDKLNAQIAFVETGQIRGVWPAYKGGTVRVEVVAHCPLTQSADAFYGVARDVMERANMDLRFQLLDA
Ga0208849_1000619153300025664Arctic Peat SoilMSVLETDLIDYIYLDDDSATPVLVVSDPLPWRPPGDQGHLDALRHKLNAQIAFVETGQLKGVWPAWRGETVRVEVVARCPLTDEASDFYGLARQVMTGANMDLRFQLWDA
Ga0208849_100146963300025664Arctic Peat SoilMSVLETDLIDYIYLDDDDEIPVLVVSDPLTWRPPDHARHLEALRDKLNTQIAFVETGQIRGVWPPYSGGAVRVEVVARCPLSPAAADFYGVARKVMTKANMDLSFRLWDA
Ga0208849_103144623300025664Arctic Peat SoilMSVLETDLIDYIYLDDEDDTPVLVVSDPLSWRPADHQRHLDALRDKLNAQIVFVETGQIRGVWPDYAGGPVRVEVVAHCPLTRGAGEFYGLARDVMERANMDLRFQLLDA
Ga0208849_104085223300025664Arctic Peat SoilMSVLDVDMVDYVYMDDDDEIPVLVVSDPLTWTAGEHARHLDALRDKLNTQIAFVETGQIAAVWPPYSGGPVRVEVVARCRLSPAASSFYGVARAVMTRANMDLAFRLWDA
Ga0207933_107841023300025679Arctic Peat SoilMSVLETDLVDYIYLDDDSDVPVLVVSDPLSWRPPEDQRHLDALRDKLNAQIAFVETGQIRAIHPAYEGGLVRVEVVAKCPLTEAASAFYGFARRVMTGANMDLCFQLWDA
Ga0208872_116885723300025838FreshwaterMSVIETDLIDYIYLDDEDQTPVLVVSDPLTWRPPEDQRHLDMLREKLNAQIAFVETGQIRSIWPPYDGRPVRVEVIARCPLVGMAHDFYGLACKVMSEANMELRFQLLDA
Ga0207674_1081398723300026116Corn RhizosphereDYIYLDDDEQTPVLVVSDPLPWRPGDAAHLDILRNKLNAQIAFVETGQIRDVYPPYGGGRVRVEVVARCRLNDAAAQLYAAAQRTMAKANMDLAFRLWDA
Ga0209596_137409213300027754Freshwater LakeMSIRDVDVIDYVYLEEGGTPVLVVSDPLTWKPPEDEDHLELLREKLNSQIAFVENGQLCSIYPPYSGGIVRVEVVARHALNEAAREFYVIAEKVMRK
Ga0209296_110651923300027759Freshwater LakeMSIRDVDVVDYAYLEDDTGMPVLVVSDPLTWKPPEDEDHLELLREKLNSQIAFVETGQLGALYPPYRGGLVRVEVVARHALNLDAREFYGIAGKIMRKSNLDLQFRLCDA
Ga0209086_1003699723300027770Freshwater LakeMSIRDVDVIDYVYLEEGGTPVLVVSDPLTWKPPEDEDHLELLREKLNSQIAFVENGQLCSIYPPYSGGIVRVEVVARHALNEAAREFYVIAEKVMRKSKIDLQFRLCDA
Ga0209208_1000155033300027807Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYSGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGANMDLRFQLLDA
Ga0209208_1000786373300027807Host-AssociatedMSVLDIDVVDYVYLDDTTQTPVLVVSDPLTWKPPEDEDHLEALREKLNAQIAFVETGQIRNVWPGYAGGLVRVEVVARYALNRAATEFYGLAERVMREANMSLDFRLCDG
Ga0209208_1006018943300027807Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPEYSGGPVRVEVIGRCPLTQAAGQFYDLARKVMTGVNMDLRFQLLDA
Ga0209208_1028334123300027807Host-AssociatedMSVLETDLVDYIYLDDNDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKSVWPPFDGRPVRVEVIARCPLTPSASEFYTLARQVMTKANMDLRFQLLDA
Ga0209166_1003412033300027857Surface SoilMSVLETDLVDYIYLDDEDETPVLVVTDPLTWRPPEDERHLDMLRDKLNAQIAFIETGQIKAVWPRFDGRPVRVEVVARCPLTTTATEFYNIARQVMTRANMDLRFQLLDA
Ga0209611_1005811033300027860Host-AssociatedMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWKPPEDALHLEALRTKLNSQIAFVETGQIRGVWPGFAGGLVRVEVVARCALNPVAEEFYTVASKTMHKANMDLQFRLCDS
Ga0209611_1007640243300027860Host-AssociatedMSVLETDMVDYVYLDDDTQTPVLVVSDPLSWKPPEDEDHLDALREKLNAQIAFVETGQIKGVWPGYAGGLVKVEVVARYALDRPAKEFYALASSVMEKANMRLDFRLCDG
Ga0209611_1015273013300027860Host-AssociatedLETDLVDYIYLDDETDTPVLVVSDPLTWRPPEDQRHLDALRDKLNTQIAFVETGQIKGVWPGYAGGTVRVEVVARCPLTTPAVQFYSLARKVMTDANMDLRFQLLDA
Ga0209611_1063604813300027860Host-AssociatedMSVLETDLIDYIYLDDDERTPVLVVSDPLTWRPPEDQRHLDVLRDKLNAQITFVETGQIKGVWPDYTGGPVRVEVIGRCPLTQAAGQFYD
Ga0209048_1075186623300027902Freshwater Lake SedimentVLVVSDPLSWRPPEDQRHLDVLREKLNAQIAFVETGQIRQIYPPYEGGLVRVEVIGKCPLTEAATEFYHLAKRTMTGANMELCFQLWDA
Ga0209061_107076113300027968Surface SoilMSVLDTDLVDYVYLDDQTQTPVLVVSDPLSWKPPEDEDHLDALREKLNAQIAFVETGQIRGVWPGYAGGLVKVEVVARYARDEAATEFYHLAADVMRKANMTLDFRLCDS
Ga0268266_1032887413300028379Switchgrass RhizosphereIDIVDYVYLEDETQTPVLVVSDPLTWRPPEDEDHLEMLREKLNSQIAFVESGQIKTIWEPYSGGLVRVEVVARHSLSGPAHEFYRVAAKVMKKSNMDLQFRLCDA
Ga0268265_1003673543300028380Switchgrass RhizosphereMSVTDTDVVDYIYLDDDEQTPVLVVSDPLPWRPGDAAHLDILRNKLNAQIAFVETGQIRDVYPPYGGGRVRVEVVARCRLNDAAAQLYAAAQRTMAKANMDLAFRLWDA
Ga0265337_104102613300028556RhizosphereMSIRDVDIVDYVYLEDDTGTPVLVVSDPMTWKPPEDEDHLELLREKLNSQIAFVETGQLGSIYPPYRGGIVRVEVVARHALTHEAKEFYGVAERIMRKSNLDLQFRLCDA
Ga0302145_1031152513300028565BogMSVLETDVIDYIYLDDEDEIPVLVVSDPLTWRPPEEQHHLRALREKLNAQIAFVETGQLNGVWPSYSGGPVRVQVVARCALTDAANAFYGVAREIMVDANIDLRFQLLDA
Ga0302153_1031586023300028574BogMSVLETDVIDYIYLDGDDEIPVLVVSDPLTWRPPEDQRHLHALRDKLNAQIAFVETGQLNGVWPSYNGGQVRVEVVARCALTDTASAFYGVAREVMINANIDLRFQLLDA
Ga0302234_1046674613300028773PalsaMSVLETDIVDYVYLEDDTMTPVLVVSDPLTWKPPEDELHLEALRDKLNSQIAFVETGQIRGVWPGFAGGIVRVEVVARCALNRMAEEFYNVASRTMH
Ga0302232_1020175513300028789PalsaYVYLEDDTMTPVLVVSDPLTWKPPEDELHLEALRDKLNSQIAFVETGQIRGVWPGFAGGIVRVEVVARCALNRMAEEFYNVASRTMHEANMDLQFRLCDS
Ga0302232_1039548913300028789PalsaMSVLETDLIDYIYLDDGDETPVLVVSDPLTWRPPEDQRHLDILRDKLNAQIVFIETGQIKAVWPKFDGRPVRVEVIARCPLTDLANDFYATARKVMTKANMDLRFQLLDA
Ga0302146_1031057613300028867BogMSVLETDVIDYIYLDGDDEIPVLVVSDPLTWRPPEDQRHLHALRDKLNAQIAFVETGQLNGVWPSYNGGQVRVEVVARCALTDTASAFYGVAREVMINANID
Ga0311358_1034484313300029915BogVSGDHTPMSVLETDVIDYIYLDDEDEIPVLVVSDPLTWRPPEEQHHLRALREKLNAQIAFVETGQLNGVWPSYSGGPVRVQVVARCALTDAANAFYGVAREIMVDANIDLRFQLLDA
Ga0302142_106211523300029920BogMSVLETDVIDYIYLDDEDEIPVLVVSDPLTWRPPEEQHHLRALREKLNAQIAFVETGQLNGVWPSYSGGPVRVQVVARCALTDAANAFYGVAREIMVDANIDLRFQ
Ga0311340_1103656423300029943PalsaILETDIIDYIYLEDDSEVPVIVVSDPLTWRPPEDVRHLDVLREKLNTQIAFVETGQIRAIYPPYAGGLVRVEVIAKCPLTEAASHFYSIAKRVMTGANMDLCFQLWDA
Ga0311371_1003425813300029951PalsaVLVVSDPLTWKPPEDELHLEALRDKLNSQIAFVETGQIRGVWPGFAGGIVRVEVVARCALNRMAEEFYNVASRTMHEANMDLQFRLCDS
Ga0311371_1013094743300029951PalsaMSVLETDLIDYIYLDDEDETPVLVVTDPLTWRPPEDEPHLDMLRDKLNAQIVFIETGQIKAVWPRFDGRPVRVEVVGRCPLTATASEFYDLARQVMTKANMELRFQLLDA
Ga0311371_1025059213300029951PalsaMSVLETDVIDYIYLDDDDEVPVLVVSDPLTWRPPKDQMHLRALREKLNAQIAFVETGQLTGVWPSYSGGPVRVHVVAHCALTDTANAFFGVAREIMIKANIDLRIQLLDA
Ga0311371_1093237823300029951PalsaMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWRPPEDELHLEALRTKLNSQIAFVETGQIRGVWPGFGGGLVRVEVVARFALNRAAEEFYGIATHVMQQANMDLQFRLCDS
Ga0311371_1154218323300029951PalsaMSVLETDLIDYIYLDDENETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQFKSVWPQYDGRVVRVEVVARCPLTDTANHFYDQARKVMTEANMDLRFQLLDA
Ga0311371_1224719413300029951PalsaMSVLETDVVDYIYLDDDAETPVLVVCDPLTWRPPEDQRHLDVLRDKLNAQIAFVETGQIRGVWPAYDGRRVRVEVVAHCPLTQAAGAFYSLAREVMTDANIDLRIHLLDA
Ga0311339_1081519713300029999PalsaMSILETDIVDYIYLEDDSEVPVLVISDPLTWRPPEDERHLDVLREKLNTQIAFVETGQIRSVFPPYAGGLVRVEVVGKCPLTQAASHFYGLAQRVMTGANMELCFQLWDA
Ga0311372_10010780163300030520PalsaMSVLETDMVDYVYLDDVTCTPVLVVSDPLTWKPPADEDHLDALRDKLNAQIAFVETGQIKGVWPGYAGGLVKVEVVARYALNHAAREFYGLAESVMAKANMQLDFRLCDG
Ga0311372_1067253123300030520PalsaMSVLETDLVDYVYLDDQTQTPVLVVSDPLTWKPPEDEVHLDALRDKLNAQIAFVETGQIRGVWPGYAGGLVKVEVVARFALNRAAEEFYGAAERVMKKANMRLDFRLCDG
Ga0311372_1078240323300030520PalsaMSVLDTDIVDYVYLDDQTQTPVLVVSDPLTWKPPEDITHLDALRDKLNAQIAFVETGQIRGVWPGYAGGLVKVEVVARYALNRAAEEFYGAAERVMRKANMHLDFRLCDG
Ga0311372_1132454813300030520PalsaMSVLETDMVDYVYLDDATCTPVLVVSDPLTWKPPEDEDHLDALREKLNAQIAFVETGQIKGVWPGYSGGLVKVEVVARYALNRAAKDFYGLAESVMAKANMQLDFRLCDG
Ga0311372_1164360323300030520PalsaETPVLVVSDPLTWRPPEDQQHLDVLRDKLNAQIAFIETGQFKSVWPQYDGRVVRVEVVARCPLTDAANHFYTLARKVMTEANIDLRFQLLDA
Ga0311372_1165092723300030520PalsaMSVLETDLVDYIYLDDEDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKLVWPEFDGRAVRVEVVARCPLTHAASQFYTLAAKV
Ga0311372_1177402413300030520PalsaMSVLETDVVDYIYLDDDAETPVLVVCDPLTWRPPEDQRHLDALRDKLNTQIAFVETGQIRGVWPAYDGRIVRVEVVAHCPLTQAAGEFYSLAREVMTSANMDLRVQLLDA
Ga0311372_1201164713300030520PalsaMSVLETDLVDYVYLDDQTQMPVLVVSDPLTWKPPEDESHLDALRDKLNAQIAFVETGQIRGVWPGYAGGLVKVEVVARYALNRAAEEFYGVAERVMQKANMQLDFRLCDG
Ga0311372_1205335213300030520PalsaMSVLETDIVDYVYLEDDTMTPVLVVSDPLTWKPPEDELHLEALRDKLNSQIAFVETGQIRGVWPGFAGGIVRVEVVARCALNRTAEEFYNIASRTMHAANMDLQFRLCDS
Ga0311354_1188065913300030618PalsaYVYLEDDTQTPVLVVSDPLTWRPPEDELHLEALRTKLNSQIAFVETGQIRGVWPGFGGGLVRVEVVARFALNRAAEEFYGIATHVMQQANMDLQFRLCDS
Ga0302311_1012993433300030739PalsaMSVLETDVVDYIYLDDDAETPVLVVCDPLTWRPPEDQRHLDVLRDKLNAQIAFVETGQIRGVWPAYDGRRVRVEVVAHCPLTQAAGAF
Ga0302314_1129148013300030906PalsaMSVLETDLVDYVYLDDQTQMPVLVVSDPLTWKPPEDESHLDALRDKLNAQIAFVETGQSRGVWPGYAGGLVKVEVVARYALNRAAEEFYGVAERVMQKANMQLDFRLCDG
Ga0302314_1173436913300030906PalsaMSVLETDIVDYVYLEDDTQTPVLVVSDPLTWRPPEDELHLEALRTKLNSQIAFVETGQIRGVWPGFGGGLVRVEVVARFALNRAAEEFYGIATHVMQQANMDLQFR
Ga0302325_1042501523300031234PalsaMSILETDIIDYIYLEDDSEVPVIVVSDPLTWRPPEDVRHLDVLREKLNTQIAFVETGQIRAIYPPYAGGLVRVEVIAKCPLTEAASHFYSIAKRVMTGANMDLCFQLWDA
Ga0302324_10016285243300031236PalsaMSVLETDLVDYIYLDDEDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIAFIETGQIKLVWPEFDGRAVRVEVVARCPLTHAASQFYTLAAKVMTKANMDLRFQLLDA
Ga0302326_1038621413300031525PalsaIIDYIYLEDDSEVPVIVVSDPLTWRPPEDVRHLDVLREKLNTQIAFVETGQIRAIYPPYAGGLVRVEVIAKCPLTEAASHFYSIAKRVMTGANMDLCFQLWDA
Ga0307413_1219528513300031824RhizosphereMSVRDIDIVDYVYLEDETQTPVLVVSDPLTWKPPEDEGHLEMLREKLNSQIAFVETGQIRGVWPGYQGGLVRVEVVARHALNKAAEEFYA
Ga0308175_10098826223300031938SoilMSVLETDIVDYVYLDEDEITPVLVVSDPLTWKPPEDADHLEALREKLNSQIAFVETGQIRGVWPGYQGGLVRVEVVARHALNRAAEEFYAIAGRIMTKANMDLQFHLCDA
Ga0308174_1097280213300031939SoilDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIVFIETGQIKAVWPGYDGRPVRVEVVARCPLTEGARHFYSLARKVMTEANMDLRFQLLDA
Ga0307409_10208392913300031995RhizosphereMSVRDVDIVDYVYLDDDTQTPVLVVSDPLSWKPPEDETHLEMLRDKLNAQIAFVETGQIKQVWPGYEGGLVKVEVVARCALNRAAEEFYGIARRTMNQANMALHFHLCDA
Ga0307416_10353667513300032002RhizosphereSVRDVDIVDYVYLDDDTQTPVLVVSDPLSWKPPEDETHLEMLRDKLNAQIAFVETGQIKQVWPGYEGGLVKVEVVARCALNRAAEEFYGIARRTMNQANMALHFHLCDA
Ga0318533_1115531913300032059SoilMSVLETDLVDYIYLDDENETPVLVVTDPLTWRPPEDEPHLDMLRDKLNAQIAFIETGQIKAIWPRFDGRQVRVEVVARCPLTATASEFYDLARKVMTKANMDLRFQL
Ga0308173_1089188213300032074SoilMSVLETDLIDYIYLDDRDETPVLVVSDPLTWRPPEDQRHLDMLRDKLNAQIVFIETGQIKAVWPGYDGRPVRVEVVARCPLTEGARHFYSLARKVMTEANMDLRFQLLDA
Ga0326727_1124472513300033405Peat SoilMSVLETDLVDYVYLDDQTQTPVLVVSDPLTWKPPEDETHLDALRDKLNAQIAFVETGQIRGVWPGYVGGLVKVEVVARYALNRAAEEFYGAAERVMKKANMRLDFRLCDG
Ga0326726_1236604323300033433Peat SoilSAYPFRIICGFVGGSMSVLETDIVDYIYLDDDEETPVLVVSDPLTWRPPEDADHLDALRAKLNAQIAFVETGQLQNVYPPYSGGLVRVEVVARCSLNDAASAFYGVARQVMNKANMDLCFRLWDA
Ga0316628_10112187123300033513SoilDYIYLDDDEETPVLVVSDPLSWRPPEDAVHLDALREKLNAQIAFVETGQIRNIWPVYAGGLVRVEVVAKCALNQAASEFYVLARRTMAKANMDLAFRLWDG
Ga0370487_0284064_17_3493300034170Untreated Peat SoilMSVLDTDLIDYVYLDDADEIPVLVVSDPLGWRPPEDETHLDMLREKLNAQIAFVETGQIRSIWPPYAGGLVRVEVVARHALNQAAEEFYGLARKVMREANMRLDFRLCDA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.