Metagenome / Metatranscriptome Family F046578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	58 residues
Representative Sequence	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKGK
Number of Associated Samples	106
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.19 %
% of genes near scaffold ends (potentially truncated)	34.44 %
% of genes from short scaffolds (< 2000 bps)	96.69 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.159 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.344 % of family members)
Environment Ontology (ENVO)	Unclassified (49.007 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.642 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.81% β-sheet: 0.00% Coil/Unstructured: 44.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.85672
a.24.14.1: FAT domain of focal adhesion kinase	d1k04a_	1k04	0.84504
f.63.1.1: Claudin	d3jbre_	3jbr	0.83723
f.13.1.0: automated matches	d3ddla_	3ddl	0.83482
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.8239

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF04392	ABC_sub_bind	5.96
PF00313	CSD	5.30
PF03060	NMO	0.66
PF00106	adh_short	0.66
PF01638	HxlR	0.66
PF01594	AI-2E_transport	0.66
PF12697	Abhydrolase_6	0.66
PF13701	DDE_Tnp_1_4	0.66
PF09392	T3SS_needle_F	0.66
PF04909	Amidohydro_2	0.66
PF02796	HTH_7	0.66
PF07638	Sigma70_ECF	0.66
PF03061	4HBT	0.66
PF03610	EIIA-man	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.96
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.66
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.66
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.66
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.66
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.16 %
Unclassified	root	N/A	23.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.16 %
Unclassified	root	N/A	23.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.16 %
Unclassified	root	N/A	23.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.58 %
Unclassified	root	N/A	23.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.97 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.62 %
Unclassified	root	N/A	23.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	48.34 %
Unclassified	root	N/A	23.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	1.32 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	44.37 %
Unclassified	root	N/A	23.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	1.32 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	33.11 %
Unclassified	root	N/A	23.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.84 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3.31 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.99 %
Bradyrhizobium niftali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	1.32 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.66 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.66 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	0.66 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3.31 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.99 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1.32 %
Bradyrhizobium niftali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	1.32 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Bradyrhizobium sp. AUGA SZCCT0176	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0176	0.66 %
Bradyrhizobium sp. USDA 4541	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. USDA 4541	0.66 %
Bradyrhizobium sp. G127	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	0.66 %
Microvirga sp. HBU65207	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU65207	0.66 %
Bradyrhizobium sp. NAS96.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	0.66 %
Bradyrhizobium sp. Leo121	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	0.66 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.66 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.66 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.66 %
Mesorhizobium sangaii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	0.66 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02JEBRG	Not Available	509	Open in IMG/M
2170459022\|GZEQPF101BDWPA	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300000955\|JGI1027J12803_102543955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1079	Open in IMG/M
3300000955\|JGI1027J12803_109378494	Not Available	728	Open in IMG/M
3300000956\|JGI10216J12902_101305687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	787	Open in IMG/M
3300002910\|JGI25615J43890_1089968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300002917\|JGI25616J43925_10402302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0176	503	Open in IMG/M
3300004156\|Ga0062589_101896799	Not Available	601	Open in IMG/M
3300005175\|Ga0066673_10487635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300005178\|Ga0066688_10191217	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005187\|Ga0066675_11451270	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005434\|Ga0070709_11594804	Not Available	531	Open in IMG/M
3300005445\|Ga0070708_100468606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1188	Open in IMG/M
3300005451\|Ga0066681_10477424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	767	Open in IMG/M
3300005553\|Ga0066695_10256603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1103	Open in IMG/M
3300005556\|Ga0066707_10518268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	773	Open in IMG/M
3300005556\|Ga0066707_10667460	Not Available	655	Open in IMG/M
3300005559\|Ga0066700_10584615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	779	Open in IMG/M
3300005598\|Ga0066706_10117436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1959	Open in IMG/M
3300006032\|Ga0066696_10426324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300006034\|Ga0066656_10232678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300006046\|Ga0066652_101328397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300006173\|Ga0070716_100328162	Not Available	1075	Open in IMG/M
3300006173\|Ga0070716_101124245	Not Available	628	Open in IMG/M
3300006642\|Ga0075521_10645816	Not Available	522	Open in IMG/M
3300007788\|Ga0099795_10083040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300009012\|Ga0066710_101812867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G127	920	Open in IMG/M
3300009038\|Ga0099829_10291832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1336	Open in IMG/M
3300009038\|Ga0099829_10583147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	929	Open in IMG/M
3300009088\|Ga0099830_10411278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300009088\|Ga0099830_10992292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300009090\|Ga0099827_11804134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	533	Open in IMG/M
3300009143\|Ga0099792_10320820	Not Available	926	Open in IMG/M
3300010159\|Ga0099796_10045442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1504	Open in IMG/M
3300010159\|Ga0099796_10218702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	780	Open in IMG/M
3300010333\|Ga0134080_10225541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	819	Open in IMG/M
3300011269\|Ga0137392_10923479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	718	Open in IMG/M
3300011270\|Ga0137391_10478498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1056	Open in IMG/M
3300011270\|Ga0137391_10542264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300011270\|Ga0137391_11189205	Not Available	610	Open in IMG/M
3300011271\|Ga0137393_11230952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300012096\|Ga0137389_10569615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	973	Open in IMG/M
3300012189\|Ga0137388_11324954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	659	Open in IMG/M
3300012198\|Ga0137364_10096580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2073	Open in IMG/M
3300012198\|Ga0137364_10192242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1493	Open in IMG/M
3300012198\|Ga0137364_11121466	Not Available	591	Open in IMG/M
3300012198\|Ga0137364_11218238	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300012199\|Ga0137383_10540786	Not Available	853	Open in IMG/M
3300012199\|Ga0137383_11075812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	583	Open in IMG/M
3300012200\|Ga0137382_10027933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3332	Open in IMG/M
3300012200\|Ga0137382_10071770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2221	Open in IMG/M
3300012200\|Ga0137382_10112441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1810	Open in IMG/M
3300012201\|Ga0137365_10814135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	682	Open in IMG/M
3300012202\|Ga0137363_10035564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3473	Open in IMG/M
3300012202\|Ga0137363_10352801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. USDA 4541	1218	Open in IMG/M
3300012202\|Ga0137363_11273477	Not Available	623	Open in IMG/M
3300012202\|Ga0137363_11727459	Not Available	518	Open in IMG/M
3300012203\|Ga0137399_10414145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1125	Open in IMG/M
3300012205\|Ga0137362_10318335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1347	Open in IMG/M
3300012205\|Ga0137362_10367665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1246	Open in IMG/M
3300012205\|Ga0137362_10683665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300012205\|Ga0137362_11132390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300012205\|Ga0137362_11511604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	558	Open in IMG/M
3300012206\|Ga0137380_10521696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1045	Open in IMG/M
3300012206\|Ga0137380_10802048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	813	Open in IMG/M
3300012208\|Ga0137376_10914602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300012209\|Ga0137379_11508800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	573	Open in IMG/M
3300012210\|Ga0137378_10065102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3301	Open in IMG/M
3300012210\|Ga0137378_10532237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	1083	Open in IMG/M
3300012210\|Ga0137378_10843271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU65207	829	Open in IMG/M
3300012211\|Ga0137377_11801365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	532	Open in IMG/M
3300012285\|Ga0137370_10082864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300012349\|Ga0137387_10316205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300012357\|Ga0137384_10366822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1192	Open in IMG/M
3300012361\|Ga0137360_10238951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1487	Open in IMG/M
3300012361\|Ga0137360_10444498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1098	Open in IMG/M
3300012361\|Ga0137360_10763144	Not Available	832	Open in IMG/M
3300012362\|Ga0137361_10455099	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1175	Open in IMG/M
3300012362\|Ga0137361_10617628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	993	Open in IMG/M
3300012362\|Ga0137361_11278911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	658	Open in IMG/M
3300012582\|Ga0137358_10847076	Not Available	604	Open in IMG/M
3300012582\|Ga0137358_11121972	Not Available	500	Open in IMG/M
3300012683\|Ga0137398_10941750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M
3300012685\|Ga0137397_11261271	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300012915\|Ga0157302_10148029	Not Available	795	Open in IMG/M
3300012922\|Ga0137394_10679759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	867	Open in IMG/M
3300012923\|Ga0137359_10164725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sangaii	1978	Open in IMG/M
3300012923\|Ga0137359_10662327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300012923\|Ga0137359_11154355	Not Available	661	Open in IMG/M
3300012923\|Ga0137359_11305280	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012923\|Ga0137359_11400699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300012923\|Ga0137359_11587038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012924\|Ga0137413_10611095	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012929\|Ga0137404_12005108	Not Available	540	Open in IMG/M
3300012929\|Ga0137404_12245218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012930\|Ga0137407_10459105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1186	Open in IMG/M
3300012941\|Ga0162652_100088025	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300012975\|Ga0134110_10174187	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300012977\|Ga0134087_10836323	Not Available	502	Open in IMG/M
3300012985\|Ga0164308_12274299	Not Available	504	Open in IMG/M
3300012989\|Ga0164305_10953805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS96.2	725	Open in IMG/M
3300015357\|Ga0134072_10196028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300017654\|Ga0134069_1358563	Not Available	525	Open in IMG/M
3300018431\|Ga0066655_11230116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018433\|Ga0066667_12224974	Not Available	511	Open in IMG/M
3300018468\|Ga0066662_10636865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1005	Open in IMG/M
3300019361\|Ga0173482_10100621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1048	Open in IMG/M
3300020002\|Ga0193730_1094526	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300020140\|Ga0179590_1083629	Not Available	851	Open in IMG/M
3300020140\|Ga0179590_1094267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	804	Open in IMG/M
3300020579\|Ga0210407_10297154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1261	Open in IMG/M
3300020579\|Ga0210407_11084342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	608	Open in IMG/M
3300020580\|Ga0210403_10680376	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300021078\|Ga0210381_10167757	Not Available	753	Open in IMG/M
3300021168\|Ga0210406_10239666	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300021170\|Ga0210400_11323097	Not Available	577	Open in IMG/M
3300021178\|Ga0210408_11217859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	574	Open in IMG/M
3300024288\|Ga0179589_10254177	Not Available	781	Open in IMG/M
3300025922\|Ga0207646_10347253	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300025922\|Ga0207646_10707546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	900	Open in IMG/M
3300025922\|Ga0207646_11337073	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300025939\|Ga0207665_10443164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	995	Open in IMG/M
3300026277\|Ga0209350_1098138	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300026285\|Ga0209438_1042046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1513	Open in IMG/M
3300026285\|Ga0209438_1122307	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300026304\|Ga0209240_1033634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1952	Open in IMG/M
3300026304\|Ga0209240_1155043	Not Available	711	Open in IMG/M
3300026331\|Ga0209267_1189741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	799	Open in IMG/M
3300026343\|Ga0209159_1235483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300026351\|Ga0257170_1010769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1132	Open in IMG/M
3300026356\|Ga0257150_1073647	Not Available	518	Open in IMG/M
3300026360\|Ga0257173_1019256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300026374\|Ga0257146_1085435	Not Available	516	Open in IMG/M
3300026377\|Ga0257171_1026863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	981	Open in IMG/M
3300026446\|Ga0257178_1027754	Not Available	696	Open in IMG/M
3300026446\|Ga0257178_1035260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	631	Open in IMG/M
3300026489\|Ga0257160_1054935	Not Available	691	Open in IMG/M
3300026507\|Ga0257165_1041650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	817	Open in IMG/M
3300026538\|Ga0209056_10295145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1121	Open in IMG/M
3300026551\|Ga0209648_10366628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300026551\|Ga0209648_10498123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	709	Open in IMG/M
3300026551\|Ga0209648_10667553	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300026551\|Ga0209648_10820470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300027629\|Ga0209422_1087342	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027903\|Ga0209488_10232695	Not Available	1384	Open in IMG/M
3300028536\|Ga0137415_10753570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	785	Open in IMG/M
3300028884\|Ga0307308_10198012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	962	Open in IMG/M
3300031093\|Ga0308197_10308301	Not Available	586	Open in IMG/M
3300031231\|Ga0170824_128720884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1019	Open in IMG/M
3300031446\|Ga0170820_17448179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300031474\|Ga0170818_108865739	Not Available	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.34%
Aquatic	Environmental → Aquatic	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.68%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.05%
Loam	Environmental → Terrestrial → Soil → Loam	6.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.99%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_09634340	2170459009	Grass Soil	PCGISSEGEGEMTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK
FA2_02950390	2170459022	Grass Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKTKGK
JGI1027J12803_1025439553	3300000955	Soil	MTLLTAAECREIADRKMLEAEGDPVHGKEFRATAEAWLFLAEKIEQAEMLEALKAKGK*
JGI1027J12803_1093784943	3300000955	Soil	MTLLTAAECREIADRKMLEAEGDPVHGKEFRATAEAWLFLAEKIEQAEAMEALKAKGK*
JGI10216J12902_1013056872	3300000956	Soil	MKLPLTPAECREIAERKMVEGEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKTKGE*
JGI25615J43890_10899681	3300002910	Grasslands Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIE
JGI25616J43925_104023021	3300002917	Grasslands Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKGK*
Ga0062589_1018967991	3300004156	Soil	VTLLTAAECREIAERKMGEALDDRRHGKELKATAQAWLALAERIAQAE
Ga0066673_104876352	3300005175	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIAQAEAIEALKANAK*
Ga0066688_101912172	3300005178	Soil	VTLLSSPKCLEIAERKIGEAAGDRRYGKELRATAQAWLVLAEKIAQAEALEALKLNGK*
Ga0066675_114512701	3300005187	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKTKGK*
Ga0070709_115948042	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLTAAECREIAERKMGEALDDRRHGKELKATAQAWLALAERIAQAEAIEALKAKGKGK
Ga0070708_1004686062	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKVKAK*
Ga0066681_104774242	3300005451	Soil	LLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANAK*
Ga0066695_102566033	3300005553	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAERIAQAEAIEALKPKGK*
Ga0066707_105182683	3300005556	Soil	AECLEIADRKMGEAVADRRHGKELRATAQVWLVLAERIAQTEAIEALQAK*
Ga0066707_106674602	3300005556	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK*
Ga0066700_105846152	3300005559	Soil	MTLLTSAECRKIAERKMVEAEGDLVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK*
Ga0066706_101174361	3300005598	Soil	LTSAECLKIAERKMGEAVGDRRHGKELRATAQAWLVLAERIAQAEAIEALKAKGK*
Ga0066696_104263242	3300006032	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK*
Ga0066656_102326782	3300006034	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLILAEMIAQAEAIEALKANAK*
Ga0066652_1013283972	3300006046	Soil	MTLLTAAECREIADRKMVEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEAVKAKEK*
Ga0070716_1003281622	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTSAECREIAERKMVEAEGDPLHGKEFRATAEAWLFLADKIEQAEALEALKAKGK*
Ga0070716_1011242451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLTAAECREIADRKMVEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEA
Ga0075521_106458163	3300006642	Arctic Peat Soil	LTAAECREIAERKMGEAAGDRRHGKELRATAEAWLVLAEKIEQAEAI
Ga0099795_100830403	3300007788	Vadose Zone Soil	MTLLTSAECREIAERKMVEADGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKTKGK*
Ga0066710_1018128671	3300009012	Grasslands Soil	LLTSAECLKIAERKMGEAVGDRRHGKELRATAQAWLVLAERIAQAEAIEALKAKGK
Ga0099829_102918323	3300009038	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKARGK*
Ga0099829_105831473	3300009038	Vadose Zone Soil	ECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK*
Ga0099830_104112781	3300009088	Vadose Zone Soil	KILTAAECLAIAERKMGEAIGDRRHGKELRAMAQAWLVLAERIAQAEAIEALKAERK*
Ga0099830_109922922	3300009088	Vadose Zone Soil	MTLLTSAECREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKAKGK*
Ga0099827_118041341	3300009090	Vadose Zone Soil	GKILTVAECLEIADRKMGEAVSDRRHGKELQATAQAWLVLAERIAQAEAIEALKAKGK*
Ga0099792_103208203	3300009143	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK*
Ga0099796_100454422	3300010159	Vadose Zone Soil	VLTSAECLKIAERKMGEAVGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK*
Ga0099796_102187023	3300010159	Vadose Zone Soil	LTSAECLKIAERKMEEAVSDRRHGKELSATAQAWLVLAERIAQTEAIEALKAKGK*
Ga0134080_102255411	3300010333	Grasslands Soil	GEMTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK
Ga0137392_109234793	3300011269	Vadose Zone Soil	TAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKARGK*
Ga0137391_104784982	3300011270	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAK*
Ga0137391_105422641	3300011270	Vadose Zone Soil	VTLLTAAECREIAERKMGEAVGDRRHGKELRATAQAWLVLAERIAQAEAIEALKAKRK*
Ga0137391_111892051	3300011270	Vadose Zone Soil	MTLLTAAECREIADRKMVEAEGDPVHGKEFRATAEAWLFLAEKIEQAETIEALKAKGK*
Ga0137393_112309522	3300011271	Vadose Zone Soil	MTLLTSAECREIADRKMSEAAGDPLRGKESRATAEAWLVLAEKIEQAEAIEALKAKGK*
Ga0137389_105696151	3300012096	Vadose Zone Soil	GKILTAAECLEIADRKMGEAVADRRHGKELSATAQAWLVLAERIAQAEAIETLKAKVK*
Ga0137388_113249542	3300012189	Vadose Zone Soil	MTLLTSAEYREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKAKGK*
Ga0137364_100965805	3300012198	Vadose Zone Soil	MTLLTAAECREIADRKMLEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0137364_101922423	3300012198	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEALKAKGKLQGIAC*
Ga0137364_111214662	3300012198	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANAK*
Ga0137364_112182382	3300012198	Vadose Zone Soil	MTLLTPAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIDALKAKGK*
Ga0137383_105407862	3300012199	Vadose Zone Soil	MTLLTAAECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0137383_110758123	3300012199	Vadose Zone Soil	SAECLKIAERKMGEAIGDRRHGKELKATAQAWLVLAERIAQAEAIEALKAKGK*
Ga0137382_100279331	3300012200	Vadose Zone Soil	RLLTSAECLKIAERKMGEAVGDRRHGKELRATAQAWLILAERIAQTEAIEALKAKGK*
Ga0137382_100717704	3300012200	Vadose Zone Soil	MALLTSAECREIAERKMVEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEALKAKGKLQGIAC*
Ga0137382_101124413	3300012200	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAN*
Ga0137365_108141351	3300012201	Vadose Zone Soil	EEGEMTLFTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK*
Ga0137363_100355648	3300012202	Vadose Zone Soil	NGILTAAECRKIAERKMGEAVGDRRHGKELKATAQAWLVLAERIAQAEAIEARKAKGK*
Ga0137363_103528012	3300012202	Vadose Zone Soil	MGNIERLKVLTSAECRKIAERKLGEAVGDRRHGKELKATAQAWLFLAEKIERAEAIEALKAK*
Ga0137363_112734771	3300012202	Vadose Zone Soil	AECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKAK*
Ga0137363_117274591	3300012202	Vadose Zone Soil	EIMTLLTAAECREIADRKRLEAEGDRLHGEEFRATADAWLVLAEKIAQAEAIEAVKAKGK
Ga0137399_104141454	3300012203	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATADAWLVLAEKIAQAEAIEALKAKGK*
Ga0137362_103183353	3300012205	Vadose Zone Soil	VAERVILTAAECRKVAERKIGEAIGDRRHGKELKATAQAWLVLAERIAQAEAIEALKAKRK*
Ga0137362_103676652	3300012205	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKAKWK*
Ga0137362_106836652	3300012205	Vadose Zone Soil	VTLLTAVECREIADRKMVEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKAKGTATKR*
Ga0137362_111323901	3300012205	Vadose Zone Soil	IAERKMIEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEALKAKGKLQGIAC*
Ga0137362_115116042	3300012205	Vadose Zone Soil	MTLLTSAECREIADRKMSEAAGDPLRGKELRATAEAWLVLAEKIEQAEAIEALKAKGK*
Ga0137380_105216961	3300012206	Vadose Zone Soil	LTAAECLKIAERKMGEAVGDRRHGKELKATAQAWLVLAERIAQAQAIEALKAKGK*
Ga0137380_108020481	3300012206	Vadose Zone Soil	AECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0137376_109146021	3300012208	Vadose Zone Soil	ILTAAECRKIAERKMGEAVGDRRHGKELKATAQAWLVLAERIAQIEATEALKGEREMT*
Ga0137379_115088002	3300012209	Vadose Zone Soil	MTLLTAAECREIADRKMMEAAGDRLQGKEFRVTAEAWLILAEKIEQAESIEALKMKGK*
Ga0137378_100651027	3300012210	Vadose Zone Soil	MTLLTAAECREIADRKMVEAEGDPLHGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0137378_105322371	3300012210	Vadose Zone Soil	TSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK*
Ga0137378_108432712	3300012210	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKECRATAQAWLILAERIAQAEAIEALKPKGK*
Ga0137377_118013652	3300012211	Vadose Zone Soil	MTLLTSAECQEIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKAKGK*
Ga0137370_100828642	3300012285	Vadose Zone Soil	MTLLTSAECREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKASRSAK
Ga0137387_103162054	3300012349	Vadose Zone Soil	MTLLTSAECREITERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK*
Ga0137384_103668222	3300012357	Vadose Zone Soil	MTLLTAAECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQDEAIEALKMKGK*
Ga0137360_102389511	3300012361	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKAKGK*
Ga0137360_104444984	3300012361	Vadose Zone Soil	ECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0137360_107631441	3300012361	Vadose Zone Soil	MTLLTSAECREIAERKMIEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEALKAKGTATKR*
Ga0137361_104550992	3300012362	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKAKGK*
Ga0137361_106176281	3300012362	Vadose Zone Soil	ILTAAECREIADRKMGEAVGDRRHGKELKATAQAWLVLAERIAQAEAIEALKAKGE*
Ga0137361_112789112	3300012362	Vadose Zone Soil	VTLLTAVECREIADRKMVEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKGEGQMTTG*
Ga0137358_108470761	3300012582	Vadose Zone Soil	MTLHTSAEWREIAERKMVEAEGDPVHSKEFRATAHAWLVLAEMIEQAEAIEALKTKGKRTS*
Ga0137358_111219722	3300012582	Vadose Zone Soil	ECREIAERKMVEAEGDPVHGREFRATAHAWLVLAEMIEQAGAIEALKTKGK*
Ga0137398_109417502	3300012683	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALEAKGK*
Ga0137397_112612711	3300012685	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKAK*
Ga0157302_101480293	3300012915	Soil	VTLLTAAECREIAERKMGEAVGDQRYGEELKATAQAWLVLAERIAQAEAIEALKAEGK*
Ga0137394_106797593	3300012922	Vadose Zone Soil	ERDIDRGRMPEIAERKMGEVGGDRRHGKELRATAQAWLVLAERIAQADAIEALKAKGK*
Ga0137359_101647251	3300012923	Vadose Zone Soil	MTLLTSAECREIAERKMIEAEGDPVHGKEFRATAEAWLFLAEKIEQAETLEALKAKGKLQGIAC*
Ga0137359_106623271	3300012923	Vadose Zone Soil	VTLLTAVECREIADRKMVEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKAKGK*
Ga0137359_111543552	3300012923	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHSKEFRATAHAWLVLAEMIEQAEAIEALKTKGKRTS*
Ga0137359_113052801	3300012923	Vadose Zone Soil	LVRERLNGILTSAECLKIAERKMGEAVGDRRHGKELSATAQAWLVLAERIAQTEAI
Ga0137359_114006993	3300012923	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKAKG
Ga0137359_115870383	3300012923	Vadose Zone Soil	SAECRKIAERKMGEAIGDRRHGKELRAMAQAWLVLAERIAQAEAIEALKAERK*
Ga0137413_106110954	3300012924	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKPKGK*
Ga0137404_120051081	3300012929	Vadose Zone Soil	MTLLTSAECWEIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK*
Ga0137404_122452182	3300012929	Vadose Zone Soil	GKILTAVECLKIAERKMGEAVGDRRHGKELRATAQAWLVLAERIAQTEAIEAKAKGK*
Ga0137407_104591053	3300012930	Vadose Zone Soil	RLNGILTAAECRKIAERKMGEAIGDRRHGKELKATAQAWLVLAERIAQAEAIEALKAKGK
Ga0162652_1000880251	3300012941	Soil	MTLNTPAECREIADAKMVEAEGDPVHGREFRATAHAWLVLAEMIEQAEAIEALKAKGSE*
Ga0134110_101741872	3300012975	Grasslands Soil	MTLLTSAECRAIAERKMVEAEGDPVHGKEFRATAQAWLVLAERIAQAEAIEALKAKEK*
Ga0134087_108363232	3300012977	Grasslands Soil	MTLLTSAECREIADRKMSEAAGDPLRGKELRATAEAWLVLAEKIEQAEAIE
Ga0164308_122742991	3300012985	Soil	MTLLTAAECREIADRKMLKAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKARGK*
Ga0164305_109538052	3300012989	Soil	MTLLTAAECREIADRKMLEAKGDPLHGKEFRATAEAWLFLAEKIEQAEAIEALKAKGK*
Ga0134072_101960282	3300015357	Grasslands Soil	MTLLTSAECREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK*
Ga0134069_13585632	3300017654	Grasslands Soil	MTLLTAAECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKVK
Ga0066655_112301161	3300018431	Grasslands Soil	ECRKIAERKMGEAVGDRRHGKELRATAEAWLVLAERIAQIEAIEALKAKGE
Ga0066667_122249742	3300018433	Grasslands Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK
Ga0066662_106368653	3300018468	Grasslands Soil	MTLLTSAECREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAIEALKAKGK
Ga0173482_101006212	3300019361	Soil	MTLLTAAECREIADRKMVEAEGDPLHGKEFRATAEAWLFLAEKIEQAETLEALKAKGK
Ga0193730_10945262	3300020002	Soil	MTLLTSAECWEIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK
Ga0179590_10836293	3300020140	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHSKEFRATAHAWLVLAEMIEQAEAIEALKTKGKRT
Ga0179590_10942673	3300020140	Vadose Zone Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKARGK
Ga0210407_102971543	3300020579	Soil	MTLLTSAECREIADRKMVEAEADPVHGKEFRATAEAWLFLAEKIEQAETLEAVKAKGK
Ga0210407_110843421	3300020579	Soil	GEMTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKVK
Ga0210403_106803762	3300020580	Soil	MTLLTAAECREIADRKRLEAERDRLHGEEFRATADAWLVLAEKIAQAEAIEALKAKGK
Ga0210381_101677572	3300021078	Groundwater Sediment	MTPLSSAECRQIVQRKLLEAMGDRRYGKVLRATAEAWQVLAEKVEQSEAIEARFLRR
Ga0210406_102396662	3300021168	Soil	MTLLTSAECREIADRKMVEAEADPVHGKEFRATAEAWLFLAEKIERAEMLEALKAKGK
Ga0210400_113230971	3300021170	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKVK
Ga0210408_112178592	3300021178	Soil	MTLLTSAEYREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKVK
Ga0179589_102541771	3300024288	Vadose Zone Soil	MTLLTPAECREIAERKMVEAEGDPVHGREFRATAHAWLVLAEMIEQAGAIE
Ga0207646_103472531	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTAAECREIADRKMLEAKGDPLHGKEFRATAEAWLFLAEKIEQAEAIEALKAKGK
Ga0207646_107075461	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAERIAQAEAIEALKAKGK
Ga0207646_113370731	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTAAACREIADRKMLEAAGDRLQRKEFRATAEAWLVLAEKIEQAEAIEGLKMKGK
Ga0207665_104431641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLTAAERREIADRKMLEADGDPLHGKEFRATAEAWLFLADKIEQAEALEA
Ga0209350_10981382	3300026277	Grasslands Soil	MTLLTAAECREIADRKMMEAAGDRLQGKEFRATAEAWLVLAEKIEQAEAIEALKMKGK
Ga0209438_10420462	3300026285	Grasslands Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKAKGK
Ga0209438_11223071	3300026285	Grasslands Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKGK
Ga0209240_10336342	3300026304	Grasslands Soil	MTLLTSAECREIAERKMVEAKGDPVDGKEFRATAQAWLVLTEKIERAEAIEALKAKAK
Ga0209240_11550433	3300026304	Grasslands Soil	TLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK
Ga0209267_11897411	3300026331	Soil	RLKGKVLTAAECWEIADRKMGEAVADRRHGKELRATAQAWLVLAERIAQADAIEALKAKG
Ga0209159_12354831	3300026343	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKA
Ga0257170_10107691	3300026351	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK
Ga0257150_10736471	3300026356	Soil	MTLLTPAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKGK
Ga0257173_10192562	3300026360	Soil	AAECLEIADRKMGEAVSDRRHGKELRATAQAWLVLAERIAQADAIEALKAKGK
Ga0257146_10854352	3300026374	Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKGK
Ga0257171_10268631	3300026377	Soil	MTLLTPAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKAK
Ga0257178_10277541	3300026446	Soil	MTLLTPAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK
Ga0257178_10352602	3300026446	Soil	LKGKILTAAECLEIADRKMGEAVSDRRHGKELRATAQAWLVLAERIAQTEAIEALKAKEK
Ga0257160_10549353	3300026489	Soil	TLLTPAECREIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK
Ga0257165_10416501	3300026507	Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKAREK
Ga0209056_102951451	3300026538	Soil	RLKGKILTAAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKA
Ga0209648_103666282	3300026551	Grasslands Soil	MTLLTGAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKARGK
Ga0209648_104981233	3300026551	Grasslands Soil	EGEGEMTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIEALKAKAK
Ga0209648_106675531	3300026551	Grasslands Soil	MTLLTSAECREIADRKMSEAAGDPLRGKEFRATAEAWLVLAEKIEQAEAI
Ga0209648_108204702	3300026551	Grasslands Soil	VTLLTAAECREIAERKMGEAVGDRRHGKELRATAQAWLVLAERIAQTEAIGALKAKGK
Ga0209422_10873421	3300027629	Forest Soil	MTLLTSAECREIAERKMVETEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKAKGK
Ga0209488_102326953	3300027903	Vadose Zone Soil	MTLLTPKECRKIAERKMVEAEGDPVHGKEFRATAHAWLVLAEMIEQAEAIEALKANGK
Ga0137415_107535702	3300028536	Vadose Zone Soil	MTLLTSAECREIAERKMVEAEGDPVHGKEFRATAQAWLVLAEKIERAEAIDALKAKGK
Ga0307308_101980122	3300028884	Soil	KGKILTAVECLEIADRKMGEAVSDRRHGKELRATAQAWLVLAERIAQADAIKALKAKGK
Ga0308197_103083011	3300031093	Soil	MTLLNTPAECREIADAKMVEAEGDPVHGREFRATAHAWLVLAEMIEQAEAIEALKAKGSE
Ga0170824_1287208841	3300031231	Forest Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATAEAWLVLAEKIAQAEAIEALKVKGK
Ga0170820_174481792	3300031446	Forest Soil	MTLLTAAECREIADRKMLEAEGDRLHGEEFRATADAWLVLAEKIAQAEAIEALKVKGK
Ga0170818_1088657391	3300031474	Forest Soil	MTLLTAAECREIADRKMLEAEGDRLHSEEFRATAEAWLVLAEKIAQAEAIEALKAKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences