NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F046573

Metagenome Family F046573

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046573
Family Type Metagenome
Number of Sequences 151
Average Sequence Length 41 residues
Representative Sequence NQTGIRAFCAEEDAVVRVDPAGVCSNTEAGILTFNPLNQ
Number of Associated Samples 122
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.66 %
% of genes near scaffold ends (potentially truncated) 98.68 %
% of genes from short scaffolds (< 2000 bps) 81.46 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (59.603 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.583 % of family members)
Environment Ontology (ENVO) Unclassified
(28.477 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.344 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.94%    β-sheet: 5.97%    Coil/Unstructured: 82.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF07963N_methyl 34.44
PF13544Obsolete Pfam Family 9.93
PF13633Obsolete Pfam Family 5.96
PF00005ABC_tran 4.64
PF00072Response_reg 2.65
PF05977MFS_3 1.99
PF12679ABC2_membrane_2 1.99
PF13432TPR_16 1.32
PF07228SpoIIE 1.32
PF01740STAS 1.32
PF08448PAS_4 1.32
PF00482T2SSF 0.66
PF07676PD40 0.66
PF14238DUF4340 0.66
PF07479NAD_Gly3P_dh_C 0.66
PF00753Lactamase_B 0.66
PF06739SBBP 0.66
PF12838Fer4_7 0.66
PF08241Methyltransf_11 0.66
PF01544CorA 0.66
PF13419HAD_2 0.66
PF11954DUF3471 0.66
PF00561Abhydrolase_1 0.66
PF13650Asp_protease_2 0.66
PF02811PHP 0.66
PF01120Alpha_L_fucos 0.66
PF00563EAL 0.66
PF00180Iso_dh 0.66
PF03992ABM 0.66
PF13643DUF4145 0.66
PF14559TPR_19 0.66
PF02371Transposase_20 0.66
PF07238PilZ 0.66
PF05697Trigger_N 0.66
PF00255GSHPx 0.66
PF14307Glyco_tran_WbsX 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.99
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.66
COG0386Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxidesDefense mechanisms [V] 0.66
COG0544FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)Posttranslational modification, protein turnover, chaperones [O] 0.66
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.66
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.66
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.66
COG3547TransposaseMobilome: prophages, transposons [X] 0.66
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 0.66
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.66
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.66


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.60 %
UnclassifiedrootN/A40.40 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000156|NODE_c0640396All Organisms → cellular organisms → Bacteria2094Open in IMG/M
3300000789|JGI1027J11758_12651845Not Available551Open in IMG/M
3300001867|JGI12627J18819_10028253All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2313Open in IMG/M
3300004081|Ga0063454_101761017All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis541Open in IMG/M
3300004152|Ga0062386_100388786All Organisms → cellular organisms → Bacteria → Acidobacteria1122Open in IMG/M
3300004152|Ga0062386_101074372All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300005526|Ga0073909_10449630Not Available615Open in IMG/M
3300005541|Ga0070733_10058264All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2424Open in IMG/M
3300005557|Ga0066704_10244919All Organisms → cellular organisms → Bacteria → Acidobacteria1217Open in IMG/M
3300005591|Ga0070761_10859106Not Available572Open in IMG/M
3300005712|Ga0070764_10493874Not Available735Open in IMG/M
3300005874|Ga0075288_1025182Not Available857Open in IMG/M
3300005879|Ga0075295_1037245All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300006028|Ga0070717_10357613Not Available1306Open in IMG/M
3300006052|Ga0075029_100446859Not Available847Open in IMG/M
3300006052|Ga0075029_100660424Not Available703Open in IMG/M
3300006086|Ga0075019_10004728All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7762Open in IMG/M
3300006086|Ga0075019_10559434All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300006086|Ga0075019_10861180Not Available580Open in IMG/M
3300006162|Ga0075030_101622384Not Available506Open in IMG/M
3300006173|Ga0070716_100568918All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300006174|Ga0075014_100219761Not Available967Open in IMG/M
3300006174|Ga0075014_100669556All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300009089|Ga0099828_10792988Not Available849Open in IMG/M
3300009520|Ga0116214_1004256All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia5201Open in IMG/M
3300009524|Ga0116225_1119639All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1212Open in IMG/M
3300009525|Ga0116220_10005989All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4810Open in IMG/M
3300009623|Ga0116133_1073883Not Available853Open in IMG/M
3300009624|Ga0116105_1109555All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300009628|Ga0116125_1002040All Organisms → cellular organisms → Bacteria → Acidobacteria7798Open in IMG/M
3300009638|Ga0116113_1167718Not Available556Open in IMG/M
3300009700|Ga0116217_10643974Not Available658Open in IMG/M
3300009824|Ga0116219_10590183Not Available611Open in IMG/M
3300009839|Ga0116223_10184342Not Available1282Open in IMG/M
3300010046|Ga0126384_11818513Not Available579Open in IMG/M
3300010048|Ga0126373_11427436Not Available758Open in IMG/M
3300010048|Ga0126373_12863507Not Available538Open in IMG/M
3300010358|Ga0126370_10632058Not Available929Open in IMG/M
3300010358|Ga0126370_10699517Not Available890Open in IMG/M
3300010359|Ga0126376_12604818All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300010361|Ga0126378_13440444Not Available502Open in IMG/M
3300010371|Ga0134125_10912865All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300010376|Ga0126381_100777744All Organisms → cellular organisms → Bacteria → Acidobacteria1373Open in IMG/M
3300010379|Ga0136449_100155123All Organisms → cellular organisms → Bacteria4479Open in IMG/M
3300012349|Ga0137387_10396750All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_81000Open in IMG/M
3300012350|Ga0137372_10470520All Organisms → cellular organisms → Bacteria → Acidobacteria939Open in IMG/M
3300012354|Ga0137366_10175761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1607Open in IMG/M
3300012354|Ga0137366_10449912Not Available934Open in IMG/M
3300012357|Ga0137384_11035784Not Available659Open in IMG/M
3300012469|Ga0150984_123229318Not Available734Open in IMG/M
3300012492|Ga0157335_1002000Not Available1183Open in IMG/M
3300012971|Ga0126369_10210863All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1881Open in IMG/M
3300012971|Ga0126369_11491523Not Available766Open in IMG/M
3300014164|Ga0181532_10000071All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae97746Open in IMG/M
3300014165|Ga0181523_10092255All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1825Open in IMG/M
3300014169|Ga0181531_10881031Not Available560Open in IMG/M
3300014200|Ga0181526_10445502Not Available821Open in IMG/M
3300014654|Ga0181525_10198932All Organisms → cellular organisms → Bacteria → Acidobacteria1095Open in IMG/M
3300014657|Ga0181522_10803704Not Available577Open in IMG/M
3300014969|Ga0157376_10790135All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300015262|Ga0182007_10187259Not Available718Open in IMG/M
3300016319|Ga0182033_10736860Not Available865Open in IMG/M
3300017822|Ga0187802_10450569Not Available510Open in IMG/M
3300017932|Ga0187814_10343072Not Available576Open in IMG/M
3300017942|Ga0187808_10313872All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300017943|Ga0187819_10173802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1278Open in IMG/M
3300017948|Ga0187847_10045678All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2525Open in IMG/M
3300017948|Ga0187847_10741545Not Available554Open in IMG/M
3300017955|Ga0187817_10521529All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300017961|Ga0187778_10021213All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3985Open in IMG/M
3300017961|Ga0187778_10107989All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300017961|Ga0187778_10193438All Organisms → cellular organisms → Bacteria → Acidobacteria1295Open in IMG/M
3300017972|Ga0187781_10471243Not Available900Open in IMG/M
3300017972|Ga0187781_11324912Not Available531Open in IMG/M
3300017973|Ga0187780_10466811All Organisms → cellular organisms → Bacteria → Acidobacteria899Open in IMG/M
3300017975|Ga0187782_10651776Not Available810Open in IMG/M
3300018006|Ga0187804_10013791All Organisms → cellular organisms → Bacteria2829Open in IMG/M
3300018006|Ga0187804_10457689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345570Open in IMG/M
3300018007|Ga0187805_10093155Not Available1361Open in IMG/M
3300018038|Ga0187855_10169390All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300018046|Ga0187851_10054138All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2608Open in IMG/M
3300018047|Ga0187859_10011474All Organisms → cellular organisms → Bacteria5068Open in IMG/M
3300018062|Ga0187784_10065870All Organisms → cellular organisms → Bacteria2938Open in IMG/M
3300018088|Ga0187771_10591950All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium940Open in IMG/M
3300020579|Ga0210407_10343266Not Available1168Open in IMG/M
3300021088|Ga0210404_10036621All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2233Open in IMG/M
3300021088|Ga0210404_10399325Not Available768Open in IMG/M
3300021088|Ga0210404_10586675Not Available633Open in IMG/M
3300021168|Ga0210406_10895114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300021168|Ga0210406_11093795Not Available587Open in IMG/M
3300021170|Ga0210400_10008512All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8387Open in IMG/M
3300021170|Ga0210400_11312319Not Available579Open in IMG/M
3300021171|Ga0210405_10248886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM1407Open in IMG/M
3300021180|Ga0210396_10108043All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2513Open in IMG/M
3300021401|Ga0210393_10232996All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1492Open in IMG/M
3300021403|Ga0210397_10090274All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2050Open in IMG/M
3300021403|Ga0210397_10281799All Organisms → cellular organisms → Bacteria → Acidobacteria1215Open in IMG/M
3300021404|Ga0210389_10625354All Organisms → cellular organisms → Bacteria → Acidobacteria845Open in IMG/M
3300021420|Ga0210394_11031409All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300021559|Ga0210409_10221025All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1720Open in IMG/M
3300021559|Ga0210409_11021171All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300021559|Ga0210409_11409387Not Available573Open in IMG/M
3300024220|Ga0224568_1038566Not Available517Open in IMG/M
3300025412|Ga0208194_1037268Not Available761Open in IMG/M
3300025414|Ga0208935_1029580All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300025434|Ga0208690_1010311All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1913Open in IMG/M
3300025612|Ga0208691_1012539All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2102Open in IMG/M
3300025929|Ga0207664_10914975Not Available787Open in IMG/M
3300025929|Ga0207664_11517733All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300025939|Ga0207665_11165401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300026215|Ga0209849_1013129All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1365Open in IMG/M
3300026333|Ga0209158_1084922Not Available1228Open in IMG/M
3300026490|Ga0257153_1092205Not Available604Open in IMG/M
3300027076|Ga0208860_1034872All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300027497|Ga0208199_1021912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1426Open in IMG/M
3300027568|Ga0208042_1119306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300027604|Ga0208324_1000925All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis11888Open in IMG/M
3300027879|Ga0209169_10387572Not Available735Open in IMG/M
3300027889|Ga0209380_10232922All Organisms → cellular organisms → Bacteria → Acidobacteria1081Open in IMG/M
3300027898|Ga0209067_10182999All Organisms → cellular organisms → Bacteria → Acidobacteria1122Open in IMG/M
3300027905|Ga0209415_10047721All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5594Open in IMG/M
3300027911|Ga0209698_10135062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2033Open in IMG/M
3300028792|Ga0307504_10023392All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1563Open in IMG/M
3300029911|Ga0311361_10703923All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300029944|Ga0311352_10751888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300029999|Ga0311339_10961102Not Available805Open in IMG/M
3300030053|Ga0302177_10078012All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1948Open in IMG/M
3300030707|Ga0310038_10094873All Organisms → cellular organisms → Bacteria → Acidobacteria1571Open in IMG/M
3300031184|Ga0307499_10333725Not Available509Open in IMG/M
3300031231|Ga0170824_104600854Not Available859Open in IMG/M
3300031231|Ga0170824_122793505All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300031239|Ga0265328_10173565All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300031249|Ga0265339_10076980All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300031344|Ga0265316_10132868All Organisms → cellular organisms → Bacteria1873Open in IMG/M
3300031715|Ga0307476_10560644Not Available847Open in IMG/M
3300031715|Ga0307476_10809982All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300031720|Ga0307469_10466829All Organisms → cellular organisms → Bacteria → Acidobacteria1097Open in IMG/M
3300031754|Ga0307475_10015940All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5155Open in IMG/M
3300031754|Ga0307475_10022576All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4450Open in IMG/M
3300031754|Ga0307475_11511386Not Available515Open in IMG/M
3300031954|Ga0306926_11084616All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300032076|Ga0306924_11406541Not Available744Open in IMG/M
3300032160|Ga0311301_10323569All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2443Open in IMG/M
3300032770|Ga0335085_11176553Not Available817Open in IMG/M
3300032892|Ga0335081_10049187All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6623Open in IMG/M
3300032892|Ga0335081_11106372All Organisms → cellular organisms → Bacteria → Acidobacteria912Open in IMG/M
3300032897|Ga0335071_10011693All Organisms → cellular organisms → Bacteria → Acidobacteria8969Open in IMG/M
3300032897|Ga0335071_10690723Not Available970Open in IMG/M
3300032897|Ga0335071_11072856All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300033134|Ga0335073_10571897All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300033887|Ga0334790_158924Not Available674Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.58%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.61%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.62%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.96%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.30%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment5.30%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.64%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.97%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.97%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.31%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.99%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.99%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.99%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.32%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.32%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.32%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.32%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.32%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.32%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.66%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.66%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.66%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.66%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.66%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.66%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012492Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610Host-AssociatedOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024220Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5EnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300027076Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)EnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
NODE_064039643300000156Sugar Cane Bagasse Incubating BioreactorQTGIRAFCAEEDAVVRVDPAGVGSSTEAGILTFNPLNQ*
JGI1027J11758_1265184513300000789SoilPMILNQTGARAFCTEQDAVVRVDPAGVCSNTEAGILTFNALNQ*
JGI12627J18819_1002825343300001867Forest SoilVPITINQTGLRGFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ*
Ga0063454_10176101713300004081SoilINQTGLRGFCSEEDAVLRVDPAGVCSNTEAGVLTFNPLNQ*
Ga0062386_10038878613300004152Bog Forest SoilNQTGIRGFCAEEDAVVRVDPAGVCSVTEAGILVFNPLNQ*
Ga0062386_10107437213300004152Bog Forest SoilNQTGIRGFCAEEDAVVRVDPAGVCSVTEAGILTFNPLNQ*
Ga0073909_1044963023300005526Surface SoilGVQAIPLSINQTGIRAFCAEEDAVVRVDPAGICSTDEAGILTFNPLNQ*
Ga0070733_1005826413300005541Surface SoilVVAIPLQINQTGIRAFCAEEDAVVRVDPAGVCSTTEAGILPFNPLNQ*
Ga0066704_1024491933300005557SoilVRAFCAEQDAVVRVDPAGVCSNTEAGILTFNPLNQ*
Ga0070761_1085910613300005591SoilNQTGIRGFCAEEDAVIRVDPAGACSNTEAGIQGFNPLNQ*
Ga0070764_1049387423300005712SoilSVPLSINQTGIRGFCAEEDAVIRVDPAGACSNTEAGIQGFNPLNQ*
Ga0075288_102518213300005874Rice Paddy SoilTINQTGIRAFCAEEDAVVRVDPAGACSNTEAGILVFNPLNQ*
Ga0075295_103724513300005879Rice Paddy SoilVNQTGIRAFCAEEDAVIRVDPAGVCSATEAGILTFNPLNQ*
Ga0070717_1035761323300006028Corn, Switchgrass And Miscanthus RhizosphereVPITINQTGIRAFCAEEDAVVRVDPAGVCANTEAGILTFNPLNQ*
Ga0075029_10044685923300006052WatershedsVPITINQTGIRAFCAEEDGVVRVDPAGACANTEAGVLTFNPLNQ*
Ga0075029_10066042413300006052WatershedsRGFCAEEDAVVRVDPAGVCSNTEAGIRTFNPLNQ*
Ga0075019_1000472813300006086WatershedsRGFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ*
Ga0075019_1055943413300006086WatershedsVKAVPITINQTGIRGFCAEEDAVVRVDPAGVCSNTEAGIRIFNPLNQ*
Ga0075019_1086118013300006086WatershedsNQTGIRAFCAEEDAVVRVDPAGVCSNTEAGIRTFNPLNQ*
Ga0075030_10162238413300006162WatershedsINQTGIRGFCAEEDAVIRVDPAGVCSNTEAGIQTFNPLNQ*
Ga0070716_10056891813300006173Corn, Switchgrass And Miscanthus RhizosphereTGLRGFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ*
Ga0075014_10021976123300006174WatershedsIQAAPITVNQTGIRAFCAEEDAVIRVDPAGICSNTEAGIQTFNPLNQ*
Ga0075014_10066955613300006174WatershedsTGLRAFCAEEDAVVRVDPAGVCSTTEAGVLTFNPLNQ*
Ga0099828_1079298823300009089Vadose Zone SoilQTGIKGFCAEEDAVLRADAAGVCSATEAGILGFNPLNQ*
Ga0116214_100425673300009520Peatlands SoilVNQTGIRAFCAEEDGVVRVDQGGKCGTTEPTVLTFNPLNQ*
Ga0116225_111963913300009524Peatlands SoilIKAIPLSVNQTGIRGFCAEEDAVIRVDPAGACSSAEAALLAFNPLNQ*
Ga0116220_1000598913300009525Peatlands SoilIRAFCAEEDGVVRVDQGGKCGTTEPTVLTFNPLNQ*
Ga0116133_107388323300009623PeatlandNQTGIRAFCAEEDAVVRVDPAGVCSTTEAGVLTFNPLNQ*
Ga0116105_110955523300009624PeatlandRAFCAEEDAVVRVDPAGVCSTTEAGVLTFNPLNQ*
Ga0116125_100204093300009628PeatlandVKGVPITINQTGIRAFCAEEDAVVRVDPAGVCSTTEAGIRVFNPLNQ*
Ga0116113_116771813300009638PeatlandKGVPITINQTGIRAFCAEEDAVVRVDPAGACSNAEGTILGFNPLNQ*
Ga0116217_1064397413300009700Peatlands SoilNQTGIRAFCAEEDAVVRVDPAGACSTAEATILTFNPLNQ*
Ga0116219_1059018323300009824Peatlands SoilGIRGFCAEEDAVVRVDPAGACSNTEAAILAFNPLNQ*
Ga0116223_1018434213300009839Peatlands SoilKAIPLSVNQTGIRGFCAEEDAVVRVDPGGACSSAEATVLTFNPLNQ*
Ga0126384_1181851313300010046Tropical Forest SoilAAPITVNQTGIRAFCAIEDALIRVDPAGVCSNTEAGIVTFNPLNQ*
Ga0126373_1142743623300010048Tropical Forest SoilRGFCAEEDGVVRVDPAGKCSTAEATILTFNPLNQ*
Ga0126373_1286350713300010048Tropical Forest SoilVPITVNQTGIRAFCAEEDGVVRVDPAGACSNTEAGILVFNPLNQ*
Ga0126370_1063205813300010358Tropical Forest SoilIRAFCAEEDAVVRVDPAGACGTDEATILTFDPLNQ*
Ga0126370_1069951713300010358Tropical Forest SoilNQTGIRAFCAEEDAVVRVDPAGLCSNTEAGILTFNSLNQQATV*
Ga0126376_1260481813300010359Tropical Forest SoilVQATPITINQTGIRGFCAEEDAVVRVDPAGKCSNTEAGVLTFNPLNQ*
Ga0126378_1344044423300010361Tropical Forest SoilLAVPITINQTGIRAFCAEEDAVVRVDPAGVCSDTETGVLTFNPLNQ*
Ga0134125_1091286523300010371Terrestrial SoilPLTLNQTGIRGFCAEEDAVLRVDPAGVCSTTEAGILAFNPLNQ*
Ga0126381_10077774423300010376Tropical Forest SoilTGIRAFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ*
Ga0136449_10015512313300010379Peatlands SoilGIRGFCAEEDAVIRVDPLGVCSNTEAGIAAFNPLNQ*
Ga0137387_1039675013300012349Vadose Zone SoilGCCAEEDAVVRVDPAGVCGSPNPSEGAVLGFNPLTQ*
Ga0137372_1047052023300012350Vadose Zone SoilIRGFCAEEDAVLRVDPAGVCGSPNPAEGTVLTFNPLNQ*
Ga0137366_1017576113300012354Vadose Zone SoilNQTGLRAFCAEEDAVVRVDPAGVCSNTEAGILTFNPLNQ*
Ga0137366_1044991223300012354Vadose Zone SoilGLRAFCAEEDAVVRVDPAGVCSNTEAGILTFNPLNQ*
Ga0137384_1103578413300012357Vadose Zone SoilGKPISKNQTGVKAFCAEEDALLRVDPAGLCSATEAGIQGFNPLNQ*
Ga0150984_12322931813300012469Avena Fatua RhizosphereIRAFCAEEDAVVRVDPAGVGSATEAGILAFNPLNQ*
Ga0157335_100200023300012492Arabidopsis RhizospherePITINQTGIRAFCAEEDAVVRVDPAGVCSNTEAGVLTFNPLNQ*
Ga0126369_1021086313300012971Tropical Forest SoilRAFCTEQDSVIRVDPAGACSNTEAGILTFNPLNQ*
Ga0126369_1149152313300012971Tropical Forest SoilIVGVPMTVNQTGIRAFCAEEDAVIRVDPAGVCSNTEAGILTFNPLNQ*
Ga0181532_10000071883300014164BogNQTGIRAFCAEEDAVVRVDPAGACSSVEATVLTFNPLNQ*
Ga0181523_1009225543300014165BogIRAFCAEEDAVVRVDPAGACSSVEATVLTFNPLNQ*
Ga0181531_1088103113300014169BogNTINQTGIRGFCAEEDAVVRVDPAGVCSITEAGVLVFNPLNQ*
Ga0181526_1044550223300014200BogVPNTINQTGIRGFCAEEDAVVRVDPAGVCSLTEAGILVFNPLNQ*
Ga0181525_1019893213300014654BogKAVPNTINQTGIRGFCAEEDAVVRVDPAGVCSLTEAGILTFNPLNQ*
Ga0181522_1080370413300014657BogIRGFCAEEDAVVRVDPAGVCSLTEAGILTFNPLNQ*
Ga0157376_1079013523300014969Miscanthus RhizosphereLAINQTGIRAFCAEEDAVVRVDPASACSNSEGGILTFNPLNQ*
Ga0182007_1018725923300015262RhizosphereGIRAFCAEEDAVVRVDPAGVCSATEAGILTFNPLNQ*
Ga0182033_1073686013300016319SoilNQTGIRAFCAEEDAVVRVDPAGVCANTEAGVLTFNPLNQ
Ga0187802_1045056923300017822Freshwater SedimentTGIRAFCAEEDAVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0187814_1034307213300017932Freshwater SedimentPITINQTGIRAFCAEEDAVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0187808_1031387213300017942Freshwater SedimentINQTGIRGFCAEEDAVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0187819_1017380213300017943Freshwater SedimentINQTGIRAFCAEEDAVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0187847_1004567813300017948PeatlandIRGFCAEEDAVVRVDPAGVCSVTEAGILVFNPLNQ
Ga0187847_1074154513300017948PeatlandNTINQTGIRGFCAEEDAVVRVDPAGVCSLTEAGILVFNPLNQ
Ga0187817_1052152913300017955Freshwater SedimentPTTVNQTGIRAFCSEEDAVVRVDAAGACSNTEAGVLTFNPLNQ
Ga0187778_1002121313300017961Tropical PeatlandAVPITINQTGIRAFCAEEDAVVRVDPKGACSNVEATILTFNPLNQ
Ga0187778_1010798933300017961Tropical PeatlandTINQTGIRAFCAEEDAVVRVDPKGACSNVEATILTFNPLNQ
Ga0187778_1019343833300017961Tropical PeatlandVMLAVPLTINHTGIRAFCAEEDAVVRVDPAGACSNTEAGVLTFSPLNQ
Ga0187781_1047124313300017972Tropical PeatlandASPLTINQTGIRGFCAMEDAVVRVDPAGVCSDTEAGVILFNPLNQ
Ga0187781_1132491213300017972Tropical PeatlandQTGIRAFCAEEDAVVRVDPAGVCSNTEAGILTFNPLNQ
Ga0187780_1046681123300017973Tropical PeatlandAQPVTINQTGIRAFCAEEDAVVRVDPLGVCSNDEAGILAFNPLNQ
Ga0187782_1065177613300017975Tropical PeatlandNQTGIRAFCAEEDAVVRVDPAGVCSNTEAGILTFNPLNQ
Ga0187804_1001379113300018006Freshwater SedimentVPITINQTGIRAFCAEEDAVVRVDPAGKCSNTEAGVLTFSPLNQ
Ga0187804_1045768913300018006Freshwater SedimentLRAFCAEEDAVVRVDPAGVCSLTEAGILTFNPLNQ
Ga0187805_1009315513300018007Freshwater SedimentINQTGIRAFCAEKDAVVRVDPAGACSSAEATILTFNPLNQ
Ga0187855_1016939013300018038PeatlandGIRAFCAEEDAVVRVDPAGVCSTTEAGIRVFNPLNQ
Ga0187851_1005413843300018046PeatlandVPNTINQTGIRGFCAEEDAVVRVDPAGVCSLTEAGILVFNPLNQ
Ga0187859_1001147483300018047PeatlandINQTGIRAFCSEEDAVVRVDPAGVCSTTEAGILTFNPLNQ
Ga0187784_1006587023300018062Tropical PeatlandMPAGPVAINQTGVRAFCAEEDSVVRVDPAGAGFNTEAGVLTFNPLHQ
Ga0187771_1059195023300018088Tropical PeatlandNQTGIRAFCSEEDAVVRVDPAGSCSNDENGILPFNPLNQ
Ga0210407_1034326633300020579SoilNQTGIRGFCAEEDAVIRVDPAGLCSNTEAGIQTFNPLNQ
Ga0210404_1003662113300021088SoilISAVPLSINQTGIRAFCAEEDAVVRVDPLGACSNAEATILTFNPLNQ
Ga0210404_1039932523300021088SoilINQTGIRGFCAEEDAVVRVDPAGACSTAEATILTFNPLNQ
Ga0210404_1058667513300021088SoilTINQTGVRGFCAEEDAVVRVAPAGVCSNTEAGIRTFNPLNQ
Ga0210406_1089511413300021168SoilVSAVPITINQTGLRGFCAEEDAVVRVDPAGVCSLTEAGILTFNPLNQ
Ga0210406_1109379513300021168SoilPITVNQTGIRAFCAEEDAVIRVDPAGICSNTEAGIQTFNPLNQ
Ga0210400_1000851213300021170SoilTGIRAFCAEEDAVVRVDPAGVCSNTEGGILPFNPLNQ
Ga0210400_1131231923300021170SoilSHNQTGIRGFCAEEDAVIRVDPAGVCSATEGGIAGFNPLNQ
Ga0210405_1024888613300021171SoilQTGIRAFCGEEDGVVRVDPAGACSSVEATMLTFNPLNQ
Ga0210396_1010804313300021180SoilVPLSINQTGIRGFCAEEDAVIRVDPAGVCSNTEAGIQTFNPLNQ
Ga0210393_1023299613300021401SoilGIRAFCAEEDAVVRVDPAGKCSATEAGILAFNPLNQ
Ga0210397_1009027413300021403SoilLAINQTGSRGFCAEEDAVVRVDPAGACSTAEATILTFNPLNQ
Ga0210397_1028179913300021403SoilGIRGFCAEEDAVVRVDPAGACSNTEAGILVFNPLNQ
Ga0210389_1062535423300021404SoilVVAVPLSINQTGIRGFCAEEDAVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0210394_1103140923300021420SoilTGIRGFCAEEDAVVRVDPAGACSTAEATILTFNPLNQ
Ga0210409_1022102533300021559SoilLNETGVRAFCAEQDAVVRVDPAGVCSNTEAGILTFNPLNQ
Ga0210409_1102117113300021559SoilNQTGIRGFCAEEDAVVRVDPAGACSTAEATILTFNPLNQ
Ga0210409_1140938713300021559SoilTPLAINQTGIRAFCAEEDAVVRVDPNGACSSVEATVLTFNPLNQ
Ga0224568_103856613300024220Plant LitterVRGVPLSINQTGIRGFCAEEDAVIRVDPAGACSNTEAGILAFNPLNQ
Ga0208194_103726823300025412PeatlandTINQTGIRGFCAEEDAVVRVDPAGVCSVTEAGILVFNPLNQ
Ga0208935_102958013300025414PeatlandKGVPITINQTGIRAFCAEEDAVVRVDPAGVCSTTEAGVLTFNPLNQ
Ga0208690_101031133300025434PeatlandKGVPITINQTGIRAFCAEEDAVVRVDPAGVCSTTEAGIRVFNPLNQ
Ga0208691_101253933300025612PeatlandAIPLSVNQTGIRGFCAEEDAVIRVDPAGVCSSTEAGILGFNPLNQ
Ga0207664_1091497513300025929Agricultural SoilTPITINQTGIRGFCAEEDSVVRVDAAGKCSNTEAGVLTFNPLNQ
Ga0207664_1151773323300025929Agricultural SoilTVNQTGIRAFCAEEDAVIRVDPAGVCSNTEAGIPIFNPLNQ
Ga0207665_1116540123300025939Corn, Switchgrass And Miscanthus RhizosphereINQTGLRGFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ
Ga0209849_101312913300026215SoilNQTGIRAFCSEEDAVVRVDPAGVCSVTEAGVLAFNPLNQ
Ga0209158_108492223300026333SoilTVAAVPITINQTGLRAFCAEEDAVVRVDPAGVCSLTEAGVLTFNPLNQ
Ga0257153_109220513300026490SoilVNQTGIKGFCAEEDGVVRVDTVTNVCSSTEAGVLGFNPLNN
Ga0208860_103487213300027076Forest SoilQAAPITVNQTGIRAFCAEEDAVIRVDPAGICSNTEAGIQTFNPLNQ
Ga0208199_102191223300027497Peatlands SoilVGYVINAVPITVNQTGIRAFCAEEDGVVRVDQGGKCGTTEPTVLTFNPLNQ
Ga0208042_111930623300027568Peatlands SoilYVINAAPITVNQTGIRAFCAEEDGVVRVDQGGKCGTTEPTVLTFNPLNQ
Ga0208324_1000925153300027604Peatlands SoilINAVPITVNQTGIRAFCAEEDGVVRVDQGGKCGTTEPTVLTFNPLNQ
Ga0209169_1038757223300027879SoilSVPLSINQTGIRGFCAEEDAVIRVDPAGACSNTEAGIQGFNPLNQ
Ga0209380_1023292223300027889SoilIRGFCAEEDAVVRVDPAGVCSTTEAGILPFNPLNQ
Ga0209067_1018299923300027898WatershedsALAVPITINQTGIRAFCAEEDGVVRVDPAGACANTEAGVLTFNPLNQ
Ga0209415_1004772113300027905Peatlands SoilIRGFCAEEDAVVRVDPAGACSNTEAAILAFNPLNQ
Ga0209698_1013506223300027911WatershedsLAVPISINQTGIRAFCSEEDAVVHVDPAGACSNDEAGILTFVPLNQ
Ga0307504_1002339233300028792SoilGVRAFCAEQDAVVRVDPAGVCSNTEAGILTFNPLNQ
Ga0311361_1070392323300029911BogTINQTGIRAFCAEEDAVVRVDPAGVCSTTEAGVLTFNPLNQ
Ga0311352_1075188823300029944PalsaIKINQTGIRAFCAEEDAVVRVDPLGVCSKTEAGVLGFNPLNQ
Ga0311339_1096110213300029999PalsaFTIKGVPNTINQTGIRAFCAEEDAVVRVDPAGACSSTEAGILTFNPLNQ
Ga0302177_1007801213300030053PalsaVPLSINQTGIRGFCAEEDAVVRVDPAGVCSNTEAGILAFNPLNQ
Ga0310038_1009487313300030707Peatlands SoilAVPLSINQTGIRGFCAEEDAVVRVDPAGACSNTEAGILAFNPLNQ
Ga0307499_1033372513300031184SoilVPITINQTGLRGFCSEEDAVVRVDPAGVCSDTEAGVLTFNPLNQ
Ga0170824_10460085423300031231Forest SoilAGIRGFCAEEDAVVRVDPAGICGTPNPAEGTVLTFNPLNQ
Ga0170824_12279350513300031231Forest SoilRGFCAEEDGVLRVDPAGVCGSPNPSEGAVLGFNPLNQ
Ga0265328_1017356523300031239RhizosphereTGIRGFCAEEDAVVRVDPAGVCSNTEAGVLVFNPLNQ
Ga0265339_1007698013300031249RhizosphereSVNQTGIRGFCAVEDAVIRVDPAGACSNTEAGIVVFNPLNQ
Ga0265316_1013286813300031344RhizosphereITINQTGIRGFCAEEDAVVRVDPLGKCSNSEAGVLTFNPLNQ
Ga0307476_1056064423300031715Hardwood Forest SoilITVNQTGIRAFCAEEDAVIRVDPAGICSNTEAGIQTFNPLNQ
Ga0307476_1080998213300031715Hardwood Forest SoilVKAVPITINQTGLRGFCAEEDAVVRVDPAGVCSTTEAGILTFNPLNQ
Ga0307469_1046682913300031720Hardwood Forest SoilARPLILNETGVRAFCAEQDAVVRVDPAGVCSNTEAGILTFNPLNQ
Ga0307475_1001594073300031754Hardwood Forest SoilGIRAFCAEEDAVIRVDPAGICSNTEAGIQTFNPLNQ
Ga0307475_1002257613300031754Hardwood Forest SoilVRAFCSIEDAVVRVDPAGVASNTEAGCPVFNPLNQ
Ga0307475_1151138613300031754Hardwood Forest SoilNQTGIRAFCAEEDAVVRVDPAGACSNVEATILTFNPLNQ
Ga0306926_1108461613300031954SoilAPISVNQTGKRAFCAEEDALIRVDPAGVCSNTEAGIPSFNPLNQ
Ga0306924_1140654113300032076SoilTGIRAFCAEEDAVVRVDPAGVCANTEAGILTFNPLNQ
Ga0311301_1032356953300032160Peatlands SoilQTGIRGFCAEEDAVIRVDPLGVCSNTEAGIAAFNPLNQ
Ga0335085_1117655313300032770SoilQTGIRAFCAEEDAVVRVDPAGVCSNTEAGVLTFNPLNQN
Ga0335081_1004918713300032892SoilGIRAFCAEEDAVVRVDPAGACSNAEATILTFNPLNQ
Ga0335081_1110637213300032892SoilINQTGIRAFCAEEDGVVRVDPAGACSNTEAGVLTFNPLNQ
Ga0335071_1001169313300032897SoilGIRAFCAEEDAVIRVDPVGKCSNSEAGILTFNPLNQ
Ga0335071_1069072313300032897SoilVIQATPITINQTGLRGFCAEEDSVVRVDAAGKCSNTEAGVLTFNPLNQ
Ga0335071_1107285613300032897SoilLTINTTGIRGFCAEEDGVVRVDPAGKCSNTEAGILGFNPLNQ
Ga0335073_1057189713300033134SoilIRGFCAEEDGVVRVDPAGKCSNTEAGILGFNPLNQ
Ga0334790_158924_561_6743300033887SoilTGIRGFCAEEDAVVRVDPAGVCSATEAGVLAFNPLNQ


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