Metagenome / Metatranscriptome Family F046517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	48 residues
Representative Sequence	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Number of Associated Samples	95
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.31 %
% of genes near scaffold ends (potentially truncated)	98.01 %
% of genes from short scaffolds (< 2000 bps)	91.39 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.914 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.815 % of family members)
Environment Ontology (ENVO)	Unclassified (42.384 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.861 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.26% β-sheet: 13.04% Coil/Unstructured: 58.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF01323	DSBA	11.92
PF04392	ABC_sub_bind	7.95
PF00892	EamA	2.65
PF03401	TctC	1.99
PF01569	PAP2	1.99
PF00528	BPD_transp_1	1.99
PF00126	HTH_1	1.99
PF13751	DDE_Tnp_1_6	1.32
PF02515	CoA_transf_3	1.32
PF13505	OMP_b-brl	1.32
PF01381	HTH_3	1.32
PF04234	CopC	1.32
PF02371	Transposase_20	1.32
PF08818	DUF1801	1.32
PF00903	Glyoxalase	1.32
PF05598	DUF772	1.32
PF13817	DDE_Tnp_IS66_C	0.66
PF01380	SIS	0.66
PF07366	SnoaL	0.66
PF07883	Cupin_2	0.66
PF14714	KH_dom-like	0.66
PF01699	Na_Ca_ex	0.66
PF02738	MoCoBD_1	0.66
PF02735	Ku	0.66
PF02796	HTH_7	0.66
PF00296	Bac_luciferase	0.66
PF12852	Cupin_6	0.66
PF09265	Cytokin-bind	0.66
PF02798	GST_N	0.66
PF03992	ABM	0.66
PF05163	DinB	0.66
PF13177	DNA_pol3_delta2	0.66
PF06078	DUF937	0.66
PF02922	CBM_48	0.66
PF03779	SPW	0.66
PF09694	Gcw_chp	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.95
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.99
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.32
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	1.32
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.32
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.32
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.32
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.32
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.66
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.66
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.66
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.66
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.66
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.66
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.91 %
Unclassified	root	N/A	37.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.91 %
Unclassified	root	N/A	37.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.91 %
Unclassified	root	N/A	37.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.06 %
Unclassified	root	N/A	37.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.99 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.32 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.97 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Proteobacteria bacterium SG_bin6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.31 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.65 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	1.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.66 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.66 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.66 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.66 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.66 %
unclassified Caulobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales	0.66 %
Proteobacteria bacterium SG_bin6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.31 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.99 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Rhodoligotrophos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Caulobacterales bacterium 32-67-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-67-6	0.66 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.66 %
Proteobacteria bacterium SG_bin6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.31 %
Hyphomicrobium zavarzinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	1.99 %
unclassified Zoogloea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea → unclassified Zoogloea	1.99 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.66 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
Rhodoligotrophos defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	0.66 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.66 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Caulobacterales bacterium 32-67-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-67-6	0.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.66 %
Proteobacteria bacterium SG_bin6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.31 %
Zoogloea sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea → unclassified Zoogloea → Zoogloea sp.	1.99 %
Hyphomicrobium zavarzinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	1.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Mesorhizobium sp. F7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. F7	0.66 %
Bradyrhizobium sp. 174	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	0.66 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.66 %
Bradyrhizobium sp. BTAi1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	0.66 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.66 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.66 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.66 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.66 %
Rhodoligotrophos defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	0.66 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Caulobacterales bacterium 32-67-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-67-6	0.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.66 %
Proteobacteria bacterium SG_bin6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1029573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10028196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1522	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10047020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10169050	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300000698\|JGI12489J11917_101745	Not Available	796	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10007339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2601	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10102783	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1026689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	612	Open in IMG/M
3300000863\|JGI12412J12824_105473	Not Available	508	Open in IMG/M
3300004082\|Ga0062384_100071699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1761	Open in IMG/M
3300005332\|Ga0066388_100472328	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300005332\|Ga0066388_100761710	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300005332\|Ga0066388_104234205	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300005332\|Ga0066388_105033345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	671	Open in IMG/M
3300005332\|Ga0066388_106607652	Not Available	584	Open in IMG/M
3300005332\|Ga0066388_107920620	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005363\|Ga0008090_15899692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	943	Open in IMG/M
3300005439\|Ga0070711_101589644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300005713\|Ga0066905_100496917	Not Available	1013	Open in IMG/M
3300005764\|Ga0066903_102549517	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005764\|Ga0066903_105175565	Not Available	690	Open in IMG/M
3300005764\|Ga0066903_105801806	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005764\|Ga0066903_107677287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300005764\|Ga0066903_107846295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea → unclassified Zoogloea → Zoogloea sp.	548	Open in IMG/M
3300005764\|Ga0066903_108073980	Not Available	539	Open in IMG/M
3300005764\|Ga0066903_109061301	Not Available	503	Open in IMG/M
3300006041\|Ga0075023_100149157	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300006102\|Ga0075015_100622450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	634	Open in IMG/M
3300006162\|Ga0075030_101144937	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006175\|Ga0070712_101002998	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006845\|Ga0075421_100407631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300006854\|Ga0075425_102440742	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006871\|Ga0075434_101696165	Not Available	640	Open in IMG/M
3300006954\|Ga0079219_10018205	Not Available	2542	Open in IMG/M
3300009177\|Ga0105248_13438056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	503	Open in IMG/M
3300009816\|Ga0105076_1005328	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2062	Open in IMG/M
3300009826\|Ga0123355_11551865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300010043\|Ga0126380_10612888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	859	Open in IMG/M
3300010047\|Ga0126382_10452264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300010048\|Ga0126373_10610686	Not Available	1144	Open in IMG/M
3300010048\|Ga0126373_10762793	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300010048\|Ga0126373_10913105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	942	Open in IMG/M
3300010048\|Ga0126373_11399263	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300010358\|Ga0126370_10658098	Not Available	914	Open in IMG/M
3300010358\|Ga0126370_11644464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	616	Open in IMG/M
3300010359\|Ga0126376_10154363	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300010360\|Ga0126372_12071966	Not Available	616	Open in IMG/M
3300010366\|Ga0126379_10920377	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300010366\|Ga0126379_10981660	Not Available	949	Open in IMG/M
3300010366\|Ga0126379_11049490	Not Available	920	Open in IMG/M
3300010376\|Ga0126381_101839374	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300010376\|Ga0126381_104649482	Not Available	529	Open in IMG/M
3300010398\|Ga0126383_12039788	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010868\|Ga0124844_1045563	Not Available	1510	Open in IMG/M
3300012971\|Ga0126369_10265071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-67-6	1699	Open in IMG/M
3300012971\|Ga0126369_10543926	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012971\|Ga0126369_11198066	Not Available	849	Open in IMG/M
3300012971\|Ga0126369_11257489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300012971\|Ga0126369_11271748	Not Available	826	Open in IMG/M
3300015372\|Ga0132256_101343594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	827	Open in IMG/M
3300016270\|Ga0182036_10234212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300016294\|Ga0182041_10124941	Not Available	1939	Open in IMG/M
3300016294\|Ga0182041_10269909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1395	Open in IMG/M
3300016319\|Ga0182033_10522464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300016341\|Ga0182035_10622285	Not Available	934	Open in IMG/M
3300016341\|Ga0182035_11009035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300016341\|Ga0182035_11515120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300016341\|Ga0182035_11708263	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300016357\|Ga0182032_10068729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2383	Open in IMG/M
3300016357\|Ga0182032_10925649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	742	Open in IMG/M
3300016357\|Ga0182032_11378687	Not Available	610	Open in IMG/M
3300016371\|Ga0182034_10857900	Not Available	779	Open in IMG/M
3300016371\|Ga0182034_11084307	Not Available	694	Open in IMG/M
3300016371\|Ga0182034_11466514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300016371\|Ga0182034_11806907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	539	Open in IMG/M
3300016387\|Ga0182040_10256750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300016404\|Ga0182037_10222959	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300016404\|Ga0182037_11190438	Not Available	669	Open in IMG/M
3300016422\|Ga0182039_10328270	Not Available	1277	Open in IMG/M
3300016422\|Ga0182039_10788491	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300016445\|Ga0182038_10130963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. F7	1882	Open in IMG/M
3300016445\|Ga0182038_10242201	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300016445\|Ga0182038_10688941	Not Available	889	Open in IMG/M
3300016445\|Ga0182038_10712498	Not Available	874	Open in IMG/M
3300016445\|Ga0182038_11554067	Not Available	595	Open in IMG/M
3300017943\|Ga0187819_10464787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea → unclassified Zoogloea → Zoogloea sp.	723	Open in IMG/M
3300017947\|Ga0187785_10475631	Not Available	617	Open in IMG/M
3300017955\|Ga0187817_10464118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea → unclassified Zoogloea → Zoogloea sp.	808	Open in IMG/M
3300017961\|Ga0187778_10395922	Not Available	905	Open in IMG/M
3300017966\|Ga0187776_10861575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300018029\|Ga0187787_10360966	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018089\|Ga0187774_10151054	Not Available	1218	Open in IMG/M
3300020581\|Ga0210399_10822171	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium SG_bin6	758	Open in IMG/M
3300021170\|Ga0210400_10501542	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300021361\|Ga0213872_10197068	Not Available	865	Open in IMG/M
3300021444\|Ga0213878_10146068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300021560\|Ga0126371_10978519	Not Available	988	Open in IMG/M
3300021560\|Ga0126371_12677728	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021560\|Ga0126371_13748686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	512	Open in IMG/M
3300025915\|Ga0207693_10806782	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025935\|Ga0207709_10289523	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300026860\|Ga0207823_114902	Not Available	522	Open in IMG/M
3300026910\|Ga0207840_1002694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2105	Open in IMG/M
3300026959\|Ga0207852_1004362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1651	Open in IMG/M
3300027003\|Ga0207722_1000673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4563	Open in IMG/M
3300027680\|Ga0207826_1021766	Not Available	1767	Open in IMG/M
3300027874\|Ga0209465_10021923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2949	Open in IMG/M
3300027874\|Ga0209465_10097400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300030878\|Ga0265770_1033893	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031231\|Ga0170824_116201339	Not Available	2059	Open in IMG/M
3300031446\|Ga0170820_14933271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	527	Open in IMG/M
3300031545\|Ga0318541_10786633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300031573\|Ga0310915_10253704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300031679\|Ga0318561_10483698	Not Available	681	Open in IMG/M
3300031682\|Ga0318560_10489564	Not Available	666	Open in IMG/M
3300031713\|Ga0318496_10352829	Not Available	812	Open in IMG/M
3300031719\|Ga0306917_10404777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1066	Open in IMG/M
3300031744\|Ga0306918_10051139	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300031768\|Ga0318509_10333101	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031771\|Ga0318546_11009526	Not Available	585	Open in IMG/M
3300031799\|Ga0318565_10099703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1392	Open in IMG/M
3300031821\|Ga0318567_10026449	All Organisms → cellular organisms → Bacteria	2860	Open in IMG/M
3300031833\|Ga0310917_10718059	Not Available	676	Open in IMG/M
3300031879\|Ga0306919_10885133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031879\|Ga0306919_11143849	Not Available	592	Open in IMG/M
3300031880\|Ga0318544_10284535	Not Available	641	Open in IMG/M
3300031890\|Ga0306925_10132525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2675	Open in IMG/M
3300031890\|Ga0306925_10904292	Not Available	908	Open in IMG/M
3300031890\|Ga0306925_11433200	Not Available	679	Open in IMG/M
3300031912\|Ga0306921_10040712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5245	Open in IMG/M
3300031912\|Ga0306921_10520591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1381	Open in IMG/M
3300031912\|Ga0306921_12602259	Not Available	522	Open in IMG/M
3300031912\|Ga0306921_12617903	Not Available	520	Open in IMG/M
3300031941\|Ga0310912_10494666	Not Available	953	Open in IMG/M
3300031942\|Ga0310916_10456046	Not Available	1089	Open in IMG/M
3300031945\|Ga0310913_10433472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	933	Open in IMG/M
3300031945\|Ga0310913_11071477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300031954\|Ga0306926_12458207	Not Available	572	Open in IMG/M
3300032035\|Ga0310911_10119193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1464	Open in IMG/M
3300032035\|Ga0310911_10148764	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300032042\|Ga0318545_10174588	Not Available	767	Open in IMG/M
3300032051\|Ga0318532_10351671	Not Available	523	Open in IMG/M
3300032094\|Ga0318540_10477856	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300032180\|Ga0307471_101800796	Not Available	764	Open in IMG/M
3300032261\|Ga0306920_100114643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3998	Open in IMG/M
3300032261\|Ga0306920_100469225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1869	Open in IMG/M
3300032261\|Ga0306920_102935442	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300032261\|Ga0306920_103544662	Not Available	576	Open in IMG/M
3300032261\|Ga0306920_104336325	Not Available	509	Open in IMG/M
3300033289\|Ga0310914_10732028	Not Available	886	Open in IMG/M
3300033289\|Ga0310914_10853720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	809	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.70%
Host-Associated	Host-Associated	5.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.73%
Plants	Host-Associated → Plants	4.64%
Aquatic	Environmental → Aquatic	3.97%
Arthropoda	Host-Associated → Arthropoda	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.64%
Freshwater	Environmental → Aquatic → Freshwater	1.99%
Sediment	Environmental → Aquatic → Sediment	1.99%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.87%
Loam	Environmental → Terrestrial → Soil → Loam	17.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.66%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.66%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.66%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000698	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000863	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10295731	3300000580	Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT*
AF_2010_repII_A1DRAFT_100281961	3300000597	Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASELRT*
AF_2010_repII_A1DRAFT_100470203	3300000597	Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALITAXSVHHFLVSESSTTK*
AF_2010_repII_A1DRAFT_101690501	3300000597	Forest Soil	EAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSTTK*
JGI12489J11917_1017454	3300000698	Tropical Forest Soil	ESIRRDLDAVKVAFGDTWQQSHLPEGYSALMTAYSVHHFFVSESSTTK*
AF_2010_repII_A001DRAFT_100073391	3300000793	Forest Soil	DASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK*
AF_2010_repII_A001DRAFT_101027831	3300000793	Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALITANSVHHFLVSESSTTK*
AF_2010_repII_A10DRAFT_10266891	3300000816	Forest Soil	RDLDAVKVAFGDAWQQSHLPEGYSALMTAHSVHHFLVSENSTTK*
JGI12412J12824_1054731	3300000863	Tropical Forest Soil	DLDAVKVAFGDTWQQSHLPEGYSALMTAYSVHHFFVSESSTTK*
Ga0062384_1000716991	3300004082	Bog Forest Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK*
Ga0066388_1004723281	3300005332	Tropical Forest Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTACSVHHFLVSESSTTEQFASEPRM*
Ga0066388_1007617101	3300005332	Tropical Forest Soil	KVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASELRT*
Ga0066388_1042342052	3300005332	Tropical Forest Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK*
Ga0066388_1050333452	3300005332	Tropical Forest Soil	DAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTIK*
Ga0066388_1066076521	3300005332	Tropical Forest Soil	VFESIWRDLDAVKVAFGDAWQRSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT*
Ga0066388_1079206201	3300005332	Tropical Forest Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVYHFLVSESSTTK*
Ga0008090_158996923	3300005363	Tropical Rainforest Soil	DLDAVKVAFGDAWQQSHLPEGYSALMTAHSVHHFLVSENSTTK*
Ga0070711_1015896442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT*
Ga0066905_1004969171	3300005713	Tropical Forest Soil	AFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSTTK*
Ga0066903_1025495171	3300005764	Tropical Forest Soil	AFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK*
Ga0066903_1051755651	3300005764	Tropical Forest Soil	RDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK*
Ga0066903_1058018061	3300005764	Tropical Forest Soil	VKEAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK*
Ga0066903_1076772873	3300005764	Tropical Forest Soil	KVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTN*
Ga0066903_1078462951	3300005764	Tropical Forest Soil	VDASALEVVFESVWGDLDAVKEAFGDGWQQSHLPEGYSALMTTYSVDHFLVSESSTTK*
Ga0066903_1080739802	3300005764	Tropical Forest Soil	APEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALITACSVHHFLVSESSTTK*
Ga0066903_1090613012	3300005764	Tropical Forest Soil	APEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEKFASELRT*
Ga0075023_1001491571	3300006041	Watersheds	VFESIWRDLDAVKVAFGDAWQQSHLPAEGYSALMTAYSVHHFLVSESSTTK*
Ga0075015_1006224502	3300006102	Watersheds	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSE
Ga0075030_1011449372	3300006162	Watersheds	VAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK*
Ga0070712_1010029981	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK*
Ga0075421_1004076311	3300006845	Populus Rhizosphere	DAIKAAFGDAWQQSYLPEGYSALMTAYSVQHFLVSESSIAK*
Ga0075425_1024407421	3300006854	Populus Rhizosphere	LAPEVVFESIWRDLDAVKVAFGDAWQQSHLPQGYSALMTAYSVHHF
Ga0075434_1016961651	3300006871	Populus Rhizosphere	EVVFESIWQDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK*
Ga0079219_100182054	3300006954	Agricultural Soil	EVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAHSVHHFLVSESSTTK*
Ga0105248_134380561	3300009177	Switchgrass Rhizosphere	MQPLIFESIWQDLDAVKVAFGDAWEQSYLPDGYAALMTAYSVQHFVVSENSTNK*
Ga0105076_10053282	3300009816	Groundwater Sand	IWRDLDAIKAAFGDAWQQSYLPEGYSALMTAYSVHHFLVSESSIAK*
Ga0123355_115518651	3300009826	Termite Gut	DSSAPEVVFESIWRDLDVVKVAFGDAWPQSPLPEGYSALMTAYSVHLFLVNESATTE*
Ga0126380_106128881	3300010043	Tropical Forest Soil	SAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSPLMTAYLVHHFLVSEISTTN*
Ga0126382_104522643	3300010047	Tropical Forest Soil	VDASAFEVVFESIWRDLHAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFFVSESS
Ga0126373_106106861	3300010048	Tropical Forest Soil	EVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK*
Ga0126373_107627933	3300010048	Tropical Forest Soil	ASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESLTTEQFASDFRT*
Ga0126373_109131052	3300010048	Tropical Forest Soil	LDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK*
Ga0126373_113992632	3300010048	Tropical Forest Soil	SAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT*
Ga0126370_106580982	3300010358	Tropical Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETSTTN*
Ga0126370_116444643	3300010358	Tropical Forest Soil	DAIKAAFGDAWQQSYLPEGYSALMTAYSVHHFLVSESSIAK*
Ga0126376_101543633	3300010359	Tropical Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFFVSESSTRSIPAQADLE*
Ga0126372_120719662	3300010360	Tropical Forest Soil	VEEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSTTK*
Ga0126379_109203771	3300010366	Tropical Forest Soil	SIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK*
Ga0126379_109816601	3300010366	Tropical Forest Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTAK*
Ga0126379_110494902	3300010366	Tropical Forest Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTQ*
Ga0126381_1018393742	3300010376	Tropical Forest Soil	PEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTACSVHHFLVSESSTTEQFASEPRT*
Ga0126381_1046494822	3300010376	Tropical Forest Soil	FESIWRDLDAVKVAFGDAWQQSYLPERYSALMTAYSVHHFLVSESSTSEQFVSAPRT*
Ga0126383_120397881	3300010398	Tropical Forest Soil	LAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFFV
Ga0124844_10455631	3300010868	Tropical Forest Soil	RLATWRDLDAVEEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSTTK*
Ga0126369_102650712	3300012971	Tropical Forest Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYAALMTAYSVHHFLVSESSTTEQSASEART*
Ga0126369_105439263	3300012971	Tropical Forest Soil	ESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASELRT*
Ga0126369_111980661	3300012971	Tropical Forest Soil	EVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTAKSFASELRT
Ga0126369_112574892	3300012971	Tropical Forest Soil	WPDLDAVKEAFGDRWQQSYLPEGYSVLMTAYWVHHFLVSENSTTK*
Ga0126369_112717482	3300012971	Tropical Forest Soil	DLDAVKEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSVTK*
Ga0132256_1013435941	3300015372	Arabidopsis Rhizosphere	DLDAIKAAFGDAWQQSYLPEGYSALMTAYSVHHFLVSESSIAK*
Ga0182036_102342121	3300016270	Soil	VWRDLDAVKEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSEN
Ga0182041_101249411	3300016294	Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0182041_102699092	3300016294	Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK
Ga0182033_105224642	3300016319	Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK
Ga0182035_106222851	3300016341	Soil	LDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0182035_110090351	3300016341	Soil	ESIWRDLDAVKVAFGDAWQQSHLPEGYFALMTAYSVHHFLVSESSTTEQFASEPRT
Ga0182035_115151201	3300016341	Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAHSVHHFLVSESSTRSGTKTLSAK
Ga0182035_117082632	3300016341	Soil	VESIWRDLDAVKVAFGDAWQQSHLPEGYSPLMTAYSVHHFLVSESSTTK
Ga0182032_100687291	3300016357	Soil	DAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0182032_109256492	3300016357	Soil	EPVDASAPEVESIWRDLDAVKVAFGDAWQQSHLPEGYSPLMTAYSVHHFLVSESSTTK
Ga0182032_113786872	3300016357	Soil	WRDLDAVKVAFGDAWQQSHLPEGYSELMTAYSVHHFFVTESSTTK
Ga0182034_108579001	3300016371	Soil	SIWRDLDAVKVAFGDAWQQSHLPEGYSALMPAYSVHHFLVSESSTTK
Ga0182034_110843072	3300016371	Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0182034_114665141	3300016371	Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0182034_118069071	3300016371	Soil	KMAFGDAWQQSHLPEGYFALMTAYSVHHFLVSESSTTK
Ga0182040_102567501	3300016387	Soil	LAPEVVFESIWRDLDAVKVAFGDAWQQSQLPEGYSALMTAYSVHHFFVSESSTTK
Ga0182037_102229591	3300016404	Soil	DASAPGVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMPAYSVHHFLVSESSTTK
Ga0182037_111904381	3300016404	Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0182039_103282702	3300016422	Soil	SAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0182039_107884911	3300016422	Soil	KVAFGDAWQQSHLPEGYPALMTAYSVHHFLVSESSTTK
Ga0182038_101309633	3300016445	Soil	DLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK
Ga0182038_102422011	3300016445	Soil	DLDAVKMAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0182038_106889412	3300016445	Soil	LEVVFESIWRDLDAVKVAFGDAWQKSYIPEGYSPLMTAYSVHHFFVSEATTEQFASEPRTSAEDS
Ga0182038_107124982	3300016445	Soil	RILEPVDASAPEVIFESIWRDLDAVKVAFGDAWQLTAYSVHHFLVSESSTTN
Ga0182038_115540671	3300016445	Soil	AVKVAFGDAWQQSHLPEGYSELMTAYSVHHFFVTESSTTK
Ga0187819_104647871	3300017943	Freshwater Sediment	AFGDGWQQSQLPEGYSALMTAYSVDHFHVSESLTTT
Ga0187785_104756311	3300017947	Tropical Peatland	VFESSWRDLDAVKVAFGDAWYQSYLPECYSALMTAYSVHHFLVSESSTTEQFASEPRT
Ga0187817_104641182	3300017955	Freshwater Sediment	AFGDGWQQSHLPEGYSALMTAYSVHHFLVSESSTTN
Ga0187778_103959222	3300017961	Tropical Peatland	DLDAVKVAFGDAWEQSYLPDGYSALMTAHSVHHFVVSENSTSP
Ga0187776_108615751	3300017966	Tropical Peatland	AVKLAFGDAWQQSHLPEGYAALMTAYSVHHFLVSESSTTK
Ga0187787_103609661	3300018029	Tropical Peatland	EVVFESIWRDLDAVKVAFGDAWQQSHLPGGYSALMTAYSVHHFFVSESSTRSTHAPADLK
Ga0187774_101510543	3300018089	Tropical Peatland	LDAVKVAFGDAWQQSYLPEGYSALMTAYSVHHFLVSESSTTK
Ga0210399_108221712	3300020581	Soil	PEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0210400_105015421	3300021170	Soil	RDLDAIKAAFGDAWQQSYLPEGYSALMTAYSVHHFLVSESSIAK
Ga0213872_101970681	3300021361	Rhizosphere	VHASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESLTTK
Ga0213878_101460681	3300021444	Bulk Soil	VFESIWRDLDAVKVVFGDAWQQSHLPEGYSALMTAYSVHHFFVSESSTRSNPAPADLE
Ga0126371_109785191	3300021560	Tropical Forest Soil	SAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYAALMTAYSVHHFLVSESSTTEQSASEART
Ga0126371_126777282	3300021560	Tropical Forest Soil	EVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0126371_137486862	3300021560	Tropical Forest Soil	DLDAVKVAFGDAWQQSHLPEDYSALMTAYSVHHFLVSESSTTK
Ga0207693_108067822	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0207709_102895232	3300025935	Miscanthus Rhizosphere	DLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0207823_1149021	3300026860	Tropical Forest Soil	LDAVKVAFGDTWQQSHLPEGYSALMTAYSVHHFFVSESSTTK
Ga0207840_10026943	3300026910	Tropical Forest Soil	FGNAWQQSHLPEGYSALMTAYSVHHFLVSESAVKNPL
Ga0207852_10043624	3300026959	Tropical Forest Soil	KVAFGDTWQQSHLPEGYSALMTAYSVHHFFVSESSTTK
Ga0207722_10006731	3300027003	Tropical Forest Soil	AFGDTWQQSHLPEGYSALMTAYSVHHFFVSESSTTK
Ga0207826_10217663	3300027680	Tropical Forest Soil	VDASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAHSVHHFLV
Ga0209465_100219231	3300027874	Tropical Forest Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT
Ga0209465_100974001	3300027874	Tropical Forest Soil	FESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTN
Ga0265770_10338932	3300030878	Soil	FESIWQDLDAVKVAFGEAWQQSHLPEGYPALMTDYSVHHFLISESSTTK
Ga0170824_1162013394	3300031231	Forest Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0170820_149332711	3300031446	Forest Soil	GRDLDAVKVAFGDAWQQSFLPEGYSALMTAYSVHHFLVSENSTTK
Ga0318541_107866332	3300031545	Soil	RDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFFVSESSTRSGTKTLSAK
Ga0310915_102537042	3300031573	Soil	LDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFFVSESSTRSGTKTLSAK
Ga0318561_104836982	3300031679	Soil	VVFVSIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0318560_104895641	3300031682	Soil	VVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT
Ga0318496_103528292	3300031713	Soil	VKEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSENSTIK
Ga0306917_104047772	3300031719	Soil	APEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0306918_100511393	3300031744	Soil	APGVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMPAYSVHHFLVSESSTTK
Ga0318509_103331013	3300031768	Soil	AVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFPSEPRT
Ga0318546_110095261	3300031771	Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0318565_100997033	3300031799	Soil	AVKEAFADGWQQSHLPEGYSALMTTYSVDHFLVSESSTTK
Ga0318567_100264494	3300031821	Soil	VAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0310917_107180591	3300031833	Soil	ADASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0306919_108851331	3300031879	Soil	DAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0306919_111438491	3300031879	Soil	ESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0318544_102845351	3300031880	Soil	VKEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSEN
Ga0306925_101325257	3300031890	Soil	VVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0306925_109042921	3300031890	Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0306925_114332001	3300031890	Soil	VFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0306921_100407121	3300031912	Soil	DAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSDSSTTK
Ga0306921_105205911	3300031912	Soil	ASAPEVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMISYSVHHFLVSESSTTEEFASEPRT
Ga0306921_126022591	3300031912	Soil	KVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSETTK
Ga0306921_126179031	3300031912	Soil	AVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTEQFASEPRT
Ga0310912_104946662	3300031941	Soil	WRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK
Ga0310916_104560461	3300031942	Soil	VVFESIWRDLDAVKVAFGDAWQKSYIPEGYSPLMTAYSVHHFFVSEATTEQFASEPRTSAEDS
Ga0310913_104334721	3300031945	Soil	GLAPEVAFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0310913_110714771	3300031945	Soil	WRDLDAVKEAFGDGWQQSYLPEGYSVLMTAYSVHHFLVSEN
Ga0306926_124582071	3300031954	Soil	DASAPEVVFESIWRDLDAVRVAFGDAWQQSHLPEGYSALMTACSVHHFLVSESSTTEQFASEPRT
Ga0310911_101191931	3300032035	Soil	RDLDAVKVAFGDAWQQSHLPEGYSALMISYSVHHFLVSESSTTEEFASEPRT
Ga0310911_101487643	3300032035	Soil	PGVVFESIWRDLDAVKVAFGDAWQQSHLPEGYSALMPAYSVHHFLVSESSTTK
Ga0318545_101745882	3300032042	Soil	PEVIFESIWRDLDAVKVAFGDAWQLTAYSVHHFLVSESSTTN
Ga0318532_103516712	3300032051	Soil	VDTSAPEVVFESIWRDLDAVKVAFGDAWQQSQLPEGYSALMTAYSVHHFLVSESSKTEQFASEPRT
Ga0318540_104778561	3300032094	Soil	VVFESIWRDVDSVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSECSTTK
Ga0307471_1018007962	3300032180	Hardwood Forest Soil	AVKVAFGDAWQQSHLPEGYSALMTAYAVHHFLVSESSTTR
Ga0306920_1001146431	3300032261	Soil	IWRDLDAVEVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0306920_1004692251	3300032261	Soil	IWRDLDAVKVAFGDAWQQSHLPEGYSALMISYSVHHFLVSESSTTEEFASEPRT
Ga0306920_1029354421	3300032261	Soil	VKVAFGDAWQQSHLPEGYSALMTAYSVHHFFVSESSTTK
Ga0306920_1035446622	3300032261	Soil	SAPDVVFESIWQDLDAVKVAFGDAWEQSYLPEGYAALMTAYSVHHFLVSESSTAK
Ga0306920_1043363251	3300032261	Soil	EVVFKSIWRDLDAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSESSTTK
Ga0310914_107320281	3300033289	Soil	DLDAVKVAFGDTWQQSYLPEGYSALMTAYSVHHFFVSESSTTK
Ga0310914_108537201	3300033289	Soil	DAVKVAFGDAWQQSHLPEGYSALMTAYSVHHFLVSENSTTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences