Metagenome / Metatranscriptome Family F046299

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046299
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	40 residues
Representative Sequence	NQLGVALPATAAARETYNYVKGSAKEDLDYSAVMKFWKK
Number of Associated Samples	127
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.66 %
% of genes near scaffold ends (potentially truncated)	99.34 %
% of genes from short scaffolds (< 2000 bps)	90.73 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.689 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.828 % of family members)
Environment Ontology (ENVO)	Unclassified (31.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.033 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.28% β-sheet: 0.00% Coil/Unstructured: 56.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF01209	Ubie_methyltran	8.61
PF00924	MS_channel	6.62
PF03544	TonB_C	5.96
PF05592	Bac_rhamnosid	5.96
PF01113	DapB_N	4.64
PF01329	Pterin_4a	3.31
PF00561	Abhydrolase_1	3.31
PF05899	Cupin_3	2.65
PF04389	Peptidase_M28	1.99
PF03446	NAD_binding_2	1.99
PF01135	PCMT	1.32
PF07883	Cupin_2	1.32
PF14833	NAD_binding_11	1.32
PF06182	ABC2_membrane_6	0.66
PF04014	MazE_antitoxin	0.66
PF12697	Abhydrolase_6	0.66
PF05231	MASE1	0.66
PF02687	FtsX	0.66
PF13520	AA_permease_2	0.66
PF00158	Sigma54_activat	0.66
PF00672	HAMP	0.66
PF07505	DUF5131	0.66
PF01850	PIN	0.66
PF01084	Ribosomal_S18	0.66
PF08308	PEGA	0.66
PF08388	GIIM	0.66
PF04191	PEMT	0.66
PF07238	PilZ	0.66
PF08818	DUF1801	0.66
PF13701	DDE_Tnp_1_4	0.66
PF02077	SURF4	0.66
PF00072	Response_reg	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	9.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	8.61
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	6.62
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	6.62
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	5.96
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	5.96
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	3.31
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.32
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.32
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.32
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.66
COG0238	Ribosomal protein S18	Translation, ribosomal structure and biogenesis [J]	0.66
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.66
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.66
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.66
COG3694	ABC-type uncharacterized transport system, permease component	General function prediction only [R]	0.66
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.66
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.66
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.90 %
Unclassified	root	N/A	3.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.26 %
Unclassified	root	N/A	3.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.79 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	9.27 %
Unclassified	root	N/A	3.31 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.79 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	9.27 %
Unclassified	root	N/A	3.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.99 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.99 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.27 %
Unclassified	root	N/A	3.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.99 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.66 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.27 %
Unclassified	root	N/A	3.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.99 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	9.27 %
Unclassified	root	N/A	3.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.99 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.66 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.66 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000731\|JGI12381J11899_1010431	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300001593\|JGI12635J15846_10175822	All Organisms → cellular organisms → Bacteria → Acidobacteria	1441	Open in IMG/M
3300001661\|JGI12053J15887_10574943	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300002560\|JGI25383J37093_10104396	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300004633\|Ga0066395_10006810	All Organisms → cellular organisms → Bacteria	4060	Open in IMG/M
3300005444\|Ga0070694_101234144	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005468\|Ga0070707_100465377	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300005541\|Ga0070733_10885711	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005559\|Ga0066700_10192661	All Organisms → cellular organisms → Bacteria → Acidobacteria	1404	Open in IMG/M
3300005569\|Ga0066705_10758105	Not Available	581	Open in IMG/M
3300005607\|Ga0070740_10027999	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
3300005995\|Ga0066790_10083236	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300006032\|Ga0066696_10686414	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006755\|Ga0079222_11556954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300006806\|Ga0079220_10687172	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300007265\|Ga0099794_10649968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009038\|Ga0099829_11679024	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300009088\|Ga0099830_10272692	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300009088\|Ga0099830_10409934	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300009088\|Ga0099830_11438937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300009089\|Ga0099828_10060367	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300009089\|Ga0099828_11326764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009090\|Ga0099827_10692716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300009137\|Ga0066709_101550599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	952	Open in IMG/M
3300009143\|Ga0099792_10473576	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300009148\|Ga0105243_10870034	Not Available	894	Open in IMG/M
3300009176\|Ga0105242_10920988	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009792\|Ga0126374_10113268	All Organisms → cellular organisms → Bacteria → Acidobacteria	1568	Open in IMG/M
3300010046\|Ga0126384_11045264	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010303\|Ga0134082_10421203	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300010322\|Ga0134084_10395820	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300010358\|Ga0126370_10059673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2470	Open in IMG/M
3300010359\|Ga0126376_10912636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	870	Open in IMG/M
3300010360\|Ga0126372_10347340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300010360\|Ga0126372_11516335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300010360\|Ga0126372_12927662	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300010366\|Ga0126379_12003141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300011269\|Ga0137392_10816588	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300011269\|Ga0137392_11306159	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300011269\|Ga0137392_11447679	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300011270\|Ga0137391_10697735	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300011271\|Ga0137393_10971304	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300012096\|Ga0137389_10985686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300012096\|Ga0137389_11252302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300012202\|Ga0137363_10536069	Not Available	985	Open in IMG/M
3300012202\|Ga0137363_11698587	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300012205\|Ga0137362_11442930	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300012211\|Ga0137377_10610378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300012212\|Ga0150985_121290503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300012285\|Ga0137370_10092173	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300012349\|Ga0137387_10151143	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300012349\|Ga0137387_10707002	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300012350\|Ga0137372_10540044	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300012356\|Ga0137371_10342377	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300012356\|Ga0137371_10463340	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012361\|Ga0137360_11895635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012363\|Ga0137390_10370273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1413	Open in IMG/M
3300012363\|Ga0137390_10595839	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300012363\|Ga0137390_10601678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300012923\|Ga0137359_10261994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1541	Open in IMG/M
3300012925\|Ga0137419_11314979	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300012927\|Ga0137416_10472821	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300012948\|Ga0126375_10202951	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300012971\|Ga0126369_11352304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300015053\|Ga0137405_1028983	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300015242\|Ga0137412_10836895	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300015264\|Ga0137403_10249235	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300016270\|Ga0182036_11304209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300016319\|Ga0182033_11966087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300016445\|Ga0182038_11304195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300017926\|Ga0187807_1118557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	838	Open in IMG/M
3300017929\|Ga0187849_1209674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300017929\|Ga0187849_1213652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300017931\|Ga0187877_1213550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300017934\|Ga0187803_10485432	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300017940\|Ga0187853_10455852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300017943\|Ga0187819_10451762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300017955\|Ga0187817_10399916	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300018062\|Ga0187784_11519080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300018086\|Ga0187769_11117133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300018090\|Ga0187770_10306648	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300019264\|Ga0187796_1412516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300020170\|Ga0179594_10107455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300020579\|Ga0210407_11222528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300020581\|Ga0210399_11525552	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300020582\|Ga0210395_10281550	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300021046\|Ga0215015_10035316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300021046\|Ga0215015_10113857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300021168\|Ga0210406_10060936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3273	Open in IMG/M
3300021168\|Ga0210406_10134119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2085	Open in IMG/M
3300021171\|Ga0210405_10007226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9784	Open in IMG/M
3300021178\|Ga0210408_10839647	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300021178\|Ga0210408_11148404	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300021180\|Ga0210396_11765917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021405\|Ga0210387_10288377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1442	Open in IMG/M
3300021406\|Ga0210386_10317831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1336	Open in IMG/M
3300021420\|Ga0210394_11501197	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300021420\|Ga0210394_11596361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021559\|Ga0210409_10321299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1393	Open in IMG/M
3300022533\|Ga0242662_10287541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300025941\|Ga0207711_10363518	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300026313\|Ga0209761_1307595	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300026320\|Ga0209131_1252863	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300026524\|Ga0209690_1204718	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300026527\|Ga0209059_1287273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300026530\|Ga0209807_1243695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300026551\|Ga0209648_10150750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1836	Open in IMG/M
3300026557\|Ga0179587_11000726	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300026845\|Ga0207760_111198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300027014\|Ga0207815_1040846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300027565\|Ga0209219_1108829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027576\|Ga0209003_1037096	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300027654\|Ga0209799_1150518	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027725\|Ga0209178_1043575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1430	Open in IMG/M
3300027842\|Ga0209580_10104087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1375	Open in IMG/M
3300027842\|Ga0209580_10206798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	974	Open in IMG/M
3300027867\|Ga0209167_10588094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300028536\|Ga0137415_11025469	Not Available	637	Open in IMG/M
3300030739\|Ga0302311_10190806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1561	Open in IMG/M
3300030842\|Ga0075404_11599868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1421	Open in IMG/M
3300031573\|Ga0310915_10039304	All Organisms → cellular organisms → Bacteria	3005	Open in IMG/M
3300031668\|Ga0318542_10113541	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300031682\|Ga0318560_10220639	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031715\|Ga0307476_10973225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031718\|Ga0307474_11500744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031719\|Ga0306917_10519248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	936	Open in IMG/M
3300031720\|Ga0307469_11946220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031744\|Ga0306918_10292321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1253	Open in IMG/M
3300031753\|Ga0307477_10019451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4643	Open in IMG/M
3300031753\|Ga0307477_10337659	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300031765\|Ga0318554_10638500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300031770\|Ga0318521_10321987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	913	Open in IMG/M
3300031833\|Ga0310917_10094965	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300031946\|Ga0310910_10164464	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300031947\|Ga0310909_10122360	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300031954\|Ga0306926_10047375	All Organisms → cellular organisms → Bacteria	5129	Open in IMG/M
3300031962\|Ga0307479_10057185	All Organisms → cellular organisms → Bacteria	3756	Open in IMG/M
3300031962\|Ga0307479_10193137	All Organisms → cellular organisms → Bacteria → Acidobacteria	2004	Open in IMG/M
3300031962\|Ga0307479_10369551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1418	Open in IMG/M
3300032059\|Ga0318533_11037711	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300032066\|Ga0318514_10805610	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300032067\|Ga0318524_10119233	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300032089\|Ga0318525_10473019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300032180\|Ga0307471_100579335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1279	Open in IMG/M
3300032180\|Ga0307471_103107069	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032180\|Ga0307471_103716483	Not Available	540	Open in IMG/M
3300032782\|Ga0335082_11028789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300032895\|Ga0335074_10266826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1995	Open in IMG/M
3300032955\|Ga0335076_10721397	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300033158\|Ga0335077_11122551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300033289\|Ga0310914_10882720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.05%
Aquatic	Environmental → Aquatic	5.30%
Plants	Host-Associated → Plants	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.39%
Freshwater	Environmental → Aquatic → Freshwater	5.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.99%
Peat	Environmental → Terrestrial → Peat	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.15%
Loam	Environmental → Terrestrial → Soil → Loam	7.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000731	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12381J11899_10104312	3300000731	Tropical Forest Soil	LALDLANQLGVALPATAAAREVYNYVKGETKEDLDYSAVMRFWEK*
JGI12635J15846_101758221	3300001593	Forest Soil	QIGVALPATAAAREIYSYVKGNAKEDLDYSAVMKFWQR*
JGI12053J15887_105749431	3300001661	Forest Soil	VALPATAAAREIYSYVKGNAKEDLDFSAVMKFWRR*
JGI25383J37093_101043962	3300002560	Grasslands Soil	NQLGVALPATAAARETYNFVKGAAKEDLDYSAVMKFWKR*
Ga0066395_100068106	3300004633	Tropical Forest Soil	ANQLGVSLPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK*
Ga0070694_1012341441	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LDLGNQIGVPLPAAAAAREVYNSVKGSCKEDLDYAAVMKFWKR*
Ga0070707_1004653772	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LSLALDLGNQIGVPLPATAAAREIYSSVEGSSKEDLDYAAVFKFWKK*
Ga0070733_108857112	3300005541	Surface Soil	LSLALDLGNQLGVPLPAAAAAREIYNSVKGSSKDDLDYAAVYKFWNR*
Ga0066700_101926611	3300005559	Soil	ALPATAAARETYNYVKGAAKEDLDYSAVMRFWKS*
Ga0066705_107581052	3300005569	Soil	ALPATAAAREAYNYVKGAAKEDLDYSAVMKFWKR*
Ga0070740_100279991	3300005607	Surface Soil	GVPLPAVAAARETYNAVKGAAKEDLDYSAVMKFWTK*
Ga0066790_100832361	3300005995	Soil	LGVTLPAAKAARETYGSVKAAAKEDLDYSAVMKFWRP*
Ga0066696_106864141	3300006032	Soil	LDLANQLGVALPATAAARETYNYDKGAAKEDLDYSAVMRFWKS*
Ga0079222_115569541	3300006755	Agricultural Soil	QLGVALPATAAAREIYNAVKGAAKEDLDYSAVMKFWKR*
Ga0079220_106871721	3300006806	Agricultural Soil	NQLGVALPATAAAREIYNAVKGAAKEDLDYSAVMRFWKH*
Ga0099794_106499682	3300007265	Vadose Zone Soil	QLGVALPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK*
Ga0099829_116790241	3300009038	Vadose Zone Soil	ALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0099830_102726923	3300009088	Vadose Zone Soil	LDLANQLGVALPATAAAREIYNAVKGAAREDLDYSAVMKFWNS*
Ga0099830_104099341	3300009088	Vadose Zone Soil	LGLALDVGNQLGVALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0099830_114389372	3300009088	Vadose Zone Soil	ALPATAAAREIYNAVKGAATEDVDYAAVGRFWGSDRR*
Ga0099828_100603674	3300009089	Vadose Zone Soil	GVALPATAAAREVYSYVKSSAKEDLDYSAVMKFWRR*
Ga0099828_113267641	3300009089	Vadose Zone Soil	LALDLANQLGVALPATAAAREIYNAVKGAAKNEDPDYAVVARFWQNR*
Ga0099827_106927163	3300009090	Vadose Zone Soil	ALPATAAAREIYNAVKGDAKEDIDYSAVMKFWKP*
Ga0066709_1015505992	3300009137	Grasslands Soil	ALPATAAAREIYNAVKGAAKEDLDYSAVMKFWKR*
Ga0099792_104735761	3300009143	Vadose Zone Soil	LGNQIGVALPATAAAREIYSYVKGGAKEDLDYSAVMKFWRR*
Ga0105243_108700341	3300009148	Miscanthus Rhizosphere	GVPLPAAAAAREVYNSVKGSCKEDLDYAAVMKFWKR*
Ga0105242_109209881	3300009176	Miscanthus Rhizosphere	MTSAPAAAAARETYSYVKGASKEDLDYSAVMKFWQR*
Ga0126374_101132684	3300009792	Tropical Forest Soil	LANQLGVPLPTTAAARETYSAVKGTNPEDLDYSAVMKFWKR*
Ga0126384_110452642	3300010046	Tropical Forest Soil	VPLPAAAAAREVYNAVRGSAREDLDYAAVFKFWKG*
Ga0134082_104212032	3300010303	Grasslands Soil	ALPATAAARETYNYVKGAAKEDLDYSAVMRFWKN*
Ga0134084_103958201	3300010322	Grasslands Soil	NQLGVALPATAAARETYNYVKGASKEDLDYSAVMKFWKR*
Ga0126370_100596733	3300010358	Tropical Forest Soil	LGVALPATAAAREIYSSVKGAAKEDLDYSAVMRFWKH*
Ga0126376_109126362	3300010359	Tropical Forest Soil	ANQLGVPLPATAAAREIYNGVRGAAKEDLDYAAVARFWQKS*
Ga0126372_103473401	3300010360	Tropical Forest Soil	VALPATAAAREIYSAVKGAAKEDLDYSAVMKFWQR*
Ga0126372_115163351	3300010360	Tropical Forest Soil	ANQIGVALPATAAARETYSYVKGSTSEDLDYAGVMRFWKK*
Ga0126372_129276621	3300010360	Tropical Forest Soil	SLALELGNQIGVPLPAAAAAREVYNSVKGSWREDLDYAAVMKYWRR*
Ga0126379_120031411	3300010366	Tropical Forest Soil	QIGVALPATAAARETYNYVKGSTSEDLDYAGVMRFWKK*
Ga0137392_108165883	3300011269	Vadose Zone Soil	VALPATAAARETYSYVKGAAREDLDYSAVMKFWKR*
Ga0137392_113061592	3300011269	Vadose Zone Soil	LGNQLGVALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0137392_114476791	3300011269	Vadose Zone Soil	VALPATAAARETYSYVKGAAREDLDYSAVMKFWKH*
Ga0137391_106977352	3300011270	Vadose Zone Soil	QLGVALPATAAARETYNFVKGAAKEDLDYSAVMKFWKR*
Ga0137393_109713041	3300011271	Vadose Zone Soil	LANQIGVALPATAAAREIYSYVKGEAKEDLDYSAVMKFWRR*
Ga0137389_109856862	3300012096	Vadose Zone Soil	GLALDLANQLGVALPATAAAREIYNAVKGAAKNEDPDYAAVARFWQNR*
Ga0137389_112523021	3300012096	Vadose Zone Soil	LANQLGVALPATAAAREIYNAVKGAAKNEDPDYAVVARFWQNR*
Ga0137363_105360691	3300012202	Vadose Zone Soil	PLPAAAASREIYNSVKGASKEDLDYAAVYKYWEK*
Ga0137363_116985872	3300012202	Vadose Zone Soil	GVALPATAAARETYNYVKGSTSEDLDYAGIMRFWKK*
Ga0137362_114429302	3300012205	Vadose Zone Soil	GVALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0137377_106103782	3300012211	Vadose Zone Soil	IPLPAAAAAREIYNSVKGSSKDDLDYAAVYKFWNR*
Ga0150985_1212905031	3300012212	Avena Fatua Rhizosphere	IGVALPATAAARETYNFVKGASKEDLDYSAVMKFWQR*
Ga0137370_100921733	3300012285	Vadose Zone Soil	VALPATAAARETYNYVKGASKEDLDYSAVMKFWKR*
Ga0137387_101511431	3300012349	Vadose Zone Soil	QLGVALPATAAAREVYNAVKGAAKEDLDYSAVMKFWKR*
Ga0137387_107070022	3300012349	Vadose Zone Soil	NQLGVALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0137372_105400442	3300012350	Vadose Zone Soil	GNQLGVALPATAAARENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0137371_103423771	3300012356	Vadose Zone Soil	LDLGNQLGVALPATAAVRENYNYVKGAAKEDLDYSAVMKFWKK*
Ga0137371_104633402	3300012356	Vadose Zone Soil	SLALDLGNQIGVPLPATAAAREIYSSVEGSSKEDLDYAAVFKFWKK*
Ga0137360_118956352	3300012361	Vadose Zone Soil	PLPAAAAAREIYNSVKGSSKDDLDYAAVYKFWDR*
Ga0137390_103702731	3300012363	Vadose Zone Soil	LANQLGVALPATAAARETYNYVKGTAKEDLDYSAVMKFWKQ*
Ga0137390_105958392	3300012363	Vadose Zone Soil	QIGVALPATAAAREIYSYVKGEAKEDLDYSAVMKFWRR*
Ga0137390_106016781	3300012363	Vadose Zone Soil	LGVALPATAAARETYNYVKGAAREDLDYSAVMKFWNR*
Ga0137359_102619941	3300012923	Vadose Zone Soil	QIGVALPATAAAREIYSYVKGNAKEDLDFSAVMKFWRR*
Ga0137419_113149791	3300012925	Vadose Zone Soil	VALPATAAARETYNYVKGAAKEDLDYSAVMKFWTR*
Ga0137416_104728211	3300012927	Vadose Zone Soil	LDLGNQIGVALPATAAAREIYSYVKGNAKEDLDFSAVMKFWRR*
Ga0126375_102029511	3300012948	Tropical Forest Soil	ANQLGVALPATAAARETYNYVKGAAKEDLDYSAVMKFWKL*
Ga0126369_113523041	3300012971	Tropical Forest Soil	ALDLGNQIGVPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWTR*
Ga0137405_10289831	3300015053	Vadose Zone Soil	PFPPLPPPAETYNYVKGAAKEDLDYSAVMKFWKP*
Ga0137412_108368951	3300015242	Vadose Zone Soil	LDLASQLGVTLPAASAARETYGTVKAAAKQDLDYSAVMKFWRP*
Ga0137403_102492351	3300015264	Vadose Zone Soil	DLGNQLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK*
Ga0182036_113042091	3300016270	Soil	RLALDLANQLGVALPTTAAVREVYNHVKGEATQDVDYSAVIRFYRN
Ga0182033_119660871	3300016319	Soil	LANQLGVALPATAAAREVYNYVKGEAKEDLDYSAVMRFWEK
Ga0182038_113041951	3300016445	Soil	VSLPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK
Ga0187807_11185571	3300017926	Freshwater Sediment	GLALELGNQLGVALPTTAAAREVYNYVKGESKEDLDYSAVMKFWKK
Ga0187849_12096741	3300017929	Peatland	NQLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0187849_12136522	3300017929	Peatland	GVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0187877_12135501	3300017931	Peatland	QLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0187803_104854322	3300017934	Freshwater Sediment	GVPLPATAAAREVYNAVKGEAKEDLDYSAVMRFWKK
Ga0187853_104558523	3300017940	Peatland	DLANQLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0187819_104517622	3300017943	Freshwater Sediment	NQLGVALPATAAARETYNYVKGAAKEDLDYSAVMKFWNK
Ga0187817_103999162	3300017955	Freshwater Sediment	GVPLPAAAAAREVYNKVLGAAKEDLDFAAIARFWEK
Ga0187784_115190802	3300018062	Tropical Peatland	ALDLANQLGVALPTTAAAREVYNHVKGETKEDVDYSAVMRFYKK
Ga0187769_111171331	3300018086	Tropical Peatland	QLGVALPATAAARETYNYVKGAAKEDLDYSAVMKFWKQ
Ga0187770_103066482	3300018090	Tropical Peatland	GNQTGVPLPAAAAAREVYNYVLGAAKEDLDYAAIARFWEK
Ga0187796_14125162	3300019264	Peatland	LDLANQLGVPLPATAAAREVYNYVRGEAKEDLDYSAVMRFWKK
Ga0179594_101074552	3300020170	Vadose Zone Soil	GVALPATAAAREIYSYVKGNAKEDLDFSAVMKFWRR
Ga0210407_112225281	3300020579	Soil	GNQLGVALPATAAAREVYSYVKGEAKEDLDYSGVMRFWKK
Ga0210399_115255521	3300020581	Soil	GNQIGVALPATAAAREIYSYVKGNAKEDLDYSAVMKFWRRQP
Ga0210395_102815501	3300020582	Soil	GVPLPACAAAREVYSAVKGAAKEDLDYAAVAKFWGKDRK
Ga0215015_100353161	3300021046	Soil	MCIRDSPATAAARERYNYVKCAAKEDLDYSAVMKFWKS
Ga0215015_101138571	3300021046	Soil	LGNQLRVALPATAAARETYNYVKGAAKEDLDYSAVMKFWKK
Ga0210406_100609364	3300021168	Soil	LGNQLGIPLPAAAAAREIYNYVKGSSQDDLDYAAVFKFWDK
Ga0210406_101341193	3300021168	Soil	LYLPVPSGRGLALDLGNQLGIPLPAAAAAREIYNYVKGSSQDDLDYAAVFKFWDK
Ga0210405_100072261	3300021171	Soil	ASKLGVTLPAATAARETYGKVKAAAKEDLDYSAVMKFWRP
Ga0210408_108396472	3300021178	Soil	ANQLGVALPATAAARETYSYVKGAAKEDLDYSAVMKFWKK
Ga0210408_111484041	3300021178	Soil	GLALDLANQLGVALPATAAAREIYSAVKGAAKQDLDYSAVMQFWKS
Ga0210396_117659171	3300021180	Soil	QLGVALPATAAAREVYNYVKGEAKEDLDYSAVMKFWKK
Ga0210387_102883773	3300021405	Soil	DLGNQLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0210386_103178312	3300021406	Soil	ANQLGVALPTTAAVREVYNFVKGEAKEDVDYSAVMRFYKK
Ga0210394_115011972	3300021420	Soil	LSLALDLGNQIGVALPATAAAREIYNYVKGNAKEDLDYSAVMKFWRR
Ga0210394_115963612	3300021420	Soil	LDLGNQLGVALPTTAAAREVYNQVKGDAKEDLDYSAVMKFWER
Ga0210409_103212992	3300021559	Soil	GVALPATAAAREVYNYVKGASPDDLDYSGIMRFWQKQ
Ga0242662_102875412	3300022533	Soil	GVALPATAAAREVYSYVKGDAKEDLDYSGVMRFWKK
Ga0207711_103635183	3300025941	Switchgrass Rhizosphere	LGNQIGVPLPAAAAAREIYNSVKGASKEDLDYAAVYKFWPR
Ga0209761_13075952	3300026313	Grasslands Soil	NQLGVPLPATAAAREIYNAVKGSAKEDLDYAAVARFWQRA
Ga0209131_12528632	3300026320	Grasslands Soil	DLANQIGVALPATAATRETYNYVKGSTTEDLDYAGVMRFWKK
Ga0209690_12047182	3300026524	Soil	NQLGVALPATAAAREVYNAVKGAAKEDLDYSAVMKFWKR
Ga0209059_12872731	3300026527	Soil	GVALPATAAAREIYNAVKGAAKEDLDYSAVMQFWKR
Ga0209807_12436951	3300026530	Soil	DLSLVLELANQIGVALPAAAAARETYNYVKGASKQDLDYSAVMKFWQP
Ga0209648_101507502	3300026551	Grasslands Soil	GVALPATAAVRETYNYVKGAAKEDLDYSAVMKFWQR
Ga0179587_110007261	3300026557	Vadose Zone Soil	ALDLGNQIGVALPATAAAREVYSYVKGNAEEDLDYSAVMKFWQRQP
Ga0207760_1111981	3300026845	Tropical Forest Soil	GVALPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK
Ga0207815_10408462	3300027014	Tropical Forest Soil	DLANQLGVALPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK
Ga0209219_11088291	3300027565	Forest Soil	NQIGVALPATAAARETYNYVKGATKEDLDYSAVMKFWKS
Ga0209003_10370961	3300027576	Forest Soil	LGVALPATAAAREIYSAVKGAAKEDLDYSAVMRFWKR
Ga0209799_11505182	3300027654	Tropical Forest Soil	GGPLPAAAAAREVYNSVKGSSQEDLDYAAVMKYWKR
Ga0209178_10435753	3300027725	Agricultural Soil	ANQVGVPLPATASSRETYSYVKGSTKEDLDYAAVMKFWNR
Ga0209580_101040872	3300027842	Surface Soil	VALPATAAARETYNYVKGAAKEDLDYSAVMKFWKS
Ga0209580_102067982	3300027842	Surface Soil	LELGNQLGVALPATAAAREVYNYVKGEAKEDLDYSAVMRFWKK
Ga0209167_105880942	3300027867	Surface Soil	LSLALDLGNQLGVPLPAAAAAREIYNSVKGSSKDDLDYAAVYKFWNR
Ga0137415_110254692	3300028536	Vadose Zone Soil	NQLGVALPATAAARETYNYVKGSTAEDLDYAGVMRFWKK
Ga0302311_101908061	3300030739	Palsa	GVTLPATAAARATYAHVKEAAKEDLDYSGVLKFWSKT
Ga0075404_115998681	3300030842	Soil	LDLANQLGVALPATAAAREVYNYVKGTSPDDLDYSGVMRFWQK
Ga0310915_100393043	3300031573	Soil	LGNQIGVPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWPR
Ga0318542_101135411	3300031668	Soil	DLGNQLGVPLPAAAAARETYNSVKGSSKDDLDYAAVYKFWPR
Ga0318560_102206393	3300031682	Soil	IGVPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWPR
Ga0307476_109732252	3300031715	Hardwood Forest Soil	NQLGVALPTTAAAREVYNYVKGEAKEDLDYSGVMRFWKK
Ga0307474_115007441	3300031718	Hardwood Forest Soil	NQLGVALPATAAARETYNYVKGSAKEDLDYSAVMKFWKK
Ga0306917_105192482	3300031719	Soil	LGNQLGVPLPAAAAARETYNSVKGSSRDDLDYAAVYKFWPR
Ga0307469_119462202	3300031720	Hardwood Forest Soil	LLDLANQLGVALPATAAAREVYSYVKGEAKEDLDYSGVMRYWKK
Ga0306918_102923212	3300031744	Soil	LALDLGNQLGVPLPAAAAARETYNSVKGSSRDDLDYAAVYKFWPR
Ga0307477_100194511	3300031753	Hardwood Forest Soil	VALPATAAAREVYNAVKGAAKEDLDYSAVMKFWKR
Ga0307477_103376592	3300031753	Hardwood Forest Soil	VVLPATAAAREVYSYVKGSAKEDLDYSAVMKFWRR
Ga0318554_106385002	3300031765	Soil	DLANQLGVALPATAAAREVYNFVKGEAKEDLDYSAVMRFWKK
Ga0318521_103219871	3300031770	Soil	LDLGNQLGVALPATAAAREVYNAVKGEAKEDLDYSAVMRFWKK
Ga0310917_100949651	3300031833	Soil	GNQIGVPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWPR
Ga0310910_101644641	3300031946	Soil	NQLGVALPATAAAREVYNFVKGEAKEDLDYSAVMRFWKK
Ga0310909_101223603	3300031947	Soil	VPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWPR
Ga0306926_100473757	3300031954	Soil	QLGVPLPAAAAARETYNSVKGSSRDDLDYAAVYKFWPR
Ga0307479_100571851	3300031962	Hardwood Forest Soil	GVTLPASSAARETYGKVKAAAKEDLDYSAVMKFWRH
Ga0307479_101931373	3300031962	Hardwood Forest Soil	VALPATAAARETYNYVKGAAKEDLDYSAVMKFWTR
Ga0307479_103695511	3300031962	Hardwood Forest Soil	GNQLGVALPATAAAREVYSYVKGEAKEDLDYSAVMRFWKK
Ga0318533_110377112	3300032059	Soil	LGVPLPSTAAARETYSAVRGRSQEDLDYSAVMKFWKR
Ga0318514_108056101	3300032066	Soil	VALPATAAARETYNFVKGSTSEDLDYAGVMRFWKR
Ga0318524_101192331	3300032067	Soil	NQIGVPLPAAAAAREVYNSVKGSSKDDLDYAAVYKFWPR
Ga0318525_104730192	3300032089	Soil	NQLGVSLPATAAAREVYNYVKGEAKEDLDYSAVMRFWKE
Ga0307471_1005793351	3300032180	Hardwood Forest Soil	LGIPLPATAASREIYNFVKGASKDDLDYAAVFKYWEK
Ga0307471_1031070692	3300032180	Hardwood Forest Soil	ALDLGNQIGVPLPAAAAAREVYNSVKGSCQEDLDYAAVMKFWKR
Ga0307471_1037164831	3300032180	Hardwood Forest Soil	NQLGVALPATAAARETYNYVKGAAKEDLDYSAVMKFWTR
Ga0335082_110287892	3300032782	Soil	QLGVALPATAAAREVYNYVKGESKEDVDYSAVRKFWKK
Ga0335074_102668264	3300032895	Soil	DLANQLGVALPTTAAVREVYSHVKGEATEDVDYSAVMRFYKK
Ga0335076_107213971	3300032955	Soil	LELGNQTGVPLPAAAAAREVYNSVLGAAKEDLDFASIAKFWK
Ga0335077_111225512	3300033158	Soil	MGLLLDLGNQLGVALPTTAAAREVYSYVKGEAKEDLDYSGVMKFWKK
Ga0310914_108827201	3300033289	Soil	LGLALDLANQLGVALPATAAAREVYNYVKGETKEDLDYSAVMRFWEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046299

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences