NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F046281

Metagenome / Metatranscriptome Family F046281

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F046281
Family Type Metagenome / Metatranscriptome
Number of Sequences 151
Average Sequence Length 91 residues
Representative Sequence MALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVNPNVVYTPYCTEDYSPTCTPPPANISQENFALPDNLYGVVPGFFYRVVVSGTVTAQ
Number of Associated Samples 119
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.97 %
% of genes near scaffold ends (potentially truncated) 93.38 %
% of genes from short scaffolds (< 2000 bps) 91.39 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.338 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(13.245 % of family members)
Environment Ontology (ENVO) Unclassified
(23.179 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.656 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.50%    β-sheet: 13.33%    Coil/Unstructured: 84.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF00361Proton_antipo_M 7.28
PF01436NHL 3.97
PF13414TPR_11 1.99
PF07311Dodecin 1.99
PF00515TPR_1 1.32
PF00069Pkinase 1.32
PF12704MacB_PCD 1.32
PF13649Methyltransf_25 0.66
PF13709DUF4159 0.66
PF01425Amidase 0.66
PF07676PD40 0.66
PF14559TPR_19 0.66
PF03795YCII 0.66
PF13432TPR_16 0.66
PF12951PATR 0.66
PF12893Lumazine_bd_2 0.66
PF01345DUF11 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 5.30
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 1.99
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.66
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.66


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.34 %
UnclassifiedrootN/A0.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY01BY0YYAll Organisms → cellular organisms → Bacteria537Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1024805All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium959Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1071419All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300002128|JGI24036J26619_10019457All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300004114|Ga0062593_100184482All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300004157|Ga0062590_100410867All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300004157|Ga0062590_100547435All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300004157|Ga0062590_102669754All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300004479|Ga0062595_101640004All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300004480|Ga0062592_102484642All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005175|Ga0066673_10293276All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium947Open in IMG/M
3300005175|Ga0066673_10811661All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005179|Ga0066684_10332178All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1014Open in IMG/M
3300005179|Ga0066684_10509425All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300005328|Ga0070676_11053321All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma panaciterrae613Open in IMG/M
3300005332|Ga0066388_107211858All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005338|Ga0068868_101930479All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005354|Ga0070675_100017068All Organisms → cellular organisms → Bacteria5770Open in IMG/M
3300005354|Ga0070675_101232385All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria689Open in IMG/M
3300005355|Ga0070671_102041103All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium510Open in IMG/M
3300005366|Ga0070659_101290175All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005444|Ga0070694_101078678All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005450|Ga0066682_10868126All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300005451|Ga0066681_10778347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300005454|Ga0066687_10134815All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1289Open in IMG/M
3300005456|Ga0070678_101837119All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005459|Ga0068867_100730550All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300005561|Ga0066699_11075740All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300005564|Ga0070664_100617206All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300005566|Ga0066693_10120781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium962Open in IMG/M
3300005569|Ga0066705_10206856All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1230Open in IMG/M
3300005569|Ga0066705_10402516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300005615|Ga0070702_101116356All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides → Myroides odoratus631Open in IMG/M
3300005617|Ga0068859_100572507All Organisms → cellular organisms → Bacteria → Acidobacteria1223Open in IMG/M
3300005617|Ga0068859_100985739All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300005617|Ga0068859_101199683All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005718|Ga0068866_11042912All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides → Myroides odoratus583Open in IMG/M
3300005719|Ga0068861_100318707All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300005764|Ga0066903_100335448All Organisms → cellular organisms → Bacteria2429Open in IMG/M
3300005764|Ga0066903_106546779All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005764|Ga0066903_108797967All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300005841|Ga0068863_102072470All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005844|Ga0068862_102672777All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006028|Ga0070717_10235969All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1611Open in IMG/M
3300006046|Ga0066652_100937630All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300006791|Ga0066653_10733564All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006800|Ga0066660_10827629All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium754Open in IMG/M
3300006845|Ga0075421_101059945All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300006853|Ga0075420_100212945All Organisms → cellular organisms → Bacteria1685Open in IMG/M
3300006854|Ga0075425_101340701All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium811Open in IMG/M
3300007076|Ga0075435_101236876All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium653Open in IMG/M
3300007076|Ga0075435_101950146All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium515Open in IMG/M
3300009012|Ga0066710_101982364All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium865Open in IMG/M
3300009100|Ga0075418_12070009All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300009101|Ga0105247_10151600All Organisms → cellular organisms → Bacteria1528Open in IMG/M
3300009147|Ga0114129_10142755All Organisms → cellular organisms → Bacteria3281Open in IMG/M
3300009156|Ga0111538_11199873All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium959Open in IMG/M
3300009792|Ga0126374_11873941All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300010047|Ga0126382_11584984All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010048|Ga0126373_12269449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium603Open in IMG/M
3300010320|Ga0134109_10467879All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010325|Ga0134064_10144946All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300010326|Ga0134065_10410875All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300010326|Ga0134065_10416893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300010337|Ga0134062_10192054All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium927Open in IMG/M
3300010361|Ga0126378_13392189All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300010366|Ga0126379_11080378All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300010366|Ga0126379_13398416All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300010371|Ga0134125_12599814All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010376|Ga0126381_101625058All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300010376|Ga0126381_103569729All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300010398|Ga0126383_10416354All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300010398|Ga0126383_13609295All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300010398|Ga0126383_13641951All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300010401|Ga0134121_12644704All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300012207|Ga0137381_11024694All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium711Open in IMG/M
3300012208|Ga0137376_10608006All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300012208|Ga0137376_10624809All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium931Open in IMG/M
3300012285|Ga0137370_10789624All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300012469|Ga0150984_101247887All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M
3300012515|Ga0157338_1095030All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012882|Ga0157304_1117261All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012960|Ga0164301_10446135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium919Open in IMG/M
3300012971|Ga0126369_11563451All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012977|Ga0134087_10302414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300012977|Ga0134087_10532484All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300012985|Ga0164308_11212669All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012986|Ga0164304_11803590All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012987|Ga0164307_10468913All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300012987|Ga0164307_10691899All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300012989|Ga0164305_12269519All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300013100|Ga0157373_11403862All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300013297|Ga0157378_11499595All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300014166|Ga0134079_10261286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium753Open in IMG/M
3300015357|Ga0134072_10157163All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium754Open in IMG/M
3300015371|Ga0132258_10338957All Organisms → cellular organisms → Bacteria → Proteobacteria3714Open in IMG/M
3300015371|Ga0132258_10500309All Organisms → cellular organisms → Bacteria3039Open in IMG/M
3300015371|Ga0132258_11122942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1987Open in IMG/M
3300015373|Ga0132257_100181489All Organisms → cellular organisms → Bacteria2483Open in IMG/M
3300015373|Ga0132257_101680539All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300015373|Ga0132257_104554155All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300015374|Ga0132255_100099817All Organisms → cellular organisms → Bacteria3940Open in IMG/M
3300015374|Ga0132255_106257393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300018431|Ga0066655_10941135All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300018482|Ga0066669_10911432All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300018482|Ga0066669_12125034All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300019877|Ga0193722_1008830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2556Open in IMG/M
3300021445|Ga0182009_10550540All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300022756|Ga0222622_10588598All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300025893|Ga0207682_10451560All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300025918|Ga0207662_11164799All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300025932|Ga0207690_11607514All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300025933|Ga0207706_11539941All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium541Open in IMG/M
3300025945|Ga0207679_10646048All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300025972|Ga0207668_10092266All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2228Open in IMG/M
3300025981|Ga0207640_10863867All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300025986|Ga0207658_10122448All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300026041|Ga0207639_10190454Not Available1752Open in IMG/M
3300026121|Ga0207683_10093627All Organisms → cellular organisms → Bacteria2677Open in IMG/M
3300026295|Ga0209234_1287929All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300026305|Ga0209688_1053666All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium755Open in IMG/M
3300026312|Ga0209153_1117256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1007Open in IMG/M
3300026316|Ga0209155_1285016All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium513Open in IMG/M
3300026523|Ga0209808_1159939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium845Open in IMG/M
3300026524|Ga0209690_1203175All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300026527|Ga0209059_1173542All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300026530|Ga0209807_1019182All Organisms → cellular organisms → Bacteria3343Open in IMG/M
3300026530|Ga0209807_1139941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium944Open in IMG/M
3300026550|Ga0209474_10258829All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1065Open in IMG/M
3300028380|Ga0268265_10862558All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300028589|Ga0247818_10763022All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300028592|Ga0247822_11041639All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300028592|Ga0247822_11750279All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300030916|Ga0075386_12193735All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300031226|Ga0307497_10614607All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300031231|Ga0170824_102467919All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300031562|Ga0310886_10234712All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1018Open in IMG/M
3300031719|Ga0306917_11070619All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium628Open in IMG/M
3300031771|Ga0318546_10659833All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300031890|Ga0306925_11095653All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium805Open in IMG/M
3300031908|Ga0310900_11482820All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300031946|Ga0310910_10093342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2220Open in IMG/M
3300032012|Ga0310902_11023428All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300032012|Ga0310902_11073974All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300032059|Ga0318533_10633379All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300032059|Ga0318533_10940711All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300032179|Ga0310889_10576854All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300032179|Ga0310889_10719481All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300032261|Ga0306920_101061706All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300032261|Ga0306920_102486582All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300033289|Ga0310914_10511148All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1086Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.25%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.30%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.30%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.31%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.65%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.32%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.32%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.66%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.66%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_097009002170459010Grass SoilAAIQFRTAADQRGGIIPLVIDPNVPYTPYCAHNPSQTCTPPPVNISQELFALPDNPFGVPPAWYYRVIVSGSVTTAQ
AP72_2010_repI_A001DRAFT_102480523300000893Forest SoilVSWTALQFNFRQPLTNAGGTIPLVVNPNVFYTPYCTEDYAPTCTRPPGDISQERFALPDNLYNVVPGFFYRVVVSGSVTAR*
AP72_2010_repI_A001DRAFT_107141913300000893Forest SoilLGRPNSWTYLQFNFRQPLTNLGGNIPLEINPNAQYTPYCDNSLQNPCAPPPTTISQELFAMPEGPFTVHPAWYYRVIVSGSVTTQ*
JGI24036J26619_1001945723300002128Corn, Switchgrass And Miscanthus RhizospherePWPNGFLPTFVNNRSTASXMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0062593_10018448223300004114SoilLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0062590_10041086723300004157SoilTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0062590_10054743543300004157SoilAQPLTNAGGTIPLVVNPNVPYTPFCTEDYLPPCTPPPANISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0062590_10266975413300004157SoilLQFNFAQPLTNADGTIPLIVNPNVAYTPYCHYYPAPGCTPPPANTSQETFTLPDNFYNVETAWYYRVIVSGTVTAQ*
Ga0062595_10164000413300004479SoilALQNPVTNTPVSWTYLQFNLAQPLTNAGGTIPLVVNPNVPYTPFCTEDYLPPCTPPPANISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0062592_10248464213300004480SoilNGWKPTFVDDWSTASLMSLQNPVTSGINIPPSWTLLQFNFAQALTNAGGTIPLVINPNVPYTEYCAHNPAPNCTPPPGTISQELFALPDNPFFVAPVWYYRVIVSGTVTAQ*
Ga0066673_1029327623300005175SoilDDWSTASLMSLQNPVTSGLNIPPSWTLLQFNFAQPGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGWAPEWYYRVIVSGTVTAQ*
Ga0066673_1081166113300005175SoilLLQFNFAQPLTNAGGTIPLGINPDAPYTPHCAHNPSPTCTPPRVDISQELFALPDNPFGVPPAWYYRVIVSGTVTAQ*
Ga0066684_1033217813300005179SoilPNGFMPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQLLTNAGGTIPLVINPNVAYTPYCTEDYSPTCTPPPGNISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ*
Ga0066684_1050942513300005179SoilPNGFMPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ*
Ga0070676_1105332113300005328Miscanthus RhizosphereWYYYPWPNTDWPTFVNNGSRASVMSLQNPVTSGLNIPPSWTLLQFNFKQALTNAGGTIPLVLDPNVAYTPHCAHNPSPTCNPPPTDISQELFALPDNPFGVPPVWYYRVIVSGSVTAQ*
Ga0066388_10721185813300005332Tropical Forest SoilFVDNWSTASEMALQNPVTETPVSWTYLQFNFAQPLTNAGGTIPLVVNPNVPYTPFCTEDYSPTCTPPPGDISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ*
Ga0068868_10193047923300005338Miscanthus RhizosphereFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0070675_10001706813300005354Miscanthus RhizosphereASLMSLQNPVTSGINIPPSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0070675_10123238513300005354Miscanthus RhizosphereGINIPPSWTLLQFNFAQALTNAGGTIPLVINPNVPYTQWCAHNPAPNCTPPPGTISQELFALPDNPFFVAPVWYYRVIVSGTVTAQ*
Ga0070671_10204110313300005355Switchgrass RhizosphereQPLTNAGGTIPLVVDPNVAYTPYCTEDYAPTCTQPPAHISQERFALPDNLYGVVPGFYYRVIISGTVTAPVN*
Ga0070659_10129017513300005366Corn RhizosphereAPQKFYYYPWPNTDWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGATIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0070694_10107867813300005444Corn, Switchgrass And Miscanthus RhizosphereMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0066682_1086812613300005450SoilFMPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLGIEPNVQYTPYCAHNPSQTCAPPPTNISQELFALPDNYFNVPPAWYYRVIVSGSVMAQ*
Ga0066681_1077834723300005451SoilMPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ*
Ga0066687_1013481513300005454SoilSWTYLQFNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVISGTVTAQ*
Ga0070678_10183711923300005456Miscanthus RhizosphereSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0068867_10073055013300005459Miscanthus RhizosphereVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0066699_1107574013300005561SoilTYLQFNFAQPLTNAGGIIPLVVNPNVAYSPYCTEDYSPTCTPPPATISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ*
Ga0070664_10061720623300005564Corn RhizosphereVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0066693_1012078123300005566SoilPVTSGLNIPPSWTLLQFNFAQALTNAGGTIPLGIEPNVQYTPYCAHNPSQTCAPPPTNISQELFALPDNYFNVPPAWYYRVIVSGSVMAQ*
Ga0066705_1020685613300005569SoilPNGFMPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVINPNVAYTPYCTEDYSPTCTPPPGNISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ*
Ga0066705_1040251623300005569SoilDDWSTASLMSLQNPVTSGLNIPPSWTLLQFNFAQPLTNAGGTIPLVINPDAPYTPHCAHNPSPTCTPPRVDISQELFALPDNPFGVPPAWYYRVIVSGTVTAQ*
Ga0070702_10111635613300005615Corn, Switchgrass And Miscanthus RhizospherePWPNTDWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0068859_10057250713300005617Switchgrass RhizosphereYSLRPTFVNASSTASLMALQNPVTSGLGIPPSYTLLRFDFAQPLTNAGGTIPLVIDPNVAYTPYCWINPWPTCTPPPENISQELFALPDNIWGVRPAWYWRVIVSGSVTAQ*
Ga0068859_10098573913300005617Switchgrass RhizosphereMPTFVSNGSGASVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0068859_10119968313300005617Switchgrass RhizosphereFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0068866_1104291213300005718Miscanthus RhizosphereYYYPWPNTDWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0068861_10031870723300005719Switchgrass RhizosphereLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0066903_10033544843300005764Tropical Forest SoilSLMSLQNPVTSGLGIPNSWTLLQFNFAQPLTNAGGTIPLLIDPNVQYTPYCDNTPRNPCAPPPTNISQELFALPENEFNVPPAWYYRVIVSGSVTAQ*
Ga0066903_10654677923300005764Tropical Forest SoilSWTLLQFNFAQPLTNAGGTIPLVINPNVPYTPYCAQNPSQTCTPPRTNISQELFALPDNPFNVPPAWYYRVIVSGSVTAQ*
Ga0066903_10879796713300005764Tropical Forest SoilASKMALQNPVTNTPVSWTYLQFNFKQALTNAGGTIALVVKPDAVYTPYCTEDYSPTCTPPPADISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0068863_10207247013300005841Switchgrass RhizosphereWPNGFLPTFVNNRSTASEMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFAYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0068862_10267277723300005844Switchgrass RhizosphereISWTTLQFNFAQPLTNAGGTVPLIINPNVAYTPYCLSDLLPTCTPPPANISQERFALPENPWVVSAFYWRVIVSGTVTAQ*
Ga0070717_1023596913300006028Corn, Switchgrass And Miscanthus RhizosphereHYYYPWPNTDWPTFVSNGSGASVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0066652_10093763023300006046SoilMPTFVDDWSTASLMSLQNPVTSGLNIPPSWTLLQFNFAQPLTNAGGTIPLVINPAAPYTPHCAHNPSPTCTPPRVDISQELFALPDNPFGVPPAWYYRVIVSGTVTAQ*
Ga0066653_1073356413300006791SoilKQALTNAGGTIPLVIDPNVAYTPYCAHNPSQTCAPPPTDISQELFALPDNPFGVPPAWYYRVIVSGSVMAQ*
Ga0066660_1082762923300006800SoilNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVISGTVTAQ*
Ga0075421_10105994523300006845Populus RhizosphereLYFYPWPNGSKPTVLDDWSTASVMSLKNPVTPLPISWTALQFNFAQPLTNAGGTIPLVVNPTVAYTPYCLSDLSPTCVPPPTNISQERFALPENPWVVPAFYWRVIVSGTVTAQ*
Ga0075420_10021294513300006853Populus RhizosphereTPLPISWTALQFNFAQPLTNAGGTIPLVVNPTVVYTPYCLSDLLPTCVPPPTDISQERFALPENPWVVSAFYYRTIVSGTVVAQ*
Ga0075425_10134070113300006854Populus RhizosphereAQPLTNAGGTIPLVVNPNVAYTPYCTEDYAPTCTQPPAHISQERFALPDNLYGVVPGFYYRVIISGTVTAPVN*
Ga0075435_10123687613300007076Populus RhizosphereLQFNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYAPTCTQPPANISQERFALPDNLYGVVPGFYYRVIISGTVTAPVN*
Ga0075435_10195014613300007076Populus RhizosphereLQFNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPANTSQESFALPDNLYGVQTGFFYRVVVSGSVTAQ*
Ga0066710_10198236423300009012Grasslands SoilVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ
Ga0075418_1207000923300009100Populus RhizosphereLQLNFAQPLTNAGGTIPLVINPNVPYTPYCAQNPSQACTPPPDNISQELFALPDNIWGVRPAWYYRVIVSGTVTAQ*
Ga0105247_1015160033300009101Switchgrass RhizosphereFVNNSSTASQMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0114129_1014275523300009147Populus RhizosphereMFLMNPVTDLPISWTTLQFNFAQPLTNAGGTIPLVINPDVVYTPYCLSDLSPTCVPPPTDISQERFALPENPWVVSAFYYRVIVSGTVVAQ*
Ga0111538_1119987313300009156Populus RhizosphereTLQFNFAQPLTNAGGTIPLVVNPTVVYTPYCLSDLLPTCVPPPANISQERFALPENPWVVSAFYWRVIVSGSVIAQ*
Ga0126374_1187394113300009792Tropical Forest SoilVTNDPVSWTYLQFNFAQPLTNAGGTIALVVNPNVVYTPYCTEDYSPTCTPPPANISQERFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0126382_1158498413300010047Tropical Forest SoilMSLQNPVTSGLGIPNSWTLLQFNFRQPLTNAGGTIPLLVDPTVQYTPYCDNTPWNPCAPPPTTISQELFALPENPYVHQAWYYRVIVSGSVTAQ*
Ga0126373_1226944913300010048Tropical Forest SoilMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVNPNVVYTPYCTEDYSPTCTPPPANISQENFALPDNLYGVVPGFFYRVVVSGTVTAQ*
Ga0134109_1046787913300010320Grasslands SoilFNFAQPGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGVPPVWYYRVIVSGSVTAQ*
Ga0134064_1014494613300010325Grasslands SoilGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGWAPEWYYRVIVSGSVTAQ*
Ga0134065_1041087523300010326Grasslands SoilLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGVPPVWYYRVIVSGTVTAQ*
Ga0134065_1041689313300010326Grasslands SoilVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ*
Ga0134062_1019205413300010337Grasslands SoilQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVISGTVTAQ*
Ga0126378_1339218913300010361Tropical Forest SoilNPVTNTPVSWTALQFNFRQPLTNAGGTIPLVVNPNVFYTPYCTEDYSPACTPPPGDISQERFALPDNLYNVVPGFFYRVVVSGSVTAR*
Ga0126379_1108037823300010366Tropical Forest SoilGIPNSWTLLQFNFAQPLTNAGGTIPLLVDPIVQYTPYCDNTPWNPCAPPPTNISQELFALPENEFNVPPAWYYRVIVSGSVTTQ*
Ga0126379_1339841613300010366Tropical Forest SoilFNATFVSNSSTASKMALQNPVTNTPVSWTYLQFNFKQALTNAGGTIPLVVNPNVPYTPFCTEDYSPTCTPLPADISQERFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0134125_1259981413300010371Terrestrial SoilMSLQNPVTSGLNIPPSWTLLQFNFKQALTNAGGTIPLVIDPNAPYTPHCANNPSPTCNPPKTNISQELFALPDNPFGVPPVWYYRVIVSGSVTAQ*
Ga0126381_10162505813300010376Tropical Forest SoilTASLMSLQNPVTSGLNIPNSWTLLQFNFAQPLTNAGGTIPLLVDPNVQYTPYCDNTPWNPCAPPPTTISQELFALPENEFNVPPAWYYRVIVSGSVTAQ*
Ga0126381_10356972913300010376Tropical Forest SoilPLTNAGGTIPLLIDPNVQYTPYCDNTPWNPCTPPPTTISQELFALPENEFNVPPAWYYRVVVSGSVTAQ*
Ga0126383_1041635413300010398Tropical Forest SoilTYLQFNFAQPLTNAGGTIPLVVNPNVPYTPFCTEDYSPTCTPPPGDISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0126383_1360929513300010398Tropical Forest SoilTFVDDWSTASEMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVDPIVAYTPYCTEDYAPTCTRPPGNISQESFALPDNLYNVVPGFFYRAVVSGSVTAQ*
Ga0126383_1364195123300010398Tropical Forest SoilPTFVDNWSTASEMALQNPVTNVPVSWTALQFNFAQPLTNAGGTIPLVVNPNVVYTPYCTEDYAPTCTPPPANISQERFALPDNLYNVVPGFFYRVVVSGTVTAQ*
Ga0134121_1264470413300010401Terrestrial SoilMSLQNPVTSGLGIPNSWTLLQFNFKQALTNAGGTIPLVIDPNAPYTPHCANNPSPTCNPPKTNISQELFALPDNPFGVPPVWYYRVIVSGSVTAQ*
Ga0137381_1102469423300012207Vadose Zone SoilSWTALQFNFAQPLTNAGGTIPLVINPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVISGTVTAQ*
Ga0137376_1060800623300012208Vadose Zone SoilMSLQNPVTSGLNIPPSWTLLQFNFAQALTNAGGTIPLVINPNVPYTPYCAINPSPTCTPPPGNISQELFALPDNPFGVVPAWYYRAIVSGSVTAQ*
Ga0137376_1062480913300012208Vadose Zone SoilLMSLQNPVTSGLNIPPSWTLLQFNFAQPGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGVPPVWYYRVIVSGTVTAQ*
Ga0137370_1078962423300012285Vadose Zone SoilQNPVTSGLNIPPSWTLLQFNFAQPGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGWAPEWYYRVIVSGTVTAQ*
Ga0150984_10124788713300012469Avena Fatua RhizosphereMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVTPNVAYSPYCTEDYSPTCTRPPAQVSQESFALPDNLYGVVPGFYYRVIISGTVTAQ*
Ga0157338_109503013300012515Arabidopsis RhizosphereNNDLSKASVMVLQNPVTSGLGIPNSWTLLQFNFKQALTNAGGTIPLVVDPNAGYTPYCDNTPRNPCAPPPPTISQELFALPENQFNVPPAWYYRVIVSGSVTAQ*
Ga0157304_111726113300012882SoilVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCHYYPAPGCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0164301_1044613513300012960SoilIPPSWTLLQFNFKQALTNAGGTMTIPLVIDPNVPYTPHCANNPSPTCTPPPENISQELFALPDNPFGVPPVWYYRVIVSGSVTAQ*
Ga0126369_1156345113300012971Tropical Forest SoilMSLQNPVTSGLGIPNSWTLLQFNFAQPLTNAGGTIPLLIDPNVQYTPYCDNTPRNPCAPPPTNISQELFALPENEFNVPPAWYYRVIVSGSVTTQ*
Ga0134087_1030241413300012977Grasslands SoilSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ*
Ga0134087_1053248423300012977Grasslands SoilQFNFAHALTNLRETIPLVVDPTFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVSAR*
Ga0164308_1121266923300012985SoilWPNTDWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0164304_1180359013300012986SoilNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQALTNAGGTIPLVINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0164307_1046891333300012987SoilQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVNPNVPYTPYCTEDYSPTCTPPPPNISQESFALPDNLYGVPTGFFYRIIVSGSVMAQ*
Ga0164307_1069189923300012987SoilVSWTLLQFNFAQALTNAGGTIPLIVNPNVAYTPYCNYYPAPECTPPPANISQETFTLPDNFYNVETAWYYRVIVSGTVTAQ*
Ga0164305_1226951913300012989SoilMALQNPVTSGLGIPNSWTLLQFNFRQPLTNAGGTIPLWIDPNVQYTPYCAHNPSQTCTPPPTNISQELFTLPENQFNVPPAWYYRVIVSGSVTAPAQ*
Ga0157373_1140386213300013100Corn RhizosphereTNTPVSWTYLQFNFKQPLTNAGGTIPLVVDPNVAYTPYCTDDYAPTCTQPPTHISQERFALPDNLYGVVPGFDYRVIISGTVTAQDIIQ*
Ga0157378_1149959513300013297Miscanthus RhizosphereMALQNPVTSGLGIPNSWTLLQFNFKQALTNAGGTIPLVVDPNAGYTPYCDNTPRNPCAPPPPTISQELFALPENQFNVPPAWYYRVIVSGSVTAPAQ*
Ga0134079_1026128613300014166Grasslands SoilFAHALTNLRETIPLVVDPTFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR*
Ga0134072_1015716323300015357Grasslands SoilFNFAQALTNAGGTIPLGIEPNVQYTPYCAHNPSQTCAPPPTNISQELFALPDNPFGVPPAWYYRVIVSGSVMAQ*
Ga0132258_1033895733300015371Arabidopsis RhizospherePPSWTLLQFNFKQALTNAGGTIPLVVDPNVAYTPWCAHNPSPTCNPPPTNISQELFALPDNPFGVAPVWYYRVIVSGSVTAQ*
Ga0132258_1050030913300015371Arabidopsis RhizosphereWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLVINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ*
Ga0132258_1112294233300015371Arabidopsis RhizosphereTASEMALQNPVTNTPVSWTYLQFNFAQLLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPGNISQENFALPDNLYGVQTGFFYRVVVSGSVTAQ*
Ga0132257_10018148953300015373Arabidopsis RhizosphereYYYPWPNGFMPTFVDNWSTASEMALQNPVTNVPVSRTYLQFNFAQPLTNAGGTIPLVVNPNVPYTPFCTEDYLPPCTPPPANISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0132257_10168053913300015373Arabidopsis RhizosphereKFYYYPSPSDQPTFVNNSSTASLMALQNPVTSGLGIPNSWTLLQFNFAQPLTNADGTIPLEVDPNAQYTPYCDNNQSPCAPPPTTISQELFALPEGPFTAHPEWYYRVIVSGSVTTQ*
Ga0132257_10455415513300015373Arabidopsis RhizosphereQFNFKQALTNAGGTIPLVVDPNVAYTPWCAHNPSPTCNPPPTNISQELFALPDNPFGVAPVWYYRVIVSGSVTAQ*
Ga0132255_10009981713300015374Arabidopsis RhizosphereSTASKMALQNPVTNTPVSWTYLQLNLAQPLTNAGGTIPLVVNPNVPYTPFCTEDYLPPCTPPPANISQESFALPDNLYGVPTGFFYRIVVSGSVTAQ*
Ga0132255_10625739313300015374Arabidopsis RhizosphereLQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPGNISQENFALPDNLYGVQTGFFYRVVVSGSVTAQ*
Ga0066655_1094113523300018431Grasslands SoilDDWSTASLMSLQNPVTSGLNIPPSWTLLQFNFAQPLTNAGGTIPLVINPDAPYTPHCAQNPSPTCTPPRVDISQELFALPDNPFGVPPAWYYRVIISGTVVAQ
Ga0066669_1091143213300018482Grasslands SoilNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ
Ga0066669_1212503413300018482Grasslands SoilTSGLNIPPSWTLLQFNFAQALTNAGGTIPLGIEPNVQYTPYCAHNPSQTCAPPPTNISQELFALPDNYFNVPPAWYYRVIVSGSVMAQ
Ga0193722_100883043300019877SoilFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ
Ga0182009_1055054013300021445SoilVTSGLNIPPSWTLLQFNFKQALTNAGGTIPLVVDPNVAYTPHCANNPSPTCNPPPTNISQELFALPDNPFGVPPAWYYRVIVSGSVTAQ
Ga0222622_1058859823300022756Groundwater SedimentQFNFAQALTNAGGTIPLVINPNVPYTPSCAHNPSPTCTPPPENISQELFALPDNPFGVPPAWYYRVVVSGTVTAQ
Ga0207682_1045156023300025893Miscanthus RhizosphereNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207662_1116479923300025918Switchgrass RhizosphereSVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207690_1160751413300025932Corn RhizosphereYCPWPNTDWPTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGATIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207706_1153994123300025933Corn RhizosphereQNPVTNTPVSWTYLQFNFKQPLTNAGGTIPLVVDPNVAYTPYCTEDYAPTCTQPPAHISQERFALPDNLYGVVPGFYYRVIISGTVTAQDIIQ
Ga0207679_1064604813300025945Corn RhizosphereVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207668_1009226633300025972Switchgrass RhizosphereYYPWPNGFMPTFVSNGSGASVMALQNPVTNTPVSWTYLQFNFKQPLTNAGGTIPLVVDPNVAYTPYCTEDYAPTCTQPPAMISQERFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0207640_1086386733300025981Corn RhizosphereNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0207658_1012244823300025986Switchgrass RhizosphereTFVNNTSTASVMRLQNPVTNIPVSWTLLQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207639_1019045423300026041Corn RhizosphereQFNFAQPLTNAGGTIPLIINPNVAYTPYCTYDPSPTCTPPPANISQERFSLPDNLYGVVTAFYYRVIVSGTVTAQ
Ga0207683_1009362713300026121Miscanthus RhizosphereSWTLLQFNFEQALTNAGGTIPLVVDPNAGYTPYCDNTPRNPCAPPPPTISQELFALPENQFNVPPAWYYRVIVSGSVTAQ
Ga0209234_128792913300026295Grasslands SoilPNGSMPTFVDDWSTASLMSLQNPVTSGLNIPPSWTLLQFNFAQPGLTNAGGTIPLVIDPNDPYTPWCAHNPSPTCTPPRVNISQELFALPDNPFGVPPVWYYRVIVSGTVTAQ
Ga0209688_105366613300026305SoilPPSWTLLQFNFAQALTNAGGTIPLGIEPNVQYTPYCAHNPSQTCAPPPTNISQELFALPDNYFNVPPAWYYRVIVSGSVMAQ
Ga0209153_111725623300026312SoilSWTYLQFNFKQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCMPPPATISQESFALPDNLYGVVPGFYYRVVVSGSVTAQ
Ga0209155_128501613300026316SoilFNFAQLLTNAGGTIPLVINPNVAYTPYCTEDYSPTCTPPPGNISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ
Ga0209808_115993933300026523SoilPTFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ
Ga0209690_120317513300026524SoilLQFNFAQPLTNAGGTIPLVVNPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVISGTVTAQ
Ga0209059_117354223300026527SoilLNIPPSWTLLQFNFAQALTNAGGTIPLVINPNVPYTPYCAINPSPTCTPPPGNISQELFALPDNPFGVVPAWYYRAIVSGSVTAQ
Ga0209807_101918213300026530SoilFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVINPNVAYTPYCTEDYSPTCTPPPGNISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ
Ga0209807_113994113300026530SoilFVDNWSTASEMALQNPVTNTPVSWTYLQFNFAQALTNAGGTIPLVVDPNVAYTPYCTEDYSPTCTPPPAKISQESFALPDNLYGVPTGFFYRVVVSGSVTAQ
Ga0209474_1025882913300026550SoilPNGFMPTFVNDRSTASEMALQNPVTNTPVSWTYLQFNFAQPLTNAGGIIPLVVNPNVAYTPYCTEDYSPTCTPPPANISQESFALPDNLYGVVPGFFYRVVVSGSVTAQ
Ga0268265_1086255823300028380Switchgrass RhizosphereMFLMNPVTDLPISWTTLQFNFAQPLTNAGGTVPLIINPNVAYTPYCLSDLLPTCTPPPANISQERFALPENPWVVSAFYWRVIVSGTVTAQ
Ga0247818_1076302223300028589SoilASVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0247822_1104163923300028592SoilVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0247822_1175027913300028592SoilPGIPNSWTYLQFNFRQPLTNLGGNIPLEINPNAQYTPYCDNNQSPCAPPPTTISQELFALPEGPFTAHPEWYYRVIVSGSVTTQ
Ga0075386_1219373523300030916SoilLTNAGGEIPLVVDPTFVYTPYCTEDYWPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0307497_1061460713300031226SoilAGGTVPLVINPNVPYTPYCAINPWPTCTPPPANISQELFALPDNIWNIQPAWYYRVIVSGTVTAQ
Ga0170824_10246791913300031231Forest SoilPVSWTYLQFNFAQALTNAGGTIPLVVNPNVVYTPYCTEDYSPTCTPPPPNISQESFALLDNLCDVVPGFFYRVVISGSVTAQ
Ga0310886_1023471213300031562SoilDGSTASVMFLMNPVTDLPISWTTLQFNFAQPLTNAGGTIPLVVNPTVVYTPYCLSDLSPTCVPPPADIAQERFALPETPWVVSAFDYRTIVSGTVVAQ
Ga0306917_1107061923300031719SoilNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVINPNVVYTPYCTEDYSPTCTPPPANISQESFALPDNLYNVVPGFFYRAVVSGSVTAQ
Ga0318546_1065983323300031771SoilMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVINPNVVYTPYCTEDYSPTCTPPPANISQESFALPDNLYNVVPGFFYRAVVSGSVTAPPR
Ga0306925_1109565333300031890SoilLQFNFAQPLTNAGGTIPLVVDPNAQYNPYCDNTQWNPCAPPPTTISQELFALPENEFNVHPAWYYRVIVSGSVTAQ
Ga0310900_1148282013300031908SoilVMSLKNPVTPLPISWTTLQLNFAQPLTNAGGTIQLVVDPTVLYTPYCLSDLLPTCVPPPANISQERFALPENPWVVSAFYWRVIVSGSVIAQ
Ga0310910_1009334223300031946SoilSTASKMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVINPNVVYTPYCTEDYSPTCTPPPANISQESFALPDNLYNVVPGFFYRAVVSGSVTAQ
Ga0310902_1102342813300032012SoilHSSVMSLKNPVTPLPISWTTLQLNFAQPLTNAGGTIQLVVDPTVLYTPYCLSDLLPTCVPPPANISQERFALPENPWVVSAFYWRVIVSGSVIAQ
Ga0310902_1107397413300032012SoilTFVSNGSGASVMALQNPVTNTPVSWTYLQFNFAHALTNLRETIPLVVDPNFVYTPYCTEDYAPTCTPPRGDISQESFALPDNLYNVVPGFFYRIIVSGTVTAR
Ga0318533_1063337913300032059SoilSNWSTASLMSLQNPVTSGLGIPNSWTLLQFNFAQPLTNAGGTIPLLVDPNFQYTPYCDNTPWNPCTPPPTDISQELFALPDNLFGVPPAWYYRVVVSGSVTAQ
Ga0318533_1094071123300032059SoilASKMALQNPVTNTPVSWTYLQFNFAQPLTNAGGTIPLVVINPNVVYTPYCTEDYSPTCTPPPANISQESFALPDNLYNVVPGFFYRAVVSGSVTAQ
Ga0310889_1057685413300032179SoilPLTNAGGTIPLVVNPTVVYTPYCLSDLLPTCVPPPADIAQERFALPENPWVVSAFYYRVIVSGTVVAQ
Ga0310889_1071948113300032179SoilVTVVDAGSTASVMSLKNPVTPLPISWTTLQLNFAQPLTNAGGTIQLVVDPTVLYTPYCLSDLLPTCVPPPANISQERFALPENPWVVSAFYWRVIVSGSVIAQ
Ga0306920_10106170613300032261SoilIRGRCCNSISPPAQPLTNAGGTIPLVVDPNAQYNPYCDNTQWNPCAPPPTTISQELFALPENEFNVHPAWYYRVIVSGSVTAQ
Ga0306920_10248658223300032261SoilMSLQNPVTSGLNIPNSWTLLQFNFAQPLTNAGGTIPLVINPDRPYTPYCAVNPDPTCTPPLPDISQELFALPENLFGVPPAWYYRVIVSGSVTAQ
Ga0310914_1051114823300033289SoilISPPAQPLTNAGGTIPLVVDPNAQYNPYCDNTQWNPCAPPPTTISQELFALPENEFNVHPAWYYRVIVSGSVTAQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.