Metagenome / Metatranscriptome Family F046267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	48 residues
Representative Sequence	MARQRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATI
Number of Associated Samples	134
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.78 %
% of genes near scaffold ends (potentially truncated)	99.34 %
% of genes from short scaffolds (< 2000 bps)	89.40 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.040 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.907 % of family members)
Environment Ontology (ENVO)	Unclassified (20.530 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.033 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.21% β-sheet: 0.00% Coil/Unstructured: 64.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF02826	2-Hacid_dh_C	33.77
PF00296	Bac_luciferase	7.95
PF13193	AMP-binding_C	4.64
PF00970	FAD_binding_6	3.97
PF00496	SBP_bac_5	3.31
PF00111	Fer2	3.31
PF01314	AFOR_C	2.65
PF00355	Rieske	1.99
PF13185	GAF_2	1.99
PF02515	CoA_transf_3	1.99
PF13561	adh_short_C2	1.32
PF08240	ADH_N	1.32
PF01019	G_glu_transpept	1.32
PF05378	Hydant_A_N	1.32
PF04199	Cyclase	1.32
PF00561	Abhydrolase_1	0.66
PF14588	YjgF_endoribonc	0.66
PF02653	BPD_transp_2	0.66
PF13544	Obsolete Pfam Family	0.66
PF03130	HEAT_PBS	0.66
PF02779	Transket_pyr	0.66
PF02630	SCO1-SenC	0.66
PF13785	DUF4178	0.66
PF13518	HTH_28	0.66
PF07992	Pyr_redox_2	0.66
PF01738	DLH	0.66
PF05598	DUF772	0.66
PF00275	EPSP_synthase	0.66
PF13458	Peripla_BP_6	0.66
PF04392	ABC_sub_bind	0.66
PF00072	Response_reg	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	7.95
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	2.65
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	2.65
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.99
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.32
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	1.32
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.04 %
Unclassified	root	N/A	5.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.04 %
Unclassified	root	N/A	5.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.04 %
Unclassified	root	N/A	5.96 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	52.98 %
Unclassified	root	N/A	5.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	52.98 %
Unclassified	root	N/A	5.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	52.98 %
Unclassified	root	N/A	5.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.32 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.80 %
Unclassified	root	N/A	5.96 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.66 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.80 %
Unclassified	root	N/A	5.96 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.66 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0837901	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	882	Open in IMG/M
3300004114\|Ga0062593_100343850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1300	Open in IMG/M
3300004633\|Ga0066395_10062322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1689	Open in IMG/M
3300005171\|Ga0066677_10036187	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005171\|Ga0066677_10453556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	734	Open in IMG/M
3300005174\|Ga0066680_10264566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1094	Open in IMG/M
3300005180\|Ga0066685_10898575	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005186\|Ga0066676_10840685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	619	Open in IMG/M
3300005294\|Ga0065705_10528896	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005332\|Ga0066388_105781916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300005334\|Ga0068869_100412952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1112	Open in IMG/M
3300005353\|Ga0070669_101182442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	660	Open in IMG/M
3300005444\|Ga0070694_101314188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	608	Open in IMG/M
3300005445\|Ga0070708_100223649	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300005447\|Ga0066689_10935312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	535	Open in IMG/M
3300005468\|Ga0070707_101185051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	730	Open in IMG/M
3300005529\|Ga0070741_10466555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1148	Open in IMG/M
3300005536\|Ga0070697_100129939	All Organisms → cellular organisms → Bacteria → Proteobacteria	2112	Open in IMG/M
3300005536\|Ga0070697_100403863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1186	Open in IMG/M
3300005545\|Ga0070695_101786671	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300005558\|Ga0066698_10788366	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005559\|Ga0066700_10444562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	910	Open in IMG/M
3300005561\|Ga0066699_10887889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300005575\|Ga0066702_10022501	All Organisms → cellular organisms → Bacteria	3104	Open in IMG/M
3300005586\|Ga0066691_10727245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300005617\|Ga0068859_102931270	Not Available	522	Open in IMG/M
3300005618\|Ga0068864_100998645	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	830	Open in IMG/M
3300005713\|Ga0066905_101058001	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300005764\|Ga0066903_104376676	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005876\|Ga0075300_1048807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300005880\|Ga0075298_1002383	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005887\|Ga0075292_1026728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	780	Open in IMG/M
3300006047\|Ga0075024_100547515	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006796\|Ga0066665_10859350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300006800\|Ga0066660_11534841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	525	Open in IMG/M
3300006806\|Ga0079220_11068090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300006845\|Ga0075421_101752507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300006846\|Ga0075430_100332056	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300006846\|Ga0075430_100371289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1181	Open in IMG/M
3300006847\|Ga0075431_102009786	Not Available	533	Open in IMG/M
3300006852\|Ga0075433_11579468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	566	Open in IMG/M
3300006894\|Ga0079215_10156739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1096	Open in IMG/M
3300006894\|Ga0079215_10366440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	833	Open in IMG/M
3300006904\|Ga0075424_101831624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	642	Open in IMG/M
3300006918\|Ga0079216_10397895	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006969\|Ga0075419_10182072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300007255\|Ga0099791_10547948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300009012\|Ga0066710_101682934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	967	Open in IMG/M
3300009012\|Ga0066710_101692008	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	963	Open in IMG/M
3300009137\|Ga0066709_104005643	Not Available	535	Open in IMG/M
3300009143\|Ga0099792_10109561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1465	Open in IMG/M
3300009147\|Ga0114129_11283303	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300009147\|Ga0114129_12667146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300009147\|Ga0114129_13389753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	513	Open in IMG/M
3300009808\|Ga0105071_1035649	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009809\|Ga0105089_1054289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300009810\|Ga0105088_1010431	Not Available	1371	Open in IMG/M
3300009815\|Ga0105070_1067223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300009818\|Ga0105072_1079482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300010043\|Ga0126380_10122210	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300010047\|Ga0126382_10213702	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300010047\|Ga0126382_11367448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300010141\|Ga0127499_1152804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300010303\|Ga0134082_10244143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300010322\|Ga0134084_10321507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	581	Open in IMG/M
3300010322\|Ga0134084_10389577	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010335\|Ga0134063_10280656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	798	Open in IMG/M
3300010358\|Ga0126370_10005775	All Organisms → cellular organisms → Bacteria	6250	Open in IMG/M
3300010358\|Ga0126370_12324056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300010359\|Ga0126376_10734921	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010361\|Ga0126378_11254234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300010366\|Ga0126379_10606138	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010376\|Ga0126381_103836935	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010398\|Ga0126383_10788381	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300010399\|Ga0134127_10853550	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300011269\|Ga0137392_11554207	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300011271\|Ga0137393_10635839	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300012096\|Ga0137389_10621591	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	928	Open in IMG/M
3300012206\|Ga0137380_10010546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8378	Open in IMG/M
3300012207\|Ga0137381_11471552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300012355\|Ga0137369_10073143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2895	Open in IMG/M
3300012363\|Ga0137390_11964115	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012582\|Ga0137358_10323158	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300012907\|Ga0157283_10352754	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	530	Open in IMG/M
3300012917\|Ga0137395_10025867	All Organisms → cellular organisms → Bacteria	3481	Open in IMG/M
3300012918\|Ga0137396_11162162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300012922\|Ga0137394_10422209	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012925\|Ga0137419_10199246	Not Available	1481	Open in IMG/M
3300012929\|Ga0137404_10061955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2905	Open in IMG/M
3300012948\|Ga0126375_10791512	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	750	Open in IMG/M
3300012971\|Ga0126369_12506141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	601	Open in IMG/M
3300012976\|Ga0134076_10587621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	518	Open in IMG/M
3300014154\|Ga0134075_10440603	Not Available	578	Open in IMG/M
3300014265\|Ga0075314_1075164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	698	Open in IMG/M
3300015241\|Ga0137418_10144554	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300015358\|Ga0134089_10024203	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300015374\|Ga0132255_102311430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300016422\|Ga0182039_10890413	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300017656\|Ga0134112_10449283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300017657\|Ga0134074_1292389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300018032\|Ga0187788_10027849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1836	Open in IMG/M
3300018074\|Ga0184640_10424462	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300018089\|Ga0187774_10073635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1602	Open in IMG/M
3300018433\|Ga0066667_10484551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1016	Open in IMG/M
3300018433\|Ga0066667_10652349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300018433\|Ga0066667_12332388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300019361\|Ga0173482_10540299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300019458\|Ga0187892_10333370	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300020580\|Ga0210403_10199515	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300021080\|Ga0210382_10512152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300021560\|Ga0126371_11582656	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300025791\|Ga0210115_1078766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	680	Open in IMG/M
3300025911\|Ga0207654_10183825	Not Available	1365	Open in IMG/M
3300025922\|Ga0207646_11001754	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	738	Open in IMG/M
3300025933\|Ga0207706_11338217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300026029\|Ga0208002_1021567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300026075\|Ga0207708_11499734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	592	Open in IMG/M
3300026324\|Ga0209470_1145058	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300026324\|Ga0209470_1170719	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300026497\|Ga0257164_1069660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300026524\|Ga0209690_1226372	Not Available	588	Open in IMG/M
3300026547\|Ga0209156_10431653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300027273\|Ga0209886_1022587	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300027643\|Ga0209076_1146690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300027654\|Ga0209799_1103898	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300027655\|Ga0209388_1077924	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300027873\|Ga0209814_10020674	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300027873\|Ga0209814_10517818	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300027874\|Ga0209465_10637276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300027875\|Ga0209283_10190946	Not Available	1361	Open in IMG/M
3300027903\|Ga0209488_10123274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1951	Open in IMG/M
3300027909\|Ga0209382_10125191	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300027909\|Ga0209382_11239726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	760	Open in IMG/M
3300027952\|Ga0209889_1070902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300028536\|Ga0137415_10622378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	891	Open in IMG/M
3300030505\|Ga0268245_10317468	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031720\|Ga0307469_10503964	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031720\|Ga0307469_11240720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	706	Open in IMG/M
3300031740\|Ga0307468_100415934	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031764\|Ga0318535_10137718	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031779\|Ga0318566_10106288	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300031799\|Ga0318565_10020965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2870	Open in IMG/M
3300031831\|Ga0318564_10286709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300031879\|Ga0306919_10072940	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300031903\|Ga0307407_11643726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300032025\|Ga0318507_10462698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300032068\|Ga0318553_10291351	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300032126\|Ga0307415_102295665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	529	Open in IMG/M
3300032180\|Ga0307471_100175394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300032205\|Ga0307472_100093780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2042	Open in IMG/M
3300032205\|Ga0307472_100727252	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.11%
Host-Associated	Host-Associated	15.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.46%
Plants	Host-Associated → Plants	15.89%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Sediment	Environmental → Aquatic → Sediment	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Marine	Environmental → Aquatic → Marine	0.66%
Cave	Environmental → Terrestrial → Cave	0.66%
Phylloplane	Host-Associated → Plants → Phylloplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.26%
Loam	Environmental → Terrestrial → Soil → Loam	10.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.64%
Sand	Environmental → Terrestrial → Soil → Sand	4.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.32%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026029	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030505	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.e (v2)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08379011	3300000033	Soil	MAPERITLKDPARFRDPANLTWERYIELQARERERYLAERAAIPAEALAYRTVGPRYLER
Ga0062593_1003438503	3300004114	Soil	MAPERITLKDPTRFRDPANLTWERYIALQARERERYLAERAAIPPEALAYR
Ga0066395_100623221	3300004633	Tropical Forest Soil	MARKRLVLKNTALFVDPANLSWERYVTMQARERERYLAERATIPDDALSYKTVSPRYLEN
Ga0066677_100361871	3300005171	Soil	MARSITLKHPERFKDPANLTWERYVALQARERERYLAERATIP
Ga0066677_104535561	3300005171	Soil	MARTITLKHPERFKDPANLTWERYVALQARERERYLAERATIP
Ga0066680_102645661	3300005174	Soil	MAHAPIVLNDPGRFKDPANLTWERYIALQTRERERYLTERATIPQGALDFTTV
Ga0066685_108985752	3300005180	Soil	MARRTIGLEDPSRFKDPAGLTWEPHIGLQARERERYLAERA
Ga0066676_108406851	3300005186	Soil	MARQRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATI
Ga0065705_105288962	3300005294	Switchgrass Rhizosphere	MARKRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEALSYR
Ga0066388_1057819161	3300005332	Tropical Forest Soil	MARRRVTLNDPSRFKDPSNLSWERYIALQARERERYLAERDALPPAALDFSGVKPGYLER
Ga0068869_1004129521	3300005334	Miscanthus Rhizosphere	MAPERITLKDPTRFRDPANLTWERYIALQARERERYLAERAAIPPEALAYRTVSPRYVER
Ga0070669_1011824422	3300005353	Switchgrass Rhizosphere	MARPRVELKDPSRFKDPANLTFERYIALQARERERYQAERAALPAEALEFRTVSPRYLER
Ga0070694_1013141881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MASQRLTLEDPTRFKDPAGLTWERYVALQARERERYLAERAAIPAEALAYRTVS
Ga0070708_1002236491	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MARERLTLRDTSRFKDPAGLTWERYVALQARERERYLAERAALPAEALAFR
Ga0066689_109353121	3300005447	Soil	MASQRLTLNDPTRFKDPAGLTWERYIALQARERERYLAER
Ga0070707_1011850512	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAPERITLKDPARFRDPANLTWERYIELQARERERYLAERAAIPAEALAYKTVGPRY
Ga0070741_104665553	3300005529	Surface Soil	MSRRRIVLKDPGLFKDPANLSWERYVALQARERERYLAERATLPQEALEYRSVSRRY
Ga0070697_1001299391	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARTITLKHPERFKDPANLTWERYVALQARERERYLAERATIPA
Ga0070697_1004038631	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARQRLTLRDTSRFKDPAGLTWERYVALQARERERYLAERAALP
Ga0070695_1017866711	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MARKRLVLKNTGLFSDPANLSWERYVSMQARERERYLAERTSIPDDAL
Ga0066698_107883661	3300005558	Soil	MVRRTIGLEDPSRFKDPAGLTWERYIGLQARERERYLAERA
Ga0066700_104445621	3300005559	Soil	MARTITLKNPERFKDPANLTWERYVALQARERERYLAERASIPADALAY
Ga0066699_108878892	3300005561	Soil	MLRKPITLKDPGRFKDPANLTWERYVALQARERERY
Ga0066702_100225011	3300005575	Soil	MARTITLKHPERFKDPANLTWERYVALQARERERYLA
Ga0066691_107272452	3300005586	Soil	MARQRQRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATIS
Ga0068859_1029312702	3300005617	Switchgrass Rhizosphere	MARPRVELKDPSRFKDPANLTFERYIALQARERERYQAERAAIPDDVLNF
Ga0068864_1009986451	3300005618	Switchgrass Rhizosphere	MAPERITLKDPARFRDPANLTWERYIALQARERDRYLAERGAIPPEALAFRTVGPRYVER
Ga0066905_1010580011	3300005713	Tropical Forest Soil	MARKRLVLKNTALFSDPANLSWERYVMMQARERERYLTERGAIPDDAL
Ga0066903_1043766761	3300005764	Tropical Forest Soil	MARKRLVLKNTALFVDPANLNWERYVTMQARERERYLVEKATI
Ga0075300_10488072	3300005876	Rice Paddy Soil	MARARITLRNPERFKDPANLTWERYIALQARERERYLAERAAI
Ga0075298_10023832	3300005880	Rice Paddy Soil	MARARITLRKPERFKDPANLTWERYIALQARERERYLAERAAI
Ga0075292_10267282	3300005887	Rice Paddy Soil	MAGKRIVLTDPSRFKDPANLNWERYVALQARERERYLAEK
Ga0075024_1005475151	3300006047	Watersheds	MARARITLREPERFKDPANLSWERYIALQARERERY
Ga0066665_108593502	3300006796	Soil	MTRKRLVLKNTALFSEPANLSWERYVVMQARERERYLPERATIPDDALNYKTVSPPHLH
Ga0066660_115348411	3300006800	Soil	MARQQISLKDPGRFKDPANLTWERYVALQARERERYLAERATIPADAMAYR
Ga0079220_110680902	3300006806	Agricultural Soil	MARKRLVLNNTALFSDPANLSWERYVVMQARERERYLAERATIPDDALSYKTVS
Ga0075421_1017525072	3300006845	Populus Rhizosphere	MARTITLKNPERFKDPANLTWERYVALQARERERYLAERATIPAEAMAYKTVSPRYLERA
Ga0075430_1003320562	3300006846	Populus Rhizosphere	MARRHITLKDPSRFKDPAGLTWERYIALQARERERYLAERAAIPADALAFRSVSPRYLE
Ga0075430_1003712891	3300006846	Populus Rhizosphere	MARTITLKNPERFKDPANLTWERYVALQARERERY
Ga0075431_1020097862	3300006847	Populus Rhizosphere	MARKRIVLKDPTRFKDPANLTWERYVSLQARERERYLAE
Ga0075433_115794681	3300006852	Populus Rhizosphere	MPHSRIVLNDPSRFKDPANLTWERYVALQARERERYLAER
Ga0079215_101567391	3300006894	Agricultural Soil	MARTRIVLNDPSRFKDPANLSWERYVALQARERERYLAERAALPA
Ga0079215_103664401	3300006894	Agricultural Soil	MARPRIVLRDPSRFKDPANLSWERYVALQARERERYLADRAALPEDALAYRTVSPRYL
Ga0075424_1018316242	3300006904	Populus Rhizosphere	MAHTPIVLRDPGRFKDPANLTWERYIALQTRERERYLAERATIPQGALD
Ga0079216_103978951	3300006918	Agricultural Soil	MATKRITLHDPTRFKDPANLSWERYVAMQARERERYLAEKATIPQEALEFKTVGPKYRERAI
Ga0075419_101820723	3300006969	Populus Rhizosphere	MARTRIVLNDPSRFKDPANLSWERYVALQARERERYQAERAAL
Ga0099791_105479482	3300007255	Vadose Zone Soil	MPSVRIVLRDPSRFKDPANLTWERYIALQARERERYLADRATIPPDAL
Ga0066710_1016829341	3300009012	Grasslands Soil	MARSITLKHPERFKDPANLTWERYVALQARERERYLAERATIPA
Ga0066710_1016920082	3300009012	Grasslands Soil	MQITLNDLSRFKDPASLTWERYVALQARERERYLAERAAIPAEAMAYQTVSRRYLE
Ga0066709_1040056432	3300009137	Grasslands Soil	MRIELKDPSRFKDPANLTWERYITMQARERERYLAEKATIPD
Ga0099792_101095613	3300009143	Vadose Zone Soil	MAETITLKNPERFKDPANLTWERYVALQARERERYLAE
Ga0114129_112833032	3300009147	Populus Rhizosphere	MARRHITLKDPSRFKDPAGLTWERYIALQARERER
Ga0114129_126671462	3300009147	Populus Rhizosphere	MARTITLKNPERFKDPANLTWERYVALQARERERYLAERATIPA
Ga0114129_133897532	3300009147	Populus Rhizosphere	MARHTITLEDPSRFKDPAGLTWERYIALQARERERYLTERASLPPDVLAFRSVTPR
Ga0105071_10356491	3300009808	Groundwater Sand	MARKKITLKDPSRFSDPANLTWERYVALQARERERYLAERAAIPPEALSYQTV
Ga0105089_10542891	3300009809	Groundwater Sand	MARKRLVLKDPGRFSDPASLTWERYVAMQARERERYMAERAAISQDALNYKTVSPQYLER
Ga0105088_10104313	3300009810	Groundwater Sand	MARKRLVLKDPGRFSDPAGLTWERYVAMQARERERYMAERAAISQDALNYK
Ga0105070_10672232	3300009815	Groundwater Sand	MARKRLVLKDPGRFSDPASLTWERYVAMQARERERYMAERAAISQDALNYKT
Ga0105072_10794821	3300009818	Groundwater Sand	MARKKITLKDPSLFADPANLTWERYVALQARERERYLAERATIPEDALNYK
Ga0126380_101222101	3300010043	Tropical Forest Soil	MARKRLVLENPALFVDPANLSWERYVTMQARERERYLAERATISDDA
Ga0126382_102137022	3300010047	Tropical Forest Soil	MARRRLVLKDTALFSDPASLSWERYVVMQARERERYLAERATIPDDALRY
Ga0126382_113674482	3300010047	Tropical Forest Soil	MARKRLVLENTALFSDPASLSWERYVVMQARERERYLAERATIPDDALRY
Ga0127499_11528042	3300010141	Grasslands Soil	MARRRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEALSY
Ga0134082_102441432	3300010303	Grasslands Soil	MAHAPIVLNDPGRFKDPANLTWERYIALQTRERERYLAERATIPQDALDFKSVNPRYLER
Ga0134084_103215071	3300010322	Grasslands Soil	MARQQITLNDPSRFKDPANLTWERYVALQARERERYLAERAAIPADAMAYQ
Ga0134084_103895771	3300010322	Grasslands Soil	MARRTIGLEDPSRFKDPAGLTWERYIALQARERERYLAERAAIPADAL
Ga0134063_102806562	3300010335	Grasslands Soil	MARQQITLNDPSRFKDPANLTWERYVALQARERERYLADRAAI
Ga0126370_100057759	3300010358	Tropical Forest Soil	MARKRLVLKNTALFVDPANLNWERYVTMQARERERYLAERATIPD
Ga0126370_123240561	3300010358	Tropical Forest Soil	MARERLTLRDTSRFKDPAGLTWERYVALQARERERYLAERAALPAEALAFRTVSPHYLDR
Ga0126376_107349211	3300010359	Tropical Forest Soil	MARKPLVLKNTALFVDPANLSWERYVTMQARERERYLAERATISDDALN
Ga0126378_112542342	3300010361	Tropical Forest Soil	MLERLILRDPALFKDPANLSWERYVALQARERERYQAARAALPADA
Ga0126379_106061381	3300010366	Tropical Forest Soil	MARKRLVLKNTLLFVDPANLSWERYVTMQARERER
Ga0126381_1038369352	3300010376	Tropical Forest Soil	MARTITLKTPERFKDPANLTWERYVALQARERERYLAERATIPAEAMAYKTVSPRYLERA
Ga0126383_107883811	3300010398	Tropical Forest Soil	MARKRLVLKDPGRFSDPANLSWERYIALQARERERYLAERATISPEALSYRT
Ga0134127_108535502	3300010399	Terrestrial Soil	MARKRLVLKNTGLFSDPANLSWERYVSMQARERERYLAER
Ga0137392_115542072	3300011269	Vadose Zone Soil	MATERLTLKDPSRFKDPAGLTWERYIALQARERERYLA
Ga0137393_106358392	3300011271	Vadose Zone Soil	MARRQITLRDPSRFKDPAGLTWERYIALQARERERYLAERALIP
Ga0137389_106215911	3300012096	Vadose Zone Soil	MPRLRIVLRDPSRFRDPANLTWERYIALQTRERERYLAERATIPQGAL
Ga0137380_100105469	3300012206	Vadose Zone Soil	MAHAPIVLNDPGRFKDPANLTWERYIALQTRERERYLAERATIPQDALDF
Ga0137381_114715522	3300012207	Vadose Zone Soil	MARKRLILKNTGLFSDPANLSWERYVSMQARERERYL
Ga0137369_100731431	3300012355	Vadose Zone Soil	MARKRLVLKDPGRFSDPAGLTWERYIAMQARERERDMAERAAISQDV
Ga0137390_119641152	3300012363	Vadose Zone Soil	MARVRISLREPGRFKDPANLNWERYIALQARERERYL
Ga0137358_103231581	3300012582	Vadose Zone Soil	MARQRLVLKNTALFSDPANLSWERYVIMQARERERYLAERATIPADALNYKNVS
Ga0157283_103527541	3300012907	Soil	MAPERITLKDPTRFRDPATLTWERYIALQARERERYLAERAAIPPEALAYRTVSPRY
Ga0137395_100258671	3300012917	Vadose Zone Soil	MARVRISLREPGRFKDPANLNWERYIALQARERERYLADR
Ga0137396_111621621	3300012918	Vadose Zone Soil	MARTITLKHPERFKDPANLTWERYVALQARERERYLAERATI
Ga0137394_104222091	3300012922	Vadose Zone Soil	MARRRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISP
Ga0137419_101992463	3300012925	Vadose Zone Soil	MARQRLVLKDPGRFSDPANLTWERYVALQARERERYLA
Ga0137404_100619554	3300012929	Vadose Zone Soil	MARRRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEA
Ga0126375_107915122	3300012948	Tropical Forest Soil	MPRYRIALRDPSRFRDPANLTWERYIVLQARERERYLAERD
Ga0126369_125061411	3300012971	Tropical Forest Soil	MADKRLVLRDPARFKDPANLTWERYVALQARERERYHVERATLPAEALTF
Ga0134076_105876211	3300012976	Grasslands Soil	MQITLNDLSRFKDPANLTWERYVALQARERERYLAERAAIPAEAMAYQT
Ga0134075_104406032	3300014154	Grasslands Soil	MARKRITLENPALFSDPANLTWERYVALQARERERYLAERATIPQDALDYKDVSPRYLEN
Ga0075314_10751642	3300014265	Natural And Restored Wetlands	MARPRIVLRDPNRFKDPANLSWERYVALQARERERYLAERATLPEDALAYRTVS
Ga0137418_101445541	3300015241	Vadose Zone Soil	MARQRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEALSYRTVS
Ga0134089_100242031	3300015358	Grasslands Soil	MARTITLKNPERFKDPASLTWERYVALQARERERYLAERASIPADAL
Ga0132255_1023114302	3300015374	Arabidopsis Rhizosphere	MPRQEIRLRDPSRFKDPANLSWERYVALQARERERYLADRAAIP
Ga0182039_108904131	3300016422	Soil	MARKRLVLKNTALFVDPANLSWERYVTMQARERERY
Ga0134112_104492832	3300017656	Grasslands Soil	MARRRLVLKNTALFSDPANLSWERYVVMQARERERYLAER
Ga0134074_12923891	3300017657	Grasslands Soil	VARKRLVLKDPGRFSDPAGLTWERYVAMQARERERYMAERAAISQDALNYKTVSQQY
Ga0187788_100278494	3300018032	Tropical Peatland	MVTRITLRDPGRFRDPAGLAWERYIALQARERERYLAERAAI
Ga0184640_104244621	3300018074	Groundwater Sediment	MARTRIVLKDPDRFKDPANLTWERYIALQARERERYLAERAAIPDDALAYRTVSPRYL
Ga0187774_100736353	3300018089	Tropical Peatland	MARRRVVLKDPSRFRDPANLTWERYIALQARERARYLAERDGLPPGALD
Ga0066667_104845512	3300018433	Grasslands Soil	MTRKQISLKDPGRFKDPANLTWERYVALQARERERYLAERATIPAEAMAY
Ga0066667_106523492	3300018433	Grasslands Soil	MARTITLKNPERFKDPANLMWERYVALQARERERYLAERASIPADARAYRTV
Ga0066667_123323882	3300018433	Grasslands Soil	MARKRLVLKNTALFNDPANLSWERYVVMQSRERERYLADRAN
Ga0173482_105402991	3300019361	Soil	MARKRLVLRNTGLFSDPANLSWERYVSMQARERERYLAERASIPD
Ga0187892_103333701	3300019458	Bio-Ooze	MARRKLVLKDLTRFRDPANLTWERYIALQARERERYLAERDALPPEALDFSGVKPGYLP
Ga0210403_101995151	3300020580	Soil	MARARITLRRPERFKDPANLTWERYIALQARERERYLAERAAIPADALAYRTVGPRYPER
Ga0210382_105121521	3300021080	Groundwater Sediment	MASPGVVLRDPDRFRDPANLSWERYIALQARERERH
Ga0126371_115826562	3300021560	Tropical Forest Soil	MADKRLVLRDPALFKDPANLTWERYVALQARERERYHV
Ga0210115_10787662	3300025791	Natural And Restored Wetlands	MARPRIVLRDPNRFKDPANLSWERYVALQARERERYLAER
Ga0207654_101838252	3300025911	Corn Rhizosphere	MAPERITLKDPARFRDPANLTWERYIELQARERERYLAERAAIPAEALAYKTV
Ga0207646_110017541	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARERLTLRDTSRFKDPAGLTWERYVALQARERERYLAERAALPAEALAFRTVSPRYL
Ga0207706_113382172	3300025933	Corn Rhizosphere	MARKRLVLKDPGRFSDPANLTWERYVALQARERER
Ga0208002_10215671	3300026029	Natural And Restored Wetlands	MARPRIVLRDPNRFKDPANLSWERYVALQARERERYLAERATLPEN
Ga0207708_114997341	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAPERITLKDPARFRDPANLTWERYIALQARERERYLAER
Ga0209470_11450581	3300026324	Soil	MARQRLVLKDPGRFSDPANLTWERYVALQARERERY
Ga0209470_11707191	3300026324	Soil	MARKRLVLKNTALFSDPANLSWERYVVMQARERERYLAERATIPDDALNYKTV
Ga0257164_10696602	3300026497	Soil	MARKRLVLKDPGRFSDPAGLTWERYVAMQARERERYM
Ga0209690_12263721	3300026524	Soil	MRIELKDPSRFKDPANLTWERYITMQARERERYLAEKATIPDDVLNFKHVSPRYLTNA
Ga0209156_104316532	3300026547	Soil	MARTITLKHPERFKDPANLTWERYVALQARERERYLAERATIPAD
Ga0209886_10225871	3300027273	Groundwater Sand	MARKKITLKDPSRFVDPANLTWERYVAMQARERERYLAERAAIPEDTLNYKNVS
Ga0209076_11466902	3300027643	Vadose Zone Soil	MARTITLTHPERFKDPANLTWERYVALQARERERYLAERATIPADALAYKTVSPR
Ga0209799_11038981	3300027654	Tropical Forest Soil	MARTITLKHPERFKDPANLSWERYVALQARERERY
Ga0209388_10779241	3300027655	Vadose Zone Soil	MARRRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEALSYRT
Ga0209814_100206741	3300027873	Populus Rhizosphere	MARTITLKTPERFKDPANLTWERYVALQARERERYLAERATIPAEAMAYKTVSPRY
Ga0209814_105178182	3300027873	Populus Rhizosphere	MGRTPIVLNDPSRFKDPANLSWERYVALQARERERYLAERAALPADALAYK
Ga0209465_106372762	3300027874	Tropical Forest Soil	MARKRLVLKDPGRFSDPANLTWERYVALQARERERYLAERATISPEALSYRTVSPQYL
Ga0209283_101909463	3300027875	Vadose Zone Soil	MARKRLVLKDPGRFSDPAGLTWERYVAMQARERERYMAER
Ga0209488_101232743	3300027903	Vadose Zone Soil	MARKHIVLKNTGLFSDPANLTWERYVAMQARERERYMAERAAISQDALNFKTVSP
Ga0209382_101251911	3300027909	Populus Rhizosphere	MARTQIVLNDPSRFKDPANLSWDRYVALQARERERYQAERAALPPAALTYE
Ga0209382_112397261	3300027909	Populus Rhizosphere	MAQQRIVLKDPDRFKDPANLSWERYVALQARERERYLAERAALPPEALTYATVSPR
Ga0209889_10709021	3300027952	Groundwater Sand	MARKPITLKDPGRFKDPANLTWERYVALQARERERYLAERATIPADALAYKTV
Ga0137415_106223781	3300028536	Vadose Zone Soil	MARTITLKDPGRFKDPANLTWERYVALQARERERYLAERTAIPEDALNYRTVSPRYL
Ga0268245_103174682	3300030505	Agave	MPRPRINLKDPSRFKDPANLSWERYVALQARERERYLTERAALPDDALSY
Ga0307469_105039641	3300031720	Hardwood Forest Soil	MARRRLVLKDPGRFSDPANLSWERYVALQARERERYLAERATISPEALGYRTV
Ga0307469_112407201	3300031720	Hardwood Forest Soil	MAPERITLKDPARFRDPANLTWERYIALQARERERYLAERAAIPPEALAYKTVGP
Ga0307468_1004159342	3300031740	Hardwood Forest Soil	MARKRLVLKNTALFSDPANLSWERYVVMQARERERYLAE
Ga0318535_101377181	3300031764	Soil	MARKRLVLENPALFVDPANLSWERYVTVQARERERYLAEK
Ga0318566_101062881	3300031779	Soil	MARKRLVLENPALFVDPANLSWERYVTVQARERERYLAEKATISDDTLNYRHVSPRYLE
Ga0318565_100209653	3300031799	Soil	MARKRLVLKNTALFVDPANLSWERYVTMQARERER
Ga0318564_102867091	3300031831	Soil	MARKRLVLENPALFVDPANLSWERYVTVQARERERYLAEKAT
Ga0306919_100729403	3300031879	Soil	MARKRLVLKNTALFVDPANLSWERYVTMQARERERYL
Ga0307407_116437262	3300031903	Rhizosphere	MARTPIVLKDPSRFKDPANLSWERYIALQARERERY
Ga0318507_104626981	3300032025	Soil	MARKRLVLENPALFVDPANLSWERYVTVQARERERYLAEKATISDDTLNYRHVSPR
Ga0318553_102913511	3300032068	Soil	MARKRLVLKNKALFVDPANLSWERYVTMQARERERYLAERATISDDALNYRS
Ga0307415_1022956652	3300032126	Rhizosphere	MARARVTLNDPSRFKDPANLSWERYVGLQARERERYLAERATIP
Ga0307471_1001753943	3300032180	Hardwood Forest Soil	MAHAPIVLRDPGRFKDPANLTWERYIALQTRERERYLAERATIPQ
Ga0307472_1000937803	3300032205	Hardwood Forest Soil	MARKRLVLKNTALFSDPANLSWERYVTMQARERERYLAERAAIPDDALNYRSVSPRY
Ga0307472_1007272521	3300032205	Hardwood Forest Soil	MARKRLVLKDPGRFSDPANLTWERYVALQARERERY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences