Metagenome Family F046234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046234
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	68 residues
Representative Sequence	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKRS
Number of Associated Samples	74
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.54 %
% of genes near scaffold ends (potentially truncated)	29.14 %
% of genes from short scaffolds (< 2000 bps)	80.79 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.980 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (33.775 % of family members)
Environment Ontology (ENVO)	Unclassified (54.305 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.834 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.62% β-sheet: 0.00% Coil/Unstructured: 56.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF04191	PEMT	6.62
PF04993	TfoX_N	2.65
PF08240	ADH_N	2.65
PF07045	DUF1330	1.99
PF13924	Lipocalin_5	1.32
PF08241	Methyltransf_11	1.32
PF08669	GCV_T_C	1.32
PF01042	Ribonuc_L-PSP	1.32
PF00196	GerE	1.32
PF13460	NAD_binding_10	0.66
PF07885	Ion_trans_2	0.66
PF04828	GFA	0.66
PF02517	Rce1-like	0.66
PF14534	DUF4440	0.66
PF07702	UTRA	0.66
PF13751	DDE_Tnp_1_6	0.66
PF12681	Glyoxalase_2	0.66
PF13683	rve_3	0.66
PF13230	GATase_4	0.66
PF04519	Bactofilin	0.66
PF10997	Amj	0.66
PF10009	DUF2252	0.66
PF13231	PMT_2	0.66
PF01797	Y1_Tnp	0.66
PF00005	ABC_tran	0.66
PF03992	ABM	0.66
PF01566	Nramp	0.66
PF12728	HTH_17	0.66
PF09180	ProRS-C_1	0.66
PF13701	DDE_Tnp_1_4	0.66
PF01243	Putative_PNPOx	0.66
PF01738	DLH	0.66
PF14237	GYF_2	0.66
PF04029	2-ph_phosp	0.66
PF00400	WD40	0.66
PF04392	ABC_sub_bind	0.66
PF05708	Peptidase_C92	0.66
PF02585	PIG-L	0.66
PF03401	TctC	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	2.65
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.99
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.32
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	1.32
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.66
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.66
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.66
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.66
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.66
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.66
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.98 %
Unclassified	root	N/A	47.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.98 %
Unclassified	root	N/A	47.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.98 %
Unclassified	root	N/A	47.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.72 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.11 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.99 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.97 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.99 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.97 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.97 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.65 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.99 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	4.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.65 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.99 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.65 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.99 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.32 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.66 %
Bradyrhizobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium denitrificans	0.66 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.65 %
Vitiosangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium	1.99 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.32 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.66 %
Bradyrhizobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium denitrificans	0.66 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.65 %
unclassified Vitiosangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium → unclassified Vitiosangium	1.99 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.32 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.66 %
Bradyrhizobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium denitrificans	0.66 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.02 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.65 %
Vitiosangium sp. GDMCC 1.1324	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium → unclassified Vitiosangium → Vitiosangium sp. GDMCC 1.1324	1.99 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.32 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.66 %
Bradyrhizobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium denitrificans	0.66 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_12735521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	600	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100595358	Not Available	1145	Open in IMG/M
3300000956\|JGI10216J12902_107376082	All Organisms → cellular organisms → Bacteria	5255	Open in IMG/M
3300004114\|Ga0062593_102067075	Not Available	634	Open in IMG/M
3300004633\|Ga0066395_10551888	Not Available	670	Open in IMG/M
3300005093\|Ga0062594_100201414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1389	Open in IMG/M
3300005332\|Ga0066388_100252650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2402	Open in IMG/M
3300005332\|Ga0066388_100287014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2289	Open in IMG/M
3300005332\|Ga0066388_100663217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1656	Open in IMG/M
3300005332\|Ga0066388_100750493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	1576	Open in IMG/M
3300005332\|Ga0066388_101122161	Not Available	1334	Open in IMG/M
3300005332\|Ga0066388_101528458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300005332\|Ga0066388_101688372	Not Available	1120	Open in IMG/M
3300005332\|Ga0066388_101807900	Not Available	1087	Open in IMG/M
3300005332\|Ga0066388_102730507	Not Available	901	Open in IMG/M
3300005332\|Ga0066388_102759732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300005332\|Ga0066388_103705577	Not Available	780	Open in IMG/M
3300005332\|Ga0066388_104794905	Not Available	688	Open in IMG/M
3300005332\|Ga0066388_106041116	Not Available	612	Open in IMG/M
3300005332\|Ga0066388_106464858	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_107308999	Not Available	555	Open in IMG/M
3300005334\|Ga0068869_100595567	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300005457\|Ga0070662_100446976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1072	Open in IMG/M
3300005713\|Ga0066905_100000377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11889	Open in IMG/M
3300005713\|Ga0066905_100684830	Not Available	878	Open in IMG/M
3300005713\|Ga0066905_100743791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	845	Open in IMG/M
3300005713\|Ga0066905_100962815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	750	Open in IMG/M
3300005764\|Ga0066903_100051559	All Organisms → cellular organisms → Bacteria	5019	Open in IMG/M
3300005764\|Ga0066903_100165180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3221	Open in IMG/M
3300005764\|Ga0066903_100170329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3183	Open in IMG/M
3300005764\|Ga0066903_100219903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2877	Open in IMG/M
3300005764\|Ga0066903_100462242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	2128	Open in IMG/M
3300005764\|Ga0066903_100873539	Not Available	1622	Open in IMG/M
3300005764\|Ga0066903_101674988	Not Available	1210	Open in IMG/M
3300005764\|Ga0066903_102771037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300005764\|Ga0066903_102997728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300005764\|Ga0066903_103249309	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300005764\|Ga0066903_104243932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300005937\|Ga0081455_10000052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	123035	Open in IMG/M
3300006844\|Ga0075428_100026153	All Organisms → cellular organisms → Bacteria	6463	Open in IMG/M
3300006844\|Ga0075428_100065361	All Organisms → cellular organisms → Bacteria	3983	Open in IMG/M
3300006844\|Ga0075428_100096781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3217	Open in IMG/M
3300006844\|Ga0075428_100373910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1528	Open in IMG/M
3300006854\|Ga0075425_100690054	Not Available	1173	Open in IMG/M
3300006969\|Ga0075419_10743597	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300009011\|Ga0105251_10193307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	917	Open in IMG/M
3300009094\|Ga0111539_12132983	Not Available	650	Open in IMG/M
3300009156\|Ga0111538_12840273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300009792\|Ga0126374_10271458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1120	Open in IMG/M
3300009792\|Ga0126374_10574448	Not Available	827	Open in IMG/M
3300009792\|Ga0126374_11813739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium → unclassified Vitiosangium → Vitiosangium sp. GDMCC 1.1324	510	Open in IMG/M
3300009811\|Ga0105084_1122859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300010043\|Ga0126380_10041747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2412	Open in IMG/M
3300010046\|Ga0126384_10091755	All Organisms → cellular organisms → Bacteria → Proteobacteria	2217	Open in IMG/M
3300010046\|Ga0126384_10162138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1733	Open in IMG/M
3300010046\|Ga0126384_10286741	Not Available	1348	Open in IMG/M
3300010046\|Ga0126384_10532375	Not Available	1018	Open in IMG/M
3300010046\|Ga0126384_10808167	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300010046\|Ga0126384_11410624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300010046\|Ga0126384_11737101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300010046\|Ga0126384_11781427	Not Available	584	Open in IMG/M
3300010046\|Ga0126384_11852028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	574	Open in IMG/M
3300010047\|Ga0126382_10016373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3735	Open in IMG/M
3300010047\|Ga0126382_11569817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	609	Open in IMG/M
3300010047\|Ga0126382_11984043	Not Available	553	Open in IMG/M
3300010358\|Ga0126370_10664038	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300010358\|Ga0126370_11337914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300010358\|Ga0126370_11762641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300010359\|Ga0126376_10080862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2414	Open in IMG/M
3300010359\|Ga0126376_11815751	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300010360\|Ga0126372_10563268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium → unclassified Vitiosangium → Vitiosangium sp. GDMCC 1.1324	1085	Open in IMG/M
3300010360\|Ga0126372_11010834	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300010360\|Ga0126372_12177560	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_12908094	Not Available	531	Open in IMG/M
3300010360\|Ga0126372_13008932	Not Available	523	Open in IMG/M
3300010361\|Ga0126378_11919980	Not Available	674	Open in IMG/M
3300010361\|Ga0126378_12535433	Not Available	586	Open in IMG/M
3300010362\|Ga0126377_10616521	Not Available	1131	Open in IMG/M
3300010362\|Ga0126377_12031915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	651	Open in IMG/M
3300010362\|Ga0126377_12841906	Not Available	558	Open in IMG/M
3300010362\|Ga0126377_13398152	Not Available	515	Open in IMG/M
3300010366\|Ga0126379_10750671	Not Available	1072	Open in IMG/M
3300010366\|Ga0126379_13556199	Not Available	522	Open in IMG/M
3300010376\|Ga0126381_100840037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300010376\|Ga0126381_101670647	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300010398\|Ga0126383_10056237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3307	Open in IMG/M
3300010398\|Ga0126383_10189684	Not Available	1962	Open in IMG/M
3300010398\|Ga0126383_10398326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300010398\|Ga0126383_10463305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1319	Open in IMG/M
3300010398\|Ga0126383_11920397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300010398\|Ga0126383_12745452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Vitiosangium → unclassified Vitiosangium → Vitiosangium sp. GDMCC 1.1324	575	Open in IMG/M
3300010401\|Ga0134121_10413080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1223	Open in IMG/M
3300012349\|Ga0137387_10307786	Not Available	1146	Open in IMG/M
3300012948\|Ga0126375_10019268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3141	Open in IMG/M
3300012948\|Ga0126375_10075116	All Organisms → cellular organisms → Bacteria → Proteobacteria	1912	Open in IMG/M
3300012948\|Ga0126375_10856077	Not Available	726	Open in IMG/M
3300012948\|Ga0126375_11250039	Not Available	621	Open in IMG/M
3300012961\|Ga0164302_10280489	Not Available	1076	Open in IMG/M
3300012971\|Ga0126369_10950518	Not Available	946	Open in IMG/M
3300012971\|Ga0126369_12937994	Not Available	558	Open in IMG/M
3300012971\|Ga0126369_13091881	Not Available	545	Open in IMG/M
3300012971\|Ga0126369_13242092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300014326\|Ga0157380_12825991	Not Available	552	Open in IMG/M
3300015195\|Ga0167658_1013609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2413	Open in IMG/M
3300015195\|Ga0167658_1017798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2029	Open in IMG/M
3300015371\|Ga0132258_10010993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18875	Open in IMG/M
3300016294\|Ga0182041_12207701	Not Available	514	Open in IMG/M
3300016341\|Ga0182035_10494258	Not Available	1044	Open in IMG/M
3300016357\|Ga0182032_10863330	Not Available	768	Open in IMG/M
3300016371\|Ga0182034_10664249	Not Available	884	Open in IMG/M
3300016387\|Ga0182040_11296918	Not Available	615	Open in IMG/M
3300016422\|Ga0182039_10055321	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300016422\|Ga0182039_10371216	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300016422\|Ga0182039_11724964	Not Available	573	Open in IMG/M
3300016422\|Ga0182039_12040792	Not Available	528	Open in IMG/M
3300018053\|Ga0184626_10220437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	800	Open in IMG/M
3300018078\|Ga0184612_10171540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1131	Open in IMG/M
3300019884\|Ga0193741_1067478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300020020\|Ga0193738_1038237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium denitrificans	1474	Open in IMG/M
3300021476\|Ga0187846_10141653	Not Available	1020	Open in IMG/M
3300021560\|Ga0126371_13259617	Not Available	549	Open in IMG/M
3300025885\|Ga0207653_10015463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2394	Open in IMG/M
3300026035\|Ga0207703_10146045	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2057	Open in IMG/M
3300027056\|Ga0209879_1061090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300027880\|Ga0209481_10050580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1925	Open in IMG/M
3300027907\|Ga0207428_10182522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1585	Open in IMG/M
3300027909\|Ga0209382_10009995	All Organisms → cellular organisms → Bacteria	11865	Open in IMG/M
3300027909\|Ga0209382_10096831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3461	Open in IMG/M
3300028792\|Ga0307504_10199883	Not Available	708	Open in IMG/M
3300031573\|Ga0310915_10604594	Not Available	777	Open in IMG/M
3300031573\|Ga0310915_10721303	Not Available	703	Open in IMG/M
3300031576\|Ga0247727_10063117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4303	Open in IMG/M
3300031576\|Ga0247727_10282844	Not Available	1424	Open in IMG/M
3300031719\|Ga0306917_11463158	Not Available	526	Open in IMG/M
3300031744\|Ga0306918_10220030	Not Available	1439	Open in IMG/M
3300031845\|Ga0318511_10573780	Not Available	525	Open in IMG/M
3300031879\|Ga0306919_10517843	Not Available	920	Open in IMG/M
3300031890\|Ga0306925_10386190	Not Available	1502	Open in IMG/M
3300031910\|Ga0306923_11862828	Not Available	615	Open in IMG/M
3300031910\|Ga0306923_12112859	Not Available	568	Open in IMG/M
3300031910\|Ga0306923_12148590	Not Available	562	Open in IMG/M
3300031912\|Ga0306921_11050372	Not Available	916	Open in IMG/M
3300031942\|Ga0310916_11469566	Not Available	556	Open in IMG/M
3300031943\|Ga0310885_10448526	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031954\|Ga0306926_11675196	Not Available	727	Open in IMG/M
3300031954\|Ga0306926_11736385	Not Available	711	Open in IMG/M
3300032001\|Ga0306922_10165887	Not Available	2366	Open in IMG/M
3300032076\|Ga0306924_11374717	Not Available	755	Open in IMG/M
3300032076\|Ga0306924_11437238	Not Available	734	Open in IMG/M
3300032261\|Ga0306920_100475605	Not Available	1855	Open in IMG/M
3300034819\|Ga0373958_0140585	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.76%
Host-Associated	Host-Associated	13.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.43%
Plants	Host-Associated → Plants	13.25%
Aquatic	Environmental → Aquatic	1.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Cave	Environmental → Terrestrial → Cave	1.99%
Sediment	Environmental → Aquatic → Sediment	1.32%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.93%
Loam	Environmental → Terrestrial → Soil → Loam	21.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.27%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Sand	Environmental → Terrestrial → Soil → Sand	1.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.99%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.32%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	33.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.32%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_127355212	3300000363	Soil	MLRKRKERKRKSIALTLIRDLKGTAAQKLAMFEKVRAAGGFANEDPADLAQADSMLREFAAMEKKE*
INPhiseqgaiiFebDRAFT_1005953582	3300000364	Soil	MLRKRKEPKHKSIALTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELGEAEKMLRAFAAMEKQGR*
JGI10216J12902_1073760828	3300000956	Soil	VRVLRELRFAVREVALLRKRKEPKKKSIALSLMRDVQGSAAQKLAMFQKVRAAGGFAKEDPADLEEAERMLREFAATEKNGS*
Ga0062593_1020670751	3300004114	Soil	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATEDMLRTFAAAERDRR*
Ga0066395_105518883	3300004633	Tropical Forest Soil	KRKEPKRKSIALSLMRDVQGPAAEKLRMCERVRASGGFANEHPADLAKAEKMLREFMAMEKGSG*
Ga0062594_1002014142	3300005093	Soil	LRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATEDMLRTFAAAERDRR*
Ga0066388_1002526502	3300005332	Tropical Forest Soil	MLGKRKEAKRKSIALSLMRDLQGSAAEKLRMFQKVRAAGGFANENPAELDEAEKMLRDFAAIEKGS*
Ga0066388_1002870143	3300005332	Tropical Forest Soil	MLRKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRASGGFANEDPADLAEADKMLREFAAMEKGS*
Ga0066388_1006632172	3300005332	Tropical Forest Soil	LQRKRKEPKRKSIALSLMRDVQGSAAEKLRMCERVRASGGFANEDPADLAKAEKMLREFVAMEKGSG*
Ga0066388_1007504933	3300005332	Tropical Forest Soil	KKSIALTLMRDVQGSAAEKLRMFERVRASGGFANEHPADLAQAEKMLRDFVAMEKSGG*
Ga0066388_1011221611	3300005332	Tropical Forest Soil	MAVLRKRKEPKRKSIALTLMRDVQGTAAQKLEMFEKVRAAGGFANEDPADLADAEKMLREFVAMEKARYRERGTGGA*
Ga0066388_1015284581	3300005332	Tropical Forest Soil	MLRKRKARKRKSIAMTLMRDLKGSAAQKLAMFAKIRAAGGFASEDPADLAEAERMLKEFAAMETEE*
Ga0066388_1016883721	3300005332	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDLHGTAAQKLAMFEKVRAAGGFANEHPTDLAKAEKMLREFAAMEKGSG*
Ga0066388_1018079004	3300005332	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDVQGSAAQKLEMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKGS*
Ga0066388_1027305072	3300005332	Tropical Forest Soil	EPKASIAMTLMRDVQGSAADKLRMFEKICVAGGFAKENPAELAEAEKMLRAFAATEKGTG
Ga0066388_1027597322	3300005332	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDLQGSAVEKLRMFEKMRGASGFAKEDPADLAGAERMLRAFVAMERKGGEA*
Ga0066388_1037055771	3300005332	Tropical Forest Soil	MLRKGKETKRKSIALSLMRDVQGSAAEKLRMFEKVRASGGFANEYPADLAEAEKKLREFVAMEKGS*
Ga0066388_1047949051	3300005332	Tropical Forest Soil	MLRTRKEPKRKSIAHTLMRDLQGSAAQKLAMFEKVRAAGGFANEHPADLAEAEKMLREFVAMEKGS*
Ga0066388_1060411161	3300005332	Tropical Forest Soil	MLRKKKERKPKSIALSFMRDVQGTATEKLRMFERVRAAGGFAKEDPAQLAEAERMLQAFAAMEKGSG*
Ga0066388_1064648582	3300005332	Tropical Forest Soil	MLRKREEPRGKNIARSLMRDVQGPASMKLAMFKRVRASGGFAKEDPAELAEAEEMLRAFAAMEKDSRKQ*
Ga0066388_1073089991	3300005332	Tropical Forest Soil	RKEPKRKSIAVTLMRDVQGTAAQKLAMFEKVRAAGGFANEDPAEAERMLREFVAMETREGSS*
Ga0068869_1005955672	3300005334	Miscanthus Rhizosphere	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFAYADPAEMKATEDMLRTFAAAERDRR*
Ga0070662_1004469763	3300005457	Corn Rhizosphere	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATED
Ga0066905_10000037712	3300005713	Tropical Forest Soil	MLRKRKARKRKSVAMTLMRDFKGSAAQKLAMFEKVRAAGGFASEDPADLAAAERMLREFAAMEKDE*
Ga0066905_1006848301	3300005713	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDVQGSAAQKLEMFEKVRAAGGFANEHPTDLAKAEKMLREFAAMEKGS*
Ga0066905_1007437912	3300005713	Tropical Forest Soil	MLRKKKEAKRKSIAPTLMRDLQGSAAQKLAMFKKVRAAGGFANEDPADLAAAEKMLPEFAAMEKGSG*
Ga0066905_1009628151	3300005713	Tropical Forest Soil	DTKGSVMLRKRKAPKRKSVALTLMRDLKGSAAQKLAMFEKVRAAGGFANEDPADLAQAERMLQEFAAMEKE*
Ga0066903_1000515596	3300005764	Tropical Forest Soil	LGTLSRDEGLQRKRKEPKRKSIALSLMRDVHSAAEKLRMFERVRASGGFANEDPADLAKAEKMLREFVAMEKGSG*
Ga0066903_1001651802	3300005764	Tropical Forest Soil	MLQKRKEPKRKSIALTLMRDLQGSAAEKLRMFEKVRAAGGFANERPADLAEAEKMLREFVAMEKGRE*
Ga0066903_1001703294	3300005764	Tropical Forest Soil	MLRKRKESKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANENPAELAEAEKMLREFAAMEKGS*
Ga0066903_1002199034	3300005764	Tropical Forest Soil	MLRKRKARKRKSIAMTLMRDLKGSAAQKLAMFEKIRAAGGFASEDPADLAEAERMLKEFAAMETEE*
Ga0066903_1004622422	3300005764	Tropical Forest Soil	LRKRKQPKRKSIAMTLMRDVQGSAAEKLRMFQKVRAAGGFAKEDPADLAEAEKMLREFVAMEKDGG*
Ga0066903_1008735394	3300005764	Tropical Forest Soil	MLRKRKEPKRKSIALQGSAAEKLRMFEKVRAAGGFAKESPADLAEAEKMLREFAAMEKGRGEE*
Ga0066903_1016749882	3300005764	Tropical Forest Soil	MLRKRKEPKRKSIAMTFMRDVQGSAAEKLRMFEKVRAAGGFANEHPTDLAEAEKMLREFAAMEKRS*
Ga0066903_1027710371	3300005764	Tropical Forest Soil	MLRKQTESKGKSIALSLMRDVQGSATEKLRMFEKVRAAGGFAKEDPVDLAEAERMLRDFVTMEKGNAGRR*
Ga0066903_1029977281	3300005764	Tropical Forest Soil	MSRKRKEPKRKSIALSLMRDVQGSAAEELRMFERVRDAGGFANEHPADLAEAEKML
Ga0066903_1032493091	3300005764	Tropical Forest Soil	LKDRLLVVEVAMLQKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFAAMEKGSLS*
Ga0066903_1042439321	3300005764	Tropical Forest Soil	SIALTLMRDLQGSAAEKLRMFEKVRAAGGFAKEDPAELAEAEKMLREFAAMEKGS*
Ga0081455_1000005232	3300005937	Tabebuia Heterophylla Rhizosphere	MLRKRKARKPKSVAMTLMRDLKGSAAQKLAMFEKVRAAGGFTNEDPADLAQAERMLQEFAAMEKKE*
Ga0075428_1000261537	3300006844	Populus Rhizosphere	MLRKRKEPKRKSIATTFMRDVQGSAAQKLAMFEKVRAAGGFAKEDPAELEEAEKMLRDCAAMEKGSG*
Ga0075428_1000653613	3300006844	Populus Rhizosphere	MLGKRKQPKRKSIAMTLMRDVQGSAAEKHVMFEKVRVAGGFANEHPGDLAEAEKLLREFAAMEKGA*
Ga0075428_1000967815	3300006844	Populus Rhizosphere	MLRKRKEPKRKSIGTTLMRDVQGSAAAKLAMFEKVRAAGGFAKENPADLAEAEKMLRESAAVEKGSG*
Ga0075428_1003739101	3300006844	Populus Rhizosphere	MFRKRKERKRKSIAETLMRDIQGSPAEKLAMFRKMKAAGGFANADPAELKAAEDMLRTFAATEGDRR*
Ga0075425_1006900544	3300006854	Populus Rhizosphere	MLRKRKEPKRKSIALSLMRDLQGSVAEELRTFEGARCWGFADEHPTDLTEAEKRLREFAAMEKGT*
Ga0075419_107435972	3300006969	Populus Rhizosphere	LRFGWREVAMLGKRKQPKRKSIAMTLMRDVQGSAAEKHVMFEKVRVAGGFANEHPGDLAEAEKLLREFAAMEKGA*
Ga0105251_101933072	3300009011	Switchgrass Rhizosphere	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATEDM
Ga0111539_121329833	3300009094	Populus Rhizosphere	DSATVPVAGCIAEEDGLMFRKRKERKRKSIAETLMRDIQGSPAEKLAMFRKMKAAGGFANADPAELKAAEDMLRTFAATEGDRR*
Ga0111538_128402732	3300009156	Populus Rhizosphere	MLPKRKEPKRKGIALTLIRDLQRTAAQKLAMFEKARAADGFAKVDPADRADVDRMLREFVAMDKGS*
Ga0126374_102714581	3300009792	Tropical Forest Soil	MLRKKKEPKAKKSIALTLMRDVQGSAAEKLRMFERVRASGGFANEHPADLAQVEKMLRDFVAMEKSGG
Ga0126374_105744483	3300009792	Tropical Forest Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAREHPADLAEAEKMLRSFAAMEKGSGKG*
Ga0126374_118137392	3300009792	Tropical Forest Soil	MDRLVVVEVAMLRKRKVPKRMSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFVAMEKGSLS*
Ga0105084_11228592	3300009811	Groundwater Sand	SIAMTLMRDVQGSAAQKLAMFEKVRAAGGFAKEDPAELEDAEKMLREFAAMERGSG*
Ga0126380_100417472	3300010043	Tropical Forest Soil	LELVEFSCCGEEVAMLRKGKETKRKSIALSLMRDVQGSAAEKLRMFEKVRASGGFANEYPADLAEAEKKLREFVAMEKGS*
Ga0126384_100917553	3300010046	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDLQGSAAEKLRMFEKVRAAGGFANERPADLVEAEKMLREFVAMEKGS*
Ga0126384_101621381	3300010046	Tropical Forest Soil	MLRKQTEPKGKSIALSLMRDVQGSATEKLRMFKKVRAAGGFAKADPADLAEAERMLRDFVTMEKGNAGRR*
Ga0126384_102867414	3300010046	Tropical Forest Soil	MLGKRKEAKRKSIALSLMRDLQGSAVEKLRMFQKVRAAGGFANENPAELDEAEKMLRDFAAIEKGS*
Ga0126384_105323751	3300010046	Tropical Forest Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFENVRAAGGFAREHPADLAEAEKMLRSFAAMEKGSGKG*
Ga0126384_108081673	3300010046	Tropical Forest Soil	MLPKRKESKAKKSIAMTLMRDVQGSAAQKLEMFQKVMAAGGFAKEHPADLEEAEKTLRAFAAAEKEIR*
Ga0126384_114106242	3300010046	Tropical Forest Soil	MLRKKKERKPKSIALSLMRDMQGTATEKLRMFERVRAAGGFAKEDPAQLAEAERMIQAFAAMEKGSG*
Ga0126384_117371011	3300010046	Tropical Forest Soil	LGLEEFSRRGEEGAMLRKKKEPKRKSIALTLMRDVQGSAAQKLEMFEKVRAAGGFANEHPTDLAKAEKMLREFAAMEKGS*
Ga0126384_117814271	3300010046	Tropical Forest Soil	LIEVAMLRKRKESKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANENPAELAEAEKMLREFARWRRGVE*
Ga0126384_118520282	3300010046	Tropical Forest Soil	KEPKRKSIALSLMRDVQGSAAEELRMFERVRDAGGFANEHPADLAEAEKMLRQFVAMERGSM*
Ga0126382_100163731	3300010047	Tropical Forest Soil	MLRKRKARKRKSVAMTLMRDFKGSAAQKLAMFEKVRAAGGFASEDPADLAAAERMLREFAAMEKKE*
Ga0126382_115698171	3300010047	Tropical Forest Soil	RKEPKRKSIALTLMRDVQGSAAEKLRMFEKVRDAGGFANEHPADLAEAEKMLRQFVAMERGSM*
Ga0126382_119840431	3300010047	Tropical Forest Soil	MLRKRKETKRKSIALTFMRDLQGSAAEKLRMFEKVRAVGGFANELPADLAKAEKMLRDFVALEKDSP*
Ga0126370_106640382	3300010358	Tropical Forest Soil	MDRLVVVEVAMLRKRKVPKRMSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFVAMEKGSVS*
Ga0126370_113379142	3300010358	Tropical Forest Soil	MLRKKKGRKPKSIALSLMRDVQGTATEKLRMFERVRAAGGFAKEDPAQLAEAFAAMEKGSG*
Ga0126370_117626411	3300010358	Tropical Forest Soil	LQRKRKEPKRKSIALSLMRDVQGSAAEELRMFERVRDAGGFANEHPADLAEAEKMLREFVAMDKGSSR*
Ga0126376_100808622	3300010359	Tropical Forest Soil	MLRKKKERKPKSIALSLMRDVQGTATEKLRMFERVRAAGGFAKEDPAQLAEAERMLQAFAAMEKGSG*
Ga0126376_118157511	3300010359	Tropical Forest Soil	MLPKRKEPKRKSIALILMRDLQGSAAEKLRMFEKVRAAGGFASEHPTDLAEAEKMLREFAAMEKRP*
Ga0126372_105632683	3300010360	Tropical Forest Soil	MSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFVAMEKGSVS*
Ga0126372_110108341	3300010360	Tropical Forest Soil	MLRKRKRPKRNSIAMSLMRDLQGSAAEKLRMFQKVRAAGGFAKEDPGDLAEAEKMLREFVAMERDGA*
Ga0126372_121775601	3300010360	Tropical Forest Soil	RDEGLQRKRKEPKRKSIALSLMRDVHSAAEKLRMFERVRASGGFANEDPADLAKAEKMLREFVAMEKGSG*
Ga0126372_129080941	3300010360	Tropical Forest Soil	MLRKQEKPKGMSIAMSIMRDVQGSASMKLAMFQRVRTSGGFAKEDPAELAEAEEMLRNFAAVEKDGRNR*
Ga0126372_130089322	3300010360	Tropical Forest Soil	MLQKRKEPKGKSIAMTLMRDLQGSAAEKLRMIEKVRAAGGFAKEDPADLAEAEKMLRAFAAMEEGSAEGR*
Ga0126378_119199802	3300010361	Tropical Forest Soil	LQRKRKEPKRKSIALSLMRDVQGSAAEKLRMCERVRASGGFANEHPADLAKAEKMLREFMAMEKGSG*
Ga0126378_125354331	3300010361	Tropical Forest Soil	MIYKEKFRFGLREAAVLRKRKEPKTKKSIALTLRRDLQGSAAEKLRMFEKVRAGGGFAKVDPAALAEAARMLREFVAMERGS*
Ga0126377_106165212	3300010362	Tropical Forest Soil	VELKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAGAEKMLRKFAAMEKGSG*
Ga0126377_120319151	3300010362	Tropical Forest Soil	MLRKRKAPKRKSVALTLMRDLKGSAAQKLAMFEKVRAAGGFANEDPADLAQAERMLQEFAAMEKE*
Ga0126377_128419061	3300010362	Tropical Forest Soil	MSRKQMEPKGKSIALSLMRDVQGPATEKLRMFEKVRAAGGFSKEDPADLAEAERMLRNFVTMEKGNAGRQAQ*
Ga0126377_133981522	3300010362	Tropical Forest Soil	MLRKKTVPKRKSIALTLMCDLQGSAAEKLRMFEKVRAAGGFANERPADLAEAEKMLREFVAMEKRS*
Ga0126379_107506712	3300010366	Tropical Forest Soil	MDTTVSTSKRNSIAMSLMRDLQGSAAEKLRMFQKVRAAGGFAKEDPADLAEAEKMLREFVAMERDGA*
Ga0126379_135561991	3300010366	Tropical Forest Soil	LELVEFSCCGEEVAMLRKGKETKRKSIALSLMRDVQGSAAEKLRMFEKVRASGGFANEHPADLAEAEKKLREFVAMEKGS*
Ga0126381_1008400371	3300010376	Tropical Forest Soil	MLPKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKL
Ga0126381_1016706471	3300010376	Tropical Forest Soil	MLRKKKERKRKSFALTLMRDVQGSAAEKLRMFEKVRDAGGFANEHPADLGEAEKKLREFVAMEKGSVS*
Ga0126383_100562371	3300010398	Tropical Forest Soil	MSRKQLEPKGKSIALSLMRDVQGSATEKLRMFKKVRAAGGFAKADPADLAEAERMLRDFVTMEKGNAGRR*
Ga0126383_101896843	3300010398	Tropical Forest Soil	MLRKRKEPKRKSIALTLMRDLQGSAAEKLRMFEKVRAAGGFAKESPADLAEAEKMLREFAAMEKGRGEE*
Ga0126383_103983263	3300010398	Tropical Forest Soil	MLRKRKQPKRNSIAMSLMRDLQGSAAEKLRMFEKVRAAGGFANERPADLVEAEKMLREFVAMEKGS*
Ga0126383_104633052	3300010398	Tropical Forest Soil	MLRKKKERKPKSIALSLMRDMQGTATEKLRMFERVRAAGGFAKEDPAQLAEAERMLQAFAAMEKGSG*
Ga0126383_119203971	3300010398	Tropical Forest Soil	MLRKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRDAGGLANEHPADLAEAEKMLRQFVAMERGSM*
Ga0126383_127454521	3300010398	Tropical Forest Soil	MLQKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFAAMEKGSLS*
Ga0134121_104130803	3300010401	Terrestrial Soil	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATEDMLRTFAAAERD
Ga0137387_103077861	3300012349	Vadose Zone Soil	GRLLLPVNWEVAVRVREVAMLGKQKEPKRKSIAMTLLRDMQGTAAQIAMFEKVRAAGGFAKEDPAEREEAGKMLRESAATEKGKG*
Ga0126375_100192682	3300012948	Tropical Forest Soil	MDRLVVVEVAMLRKRKEPKRMSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKKLREFVAMEKGSVS*
Ga0126375_100751161	3300012948	Tropical Forest Soil	MLRKRKETKRKSIALTFMRDLQGSAAEKLRMFEKVRAVGGFANELPADLAKAEKMLRDFMALEKDSP*
Ga0126375_108560773	3300012948	Tropical Forest Soil	MLRKRKEPKRKSIALALMRDVQGSAAEKLAMFDKVRAAGGFANEHPADLAEAEKMLREFAAMEKESG*
Ga0126375_112500391	3300012948	Tropical Forest Soil	MSRKQMEPKGKSIALSLMRDVQGPATEKLRMFEKVRAAGGFSKEDPADLAEAERMLRNFVTMEKGNAGRRAQ*
Ga0164302_102804891	3300012961	Soil	MLGKRKEPRRKSIAMTLMRDVQGTAAQKLEMFEKVRAAGGFAKERPADLEEAEKVRREVAAMEKGSE*
Ga0126369_109505181	3300012971	Tropical Forest Soil	EVVADIAKIQETGGETVVLPKRREPKASIAMTLMRDVQGSAADKLRMFEKICVAGGFAKENPAELAEAEKMLRAFAATEKGTG*
Ga0126369_129379942	3300012971	Tropical Forest Soil	MDTTVSTSKRNSIAMSLMRDLQGSAAEKLRMFQKVRAAGGFAKEDPADLAGAEKMLREFVAMERDGA*
Ga0126369_130918811	3300012971	Tropical Forest Soil	MLRKQTEPKGKSIALSLMRDVQGSATEKLRMFKKVRAAGGFAKEDPADLAEAERMLRDFVTMEKENAGRR*
Ga0126369_132420921	3300012971	Tropical Forest Soil	MLRKRKEPKRKSIALSLMRDVQGSAAEKLRMFEKVRAAGGFANELPADLAEAEKMLREFAAMEKGK*
Ga0157380_128259912	3300014326	Switchgrass Rhizosphere	VNPLSREIDMLQKRKEPKGKSIALTLMRDLQGSAAQKLAMFEKVRAAGGFAKEHPADLAEAEKMLREFAAME
Ga0167658_10136094	3300015195	Glacier Forefield Soil	MTLAEVAMLRKRKEPKRKSIAMSLMRDVQGAAAQKLAMFEKVRAAGGFANEDPAHLAEAERMPREFAAMEKETG*
Ga0167658_10177981	3300015195	Glacier Forefield Soil	MGSCAAETMREAAVLGKRKERKGKSIALTLMRDVQGTAASKLAMFEKVRAAGGFANEHAADLAEAEKMLREFAAMEKGTG*
Ga0132258_1001099321	3300015371	Arabidopsis Rhizosphere	MLRQRKARKRKSIALTLVRDLKGTAAQKLAMFEKVRAAGGFANEDPADLAQADSMLREFAAM
Ga0182041_122077012	3300016294	Soil	RSDVAEEEEPKRKIIAMTLMRDVQGSAAEKLRMFEKKARCRGFANAHAAGLARAEKMQRELEEVEKVWE
Ga0182035_104942583	3300016341	Soil	MLRKQKEPKRKSIALSLMRDVQGSATEKLRMFQKVRAAGGFAKEDPADLAEAERMLRGFAAMEKGNAGRR
Ga0182032_108633301	3300016357	Soil	LKEVVMLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKRS
Ga0182034_106642492	3300016371	Soil	VRKRKEPKRKSIAMTLMRDLQGSAAEKLRMFEKVRAAGGFAREDPADLAEAERMLRDFVTMEKENAGRR
Ga0182040_112969181	3300016387	Soil	MAPRRKERKRKGLAITLLRDIQGSPAEKLALFQKMKAAGGFANESETELKAAEELLQTLGSVEKMQDEEI
Ga0182039_100553212	3300016422	Soil	MLQKKKQPKPKSVALSLMRDLLGSAAEKLHMFEKVRAAGGFANEHPADLAKAEKMLRDFAAMEKKAIGEV
Ga0182039_103712163	3300016422	Soil	EPNAKKSIAMTLMREVQGSAAQKLEMFQKVMAAGGFAKEHPADLEEAEKTLRAFAAAEKENR
Ga0182039_117249641	3300016422	Soil	GANFIFGLAGLKEVVMLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKHS
Ga0182039_120407921	3300016422	Soil	MLPKRKVPKRKSIAKTLMRDIQGSAADKLVMFQKMRAAGGFANEDPAELAKAEEILRAFATMEKGRE
Ga0184626_102204372	3300018053	Groundwater Sediment	LRKRKEPKRKSVAEILMRDIQGSPAEKLALFQKVKDAGGFAKEDPKDLKEAEDMLRTFAAVEKEGG
Ga0184612_101715402	3300018078	Groundwater Sediment	DPPMLRKRKEPKRKRVAEILMRDIQGSPAEKLALFQKVKDAGGFAKEDPKDLKEAEDMLRTFAAVEKEGG
Ga0193741_10674782	3300019884	Soil	MLPKRKELKRKSIAMTLMRDVQGSAAEKLAMFEKVRGAGGFANEHPADLAEAERTLREFVAMERGSG
Ga0193738_10382373	3300020020	Soil	MLRKRKEPKRKSIATTFMRDVQGSAAQKLAMFEKVRAAGGFAKEDPAELEDAEKMLREFAAMERGSG
Ga0187846_101416532	3300021476	Biofilm	MLPKRKEPKAKKSIAMTLMRDVQGSAAQKLEMFQKVMAAGGFAKEHPADLEEAEKTLRAFAATEKENR
Ga0126371_132596172	3300021560	Tropical Forest Soil	RMDTTVSTSKRNSIAMSLMRDLQGSAAEKLRMFQKVRAAGGFAKEDPADLAEAEKMLREFVAMERDGA
Ga0207653_100154632	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MLRKRKERKRKSIAETLIEDIQGSPADKLAMFQKMKAAGGFANADPAELKATEDMLRTFAAAERDRR
Ga0207703_101460451	3300026035	Switchgrass Rhizosphere	MLQKRKEPKGKSIALTLMRDLQGSAAQKLAMFEKVRAAGGFASEHPADLAEAEKMLREFAAMEKRSG
Ga0209879_10610903	3300027056	Groundwater Sand	RRPCVESEVAMLRKRKEPKRKSIATTFMRDVQGSAAQKLAMFEKVRAAGGFAKEDPAELEDAEKMLREFAAMERGSG
Ga0209481_100505804	3300027880	Populus Rhizosphere	MLRKRKEPKRKSIATTFMRDVQGSAAQKLAMFEKVRAAGGFAKEDPAELEEAEKMLRDCAAMEKGSG
Ga0207428_101825222	3300027907	Populus Rhizosphere	MLRKRKERKRKSIALTLIRDLKGTAAQKLAMFEKVRAAGGFANEDPADLAQADSMLREFAAMEKKE
Ga0209382_100099953	3300027909	Populus Rhizosphere	MLGKRKQPKRKSIAMTLMRDVQGSAAEKHVMFEKVRVAGGFANEHPGDLAEAEKLLREFAAMEKGA
Ga0209382_100968313	3300027909	Populus Rhizosphere	MFRKRKERKRKSIAETLMRDIQGSPAEKLAMFRKMKAAGGFANADPAELKAAEDMLRTFAATEGDRR
Ga0307504_101998833	3300028792	Soil	RYDMLGKHKEPKRKSVAMTLVRDMQGSAAQKLAMFEKMRAAGGFAKEDLADLAEAEKMLRAFAAMEKEQR
Ga0310915_106045942	3300031573	Soil	MLRKQTEPKGKSIALSLMRDVQGSATEKLRMFEKVRAAGGFAREDPADLAEAERMLRDFVTMEKENAGRR
Ga0310915_107213031	3300031573	Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLRDFAAMEKYS
Ga0247727_100631176	3300031576	Biofilm	MLRKRKEPKRKSIAMTLMRDIQGSPAEKLAMFERMKAAGGFANEDPAELKAAEDMLRTFAATDGDRR
Ga0247727_102828444	3300031576	Biofilm	VAEPKPKRKERKRKSIAETLMRDIQGSPAEKLAMFQKMKAAGGFTNEDPAELKASEDMLRAFAATERESE
Ga0306917_114631582	3300031719	Soil	MLQKKKQPKPKSVALSLMRDLLGSAAEKLHMFEKVRAAGGFANEHPADLAKAEKMLREFVAMEKGS
Ga0306918_102200303	3300031744	Soil	MLGKPKEPKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAEAEKMLREFAAMERGS
Ga0318511_105737801	3300031845	Soil	LGKPKEPKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAEAEKMLREFAAME
Ga0306919_105178432	3300031879	Soil	MLRKRKEPKRKSIATTLMRDIQGTAAEKLAMFQKMRAAGGFASEDPAELAKAEDALRKFAVAGTSNDVADEVDI
Ga0306925_103861901	3300031890	Soil	LGKPKEPKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAEAEKMLREFAAMERGS
Ga0306923_118628283	3300031910	Soil	MLQKKKQPKPKSVALSLMRDLLGSAAEKLHMFEKVRAAGGFANEHPADLAKAEKMLREFVAME
Ga0306923_121128592	3300031910	Soil	MLGKQKEPKRKSIALSLMRDVQGSATEKLRMFQKVRAAGGFAKEDPADLAEAERMLRGFA
Ga0306923_121485901	3300031910	Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKHS
Ga0306921_110503722	3300031912	Soil	NFIFGTPGLKEVVMLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKRS
Ga0310916_114695661	3300031942	Soil	PKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAEAEKMLREFAAMERGS
Ga0310885_104485261	3300031943	Soil	MLWKRKEPKRKSIAMSLMRDVPGPAADKIAMFEKVRLAGGFENEDPVELNAAEDLLRTFAAAERG
Ga0306926_116751962	3300031954	Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFASMEKRS
Ga0306926_117363851	3300031954	Soil	MLRKQTEPKGKSIALSLMRDVQGSATEKLRMFQKVRAAGGFAKEDPADLAEAERMLRDFVTMEKENAGRR
Ga0306922_101658874	3300032001	Soil	QPKPKSVALSLMRDLLGSAAEKLHMFEKVRAAGGFANEHPADLAKAEKMLREFVAMEKGS
Ga0306924_113747171	3300032076	Soil	KEPKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFAKENPAELAEAEKMLREFAAMERG
Ga0306924_114372382	3300032076	Soil	MLRKRKEPKRKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLREFAAMEKRS
Ga0306920_1004756051	3300032261	Soil	SGFREVLMLRKRKKPKQKSIAMTLMRDVQGSAAEKLRMFEKVRAAGGFANEHPADLAEAEKMLRDFAAMEKYS
Ga0373958_0140585_93_293	3300034819	Rhizosphere Soil	MLRQRKARKRKSIALTLVRDLKGTAAQKLAMFEKVRAAGGFANEDPADLAQADSMLREFAAMEKKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences