Metagenome / Metatranscriptome Family F046125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	45 residues
Representative Sequence	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEAG
Number of Associated Samples	95
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.68 %
% of genes near scaffold ends (potentially truncated)	98.01 %
% of genes from short scaffolds (< 2000 bps)	91.39 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.589 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.656 % of family members)
Environment Ontology (ENVO)	Unclassified (70.199 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.656 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.39% β-sheet: 0.00% Coil/Unstructured: 67.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF01068	DNA_ligase_A_M	2.65
PF00162	PGK	2.65
PF00589	Phage_integrase	1.99
PF13384	HTH_23	1.32
PF04311	DUF459	0.66
PF13545	HTH_Crp_2	0.66
PF04392	ABC_sub_bind	0.66
PF05050	Methyltransf_21	0.66
PF05930	Phage_AlpA	0.66
PF00884	Sulfatase	0.66
PF07045	DUF1330	0.66
PF01527	HTH_Tnp_1	0.66
PF13358	DDE_3	0.66
PF07859	Abhydrolase_3	0.66
PF01255	Prenyltransf	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	2.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.65
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.66
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.66
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.66
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
All Organisms	root	All Organisms	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
cellular organisms	root	All Organisms → cellular organisms	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.97 %
Bradyrhizobium sp. 174	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	0.66 %
Bradyrhizobium sp. 188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 188	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10022295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1733	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10037638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300005332\|Ga0066388_102320293	Not Available	971	Open in IMG/M
3300005332\|Ga0066388_102399911	Not Available	956	Open in IMG/M
3300005332\|Ga0066388_104931563	Not Available	678	Open in IMG/M
3300005332\|Ga0066388_106223232	Not Available	602	Open in IMG/M
3300005332\|Ga0066388_106811788	Not Available	575	Open in IMG/M
3300005332\|Ga0066388_107761401	Not Available	537	Open in IMG/M
3300005363\|Ga0008090_15850571	Not Available	1151	Open in IMG/M
3300005713\|Ga0066905_102225993	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_100071123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4452	Open in IMG/M
3300005764\|Ga0066903_100102373	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300005764\|Ga0066903_103194601	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005764\|Ga0066903_104972530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	705	Open in IMG/M
3300005764\|Ga0066903_106612728	Not Available	603	Open in IMG/M
3300005764\|Ga0066903_107141066	Not Available	578	Open in IMG/M
3300005764\|Ga0066903_107322371	Not Available	570	Open in IMG/M
3300010047\|Ga0126382_10146717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1608	Open in IMG/M
3300010047\|Ga0126382_10843516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 174	786	Open in IMG/M
3300010358\|Ga0126370_10610460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	943	Open in IMG/M
3300010358\|Ga0126370_11256749	Not Available	691	Open in IMG/M
3300010359\|Ga0126376_11652826	Not Available	674	Open in IMG/M
3300010359\|Ga0126376_12477125	Not Available	566	Open in IMG/M
3300010360\|Ga0126372_12836552	Not Available	537	Open in IMG/M
3300010361\|Ga0126378_10374080	Not Available	1536	Open in IMG/M
3300010362\|Ga0126377_11488053	Not Available	751	Open in IMG/M
3300010362\|Ga0126377_13135017	Not Available	534	Open in IMG/M
3300010376\|Ga0126381_102304160	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300010376\|Ga0126381_105097581	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010398\|Ga0126383_10984843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 188	931	Open in IMG/M
3300010398\|Ga0126383_11726944	Not Available	715	Open in IMG/M
3300010398\|Ga0126383_12818302	Not Available	568	Open in IMG/M
3300010868\|Ga0124844_1135080	Not Available	938	Open in IMG/M
3300010868\|Ga0124844_1241712	Not Available	639	Open in IMG/M
3300012201\|Ga0137365_10280190	Not Available	1237	Open in IMG/M
3300012209\|Ga0137379_10955926	Not Available	761	Open in IMG/M
3300012354\|Ga0137366_10318686	Not Available	1142	Open in IMG/M
3300012362\|Ga0137361_10811386	Not Available	851	Open in IMG/M
3300012582\|Ga0137358_10770400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300012971\|Ga0126369_11440974	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300016270\|Ga0182036_10688814	Not Available	826	Open in IMG/M
3300016270\|Ga0182036_11259677	Not Available	616	Open in IMG/M
3300016294\|Ga0182041_11576011	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300016319\|Ga0182033_10213879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1542	Open in IMG/M
3300016341\|Ga0182035_11646040	Not Available	579	Open in IMG/M
3300016357\|Ga0182032_10526772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300016357\|Ga0182032_11154679	Not Available	665	Open in IMG/M
3300016371\|Ga0182034_11515330	Not Available	588	Open in IMG/M
3300016387\|Ga0182040_11356067	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300016404\|Ga0182037_10051423	Not Available	2754	Open in IMG/M
3300016404\|Ga0182037_10486959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300016422\|Ga0182039_10678401	Not Available	907	Open in IMG/M
3300016445\|Ga0182038_10040000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3041	Open in IMG/M
3300016445\|Ga0182038_12007422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021560\|Ga0126371_10529634	Not Available	1327	Open in IMG/M
3300021560\|Ga0126371_13144847	Not Available	558	Open in IMG/M
3300025922\|Ga0207646_10159577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2034	Open in IMG/M
3300027862\|Ga0209701_10397699	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300027874\|Ga0209465_10479617	Not Available	621	Open in IMG/M
3300031543\|Ga0318516_10585004	Not Available	638	Open in IMG/M
3300031544\|Ga0318534_10239526	Not Available	1047	Open in IMG/M
3300031545\|Ga0318541_10509666	Not Available	673	Open in IMG/M
3300031546\|Ga0318538_10038237	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300031546\|Ga0318538_10348877	Not Available	799	Open in IMG/M
3300031561\|Ga0318528_10740802	Not Available	526	Open in IMG/M
3300031564\|Ga0318573_10247220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	950	Open in IMG/M
3300031564\|Ga0318573_10284317	Not Available	884	Open in IMG/M
3300031573\|Ga0310915_10307552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300031640\|Ga0318555_10203904	Not Available	1066	Open in IMG/M
3300031640\|Ga0318555_10594465	Not Available	599	Open in IMG/M
3300031668\|Ga0318542_10118775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1291	Open in IMG/M
3300031679\|Ga0318561_10030328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2604	Open in IMG/M
3300031680\|Ga0318574_10045965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2279	Open in IMG/M
3300031681\|Ga0318572_10114282	Not Available	1536	Open in IMG/M
3300031681\|Ga0318572_10240547	Not Available	1063	Open in IMG/M
3300031682\|Ga0318560_10090063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300031713\|Ga0318496_10098745	Not Available	1565	Open in IMG/M
3300031713\|Ga0318496_10585882	Not Available	616	Open in IMG/M
3300031719\|Ga0306917_10058024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2634	Open in IMG/M
3300031719\|Ga0306917_10060010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2594	Open in IMG/M
3300031719\|Ga0306917_11402767	Not Available	539	Open in IMG/M
3300031723\|Ga0318493_10336620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300031736\|Ga0318501_10270960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300031736\|Ga0318501_10703732	Not Available	557	Open in IMG/M
3300031744\|Ga0306918_10646739	Not Available	828	Open in IMG/M
3300031744\|Ga0306918_11379789	Not Available	540	Open in IMG/M
3300031747\|Ga0318502_10069761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1893	Open in IMG/M
3300031763\|Ga0318537_10085993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300031763\|Ga0318537_10271329	Not Available	628	Open in IMG/M
3300031769\|Ga0318526_10475843	Not Available	510	Open in IMG/M
3300031781\|Ga0318547_10567173	Not Available	703	Open in IMG/M
3300031782\|Ga0318552_10233484	Not Available	933	Open in IMG/M
3300031795\|Ga0318557_10513767	Not Available	550	Open in IMG/M
3300031798\|Ga0318523_10183538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300031805\|Ga0318497_10163086	Not Available	1224	Open in IMG/M
3300031821\|Ga0318567_10512384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300031833\|Ga0310917_10832666	Not Available	622	Open in IMG/M
3300031833\|Ga0310917_11100230	Not Available	530	Open in IMG/M
3300031833\|Ga0310917_11127355	Not Available	523	Open in IMG/M
3300031835\|Ga0318517_10060933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1601	Open in IMG/M
3300031835\|Ga0318517_10196914	Not Available	907	Open in IMG/M
3300031845\|Ga0318511_10329016	Not Available	693	Open in IMG/M
3300031846\|Ga0318512_10040273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2047	Open in IMG/M
3300031846\|Ga0318512_10609173	Not Available	557	Open in IMG/M
3300031860\|Ga0318495_10477112	Not Available	545	Open in IMG/M
3300031880\|Ga0318544_10178914	Not Available	817	Open in IMG/M
3300031896\|Ga0318551_10486537	Not Available	707	Open in IMG/M
3300031910\|Ga0306923_11097384	Not Available	857	Open in IMG/M
3300031910\|Ga0306923_11115915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300031912\|Ga0306921_10452621	Not Available	1495	Open in IMG/M
3300031912\|Ga0306921_11203815	Not Available	843	Open in IMG/M
3300031912\|Ga0306921_11699612	Not Available	682	Open in IMG/M
3300031941\|Ga0310912_10859169	Not Available	699	Open in IMG/M
3300031941\|Ga0310912_11036017	Not Available	628	Open in IMG/M
3300031941\|Ga0310912_11171653	Not Available	585	Open in IMG/M
3300031942\|Ga0310916_10446688	Not Available	1101	Open in IMG/M
3300031942\|Ga0310916_10616488	Not Available	921	Open in IMG/M
3300031945\|Ga0310913_10220804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1327	Open in IMG/M
3300031945\|Ga0310913_10320359	Not Available	1095	Open in IMG/M
3300031945\|Ga0310913_10584091	Not Available	792	Open in IMG/M
3300031945\|Ga0310913_10862676	Not Available	637	Open in IMG/M
3300031946\|Ga0310910_10011561	All Organisms → cellular organisms → Bacteria	5536	Open in IMG/M
3300031946\|Ga0310910_10300658	Not Available	1262	Open in IMG/M
3300031946\|Ga0310910_10339416	Not Available	1186	Open in IMG/M
3300031946\|Ga0310910_10375923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1124	Open in IMG/M
3300031947\|Ga0310909_10308548	Not Available	1326	Open in IMG/M
3300031947\|Ga0310909_11494910	Not Available	538	Open in IMG/M
3300031954\|Ga0306926_10541252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1427	Open in IMG/M
3300032001\|Ga0306922_10496218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300032010\|Ga0318569_10425359	Not Available	619	Open in IMG/M
3300032025\|Ga0318507_10016370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2553	Open in IMG/M
3300032035\|Ga0310911_10313902	Not Available	903	Open in IMG/M
3300032041\|Ga0318549_10401053	Not Available	618	Open in IMG/M
3300032043\|Ga0318556_10244091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	937	Open in IMG/M
3300032044\|Ga0318558_10361646	Not Available	720	Open in IMG/M
3300032052\|Ga0318506_10467436	Not Available	559	Open in IMG/M
3300032059\|Ga0318533_10272516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300032059\|Ga0318533_10709186	Not Available	738	Open in IMG/M
3300032064\|Ga0318510_10328565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300032065\|Ga0318513_10275908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300032066\|Ga0318514_10083392	Not Available	1600	Open in IMG/M
3300032066\|Ga0318514_10601986	Not Available	585	Open in IMG/M
3300032068\|Ga0318553_10583438	Not Available	585	Open in IMG/M
3300032076\|Ga0306924_10600270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1245	Open in IMG/M
3300032091\|Ga0318577_10139649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1150	Open in IMG/M
3300032094\|Ga0318540_10116158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1267	Open in IMG/M
3300032261\|Ga0306920_100766519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1418	Open in IMG/M
3300033289\|Ga0310914_10316970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1407	Open in IMG/M
3300033289\|Ga0310914_10956391	Not Available	756	Open in IMG/M
3300033289\|Ga0310914_11339046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	618	Open in IMG/M
3300033289\|Ga0310914_11354139	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.08%
Loam	Environmental → Terrestrial → Soil → Loam	11.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.26%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100222955	3300000597	Forest Soil	MTNRRRSATPRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEAGAEDELKVISRQL
AF_2010_repII_A001DRAFT_100376382	3300000793	Forest Soil	MTNRRRSPTARSVPTQTPEQLLALSQEYIRPLIAMIDRLNEAGAEDELKV
Ga0066388_1023202932	3300005332	Tropical Forest Soil	MTKHRRSATTRLVSAETPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISK
Ga0066388_1023999113	3300005332	Tropical Forest Soil	MTKRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEAG
Ga0066388_1049315631	3300005332	Tropical Forest Soil	MTKHRHSATTRSVPAETPERLLELTQEHIRPLIPLIDRLNEAGAEDELRVI
Ga0066388_1062232322	3300005332	Tropical Forest Soil	MTNGRRSATTRSVPAQTPEQLLDVAQEHIRPLIGVIDQLNEADAED
Ga0066388_1068117881	3300005332	Tropical Forest Soil	MTKYRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEAG
Ga0066388_1077614011	3300005332	Tropical Forest Soil	MANRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNE
Ga0008090_158505711	3300005363	Tropical Rainforest Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGVIDRLNEANAEDELRVI
Ga0066905_1022259931	3300005713	Tropical Forest Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLID
Ga0066903_1000711237	3300005764	Tropical Forest Soil	MTNRRRSPTARSVPAQTPEQLLELSQEHIRPLIGMIDRLNEAGAEDEL
Ga0066903_1001023738	3300005764	Tropical Forest Soil	MTKGRRSATARSVPAQTPEQLLQLTQEHIRPLIAMIDRLPARSTS*
Ga0066903_1031946012	3300005764	Tropical Forest Soil	MTTRRRSAPARSVPAQTPEQLLELTQEHIRPLIGMIDRLN
Ga0066903_1049725301	3300005764	Tropical Forest Soil	MTNHRRSANTRSVPAQTSEQLLELTQEHIRPLIGLIDRLSEAG
Ga0066903_1066127281	3300005764	Tropical Forest Soil	MTNRRRSPTARSVPAQTPAQLLALSQEYIRPLIGMIDRLNEAGAEDELRVITK
Ga0066903_1071410662	3300005764	Tropical Forest Soil	MTNRRRSATTRSVPAQTPEQLLDVAQEHIRPLIGVIDQLNEADAEDEL
Ga0066903_1073223711	3300005764	Tropical Forest Soil	MTRHRRSAPTRSVPAETPDRLLELTQEHIRPLIGLIDRLNDAGAEDEL
Ga0126382_101467173	3300010047	Tropical Forest Soil	MTNRHRSATTRSVPAQTPEQLLGLAQEHIRPLIGVIDRLN
Ga0126382_108435161	3300010047	Tropical Forest Soil	MTIRHRSATTRSVPAQTPQQLLELAQEYIRPLIGVIDRLNEANAEDELRVIN*
Ga0126370_106104601	3300010358	Tropical Forest Soil	MSNRRRSATTRSVLAQTPEQLLELTQEHIRPLIGLIDRLSEAGAE
Ga0126370_112567491	3300010358	Tropical Forest Soil	MNNRRRSATTRSVPAESPERLLELTQEHIRPLIGLIDQLNEAGAEDELRV
Ga0126376_116528262	3300010359	Tropical Forest Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEAGAEGRAEGYQQTT
Ga0126376_124771251	3300010359	Tropical Forest Soil	MTKHRRSATTRLVSAETPERLLELTQEHIRPLIGLIDRLNEAGAEDEL
Ga0126372_128365521	3300010360	Tropical Forest Soil	MTKRRRSATTRSVPAESPDRLLELTQEHIRPLIGLIDRLNEAGAEDELKVISKQ
Ga0126378_103740802	3300010361	Tropical Forest Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEA
Ga0126377_114880533	3300010362	Tropical Forest Soil	MTKHRRSATTRSVSAETPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQ
Ga0126377_131350171	3300010362	Tropical Forest Soil	MTKHRRSATTRPVPAETPERLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQ
Ga0126381_1023041601	3300010376	Tropical Forest Soil	MTKRRRSATTRSVPPQTPEQLLELTQEHIRPLIGLIDQLNEAGAEDELRV
Ga0126381_1050975812	3300010376	Tropical Forest Soil	MTKRRRSATTRSVPAQTPEQLLELTQEHIRPLIGLIDQLNEAGAEDELRV
Ga0126383_109848431	3300010398	Tropical Forest Soil	MTIRHRSATTRSVPAQTPQQLLELAQEYIRPLIGVIDRLNEANAEDEL
Ga0126383_117269441	3300010398	Tropical Forest Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEAGAEDE
Ga0126383_128183021	3300010398	Tropical Forest Soil	TRSVPAQTPQQLLELAQEYIRPLIGVIDRLNEANAEDELRVIN*
Ga0124844_11350802	3300010868	Tropical Forest Soil	MTKRRRSATTPSVPAETPDRLLELTQEHIRPLIGLIDRLNEA
Ga0124844_12417121	3300010868	Tropical Forest Soil	MSNRRRSATTRSVPAQTPEQLLEVAQEHIRPLIGVID
Ga0137365_102801903	3300012201	Vadose Zone Soil	MTSRRRSATTRSVPAKTPEQLLELAQEHIRPLIDVIDRLNEADAEDELRVLS
Ga0137379_109559261	3300012209	Vadose Zone Soil	MTNRSRSATTRSVPAQTPEPLLELAQEHIRPLIGVIDRLNEAKAEDELRVIKQTTHAAVL
Ga0137366_103186861	3300012354	Vadose Zone Soil	MTSRRRSATTRSVPAKTPEQLLELAQEHIRPLIDVIDRLNEADAEDELRV
Ga0137361_108113863	3300012362	Vadose Zone Soil	MEGVIMTNRRRSATARSVPAQTPEQLLELTQEHIRPLIGMI
Ga0137358_107704003	3300012582	Vadose Zone Soil	MTNRRRSATIRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAED
Ga0126369_114409741	3300012971	Tropical Forest Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDR
Ga0182036_106888141	3300016270	Soil	MTNRRRSATTRSVPAQTSEQLLELTQEHIRPLIGLIDRLSEAGAEDELR
Ga0182036_112596771	3300016270	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRV
Ga0182041_115760112	3300016294	Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEAGAEDEL
Ga0182033_102138795	3300016319	Soil	MTNRRRSATRSVPAQTPEQLLDVAQEHIRPLIGVIDQLNEADAE
Ga0182035_116460401	3300016341	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELR
Ga0182032_105267722	3300016357	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVINRQ
Ga0182032_111546791	3300016357	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEA
Ga0182034_115153301	3300016371	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLN
Ga0182040_113560672	3300016387	Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGL
Ga0182037_100514231	3300016404	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNDAGAEDE
Ga0182037_104869591	3300016404	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPL
Ga0182039_106784011	3300016422	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLI
Ga0182038_100400001	3300016445	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPL
Ga0182038_120074222	3300016445	Soil	MTNRRRSVTARSVPAQTPEHLLELTQEHIRPLIPLIDRLNEAGAEDELKV
Ga0126371_105296341	3300021560	Tropical Forest Soil	MTKHRRSATTRLVSAETPERLPQLTQEHIRPLIGLSDRLNEAGA
Ga0126371_131448472	3300021560	Tropical Forest Soil	MTNRRSSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEAGAEDELKVI
Ga0207646_101595772	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTKGRRSATARSVPAQTPEQLLELTQEHIRPLIAMIDDLASRRNSAI
Ga0209701_103976992	3300027862	Vadose Zone Soil	MTNRRRSATARSVPAQTPEQLLELTQEHIRPLIGMIDRLNQAGAEDELKVIS
Ga0209465_104796171	3300027874	Tropical Forest Soil	MTKHRRSATTRLVSAETPERLLELTQEHIRPLIGLIDRLNEAG
Ga0318516_105850043	3300031543	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGVIDRL
Ga0318534_102395262	3300031544	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLNEAGAEDELKVISRQ
Ga0318541_105096661	3300031545	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVIN
Ga0318538_100382372	3300031546	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLNEAG
Ga0318538_103488771	3300031546	Soil	MTNRRRSATTHSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRVIRQQ
Ga0318528_107408021	3300031561	Soil	MINRRRSATARSVPTQTPEQLLELTQEHIRPLIAVIDRLNEAGAEDELRVITKQL
Ga0318573_102472202	3300031564	Soil	MTSRRRSATTRSVPAQTSEQLLELTQEHIRPLIGLI
Ga0318573_102843171	3300031564	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLNEAGAEDELKVISRQL
Ga0310915_103075522	3300031573	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLI
Ga0318555_102039041	3300031640	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGVIDRLNEADAEDELRVI
Ga0318555_105944651	3300031640	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEAG
Ga0318542_101187751	3300031668	Soil	MTNRRRSATTRSVPAQTSEQLLELTQEHIRPLIGL
Ga0318561_100303284	3300031679	Soil	MTNRRRSATARSVPAQTPEQLLELSQEHIRPLIGMIDRLNEAGAEDELRV
Ga0318574_100459658	3300031680	Soil	MNNRRRSATTRSVPAQTPEQLLELTQEHIRPLIGLIDRLSEAGAEDELRV
Ga0318572_101142821	3300031681	Soil	MTKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNEAGA
Ga0318572_102405471	3300031681	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDR
Ga0318560_100900631	3300031682	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEA
Ga0318496_100987452	3300031713	Soil	MTNRRRSATARSVPAQTPEQLLEQTQEHIRPLIGMIDRLNEAGAEDELRVITR
Ga0318496_105858822	3300031713	Soil	VTNRRRSATTRSVSAQTPDQFLEQAQEHIRPLIGLIDRLNEANAED
Ga0306917_100580246	3300031719	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRL
Ga0306917_100600101	3300031719	Soil	MTHRRRSATARSVPAQTPEQLLELTQEHIRPLIAMIDRLNEAGAEDELRVVTK
Ga0306917_114027671	3300031719	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRVIR
Ga0318493_103366202	3300031723	Soil	MTHRRRSATARSVPAQTPEQLLELTQEHIRPLIAMIDRLN
Ga0318501_102709601	3300031736	Soil	MTNRRRSPTARSVPAQTPEQLLALSQEYIRPLIRMIDRLNEAGAEDELR
Ga0318501_107037321	3300031736	Soil	MTNRRRSATTRSVPAQSPEQLLEVAQEHIRPLIGVIDRL
Ga0306918_106467392	3300031744	Soil	MTKRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEA
Ga0306918_113797892	3300031744	Soil	MTNRRRSATTRSVTAHTPEQLLELTQEHIRPLIPLIDRLNEAGAEDELK
Ga0318502_100697611	3300031747	Soil	MTNRRRSATTRSVPAQTSEQLLELTQEHIRPLIGLIDRFSEAGAE
Ga0318537_100859933	3300031763	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLI
Ga0318537_102713291	3300031763	Soil	MTKHRHSATTRSVPAGTPERLFELTQEHIRPLIPLIDRLNEAGAEDE
Ga0318526_104758431	3300031769	Soil	VTNRRRSATTRSVSAQTPDQFLEQAQEHIRPLIGLIDRL
Ga0318547_105671731	3300031781	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVINR
Ga0318552_102334841	3300031782	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNEAGAEDE
Ga0318557_105137671	3300031795	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLNEAGAEDELKVISR
Ga0318523_101835381	3300031798	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEVGAEDEL
Ga0318497_101630861	3300031805	Soil	VTNRRRSATTRSVSAQTPDQFLEQAQEHIRPLIGLIDQLNEANAEDELRVIN
Ga0318567_105123841	3300031821	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEAGAEDELK
Ga0310917_108326662	3300031833	Soil	MTDRRRPATTRSVSAQTPEQLLEQAQEYIRPLIGVID
Ga0310917_111002301	3300031833	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIRLIDRLNE
Ga0310917_111273551	3300031833	Soil	MTNRRRSATTRSVPAASPEQLLEVAQEHIRPLIGVIDQLNEAN
Ga0318517_100609332	3300031835	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMIDELNE
Ga0318517_101969141	3300031835	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLN
Ga0318511_103290161	3300031845	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRL
Ga0318512_100402733	3300031846	Soil	MTNRRRSATTRSVPAQTSEQLLELTQEHIRPLIGLIDRLSEAGAEGEL
Ga0318512_106091731	3300031846	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEAGAEDELKVI
Ga0318495_104771121	3300031860	Soil	MTNRRRSATTHSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRV
Ga0318544_101789141	3300031880	Soil	MIKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNEAGAEDELRVISKQ
Ga0318551_104865371	3300031896	Soil	MTNRRRSATTRSVPAQSPEQLLEVAQEHIRPLIGVIDRLN
Ga0306923_110973842	3300031910	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEAGAEDELKV
Ga0306923_111159152	3300031910	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRL
Ga0306921_104526213	3300031912	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIRLIDRLNEAGAEDELKVISR
Ga0306921_112038154	3300031912	Soil	MTKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDR
Ga0306921_116996121	3300031912	Soil	MTNRRRSATTRSVPAQTPEQLLEVAQEHIRPLIGVIDRLNE
Ga0310912_108591691	3300031941	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMID
Ga0310912_110360171	3300031941	Soil	MTKHRHSATTRSVPAGTPERLFELTQEHIRPLIPLIDRLNEAGAEDELKVISRQ
Ga0310912_111716532	3300031941	Soil	MTNRRRSATTRSVTAHTPEQLLELTQEHIRPLIPLIDRLNEAGAED
Ga0310916_104466883	3300031942	Soil	MTNRRRSATTRSVPAQTSEQLLELTQEHIRPLIGLIDRLSEAGAEDELRAIS
Ga0310916_106164881	3300031942	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLND
Ga0310913_102208042	3300031945	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDRLNEAGAEDELKVIS
Ga0310913_103203591	3300031945	Soil	MTKHRHSATTRSVPAETPERLLELTQEHIRPLIPLID
Ga0310913_105840912	3300031945	Soil	MTNRRRSATTHSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRVIR
Ga0310913_108626761	3300031945	Soil	MTNRRHSATTHSVRAQTPEQLLELTQEYIRPLIGMIYELN
Ga0310910_100115611	3300031946	Soil	MTNRRRSATTRSVPAQTPEQLLELTQEYIRPLIPLIDRLNEAGAEDELKVIS
Ga0310910_103006581	3300031946	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGVID
Ga0310910_103394161	3300031946	Soil	MTKHRHSATTRSVPAETPERLLELTQEHIRPLIPLIDRLNEAGAEDELKVISR
Ga0310910_103759231	3300031946	Soil	MTKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNEAGAEDE
Ga0310909_103085481	3300031947	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAED
Ga0310909_114949101	3300031947	Soil	MTNRRRFATARSVPAQTPEQLLELTQEHIRPLIGMIDRLNEAGAEDE
Ga0306926_105412524	3300031954	Soil	MTKRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLIDR
Ga0306922_104962183	3300032001	Soil	MSNRRRSATNRSVPAETPERLLELTQEHIRPLIGLIDRLNEA
Ga0318569_104253591	3300032010	Soil	MTKHRHSATTRSVPAGTPERLFKLTQEHIRPLIPLIDRLNEAGAE
Ga0318507_100163701	3300032025	Soil	MNNRRRSATTRSVPAQTPEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISK
Ga0310911_103139022	3300032035	Soil	MTNRRRSATTRSVPAQTPEQLLEQAQEHIRPLIGLIDRLNEANAEDELRVI
Ga0318549_104010531	3300032041	Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLID
Ga0318556_102440911	3300032043	Soil	MTNRRRSAATRSVPAQTSEQLLELTQEHIRPLIGLIDRLREAG
Ga0318558_103616461	3300032044	Soil	MNNRRRSATTRSVPAQTPEQLLELTQEHIRPLIGLID
Ga0318506_104674361	3300032052	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRV
Ga0318533_102725163	3300032059	Soil	MTNRRRSAATRSVPAQTSEQLLELTQEHIRPLIGLIDRLSEAGAEDELRVISK
Ga0318533_107091861	3300032059	Soil	VTNHRRSATTRSVSAQTPDQLLEQAQEHIRPLIGVIDRLN
Ga0318510_103285652	3300032064	Soil	MTNRRRSATTRSVPAQTREQLLEQAQEYIRPLIGVID
Ga0318513_102759081	3300032065	Soil	MTNRRRSATTHSVPAQTPEQLLELTQEHIRPLIGLIDRLSEAGAEDELR
Ga0318514_100833923	3300032066	Soil	MTKHRRSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNDA
Ga0318514_106019862	3300032066	Soil	MIKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLID
Ga0318553_105834381	3300032068	Soil	MTNRRRSATTRSVTAHTPEQLLELTQEHIRPLIPLIDRLNE
Ga0306924_106002704	3300032076	Soil	MTKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNE
Ga0318577_101396494	3300032091	Soil	MTKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLN
Ga0318540_101161581	3300032094	Soil	MTHRRRSATARSVPAQTPEQLLELTQEHIRPLIAMIDRLNEAGAEDE
Ga0306920_1007665195	3300032261	Soil	MTKRRRSATTRSVPAQTPEQLLELTQEHIRPLIPLI
Ga0310914_103169704	3300033289	Soil	MIKRRHSATTRSVPAETPDRLLELTQEHIRPLIGLIDRLNEAGAEDELRVISK
Ga0310914_109563911	3300033289	Soil	MTNRRRSATTRSVRAQTPEQLLELTQEYIRPLIGMIDELNEAGAEDELRVI
Ga0310914_113390461	3300033289	Soil	MSNRRRSATNRSVPAETPERLLELTQEHIRPLIGLIDRLNEAGAED
Ga0310914_113541391	3300033289	Soil	MTKHRRSATTRSVPAETPERLLELTQEHIRPLIGLIDRLNEAGAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences