Metagenome / Metatranscriptome Family F046041

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046041
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	49 residues
Representative Sequence	GGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Number of Associated Samples	122
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.68 %
% of genes from short scaffolds (< 2000 bps)	85.53 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.368 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.763 % of family members)
Environment Ontology (ENVO)	Unclassified (30.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.868 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF06500	FrsA-like	35.53
PF00375	SDF	2.63
PF06532	NrsF	1.32
PF13379	NMT1_2	1.32
PF08388	GIIM	1.32
PF00144	Beta-lactamase	0.66
PF01263	Aldose_epim	0.66
PF12876	Cellulase-like	0.66
PF00326	Peptidase_S9	0.66
PF12695	Abhydrolase_5	0.66
PF07991	IlvN	0.66
PF04055	Radical_SAM	0.66
PF00293	NUDIX	0.66
PF13710	ACT_5	0.66
PF04311	DUF459	0.66
PF03328	HpcH_HpaI	0.66
PF00106	adh_short	0.66
PF00781	DAGK_cat	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.32
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.32
COG4944	Uncharacterized conserved protein	Function unknown [S]	1.32
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.66
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.66
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.66
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.66
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.66
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.66
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.66
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.29 %
Unclassified	root	N/A	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.21 %
Unclassified	root	N/A	2.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.21 %
Unclassified	root	N/A	2.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.21 %
Unclassified	root	N/A	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.66 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.66 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.66 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.21 %
Unclassified	root	N/A	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.66 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.66 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.66 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.21 %
Unclassified	root	N/A	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.32 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.66 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.66 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.66 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001087\|JGI12677J13195_1015127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300001593\|JGI12635J15846_10274903	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300002245\|JGIcombinedJ26739_100996069	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300002245\|JGIcombinedJ26739_101088855	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300002245\|JGIcombinedJ26739_101338521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300004092\|Ga0062389_101038264	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300004633\|Ga0066395_10144328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300005174\|Ga0066680_10273520	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005176\|Ga0066679_10229101	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005332\|Ga0066388_107997892	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005434\|Ga0070709_10059314	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300005436\|Ga0070713_100069105	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300005450\|Ga0066682_10715994	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005526\|Ga0073909_10405322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300005538\|Ga0070731_10793294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005554\|Ga0066661_10089026	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300005557\|Ga0066704_10563989	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005557\|Ga0066704_11006032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005557\|Ga0066704_11009458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005575\|Ga0066702_10359589	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005591\|Ga0070761_10052004	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300005602\|Ga0070762_10808115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300005602\|Ga0070762_10858283	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005602\|Ga0070762_11143196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005610\|Ga0070763_10246970	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005610\|Ga0070763_10638434	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005764\|Ga0066903_106791192	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005995\|Ga0066790_10367962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005995\|Ga0066790_10436089	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006028\|Ga0070717_11633227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300006041\|Ga0075023_100628897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006052\|Ga0075029_100612339	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006052\|Ga0075029_100798623	Not Available	642	Open in IMG/M
3300006102\|Ga0075015_100768753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300006163\|Ga0070715_10523927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300006172\|Ga0075018_10358124	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300006354\|Ga0075021_10793840	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006797\|Ga0066659_10415279	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300006804\|Ga0079221_11614825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	525	Open in IMG/M
3300007788\|Ga0099795_10227902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300009038\|Ga0099829_10070989	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300009038\|Ga0099829_11799437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009628\|Ga0116125_1115231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300009634\|Ga0116124_1113520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300009665\|Ga0116135_1107416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300009665\|Ga0116135_1164320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300009700\|Ga0116217_10667690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300010049\|Ga0123356_10009280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9720	Open in IMG/M
3300010359\|Ga0126376_10334775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300010361\|Ga0126378_13237139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010376\|Ga0126381_101644737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300011271\|Ga0137393_10950055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300011411\|Ga0153933_1041184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300012096\|Ga0137389_11489334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012189\|Ga0137388_10547844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300012685\|Ga0137397_11218725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012917\|Ga0137395_10221558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300012925\|Ga0137419_11570648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300012925\|Ga0137419_11901711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012971\|Ga0126369_10174516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300015053\|Ga0137405_1292189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300016341\|Ga0182035_10535308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300016422\|Ga0182039_10320467	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300016422\|Ga0182039_11762598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300016445\|Ga0182038_10997236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300017823\|Ga0187818_10212780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300017823\|Ga0187818_10512862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017934\|Ga0187803_10099689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300017943\|Ga0187819_10337122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300017943\|Ga0187819_10529867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300017946\|Ga0187879_10006811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7504	Open in IMG/M
3300017975\|Ga0187782_10105094	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300018038\|Ga0187855_10402658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300018040\|Ga0187862_10032118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3953	Open in IMG/M
3300018040\|Ga0187862_10871950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018042\|Ga0187871_10607504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300018044\|Ga0187890_10702526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300018057\|Ga0187858_10323497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300018060\|Ga0187765_10598193	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300018085\|Ga0187772_10346756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300018085\|Ga0187772_10434102	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300018086\|Ga0187769_10867415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300018090\|Ga0187770_10101573	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300020581\|Ga0210399_10671069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300021086\|Ga0179596_10261303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300021401\|Ga0210393_10680161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300021401\|Ga0210393_10847650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300021401\|Ga0210393_10947142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300021405\|Ga0210387_10313060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1382	Open in IMG/M
3300021405\|Ga0210387_10505454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300021407\|Ga0210383_10108820	All Organisms → cellular organisms → Bacteria → Proteobacteria	2336	Open in IMG/M
3300021407\|Ga0210383_10490594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300021420\|Ga0210394_10823333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300021433\|Ga0210391_11547384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300021474\|Ga0210390_10420569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300021475\|Ga0210392_11149224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021478\|Ga0210402_10025777	All Organisms → cellular organisms → Bacteria → Acidobacteria	5062	Open in IMG/M
3300021478\|Ga0210402_11569692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300021479\|Ga0210410_10282819	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300021479\|Ga0210410_10537683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300021559\|Ga0210409_10433493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300021559\|Ga0210409_11707464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021560\|Ga0126371_10231077	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300022515\|Ga0224546_1008734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300022722\|Ga0242657_1003947	Not Available	2130	Open in IMG/M
3300022722\|Ga0242657_1211931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300023250\|Ga0224544_1030715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300025939\|Ga0207665_10675698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300026356\|Ga0257150_1040767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300026552\|Ga0209577_10042434	All Organisms → cellular organisms → Bacteria → Acidobacteria	3887	Open in IMG/M
3300026557\|Ga0179587_11153902	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300026910\|Ga0207840_1024982	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300027000\|Ga0207803_1034194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300027625\|Ga0208044_1152564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300027701\|Ga0209447_10023442	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300027783\|Ga0209448_10068204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1196	Open in IMG/M
3300027825\|Ga0209039_10146938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300027857\|Ga0209166_10578589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300027867\|Ga0209167_10226086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300027895\|Ga0209624_10153289	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300027908\|Ga0209006_10806164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300027911\|Ga0209698_10299849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300028783\|Ga0302279_10382529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300028906\|Ga0308309_10086659	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300029916\|Ga0302148_1045884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300029922\|Ga0311363_10153972	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300029986\|Ga0302188_10048299	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300030043\|Ga0302306_10046642	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300030706\|Ga0310039_10036251	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300031231\|Ga0170824_115249046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300031469\|Ga0170819_13259346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031545\|Ga0318541_10754422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031708\|Ga0310686_102358684	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300031708\|Ga0310686_110400793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300031715\|Ga0307476_10841966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300031719\|Ga0306917_11536136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031819\|Ga0318568_10873666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	557	Open in IMG/M
3300031823\|Ga0307478_10565609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300031823\|Ga0307478_10617113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300031879\|Ga0306919_10125358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1844	Open in IMG/M
3300031890\|Ga0306925_10080179	All Organisms → cellular organisms → Bacteria → Acidobacteria	3449	Open in IMG/M
3300031890\|Ga0306925_10407462	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300031939\|Ga0308174_10784801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300031941\|Ga0310912_10218004	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300031947\|Ga0310909_11120063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031962\|Ga0307479_10055999	All Organisms → cellular organisms → Bacteria	3797	Open in IMG/M
3300032001\|Ga0306922_10276911	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300032001\|Ga0306922_10299515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1727	Open in IMG/M
3300032089\|Ga0318525_10395665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	708	Open in IMG/M
3300032180\|Ga0307471_101072356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.68%
Host-Associated	Host-Associated	1.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.26%
Aquatic	Environmental → Aquatic	18.42%
Arthropoda	Host-Associated → Arthropoda	0.66%
Fungi	Host-Associated → Fungi	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.66%
Freshwater	Environmental → Aquatic → Freshwater	13.16%
Sediment	Environmental → Aquatic → Sediment	5.26%
Peat	Environmental → Terrestrial → Peat	4.61%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.66%
Mycelium	Host-Associated → Fungi → Mycelium	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.61%
Loam	Environmental → Terrestrial → Soil → Loam	15.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.61%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.29%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.32%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.66%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.66%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12677J13195_10151271	3300001087	Forest Soil	NPYGGQNGFGMNDPSVLGPGFGCGCATPDVAASNPVLGSGSNRAVQLGLKLSF*
JGI12635J15846_102749032	3300001593	Forest Soil	FGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRATQLGLKFTF*
JGIcombinedJ26739_1009960692	3300002245	Forest Soil	PFGGQNGFGMNDPSVLGPGFGCGCATPDAAATNPVLGSGGARAIQLGLKLLF*
JGIcombinedJ26739_1010888551	3300002245	Forest Soil	NDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFVF*
JGIcombinedJ26739_1013385212	3300002245	Forest Soil	GGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
Ga0062389_1010382641	3300004092	Bog Forest Soil	ANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFIF*
Ga0066395_101443281	3300004633	Tropical Forest Soil	FGLNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGGKFIF*
Ga0066680_102735202	3300005174	Soil	GGQNGFGLNDPSAQPFGCGCATPDVAAANPVIGSGGSRAVQLALKLSF*
Ga0066679_102291011	3300005176	Soil	PYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLALKLSF*
Ga0066388_1079978921	3300005332	Tropical Forest Soil	SFANPYGGQNGLGLNDPSAQPFGCGCVTPDVAAANPIIGSGGARAVQLGFKLLF*
Ga0070709_100593143	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPSVLATGFGCGCATPDAAASNPVIGSGGSRSIQLGLKLLF*
Ga0070713_1000691051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PNFANPFGGQNGWGHNDPSVPGPGGFGCGCATPDVAASNPVIGSGGSRAIQLGLKLTF*
Ga0066682_107159941	3300005450	Soil	LNDPSAGGFGCGCATPDIAAANPAIGSGGPRSVQIGAKFVF*
Ga0073909_104053221	3300005526	Surface Soil	GQNGYGFNDPSVQPFGCGCATPDVAAANPAVGSGGSRSVQIAAKFVF*
Ga0070731_107932941	3300005538	Surface Soil	NPYGGQNGFGLNDPSARPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF*
Ga0066661_100890263	3300005554	Soil	LNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLALKLSF*
Ga0066704_105639891	3300005557	Soil	NPYGGQNGFGLNDPSVQPFGCACATPDVAAANPVIGSGGSRAVQLALKLSF*
Ga0066704_110060321	3300005557	Soil	QNGWGHNDPSVPGPGGFGCGCATPDVAASNPVIGSGGSRALQLGLKLTF*
Ga0066704_110094581	3300005557	Soil	QNGWGHNDPSVPGPGGFGCGCATPDVAASNPVIGSGGSRAVQLGLKLSF*
Ga0066702_103595891	3300005575	Soil	QNGFGLNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF*
Ga0070761_100520041	3300005591	Soil	WGHNDPSVPGPGGFGCSCATPDVAASNPIIGSGGNRAVQLGLKFTF*
Ga0070762_108081152	3300005602	Soil	NGFGMNDPSVLGPGFGCGCATPDVAASNPVLGSGSNRAVQLGLKLSF*
Ga0070762_108582831	3300005602	Soil	ANPFGGQNGWAHNDPSTGSFGCSCATPDVAASNPVIGSGGSRAIQLGLKLLF*
Ga0070762_111431962	3300005602	Soil	FANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPIIGSGGSRAVQLGLKFIF*
Ga0070763_102469701	3300005610	Soil	NPFGGQNGWAHNDPSTQSFGCGCATPDVAASNPVIGSGGSRAVQLGLKLLF*
Ga0070763_106384341	3300005610	Soil	ANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFVF*
Ga0066903_1067911922	3300005764	Tropical Forest Soil	GQNGYGFNDPSVQPFGCGCATPDVAAANPAIGSGGSRSLQLAGKIVF*
Ga0066790_103679621	3300005995	Soil	NFANPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF*
Ga0066790_104360891	3300005995	Soil	NDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFLF*
Ga0070717_116332272	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PYGGQNGFGLNDPSVQPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF*
Ga0075023_1006288972	3300006041	Watersheds	FANPYGGQNGYGNNDPGVPGFGCACNTPDVVAANPAVGSGGPRSVQLGLKFIF*
Ga0075029_1006123392	3300006052	Watersheds	NIANPYGGQNGWAHNDPSVSGGGFGCGCATPDVAASNPVIGSGSNRAVQLGLKLSF*
Ga0075029_1007986232	3300006052	Watersheds	YANNDPSAGFGMGCGCATPDQAAQNPVLGSGGARDMQLGLKLLF*
Ga0075015_1007687531	3300006102	Watersheds	PNFANPYGGQNGFGFNDPSAGGFGCGCATPDGAAANPVIGSGGSRAVQLGLKLIF*
Ga0075030_1005340871	3300006162	Watersheds	NNDPSAGFGMGCGCATPDQAAQNPVLGSGGARDMQLGLKLLF*
Ga0070715_105239271	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GQNGFGTGGFNDPSTFGAGVFGCGCATPDKAAANPVIGSGGPRATQFGLKLIF*
Ga0075018_103581241	3300006172	Watersheds	QNGFGQNDPSVGGFGCACATPDVAAANPVIGSGGSRAIQLGMKFIF*
Ga0075021_107938401	3300006354	Watersheds	GFGLNDPSAGSFGCGCATPDTAAANPVVGSGGSRAVQLGLKVIF*
Ga0066659_104152792	3300006797	Soil	FANPFGGQNGWGHNDPSVPGPGGFGCGCATPDVAASNPVIGSGGSRALQLGLKLTF*
Ga0079221_116148252	3300006804	Agricultural Soil	YGAAVGAGFNDPSDPHFGCGCATPDVVAGNPLVGSGGSRVMQLGLKFMF*
Ga0099795_102279021	3300007788	Vadose Zone Soil	QNGFGLNDPSVQPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFIF*
Ga0099829_100709891	3300009038	Vadose Zone Soil	QNGYGNNDPSVGLGFGCGCVTPDGAAANPVIGSGGSRAIQLGLKLLF*
Ga0099829_117994371	3300009038	Vadose Zone Soil	PFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFIF*
Ga0116125_11152311	3300009628	Peatland	NFANPYGGQNGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF*
Ga0116124_11135201	3300009634	Peatland	GGQNGFGLNDPSARPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFIF*
Ga0116135_11074161	3300009665	Peatland	NPYGGQNGFGFNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF*
Ga0116135_11643201	3300009665	Peatland	NFANPYGGQNGWAHNDPSVPGNGGFGCGCATPDVAASNPVIGSGGSRAIQLGMKAIF*
Ga0116217_106676901	3300009700	Peatlands Soil	NPFGGQNGWGHNDPSGGAGVFGCSFATPDVAASNPVIGSGGSRATQLGLKLTF*
Ga0123356_100092801	3300010049	Termite Gut	NDPSAPLFGCGCATPDIAAANPAIGSGGSRSVQLAAKVVF*
Ga0126376_103347751	3300010359	Tropical Forest Soil	HPNFANPYGGQNGYGFNDPSVQPFGCGCATPDVAAANPAIGSGGSRSLQLAAKFVF*
Ga0126378_132371392	3300010361	Tropical Forest Soil	WAHNDPSVPGPGGFGCGCATPDVAASNPVIGSGSNRAVQLGLKLLF*
Ga0126381_1016447371	3300010376	Tropical Forest Soil	NFANPYGGQNGYGFNDPSVQPFGCGCATPDVAAANPAIGSGGSRSVQLAARFVF*
Ga0137393_109500552	3300011271	Vadose Zone Soil	GFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
Ga0153933_10411842	3300011411	Attine Ant Fungus Gardens	LNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLALKFTF*
Ga0137389_114893342	3300012096	Vadose Zone Soil	GYGNNDPSVGLGFGCGCVTPDGAAANPVIGSGGSRAIQLGLKLLF*
Ga0137388_105478442	3300012189	Vadose Zone Soil	GLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
Ga0137397_112187251	3300012685	Vadose Zone Soil	NPFGGQNGFAHNDPSTGSFGCGCATPDVAAANPVIGSGGARATQLGLKFTF*
Ga0137395_102215581	3300012917	Vadose Zone Soil	NPYGGQNGFGLNEPSAGGFGCGCATPDVAAANPVIGSGGSRAGQLGLKLIF*
Ga0137419_115706482	3300012925	Vadose Zone Soil	GQNGWAHNDPSGGGNFFGCSCATPDVSAANPVIGSGGSRAVQFGLKLTF*
Ga0137419_119017111	3300012925	Vadose Zone Soil	GGQNGYGQNDPSTGSFGCACATPDIAAANPVVGSGGSRAVQLGLKFVF*
Ga0126369_101745161	3300012971	Tropical Forest Soil	QNGYGQNDPSVPGFGCSCATPDVAAANPVIGSGGSRAIQLGLKFIF*
Ga0137405_12921892	3300015053	Vadose Zone Soil	NGFGLNDPSAGGFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF*
Ga0182035_105353081	3300016341	Soil	NFANPYGGQNGWGHNDPSVPGVFGCSCATPDVAASNPVIGSGSSRATQLGLKFTF
Ga0182039_103204672	3300016422	Soil	GGQNGWGHNDPSVPGSGGFGCPCATPDVAASNPIIGSGGSRAVQLGLKFTF
Ga0182039_117625981	3300016422	Soil	PNFANPYGGQNGYGYNDPSVGGFGCGCATPDIAAANPAIGSGGSRSIQLGGKFIF
Ga0182038_109972361	3300016445	Soil	GQNGWAHNDPSVPGPGGFGCGCATPDVAASNPVIGSGTNRAVQLGLKLSF
Ga0187818_102127802	3300017823	Freshwater Sediment	PNFANPYGGQNGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLAGKFVF
Ga0187818_105128621	3300017823	Freshwater Sediment	GQNGFGLNDPSARPFGCGCATPDIAAANPAVGSGGPRSVQLAAKFIF
Ga0187803_100996891	3300017934	Freshwater Sediment	YGGQNGFGFNDPSVGGFGCGCATPDVAAANPAVGSGGPRSVQFGMKLIF
Ga0187819_103371221	3300017943	Freshwater Sediment	NPYGGQNGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0187819_105298672	3300017943	Freshwater Sediment	QNGFGFNDPSVGGFGCGCATPDVAAANPAVGSGGPRSVQFGMKLIF
Ga0187879_100068111	3300017946	Peatland	ANPYGGQNGFGLNDPSAPGFGCGCATPDVAAANPVIGSGGSRAVQLGLKFAF
Ga0187782_101050941	3300017975	Tropical Peatland	NGFGLNDPSVRPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFMF
Ga0187855_104026582	3300018038	Peatland	FANPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRATQLGLKFIF
Ga0187862_100321186	3300018040	Peatland	PYGGQNGFGLNDPSARPFGCGCATPDVAAANPIIGSGGSRSVQLGLKFIF
Ga0187862_108719501	3300018040	Peatland	NGFGLNDPSARPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFIF
Ga0187871_106075042	3300018042	Peatland	ANPYGGQNGFGLNDPSAGSFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0187890_107025261	3300018044	Peatland	NPYGGQNGFGLNDPSAPGFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0187858_103234972	3300018057	Peatland	YGGQNGFGLNDPSAPGFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0187765_105981932	3300018060	Tropical Peatland	PNFANPFGGQNGWAHNDPSTGSFGCSCATPDVAASNPVIGSGGSRAIQFGLKLTF
Ga0187772_103467562	3300018085	Tropical Peatland	GFGLNDPSAASFGCGCATPDIAAANPAVGSGGPRSIQLAAKFVF
Ga0187772_104341022	3300018085	Tropical Peatland	FANPFGGQNGYAHNDPSSPSTFGCGCATPDVAAANPVIGSGGSRATQFALKLIF
Ga0187769_108674152	3300018086	Tropical Peatland	FANPYGGQNGFGFNDPSVRPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFMF
Ga0187770_101015731	3300018090	Tropical Peatland	GFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLAAKFVF
Ga0210399_106710691	3300020581	Soil	FANPYGGQNGFGLNDTSLQPFGCGCATPDIAAANPAVGSGGPRSIQLAAKFTF
Ga0179596_102613031	3300021086	Vadose Zone Soil	YGQNDPSTGFFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0210393_106801611	3300021401	Soil	HPNIANPYGGQNGWAHNDPSVPGPGGFGCGCATPDVAASNPLIGSGSNRAVQLGLKLSF
Ga0210393_108476501	3300021401	Soil	FGGQNGWAHNDPSTGSFGCGCATPDVAASNPVIGSGGSRAVQLGLKLSF
Ga0210393_109471421	3300021401	Soil	PNFANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAIQFGLKFLF
Ga0210387_103130602	3300021405	Soil	NGFGMNDPSVLGPGFGCGCATPDVAASNPVLGSGSNRAVQLGLKLSF
Ga0210387_105054541	3300021405	Soil	GGQNGFGLNDPSVQPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFIF
Ga0210383_101088201	3300021407	Soil	NGFGLNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF
Ga0210383_104905941	3300021407	Soil	LNDPSVRPFGCGCATPDIAAANPAVGSGGPRSVQLGAKFTF
Ga0210394_108233331	3300021420	Soil	PYGGQNGFGLNDPSVRPFGCGCATPDVAAANPVIGSGGSRATQLGLKFTF
Ga0210394_115074591	3300021420	Soil	SGANDPSSGAGYGCGCVTMDEGGQNPVLGSGGPRDIQLGLKLLW
Ga0210391_115473841	3300021433	Soil	PYGGQNGFGLNDPSVRPFGCGCATPDIAAANPAIGSGGPRSIQLGGKFIF
Ga0210390_104205691	3300021474	Soil	NLANPYGGQNGFGLNYPSAGSFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0210392_111492241	3300021475	Soil	GFGLNDPSARPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFAF
Ga0210402_100257777	3300021478	Soil	GQNGFGLNDPSAQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0210402_115696921	3300021478	Soil	ANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAIQFGLKFLF
Ga0210410_102828192	3300021479	Soil	NGFGLNDPSAGSFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0210410_105376832	3300021479	Soil	GFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0210409_104334931	3300021559	Soil	PYGGQNGFGLNDPSAGSFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0210409_117074641	3300021559	Soil	GGQNGFGLNDPSAANFGCGCATPDVAAANPVIGSGGSRAVQLGLKFLF
Ga0126371_102310773	3300021560	Tropical Forest Soil	YGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFMF
Ga0224546_10087342	3300022515	Soil	FANPYGGQNGFGLNDPSAASFGCGCATPDVAAANPVIGSGGSRAVQLGMKLIF
Ga0242657_10039471	3300022722	Soil	NDPSVPGPGGFGCSCATPDVAASNPIIGSGGNRAVQLGLKFTF
Ga0242657_12119311	3300022722	Soil	HPNFANPFGGQNGWGHNDPSVPGVFGCSCATADVAASNPVVGSGGNRAMQLGLKFIF
Ga0224544_10307152	3300023250	Soil	GFGLNDPSAASFGCGCATPDVAAANPVVGSGGSRAVQLGLKLLF
Ga0207665_106756982	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QNGWGHNDPSVPGPGGFGCGCATPDVAASNPVIGSGGSRAIQLGLKLTF
Ga0257150_10407671	3300026356	Soil	NPYGGQNGFGMNDPSVLGPGFGCGCATPDVAASNPVLGSGSNGAVQLGLKLSF
Ga0209577_100424341	3300026552	Soil	FANPYGGQNGFGFNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF
Ga0179587_111539021	3300026557	Vadose Zone Soil	FANPYGGQNGFGLNDPSVQPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFIF
Ga0207840_10249821	3300026910	Tropical Forest Soil	FNHPNFANPFGGQNGWGHNDPGVPGPGGFGCSCASPDVAAANPIIGSGGSRAVQLGLKFT
Ga0207803_10341941	3300027000	Tropical Forest Soil	FANPYGGQNGFGQNDPSTGSFGCECATPDVAAANPVIGSGGSRAVQLGLKFIF
Ga0208044_11525642	3300027625	Peatlands Soil	GLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0209447_100234423	3300027701	Bog Forest Soil	GWGHNDPSVPGVFGCSCATADVAASNPVVGSGGNRAMQLGLKFIF
Ga0209448_100682041	3300027783	Bog Forest Soil	YGGQNGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0209039_101469382	3300027825	Bog Forest Soil	PSFANPFGGQNGWGHNDPSGGPGVFGCSCATPDVAASNPVIGSGGSRATQLGLKLTF
Ga0209166_105785891	3300027857	Surface Soil	GFGLNDPSVQPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFIF
Ga0209167_102260861	3300027867	Surface Soil	GFGLNDPSVRPFGCACATPDVAAANPVIGSGGSRAVQLGGKFIF
Ga0209624_101532892	3300027895	Forest Soil	QNGWAHNDPSTQSFGCGCATPDVAASNPVIGSGGSRAVQLGLKLIF
Ga0209006_108061641	3300027908	Forest Soil	ANPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGAKFIF
Ga0209698_102998491	3300027911	Watersheds	NGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0302279_103825291	3300028783	Bog	NPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFSF
Ga0308309_100866593	3300028906	Soil	IANPYGGQNGWAHNDPSVPGPGGFGCGCATPDVAASNPLIGSGSNRAVQLGLKLSF
Ga0302148_10458842	3300029916	Bog	QNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFSF
Ga0311363_101539721	3300029922	Fen	FANPYGGQNGFGLNDPSAPGFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0302188_100482993	3300029986	Bog	FANPYGGQNGWAHNDPSVPGSGGFGCGCATPDVAASNPVIGSGGSRAVQLGLKLAF
Ga0302306_100466423	3300030043	Palsa	YGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGAKFIF
Ga0310039_100362513	3300030706	Peatlands Soil	TGGFNDPSVPGAFGCGCATPDKAASNPVVGSGGPRATQFGLKFSF
Ga0170824_1152490461	3300031231	Forest Soil	LANPYGGQNGYGLNDPSAGSFGCGCATPDTAAANPVVGSGGSRAVQLGLKFLF
Ga0170819_132593461	3300031469	Forest Soil	NPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0318541_107544221	3300031545	Soil	YGGQNGFGLNDPSVQPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0310686_1023586843	3300031708	Soil	QNGFGLNDPSVRPFGCGCATPDVAAANPVIGSGGSRAVQLAAKFIF
Ga0310686_1104007931	3300031708	Soil	GQNGFGLNDPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0307476_108419662	3300031715	Hardwood Forest Soil	NIANPYGGQNGWAHNDPSVPGPGGFGCGCATPDVAASNPLIGSGSNRAVQLGLKLSF
Ga0306917_115361362	3300031719	Soil	FANPYGGQNGFGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0318568_108736661	3300031819	Soil	PNIANPFGGQNGWAHNDPSVPGPGGFGCGCATPDVAASNPVIGSGSNRAVQLGLKLLF
Ga0307478_105656091	3300031823	Hardwood Forest Soil	QNGFGMNDPSVLGPGFGCGCATPDAAASNPVLGSGGARAIQLGLKLLF
Ga0307478_106171131	3300031823	Hardwood Forest Soil	NFANPFGGQNGWGHNDPSVPGAGGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFVF
Ga0306919_101253581	3300031879	Soil	QNGWGHNDPSVPGVFGCSCATPDVAASNPVIGSGSSRATQLGLKFTF
Ga0306925_100801794	3300031890	Soil	NFANPYGGQNGYGLNDPSVQPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0306925_104074621	3300031890	Soil	GYGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0308174_107848011	3300031939	Soil	GGQNGFGLNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF
Ga0310912_102180042	3300031941	Soil	GQNGFGLNDPSVQPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0310909_111200631	3300031947	Soil	FANPYGGQNGYGLNDPSVQPFGCGCATPDVAAANPVIGSGGSRATQLGLKFTF
Ga0307479_100559991	3300031962	Hardwood Forest Soil	FNDPSTAGAGIFGCGCATPDKAAANPVIGSGGPRATQFGLKFLF
Ga0306922_102769113	3300032001	Soil	QNGYGLNDPSVQPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0306922_102995151	3300032001	Soil	GLNDPSAGGFGCACATPDIAAANPAIGSGGPRSVQIGAKFIF
Ga0318525_103956651	3300032089	Soil	ANPFGGQNGWAHNDPSVPGPGGFGCGCATPDVAASNPVIGSGSNRAVQLGLKLLF
Ga0307471_1010723562	3300032180	Hardwood Forest Soil	YGGQNGFGFNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046041

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences