Metagenome / Metatranscriptome Family F045977

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045977
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	56 residues
Representative Sequence	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDS
Number of Associated Samples	117
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.37 %
% of genes near scaffold ends (potentially truncated)	98.68 %
% of genes from short scaffolds (< 2000 bps)	92.11 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.711 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.158 % of family members)
Environment Ontology (ENVO)	Unclassified (44.079 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.62% β-sheet: 0.00% Coil/Unstructured: 52.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF06283	ThuA	20.39
PF13180	PDZ_2	17.76
PF00135	COesterase	3.95
PF16757	Fucosidase_C	2.63
PF07690	MFS_1	1.97
PF13620	CarboxypepD_reg	1.32
PF00079	Serpin	1.32
PF13557	Phenol_MetA_deg	0.66
PF01070	FMN_dh	0.66
PF13883	Pyrid_oxidase_2	0.66
PF00144	Beta-lactamase	0.66
PF00589	Phage_integrase	0.66
PF03992	ABM	0.66
PF08450	SGL	0.66
PF14559	TPR_19	0.66
PF13545	HTH_Crp_2	0.66
PF03572	Peptidase_S41	0.66
PF14340	DUF4395	0.66
PF00891	Methyltransf_2	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	20.39
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	3.95
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	1.32
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.66
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.66
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.66
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.66
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.66
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.66

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.71 %
Unclassified	root	N/A	3.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.71 %
Unclassified	root	N/A	3.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.71 %
Unclassified	root	N/A	3.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	24.34 %
Unclassified	root	N/A	3.29 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	21.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.95 %
Unclassified	root	N/A	3.29 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.32 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.58 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	21.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.95 %
Unclassified	root	N/A	3.29 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.32 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.58 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	21.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.95 %
Unclassified	root	N/A	3.29 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.58 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	21.71 %
Unclassified	root	N/A	3.29 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.32 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.32 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.58 %
Oleiharenicola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola	21.71 %
Unclassified	root	N/A	3.29 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.32 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1.32 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.58 %
Oleiharenicola lentus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	21.71 %
Unclassified	root	N/A	3.29 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1.32 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1.32 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103021424	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300001593\|JGI12635J15846_10202715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1310	Open in IMG/M
3300002245\|JGIcombinedJ26739_100909053	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300002558\|JGI25385J37094_10140099	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300002917\|JGI25616J43925_10125604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1041	Open in IMG/M
3300004082\|Ga0062384_100437273	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005167\|Ga0066672_10428636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	865	Open in IMG/M
3300005171\|Ga0066677_10287386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	939	Open in IMG/M
3300005187\|Ga0066675_10358896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1068	Open in IMG/M
3300005334\|Ga0068869_101361440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005435\|Ga0070714_102162924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005437\|Ga0070710_10859337	Not Available	652	Open in IMG/M
3300005439\|Ga0070711_100720896	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300005444\|Ga0070694_100686720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300005455\|Ga0070663_101193559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005467\|Ga0070706_100024551	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5550	Open in IMG/M
3300005468\|Ga0070707_102266314	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005569\|Ga0066705_10574883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005576\|Ga0066708_10242406	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300006028\|Ga0070717_10245079	All Organisms → cellular organisms → Bacteria → Acidobacteria	1581	Open in IMG/M
3300006172\|Ga0075018_10501482	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006176\|Ga0070765_100311309	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300006176\|Ga0070765_100371136	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300006358\|Ga0068871_100963434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300006804\|Ga0079221_10263388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	988	Open in IMG/M
3300006806\|Ga0079220_11659910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	557	Open in IMG/M
3300006854\|Ga0075425_100621848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300006893\|Ga0073928_10611479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300007076\|Ga0075435_101889483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300007255\|Ga0099791_10600488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	538	Open in IMG/M
3300007788\|Ga0099795_10131154	Not Available	1011	Open in IMG/M
3300009038\|Ga0099829_10984560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	699	Open in IMG/M
3300009088\|Ga0099830_10385282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1132	Open in IMG/M
3300009089\|Ga0099828_10463585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300009089\|Ga0099828_10697986	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300009089\|Ga0099828_11180971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	679	Open in IMG/M
3300011270\|Ga0137391_10634528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	893	Open in IMG/M
3300011271\|Ga0137393_10531789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300011271\|Ga0137393_11797710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	501	Open in IMG/M
3300012096\|Ga0137389_10712338	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300012096\|Ga0137389_11046184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	699	Open in IMG/M
3300012189\|Ga0137388_10021679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4846	Open in IMG/M
3300012203\|Ga0137399_10534296	All Organisms → cellular organisms → Bacteria → PVC group	985	Open in IMG/M
3300012203\|Ga0137399_10709597	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012205\|Ga0137362_10032058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	4174	Open in IMG/M
3300012205\|Ga0137362_10758025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	833	Open in IMG/M
3300012205\|Ga0137362_10974519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300012206\|Ga0137380_11447141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	572	Open in IMG/M
3300012207\|Ga0137381_11072350	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012209\|Ga0137379_11715584	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012210\|Ga0137378_10845367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300012211\|Ga0137377_10462379	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012354\|Ga0137366_11061790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	559	Open in IMG/M
3300012361\|Ga0137360_10187886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1665	Open in IMG/M
3300012361\|Ga0137360_11778555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	522	Open in IMG/M
3300012582\|Ga0137358_10188699	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300012683\|Ga0137398_10353901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	995	Open in IMG/M
3300012683\|Ga0137398_10359019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	987	Open in IMG/M
3300012683\|Ga0137398_10731513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012685\|Ga0137397_10186801	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300012685\|Ga0137397_11318686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	512	Open in IMG/M
3300012917\|Ga0137395_10409939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	971	Open in IMG/M
3300012917\|Ga0137395_11248852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012918\|Ga0137396_10512543	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012922\|Ga0137394_10100017	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300012922\|Ga0137394_10481634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1055	Open in IMG/M
3300012922\|Ga0137394_11624652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012923\|Ga0137359_10377888	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300012923\|Ga0137359_10503032	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300012923\|Ga0137359_11306956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012925\|Ga0137419_11637871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	548	Open in IMG/M
3300012927\|Ga0137416_11369808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	640	Open in IMG/M
3300012927\|Ga0137416_11721756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300012929\|Ga0137404_10742159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	890	Open in IMG/M
3300012930\|Ga0137407_10801476	Not Available	889	Open in IMG/M
3300012944\|Ga0137410_10940192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300013503\|Ga0120127_10184863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300015241\|Ga0137418_10188119	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300015241\|Ga0137418_11014780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	599	Open in IMG/M
3300015241\|Ga0137418_11017186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	598	Open in IMG/M
3300015242\|Ga0137412_10753248	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300015373\|Ga0132257_103419800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300018468\|Ga0066662_10262714	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300019887\|Ga0193729_1273343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300019888\|Ga0193751_1020254	All Organisms → cellular organisms → Bacteria	3292	Open in IMG/M
3300019890\|Ga0193728_1026414	All Organisms → cellular organisms → Bacteria → Acidobacteria	2896	Open in IMG/M
3300019890\|Ga0193728_1059181	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300019890\|Ga0193728_1224022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300020061\|Ga0193716_1122171	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300020579\|Ga0210407_11348651	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300020579\|Ga0210407_11351712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300020580\|Ga0210403_10668666	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300020583\|Ga0210401_11355498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300021168\|Ga0210406_10422222	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300021168\|Ga0210406_10651184	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300021168\|Ga0210406_10792561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300021170\|Ga0210400_11305253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300021170\|Ga0210400_11617724	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021171\|Ga0210405_10821572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300021171\|Ga0210405_11280066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300021407\|Ga0210383_11048960	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300021420\|Ga0210394_11674881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300021432\|Ga0210384_10317256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300021432\|Ga0210384_11158681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021475\|Ga0210392_11457528	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300021478\|Ga0210402_10224080	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300021478\|Ga0210402_10591256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1029	Open in IMG/M
3300021479\|Ga0210410_10244169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1610	Open in IMG/M
3300022557\|Ga0212123_10548393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300022726\|Ga0242654_10358578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300024288\|Ga0179589_10109007	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1141	Open in IMG/M
3300025898\|Ga0207692_11139344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025916\|Ga0207663_10669570	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300025934\|Ga0207686_11523571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300026295\|Ga0209234_1082818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1217	Open in IMG/M
3300026304\|Ga0209240_1015452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2912	Open in IMG/M
3300026317\|Ga0209154_1163345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912	Open in IMG/M
3300026318\|Ga0209471_1005774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6753	Open in IMG/M
3300026335\|Ga0209804_1010625	All Organisms → cellular organisms → Bacteria	5007	Open in IMG/M
3300026351\|Ga0257170_1064588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	516	Open in IMG/M
3300026354\|Ga0257180_1003626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1561	Open in IMG/M
3300026480\|Ga0257177_1009651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1261	Open in IMG/M
3300026548\|Ga0209161_10043510	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300026557\|Ga0179587_11053110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	535	Open in IMG/M
3300026557\|Ga0179587_11141715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300026557\|Ga0179587_11159526	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027502\|Ga0209622_1080180	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300027605\|Ga0209329_1122562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300027633\|Ga0208988_1083426	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300027645\|Ga0209117_1097605	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300027727\|Ga0209328_10107554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	852	Open in IMG/M
3300027862\|Ga0209701_10308451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300027911\|Ga0209698_10785470	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300028536\|Ga0137415_10188143	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300028536\|Ga0137415_10328239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Oleiharenicola → Oleiharenicola lentus	1333	Open in IMG/M
3300028673\|Ga0257175_1031943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300028906\|Ga0308309_10268969	Not Available	1432	Open in IMG/M
3300028906\|Ga0308309_11187997	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300030848\|Ga0075388_11177498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	577	Open in IMG/M
3300030991\|Ga0073994_12304154	All Organisms → cellular organisms → Bacteria → PVC group	1273	Open in IMG/M
3300031128\|Ga0170823_15060680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300031231\|Ga0170824_107416526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031231\|Ga0170824_120048563	All Organisms → cellular organisms → Bacteria → Acidobacteria	2060	Open in IMG/M
3300031446\|Ga0170820_10278242	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300031446\|Ga0170820_10995134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	596	Open in IMG/M
3300031474\|Ga0170818_107810308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300031715\|Ga0307476_10162019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300031718\|Ga0307474_11387878	Not Available	554	Open in IMG/M
3300031720\|Ga0307469_10915212	All Organisms → cellular organisms → Bacteria → PVC group	813	Open in IMG/M
3300032160\|Ga0311301_11407542	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300032174\|Ga0307470_10044164	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300032515\|Ga0348332_13375187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.39%
Host-Associated	Host-Associated	4.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.11%
Plants	Host-Associated → Plants	4.61%
Aquatic	Environmental → Aquatic	3.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.32%
Sediment	Environmental → Aquatic → Sediment	1.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.66%
Roots	Host-Associated → Plants → Roots	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.63%
Loam	Environmental → Terrestrial → Soil → Loam	13.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.97%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.32%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1030214242	3300000955	Soil	MRIRLLAVFFIGLSLLFPFGLAQTTANLDSIPARMHDVIVANEVPGAVTVVAT
JGI12635J15846_102027153	3300001593	Forest Soil	MRIRLLGVFLTLIFLPLSLGLAQTTSNLDSIPARMHDVIVANEVPGAVTVVATRDSVL
JGIcombinedJ26739_1009090532	3300002245	Forest Soil	MRIRLVAVFLAVIVLPLSFGLAQTTANLDSIPARMHDVIVANEVPGAVTVVATRDSV
JGI25385J37094_101400992	3300002558	Grasslands Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVL
JGI25616J43925_101256042	3300002917	Grasslands Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVA
Ga0062384_1004372731	3300004082	Bog Forest Soil	MRIRLLAVFLAVISLPFSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0066672_104286362	3300005167	Soil	MRIRLLTVFFIGVFLLLSFGLAQTTASLDSIPARMHDVIVANEVPGA
Ga0066677_102873862	3300005171	Soil	MRIRLLAVLLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSV
Ga0066675_103588962	3300005187	Soil	MRIRLLTVFFIEVFLLLSFGLAQTTASLDSIPARMHDVIVANEVPGA
Ga0068869_1013614401	3300005334	Miscanthus Rhizosphere	MRIRLLAVFFMGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMR
Ga0070714_1021629241	3300005435	Agricultural Soil	MRLCLLAVFVGGIFILLSFALAQTTANLDSIPARMHDVIVANEVPGAVTVVA
Ga0070710_108593371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGVRLLAVLFIGNFLLLPFGLAQTAVSLDSIPARIHDVIVANEVPGAVTVVATRDSV
Ga0070711_1007208961	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLCLLAVFVGGIFILLSFALAQTTANLDSIPARMHDEIAANEVPGAVTVVAT
Ga0070694_1006867202	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRLLAVFFMGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTV
Ga0070663_1011935592	3300005455	Corn Rhizosphere	MRIRLLAVFFMGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVL
Ga0070706_1000245517	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRLLAVFFGGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAV
Ga0070707_1022663141	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRLIAVFFGGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0066705_105748831	3300005569	Soil	MQIRLFAVFLTVLFLPLSFGLAQTAAGLDSIPVRMRNVIVANEVPG
Ga0066708_102424061	3300005576	Soil	MRLRLLAVFLTAISLPLSFGLAQTTASLDSIPGRMHHVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFM
Ga0070717_102450792	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRRLAIFLTVMFLPFSFGLAQTTASLDSIPARMHDVIVANEVPGAVT
Ga0075018_105014822	3300006172	Watersheds	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHGVIVANEVPGAVTVVT
Ga0070765_1003113093	3300006176	Soil	MLIRLLAVFFIGIFLLLPFGLAQTASSLDSIPARMHEVIVANEVPGAVTVVATRDSVLRMDAQGW
Ga0070765_1003711361	3300006176	Soil	MRIRLLAVFFIGIFLLLPFGLAQTTASLDSIPARMHEVIVANEVPGAVTVVATRDSVLRMDAQGW
Ga0068871_1009634342	3300006358	Miscanthus Rhizosphere	MRIRLLAVFFMGIFLLLPFGLAQTTASLDSIPARMHDVIV
Ga0079221_102633881	3300006804	Agricultural Soil	MRIRLLGVLLTLILLPLSFGLAQTTSSLDSIPARMHDMIVA
Ga0079220_116599101	3300006806	Agricultural Soil	MRIRLLGVLLTLILLPLSFGLAQTTSSLDSIPARMHD
Ga0075425_1006218482	3300006854	Populus Rhizosphere	MRLRLFAVFLTLLFLPLSIGVAQTTASLDSIPARMHNVIVANEVPGAVTVVATRDSVLR
Ga0073928_106114792	3300006893	Iron-Sulfur Acid Spring	MGIRFLAVFFIESFLLLPFGLAQITASLDSIPARMHDVIVANEVPGAVTVVATGDSVLRMNAQ
Ga0075435_1018894831	3300007076	Populus Rhizosphere	MRIRLLAIFFIGIVLLSPFGLAQTTASLDSIPARMHDVIVANEV
Ga0099791_106004881	3300007255	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTA
Ga0099795_101311541	3300007788	Vadose Zone Soil	MRIRLAVFLIVIFLPLSSALAQTAASLDSIPARMHDVIVSNQVPG
Ga0099829_109845602	3300009038	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWA
Ga0099830_103852821	3300009088	Vadose Zone Soil	MRIRLLGVFLTLILLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0099828_104635852	3300009089	Vadose Zone Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVANEVSGAVTVVATRDSVLRMDAQGWADPDHRSFMRVDS
Ga0099828_106979862	3300009089	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEH
Ga0099828_111809712	3300009089	Vadose Zone Soil	MGVVLTTEIDYMRIRLLAVFFIGIFLLFPFGLAQTTANLDSIPARMHDVIVANEVPGAVTVVATHDSVLRMDAQGWADPDHK
Ga0137391_106345281	3300011270	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARM
Ga0137393_105317892	3300011271	Vadose Zone Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVANEVSGAVTVVVTRDSVLRMDAQ
Ga0137393_117977101	3300011271	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDS
Ga0137389_107123381	3300012096	Vadose Zone Soil	MRIRLLAVFLTAIFLPLSFGLAQTTSSLDSIPARMHNVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMRVD
Ga0137389_110461842	3300012096	Vadose Zone Soil	MGVVLTTEIDYMRIRLLAVFFIGIFLLFPFGLAQTTANLDSIPARMHDVIVANEVPGAVTVVATHDSVLRM
Ga0137388_100216793	3300012189	Vadose Zone Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVAN
Ga0137399_105342961	3300012203	Vadose Zone Soil	MEIDYMRIRLLAGFFIGIFLLLPFGLAQTTASLDSI
Ga0137399_107095972	3300012203	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANE
Ga0137362_100320582	3300012205	Vadose Zone Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVANEVPG
Ga0137362_107580251	3300012205	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRM
Ga0137362_109745192	3300012205	Vadose Zone Soil	MRIRILAVFFIGMFFLLPLGLAQTAASLDSIPARMHDMIVANEVPGAVTVVATRDSVLRMDAQGWADPE
Ga0137380_114471411	3300012206	Vadose Zone Soil	MRIRLLTVFFIGVFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDS
Ga0137381_110723501	3300012207	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGLTQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWA
Ga0137379_117155841	3300012209	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARIHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMRVDSIF
Ga0137378_108453672	3300012210	Vadose Zone Soil	MRLRLFAVFLTVLFLPLSFGLAQTAAGLDSIPARMRNVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMRVDS
Ga0137377_104623791	3300012211	Vadose Zone Soil	MDRLLFNLTREIDYMRIRPLAVFFTVIFLPFSFGLAQTTASLDSIPGRMHDVIVANEVPGAVTVVATRDSVLRMDAQG
Ga0137366_110617902	3300012354	Vadose Zone Soil	MRIRLLTVFFIGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSV
Ga0137360_101878861	3300012361	Vadose Zone Soil	MRIRPLAVFFTVIFLPFSFGLAQTTASLDSIPGRMHDVIVANEVPGAVTVVATRDSVLRMDAQGW
Ga0137360_117785552	3300012361	Vadose Zone Soil	MRIRLLGVFLTLILLPLSFGLAQTTSSFDSIPARMHDVIVANEVPGAA
Ga0137358_101886991	3300012582	Vadose Zone Soil	MRIRLLAGFFIGIFLLLPFGLAQTTVSLDSIPARMHDVIVAKEVPGVVTVVATRDSVLRMDAQGWADPEHKSF
Ga0137398_103539011	3300012683	Vadose Zone Soil	MRIRLLGVFLTLIFLRLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDS
Ga0137398_103590191	3300012683	Vadose Zone Soil	MRIRLLAVFLTAIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRM
Ga0137398_107315131	3300012683	Vadose Zone Soil	MRIRLLAVFFIGIVLLLPFGLAQTTVSLDSIPARMHDVIVANEVPGAVTVVATRDSVLR
Ga0137397_101868013	3300012685	Vadose Zone Soil	MRIRFLGVFLPVIFLPLSFGLAQTTASLDSIPARIHDVIVANEVPGAVTVV
Ga0137397_113186862	3300012685	Vadose Zone Soil	MRIRLLGAFLTLIFLPLSFGLAQTTASLDSIPARIHDVIVANEVPGAVTVVATRDSVLRMDAQGW
Ga0137395_104099391	3300012917	Vadose Zone Soil	MRIRLLGVFLTLIFLRLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVAT
Ga0137395_112488521	3300012917	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGLAQTAASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSF
Ga0137396_105125431	3300012918	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVP
Ga0137394_101000172	3300012922	Vadose Zone Soil	MRIRLLAGFFIGIFLLLPFGLAQTTVSLDSIPARMHDVIVAKEVPGVVTVVATRDSVLRMDAQGWADPEHKSFMRV
Ga0137394_104816341	3300012922	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGHAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0137394_116246522	3300012922	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMRVD
Ga0137359_103778882	3300012923	Vadose Zone Soil	MRIRLLGIFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVA
Ga0137359_105030322	3300012923	Vadose Zone Soil	MRIRPLAVFFTVIFLPFSFGLAQTTASLDSIPGRMHDVIVANEVPGAVTVV
Ga0137359_113069561	3300012923	Vadose Zone Soil	MRIRPLAVFSLGIFLLPFGLAQTTASLDSIPARMHEVIVANEVPGAVTVVATGDSVL
Ga0137419_116378711	3300012925	Vadose Zone Soil	MRIRLLGVFLTLIFLRLSFGLAQTTSSLDSIPARMHDVIVANEAPGAVTVVATRDSVLRMDAQGWADPEHKSFMR
Ga0137416_113698081	3300012927	Vadose Zone Soil	MRIRLLAAFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWA
Ga0137416_117217561	3300012927	Vadose Zone Soil	MRIRPLAVFFTVIFLPFSFGLAQTTASLDSIPGRMHDVIVANEVPGAVTVVATRDSVLRMDAQGWSDPEYKSFMRVDS
Ga0137404_107421592	3300012929	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGA
Ga0137407_108014761	3300012930	Vadose Zone Soil	MRIRLLAVFLTVICLPLSLGLAQTTASLDSIPARMHDVIVANEVPGAVT
Ga0137410_109401922	3300012944	Vadose Zone Soil	MRIRLLDVFLTAIFLPLSFGLAQTTASLDSIPARMHD
Ga0120127_101848631	3300013503	Permafrost	MPIRPAVFLTVILLPLSSALAQTAASLDSIPARMHDVIVANEVPGAVT
Ga0137418_101881191	3300015241	Vadose Zone Soil	MRIRLLAGFFIGIFLLLPFGLAQTTVSLDSIPARMHDVIVAKEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMRVDS
Ga0137418_110147802	3300015241	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHEVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMR
Ga0137418_110171862	3300015241	Vadose Zone Soil	MRIRLLAAFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMR
Ga0137412_107532481	3300015242	Vadose Zone Soil	MRIRILAVFFIGMFFLLPLGLAQTAASLDSIPARMHDMIVANEVPGAVTVVATRDSVHRMDAQG
Ga0132257_1034198001	3300015373	Arabidopsis Rhizosphere	MRIRFVAVFLAVTVLPLSFGLAQTTANLDSIPARMREVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0066662_102627141	3300018468	Grasslands Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGA
Ga0193729_12733432	3300019887	Soil	MRIRLAVFLTAIFVPLSFGLAQTTVSLDSIPARMHDMIVANEVPGVVTVVATRGSVLRIN
Ga0193751_10202544	3300019888	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRM
Ga0193728_10264141	3300019890	Soil	MRIRLLAVFLSLIFLPVSFGLAQTAASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQG
Ga0193728_10591811	3300019890	Soil	MRIRLLAVFFGGIFVLLPFGLAQTTAGLDSIPARMHEVILANEVPGAVTVV
Ga0193728_12240221	3300019890	Soil	MRIRLLAVFFIEIFLLLPFGLAQTTAGLDSIPARMHDV
Ga0193716_11221712	3300020061	Soil	MRIRLLAVFLIGMFLLFPFGLAQTTASLDSIPARMHAVIV
Ga0210407_113486511	3300020579	Soil	MRIRLLGVLITLILLPLSFGLAQTTSSLDSIPARMHDV
Ga0210407_113517121	3300020579	Soil	MRIRLLTVFFIGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRD
Ga0210403_106686661	3300020580	Soil	MRIRLLAVFLTVIFLPLSFGLAQTAASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWA
Ga0210401_113554981	3300020583	Soil	MRIRLLAVFLTIIFLPLSFGLAQTAASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWAD
Ga0210406_104222223	3300021168	Soil	MQIRLLALFLTVIFLPLSFGVAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDS
Ga0210406_106511841	3300021168	Soil	MRIRLLGVLLTLVLLPLSFGLAQTTSSLDSIPARMHD
Ga0210406_107925611	3300021168	Soil	MRIRLLTVFFIGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRLDAQGWADPE
Ga0210400_113052531	3300021170	Soil	MRIRHLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVAP
Ga0210400_116177241	3300021170	Soil	MRIRLLGVLITLILLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTV
Ga0210405_108215722	3300021171	Soil	MRIRHLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVI
Ga0210405_112800662	3300021171	Soil	MRIRLLGVFLAVIFLPLFFGFAQTTAGLDSIPAHMHDV
Ga0210383_110489602	3300021407	Soil	MQIRLLGVFLTVIFLPLSFGHAQTTAGLDTIPARMHDVIVANEVPGAVTVVAMRD
Ga0210394_116748811	3300021420	Soil	MRIRLLVYLTVTFLPIPFGLAQTTASLDSIPARMHDQIVANEVPGPVTVVATRDSVLRMD
Ga0210384_103172561	3300021432	Soil	MRIHLLAILLTVIFLPLSLGLAQTTASLDSIPARMHDVIVAN
Ga0210384_111586811	3300021432	Soil	MLIRLLAVFFIGIFLLLPFGLAQTTASLDSIPARMHEVIVANEVPGAVTVVATR
Ga0210392_114575281	3300021475	Soil	TKEIDLLAFFLTVILLIISFGLAQTAAGLDPIPARMHDVIVANEVPG
Ga0210402_102240801	3300021478	Soil	MRIRLLGVFSSLILLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRM
Ga0210402_105912561	3300021478	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADSEHKSFMR
Ga0210410_102441691	3300021479	Soil	MRIRLLTVFFIGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRLDAQGWADPEHK
Ga0212123_105483931	3300022557	Iron-Sulfur Acid Spring	MGIRFLAVFFIESFLLLPFGLAQTTAGLDSIPARMHDVIVANEVPGAVTVVATR
Ga0242654_103585781	3300022726	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADSEHKSFM
Ga0179589_101090071	3300024288	Vadose Zone Soil	MRIRPLAVFLTIAFLPLCFGLAQTTASLDSIPARMHDVIVDNEV
Ga0207692_111393441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRLLAVFFMGIFLLLPFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRM
Ga0207663_106695701	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLCLLAVFVGGIFILLSFALAQTTANLDSIPARMHDVIVANEVPG
Ga0207686_115235711	3300025934	Miscanthus Rhizosphere	MRIRLLPVFFIGMFLLLPLGLAQTTASLDSIPARMHDAIVANEVPGAVTVVATRDSVLRMDA
Ga0209234_10828182	3300026295	Grasslands Soil	MRIRLLAVFLIVIFLPLSFGLAQTAASLDSIPARMHDVIAANEVPGAVTVVATRDSVLRMDAQGWADPERKSF
Ga0209240_10154522	3300026304	Grasslands Soil	MRIRLLGIFLTLIFLPLSFGVAQTTSSLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDA
Ga0209154_11633451	3300026317	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAV
Ga0209471_10057741	3300026318	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSV
Ga0209804_10106251	3300026335	Soil	MRIRLLAVFLIVIFLPLSFGLAQTAASLDSTPARMHDVIVANEVPGAVTV
Ga0257170_10645882	3300026351	Soil	MRIRLLAVFLTAIFLPLSFGLAQTTAGLDSIPARMHDVIVANE
Ga0257180_10036261	3300026354	Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVI
Ga0257177_10096511	3300026480	Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVP
Ga0209161_100435103	3300026548	Soil	MRLRLLAVFLTAISLPLSFGLAQTTASLDSIPGRMHHVIVANEVPGAVTVVATRDSVLRMDAQG
Ga0179587_110531102	3300026557	Vadose Zone Soil	MRIRLLGVFLTLIFLPLSFGLAQTTSSLDSIPARMHDVIVANEVPGAVTAVATRDSVLRMDAQG
Ga0179587_111417151	3300026557	Vadose Zone Soil	MRIRLLAGFFIGIFLLLPFGLAQTTVSLDSIPARMHDVIVAKEIPGAVTVVATRD
Ga0179587_111595261	3300026557	Vadose Zone Soil	MRIRPLAVFFTVIFLPFSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDP
Ga0209622_10801802	3300027502	Forest Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVA
Ga0209329_11225621	3300027605	Forest Soil	MRIRLLAVFFIGIVLLSPFGLAQTTASLDSIPARMHDVIVANEVPGAVT
Ga0208988_10834261	3300027633	Forest Soil	MRIRLLAAFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANGLGIV
Ga0209117_10976052	3300027645	Forest Soil	MRIRPLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVAN
Ga0209328_101075542	3300027727	Forest Soil	MRILLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDV
Ga0209701_103084511	3300027862	Vadose Zone Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVANEVSGAVTVVATRDSVLRMDAQGWADPEHRSFM
Ga0209698_107854702	3300027911	Watersheds	MRIRLLAVFFVGSFLLLLFGLAQTTANLDSIPARMHDVIVANEVPGAV
Ga0137415_101881431	3300028536	Vadose Zone Soil	MRIRLLAVFFIGIVLLPPFGLPQTTASLDSIPARMHDVIVANEVPGAVTVVATRDS
Ga0137415_103282391	3300028536	Vadose Zone Soil	MRIRLLAVFLTVIFLPLSFGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLRMDAQGWADPEHKSFMR
Ga0257175_10319431	3300028673	Soil	MRIRLLAVFFIGMFLLLPSGLAQTAASLDSIPARMHDVIVANE
Ga0308309_102689691	3300028906	Soil	MRIRLLAVFFIGIFLLLPFGLAQTTASLDSIPARMHEVIVANEVPGAVTVVATRDSVL
Ga0308309_111879971	3300028906	Soil	MQIRLVAVFLAVIVLPLSTGFAQTTASLDSIPTRMHDVIVANEVPGAVTVVA
Ga0075388_111774982	3300030848	Soil	MRIRLSVFLTVVFLPLSFALAQTTASLDSIPARMRDMIVANEVPGAVTVV
Ga0073994_123041542	3300030991	Soil	MRILLAVFLTVICLPLSSGLAQTAASLDSIPARMHDMIVANEVPGAVTVV
Ga0170823_150606801	3300031128	Forest Soil	MRIRLLAVLFIGIFLLLPFGLAQTTAGLDSIPAHMHDVIVANEVPGAV
Ga0170824_1074165261	3300031231	Forest Soil	MRIRLLAVFFIGMFLSLPFGLAQTTAGLDSIPAHMHEVIVANEVPGAVTVVATRD
Ga0170824_1200485633	3300031231	Forest Soil	MRIRLLAVFFIGIFLGLPFGLAQTTAGLDSIPAHMHDVIVANEV
Ga0170820_102782422	3300031446	Forest Soil	MRIRLLAFFLTVLLLPLSFGLAQTAAGLDSIPARMHDVIVANEVPGVVTVVATRDSVLRMDAQGWADPE
Ga0170820_109951341	3300031446	Forest Soil	MRIRLLAVFFIGIVLLSPFGLAQTTASLDSIPARMHDVIVANEVPGAV
Ga0170818_1078103082	3300031474	Forest Soil	MRIRLLAVFSIGIFVLLPFGLAQTAVSLDSIPGRMHEVIVANEVPGAVTVVATRDSVLRVDAQGWADPDHKSFM
Ga0307476_101620191	3300031715	Hardwood Forest Soil	MLIRLLAVFFIGIFLLLPFGLAQTASSLDSIPARMHE
Ga0307474_113878781	3300031718	Hardwood Forest Soil	MRIRLLAVFFIEIFLLSPFGFTQTTASLDSIPARMRDVIVANEVPGAVTVV
Ga0307469_109152121	3300031720	Hardwood Forest Soil	MRIRLAVFLTVIFLPLFFALAQTTAGLDFIPARMHDMIVANEVT
Ga0311301_114075422	3300032160	Peatlands Soil	MRIRLLAVVFIGIFLLLPFGFAQTAASLDSIPARMHDVIVANEVPGAVTVVATGDSVLRMDAQGWADTEHK
Ga0307470_100441642	3300032174	Hardwood Forest Soil	MRIRLVAVLLAIIILPVSFGLAQTTAGLDSIPARIHDVIVANEVSGAVT
Ga0348332_133751872	3300032515	Plant Litter	MRIRLLAVFLTVIFLPLSSGLAQTTASLDSIPARMHDVIVANEVPGAVTVVATRDSVLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045977

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences