NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045976

Metagenome / Metatranscriptome Family F045976

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045976
Family Type Metagenome / Metatranscriptome
Number of Sequences 152
Average Sequence Length 71 residues
Representative Sequence PPGVTVSDPVTIKFFKKEACDKPTPQGYNCTFDVQVASANIGASMYNNIPGAVFYKDKDSGKWAMRPPF
Number of Associated Samples 108
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.82 %
% of genes near scaffold ends (potentially truncated) 70.39 %
% of genes from short scaffolds (< 2000 bps) 80.92 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(21.053 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(68.421 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.
1JGI12631J13338_10188613
2JGI12635J15846_100087244
3JGI12635J15846_100914963
4Ga0062384_1007085552
5Ga0062387_1000582761
6Ga0062389_1007780641
7Ga0062389_1045503121
8Ga0062386_1018737201
9Ga0070735_103401862
10Ga0070731_100949553
11Ga0070733_103131802
12Ga0070732_100657383
13Ga0070761_104240811
14Ga0070762_100611803
15Ga0070762_112660231
16Ga0070764_109731671
17Ga0080026_101125033
18Ga0075029_1001734713
19Ga0075029_1004372762
20Ga0075018_106183052
21Ga0070765_1008995931
22Ga0070765_1021204082
23Ga0075521_106187772
24Ga0116135_12514331
25Ga0116135_13020851
26Ga0074044_100322022
27Ga0136449_1010709201
28Ga0136449_1023046841
29Ga0136449_1037778121
30Ga0126344_13046761
31Ga0126350_113207271
32Ga0126350_120933152
33Ga0137404_100069355
34Ga0182018_100193342
35Ga0182018_100519493
36Ga0182018_101375941
37Ga0182018_103041241
38Ga0182015_103678022
39Ga0182015_108001231
40Ga0182015_109194092
41Ga0182024_1002091812
42Ga0182024_117223572
43Ga0182030_100954343
44Ga0182030_100986372
45Ga0182030_102535232
46Ga0182030_102730061
47Ga0167639_10100472
48Ga0137412_104351162
49Ga0187812_10238401
50Ga0187808_102072521
51Ga0187804_102217071
52Ga0187883_106659242
53Ga0187871_100274535
54Ga0187887_108234041
55Ga0187859_101150593
56Ga0187859_107257231
57Ga0182025_10256812
58Ga0210403_108548191
59Ga0210399_101763403
60Ga0210395_100013497
61Ga0210404_109135692
62Ga0210408_103902051
63Ga0210388_111542852
64Ga0210388_111632382
65Ga0210388_111875841
66Ga0210385_103320432
67Ga0210389_105227291
68Ga0210386_108551521
69Ga0210383_104797361
70Ga0210383_105854111
71Ga0210383_117181652
72Ga0210384_113413132
73Ga0210391_102930671
74Ga0210391_106234503
75Ga0210391_115171192
76Ga0210392_104838321
77Ga0210398_100241861
78Ga0210410_112255302
79Ga0210409_102803272
80Ga0212123_108564082
81Ga0224551_10441501
82Ga0224551_10827421
83Ga0208220_11647681
84Ga0207693_111038452
85Ga0207663_103627162
86Ga0209010_10128073
87Ga0208987_10480292
88Ga0209419_10593651
89Ga0209116_10807683
90Ga0209329_10734902
91Ga0209221_10205204
92Ga0209221_11254552
93Ga0209038_101100952
94Ga0209448_100036622
95Ga0209580_101168573
96Ga0209580_104365991
97Ga0209274_103469001
98Ga0209169_101686651
99Ga0209380_101867832
100Ga0209380_104751971
101Ga0209006_101290931
102Ga0209006_105320753
103Ga0302301_10016844
104Ga0302267_102484701
105Ga0302233_100490154
106Ga0302219_100185721
107Ga0302219_103972811
108Ga0302224_100874421
109Ga0302234_101593322
110Ga0302231_104827632
111Ga0302227_100724331
112Ga0302222_100120308
113Ga0302222_102398172
114Ga0302222_103887481
115Ga0265338_106039112
116Ga0247275_10369152
117Ga0311368_1000460717
118Ga0311340_109754412
119Ga0311340_113657062
120Ga0311352_101686991
121Ga0311352_114851222
122Ga0311371_107305381
123Ga0311339_119117762
124Ga0302177_100500833
125Ga0302177_106892192
126Ga0302179_104337501
127Ga0311357_102532764
128Ga0311357_116268221
129Ga0311356_100303878
130Ga0265753_10806522
131Ga0170824_1191523082
132Ga0302325_105833631
133Ga0302325_124288921
134Ga0302324_1000840725
135Ga0302324_1012387751
136Ga0302324_1015580422
137Ga0302324_1019775072
138Ga0170820_104368541
139Ga0170818_1081986921
140Ga0302326_1000398624
141Ga0302326_128574472
142Ga0265313_100256502
143Ga0310686_1113002003
144Ga0310686_1144435461
145Ga0307469_100403004
146Ga0307468_1015228741
147Ga0307471_1022181012
148Ga0335085_110647022
149Ga0334854_025685_4_246
150Ga0370515_0358647_234_488
151Ga0370514_129212_10_228
152Ga0370514_201405_16_216
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.19%    β-sheet: 32.99%    Coil/Unstructured: 60.82%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060PPGVTVSDPVTIKFFKKEACDKPTPQGYNCTFDVQVASANIGASMYNNIPGAVFYKDKDSGKWAMRPPFSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
62.5%37.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Peatland
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Soil
Vadose Zone Soil
Glacier Forefield Soil
Surface Soil
Peatlands Soil
Arctic Peat Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Bog Forest Soil
Permafrost Soil
Bog
Palsa
Permafrost
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Palsa
Bog
Rhizosphere
Boreal Forest Soil
3.3%4.6%3.9%14.5%4.6%7.9%6.6%21.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12631J13338_101886133300001131Forest SoilVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF*
JGI12635J15846_1000872443300001593Forest SoilVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVASANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF*
JGI12635J15846_1009149633300001593Forest SoilLCNETSPFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF*
Ga0062384_10070855523300004082Bog Forest SoilTITFFKKEACDAPTPQGFRCTFDVKVASRNIGASMYNNIPFAWFYKDKGTGKWAMRPPF*
Ga0062387_10005827613300004091Bog Forest SoilPPGEPAGDPIKITFFQKEACDAPTPQGYKCTFTVKVASANIGASMYNNIPFGEFYKDKESGKWKMRPPF*
Ga0062389_10077806413300004092Bog Forest SoilYAMNHPPGIVNAAPIAIKFFKKEACDAKPTAQGFHCTFDIQVTSANIGASMYNNISMGEFYLDKETGKWNMRPPF*
Ga0062389_10455031213300004092Bog Forest SoilGEPITITFFKKEACDAPTPQGFRCTFTVKVASRNIGASMYNNIPYGEFYKDKETGKWAMRPPF*
Ga0062386_10187372013300004152Bog Forest SoilEEPSEAQMKEAALYAINHPPGMANSEPITIKFFKKEACENPTPKGYSCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF*
Ga0070735_1034018623300005534Surface SoilSEPSEAEMRDAMLNAMNHPPGETVSDPIEIKFFKKEACDKSTPQGFRCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF*
Ga0070731_1009495533300005538Surface SoilMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF*
Ga0070733_1031318023300005541Surface SoilSEPSEAQMKDAMLDAMNHPPGVAVSDPVKITFFKKGACDNPSPQGFDCTFTVNVASANIGASMYNNIPKGVFYKDKDSGKWMMRPPF*
Ga0070732_1006573833300005542Surface SoilVEALDLNPAMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNLGASMYNNIPFGEFYKDKETGKWMMRPPF*
Ga0070761_1042408113300005591SoilLYAINHPPGITNSEPITIKFFKKEACDNPTPKGYSCSFDWQVASANIGASMYNNISNAFFYKDKDSGKWAMRPPF*
Ga0070762_1006118033300005602SoilVSDPVTIKFFKKEACDPPTAQGFRCTFDVQVASANIGASMYNNVPFAFFYKESGKWNMRPPF*
Ga0070762_1126602313300005602SoilVKIVFFKKEACDAPTPQGFRCTFDVKVASRNIGASMYNNIPFGFFYKDKDTGKWAMRPPF
Ga0070764_1097316713300005712SoilVSDPVTIKFFKKEACDKPTPQGYNCTFDVQVASANIGASMYNNIPGAVFYKDKDSGKWAMRPPF*
Ga0080026_1011250333300005952Permafrost SoilGEPSESQMKEAMLYAMNHPPGIQNSEPITIKFFKKEACENPTPMGYNCRFDIQVASANIGASMYNNVPMGFFYVDKETGKWAMRPPF*
Ga0075029_10017347133300006052WatershedsMKDAALYAINHPPGMTNSDPITIKFFKKEACDAPTPKGYSCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF*
Ga0075029_10043727623300006052WatershedsPGEAPGAPITIKFFKKEACDNPTPQGYNCTFDVKVESTNLGASIYNNIPGGVFYVDKDTGKWNMRPI*
Ga0075018_1061830523300006172WatershedsMKTAMLDAMNHPPGITVSEPVKVNFFKKGACDNPTPQGYNCTFTVTVASANIGAGMYNNVPSGVFYKDKDSGKWMMRPPF*
Ga0070765_10089959313300006176SoilEPSEAEMRDAMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF*
Ga0070765_10212040823300006176SoilGITNSEPITIKFFKKEACDNPTPKGYSCSFDWQVASANIGASMYNNISNAFFYKDKDSGKWAMRPPF*
Ga0075521_1061877723300006642Arctic Peat SoilSDPITIKFFKKEACDNPTPQGYNCRFDWQVASANIGASMYNNISSSFFYQDKDSGKWAMRPPF*
Ga0116135_125143313300009665PeatlandPITIKFFKKEGCESPTPMGFNCHFDVQVASANLGASMYNNIPMAYFYVDKDSGKWAMRPPF*
Ga0116135_130208513300009665PeatlandMTNSEPITIKFFKKEACENPTPKGYSCSFDWQVASANIGASMYNNISNAFFYKDKDSGKWAMRPPF*
Ga0074044_1003220223300010343Bog Forest SoilMRAAMLEEMNHPPGETVSEPVTITFFKKEACDAPTPQGFRCTFDVKVASRNIGASMYNNIPFAWFYKDKGTEKWAMRPPF*
Ga0136449_10107092013300010379Peatlands SoilMKDAMLDAMNHPPGTTVTEPVTITFFKKGACDNPTPQGYNCTFTVTVASTNIGASMYNNVPSGVFYKDKDSGKWMMRPPF*
Ga0136449_10230468413300010379Peatlands SoilQMKDAMEFAMNHPPGVTNSEPIKITFFKKEACDKPAEQGFRCTFTVMVASANIGAGMYNNISMGYFYKDKESGKWMMRPPF*
Ga0136449_10377781213300010379Peatlands SoilIKFFKKEACNKPPTAQGFHCTFEVQVASSNIGASMYNNITFGDFYKDDSGKWAMRPPF*
Ga0126344_130467613300010866Boreal Forest SoilIVFFKKEACDNPTPQGFRCTFTVKVSSRNIGASMYNNIPFGEFYKDKASEKWMMRPPF*
Ga0126350_1132072713300010880Boreal Forest SoilPGEPAGDPITITFFKKEACDTPTPKGYNCSFDVKVASTNIGASMYNNIPGAWFYKDKDSGKWMMRPPF*
Ga0126350_1209331523300010880Boreal Forest SoilSESQMKEAMLYAMNHPPGIQNSEPITIKFFKKEACDNPTPMGYNCRFDIQVASANIGASMYNNIPMGFFYVDKETGKWAMRPPF*
Ga0137404_1000693553300012929Vadose Zone SoilMKEAALYAINHPPGITISDPISIKFFKKEACDNPTPKGYNCSFDWQVASANLGASMYNNISSAFFYKDKESGKWAMRPPF*
Ga0182018_1001933423300014489PalsaMKEAAPYAMNHPPGETVPAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASVYNDMPSAWFYQDKESGKWAMRLPF*
Ga0182018_1005194933300014489PalsaMKDAMEYAMNHPPGVVNSEPIKITFFKKEACDKPAEQGFRCTFTVMVASANIGAGMYNNISMGYFYKDKDSGKWMMRPPF*
Ga0182018_1013759413300014489PalsaMKEAALYAINHPPGMTNSEPITIKFFKKEACENPTPKGYSCSFDWQVASANIGASMYNNISNAFFYKDKDSGKWAMRPPF*
Ga0182018_1030412413300014489PalsaNEAQMREAMLYMVNHPPGMVNSDPITIKFFKKEACDKPPTAQGFHCTFDVQVASRNIGASMYNNIRSGDFYKDDSGKWAMRPPF*
Ga0182015_1036780223300014495PalsaAQMKEAALYAINHPPGMTNSDPITIKFFKKEACENPTPKGYNCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF*
Ga0182015_1080012313300014495PalsaMPGNPKIKRRAALNHPPGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF*
Ga0182015_1091940923300014495PalsaTFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMYNNLNSGEFYKDKDSGKWMMRPPPF*
Ga0182024_10020918123300014501PermafrostMKDAMLYAINHPPGEPAGDPITITFFKKEACDTPTPKGYNCSFDVKVASTNIGASMYNNIPGAWFYKDKDSGKWMMRPPF*
Ga0182024_1172235723300014501PermafrostAMNHPPGITNSDPITIKFFKKEACDNPTPMGYNCRFEVQVASANIGASMYNNVPMAFFYVDKESGKWAMRPPF*
Ga0182030_1009543433300014838BogMKDAMLYAMNHPPGIVNSDPITIKFFKKEACESPTPMGFNCHFDVQVASANIGASMYNNIPMAFFYFDKASGQWAMRPPF*
Ga0182030_1009863723300014838BogMKEAMLYAMNHPPGIQNSEPITIKFFKKEACENPTPMGYNCRFDVQVASANIGASMYNNIPGAFFYFDKESGKWAMRPPF*
Ga0182030_1025352323300014838BogFKKEACDEPTPQGFRCTFEVKVASRNIGASMYNNIPFAEFYKDKDSGKWAMRPPF*
Ga0182030_1027300613300014838BogNSDPITIKFFKKEACDNPTPMGYNCRFEVQVASANIGASMYNNIPMAFFYVDKESGKWAMRPPF*
Ga0167639_101004723300015080Glacier Forefield SoilMKEAMLYAMNHPPGETVGDPITITFFKKEACDAPTPKGYNCSFDVKVASANIGASMYNNIPGAWFYQDKDSGKWAMRPPF*
Ga0137412_1043511623300015242Vadose Zone SoilMDDAMNHPPGETVGDPIKITFFKKEACDNPTPQGFRCTFDVKVASRNIGASMYNNISFGEFYKDKETGRWTMRPPF*
Ga0187812_102384013300017821Freshwater SedimentEPSEAQMKAAMLDEMNHPPGYTVTEPVSITFFKKGACDRPTPQGFNCTFTVKVASTNIAAGMYMNIPMAVFYKESGKWMMRPPF
Ga0187808_1020725213300017942Freshwater SedimentKAAMLDEMNHPPGYTVTEPVSITFFKKGACDKPTPQGFNCTFTVKVASTNIAAGMYNNIPTGVFYQESGKWMMRPPF
Ga0187804_1022170713300018006Freshwater SedimentPIKIVFFKKEACDDPTPQGFRCTFDVKVTSRNIGASMYNNISFGVFYKDKDSGKWMMRPP
Ga0187883_1066592423300018037PeatlandVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMYNNVTSGEFYKDKDSGKWMMRPLPY
Ga0187871_1002745353300018042PeatlandVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0187887_1082340413300018043PeatlandEAMLYAMNHPPGITNSDPINIKFFKKEACDKPTPKGYNCSFDVQVTSANIGASMYNNISSAFFYMDKDSGKWAMRPPF
Ga0187859_1011505933300018047PeatlandVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVASANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0187859_1072572313300018047PeatlandMKEAMLYAMNHPPGETVSDPIKITFFKKEACDNPTPKGYNCSFDVKVASANIAASFYNDISSAFFYVDKESGKWAMRPPF
Ga0182025_102568123300019786PermafrostEPSEAQMKEAMEYAINHPPGITVTEPGKITFFKKEACDAPTPQGYGCTFTVQVSSTNIGMSMYNNVPKAFFYKDKDSGKWAMRPPF
Ga0210403_1085481913300020580SoilGMTNSDPITIKFFKKEACDNPTPQGYNCRFDWQVASANIGASMYNNISSSFFYKDKDSGKWAMRPPF
Ga0210399_1017634033300020581SoilKITFFKKEACDNPTPQGYRCTFEVKVASANLGASMYNNIPFGEFYKDKDSGKWRMRPPF
Ga0210395_1000134973300020582SoilMKDAMLYAMNHPPGDPVGAPITIKFFKKEACDNPTPQGYNCTFDVKVESTNLGASMYNNIPGGVFYVDKSTGKWNMRPPF
Ga0210404_1091356923300021088SoilGDPVTITFFKKEACDTPTPKGYNCSFDVKVASTNIGASMYNNIPGAWFYKDKDSGKWMMRPPF
Ga0210408_1039020513300021178SoilPGMTNSDPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSAYFYFDKSSGKWAMRPPF
Ga0210388_1115428523300021181SoilDPIEIKFFKKEACDKPTPQGFRCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0210388_1116323823300021181SoilAALFAINHPPGVTDSDPITIKFFKKEACDNPTPQGYGCRFDWQVASANIGASMYNNISSSFFYQDKNSGKWAMRPPF
Ga0210388_1118758413300021181SoilMNHPPGVAVSDPVTIKFFKKEACDPPTAQGFRCTFDVQVASANIGASMYNNVPFAFFYKESGKWNMRPPF
Ga0210385_1033204323300021402SoilMKEAMLYAMNHPPGEAAGDPITITFFKKEACDSPTPKGYNCTFDVKVASTNIGASIYNDIPGAWFYVDKDTGKWAMRPPF
Ga0210389_1052272913300021404SoilETQMREAALFAINHPPGMTNSDPITIKFFKKEACDNPTPQGYNCRFDWQVASANIGASMYNNISSSFFYKDKDSGKWAMRPPF
Ga0210386_1085515213300021406SoilGAAEPTEAQMKDAMLYAMNHPPGEEAGAPITIKFFKKEACDNPTPQGYNCTFDVKVESTNIGASVYNNIPGGVFYVDKTTGKWNMRPI
Ga0210383_1047973613300021407SoilLYAMNHPPGMTNSDPITIKFFKKEACDKPTPQGYNCTFEVQVASANIGASMYNNIPGAFFYFDKASGKWAMRPPF
Ga0210383_1058541113300021407SoilLFEMNHPPGVTNSDPITIKFFKKEACDPATAQGFRCTFDVQVASANIGASMYNNVPFAFFYKDGGKWAMRPPF
Ga0210383_1171816523300021407SoilNSAPITIKFFKKEACDAKPTAQGFHCTFDIQVASANIGASMYNNISMGEFYLDKEIGKWNMRPPF
Ga0210384_1134131323300021432SoilHPPGITNSEPVTIKFFKKEACDKPNEQGYRCTFEVQVASANIGAGMYNNIPFAVFYVDKDRGGKWNMRPPF
Ga0210391_1029306713300021433SoilDPVTIKFFKKEACDPPTAQGFRCTFDVQVASANIGASMYNNVPFAFFYKESGKWNMRPPF
Ga0210391_1062345033300021433SoilEAAGDPITITFFKKEACDSPTPKGYNCTFDVKVASTNIGASIYNDIPGAWFYVDKDTGKWAMRPPF
Ga0210391_1151711923300021433SoilPPGMTNSDPITIKFFKKEACDSPTPQGYNCRFDWQVASANIGASMYNNIPFAVFYVDKDRGGKWNMRPPF
Ga0210392_1048383213300021475SoilPPGMTNSDPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSAYFYFDKSSGKWAMRPPF
Ga0210398_1002418613300021477SoilPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0210410_1122553023300021479SoilHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0210409_1028032723300021559SoilNSDPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSAYFYFDKSSGKWAMRPPF
Ga0212123_1085640823300022557Iron-Sulfur Acid SpringPPGINVSDPVKITFFKKGACDNPTPQGYNCTFTVMVASANIGASMYNNVPTGVFYKDKDSGKWMMRPPF
Ga0224551_104415013300023259SoilNPKIKRRAALNHPPGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0224551_108274213300023259SoilFKKEACDEPTKQGYSCTFTVQVSSANIGMSMYNNIPKGVFYKDKDSGKWMMRPPF
Ga0208220_116476813300025627Arctic Peat SoilEPGKITFFKKEACDEPTKQGYDCTFTVQVSSTNIGMSMYNNIPKGVFYKDKDSGKWMMRPPF
Ga0207693_1110384523300025915Corn, Switchgrass And Miscanthus RhizosphereMWPATVLTLGLKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0207663_1036271623300025916Corn, Switchgrass And Miscanthus RhizosphereASAAEPSESEMKDAMLYAMNHPPDVTVTDPVTIKSFKKEACDEPTPQGYRCTFDVLVASANLGASMYNNVPFAWFYKDKKSGKWVMRPPF
Ga0209010_101280733300027370Forest SoilVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMYNNVTSGDFYKDKDSGKWMMRPPF
Ga0208987_104802923300027496Forest SoilKFFKKEACDKPTPQGYNCTFEVQVASANIGASMYNNIPGAFFYVDKTSGKWAMRPPF
Ga0209419_105936513300027537Forest SoilSESEMRDAMLNAMNHAPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0209116_108076833300027590Forest SoilCNETSPFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPP
Ga0209329_107349023300027605Forest SoilVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0209221_102052043300027609Forest SoilVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVAPANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0209221_112545523300027609Forest SoilLCNETSPFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0209038_1011009523300027737Bog Forest SoilPAGDPIKITFFQKEACDAPTPQGYKCTFTVKVASANIGASMYNNIPFGEFYKDKESGKWKMRPPF
Ga0209448_1000366223300027783Bog Forest SoilMNHPPGETVGDPIKIVFFKKEACDNPTPQGFRCTFDVKVASRNIGASMYNNISFAVFYKDKESGKWMMRPPF
Ga0209580_1011685733300027842Surface SoilVEALDLNPAMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNLGASMYNNIPFGEFYKDKETGKWMMRPPF
Ga0209580_1043659913300027842Surface SoilAEMRNAMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFRCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0209274_1034690013300027853SoilKDAMLFAMNHPPGVVNAAPIKIDFFKKEACDKPTPQGFNCTFTVKVSSSNIGASMYNNIPNGNFYKDKDSGNWAMRPPF
Ga0209169_1016866513300027879SoilPPGVTVSDPVTIKFFKKEACDKPTPQGYNCTFDVQVASANIGASMYNNIPGAVFYKDKDSGKWAMRPPF
Ga0209380_1018678323300027889SoilMKEAMLYAMNHPPGEPAGDPITITFFKKEACDNPTPKGYNCTFDVKVASTNIGASIYNDIPGAWFYQDKDTGKWAMRPPF
Ga0209380_1047519713300027889SoilMNHPPGETVSDPIEIKFFKKEACDKPTPQGFRCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0209006_1012909313300027908Forest SoilEPSETQMKEAALYAINHPPGITNSEPITIKFFKKEACDNPTPKGYSCSFDWQVASANIGASMYNNISNAFFYKDKDSGKWATRPPF
Ga0209006_1053207533300027908Forest SoilKKEACDKPTEQGFRCTFTVMVASANIGAGMYNNISMGYFYKDKDSGKWMMRPPF
Ga0302301_100168443300028731PalsaMFSPKRMPGNPKIKRRAALNHPPGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0302267_1024847013300028745BogKDAMLYAMNHPPGIVNSDPITIKFFKKEACESPTPMGFNCHFDVQVASANIGASMYNNIPMAFFYFDKASGQWAMRPPF
Ga0302233_1004901543300028746PalsaKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVASANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0302219_1001857213300028747PalsaATAQEPSEAQMKEAALYAINHPPGMTNSDPITIKFFKKEACENPTPKGYNCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF
Ga0302219_1039728113300028747PalsaGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0302224_1008744213300028759PalsaEPSEAQMKDAMEYAINHPPGITVTEPGKITFFKKEACDAPTPQGYGCTFTVQVSSTNIGMSMYNNIPKAFFYKDKDSGKWAMRPPF
Ga0302234_1015933223300028773PalsaKEAALYAINHPPGMTNSDPITIKFFKKEACENPTPKGYNCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF
Ga0302231_1048276323300028775PalsaVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKD
Ga0302227_1007243313300028795PalsaNSDPIKITFFKKEACDNPTPQGFHCTFTVTVASANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0302222_1001203083300028798PalsaGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMYNNVTSGDFYKDKDSGKWMMRPPF
Ga0302222_1023981723300028798PalsaGSEPSEDQMKDAMLFAMNHPPGVENVAPIRIDFFKKEACNAPTPQGFNCTFEVRVSSTNIGASMYNNIPSANFYKDKETGKWAMRPPF
Ga0302222_1038874813300028798PalsaEAQMKDAMEYAINHPPGITVTEPGKITFFKKEACDAPTPQGYGCTFTVQVSSTNIGMSMYNNIPKAFFYKDKDSGKWAMRPPF
Ga0265338_1060391123300028800RhizosphereKITFFKKEACDNPTPQGYNCTFEVTVASANIGASMYNNVPKAWFYKDKDSGKWAMRPPF
Ga0247275_103691523300029817SoilIKFFKKEACNKPPTAQGFHCTFEVQVASPNIGASMYNNITFGDFYKDDSGKWAMRPPF
Ga0311368_10004607173300029882PalsaKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0311340_1097544123300029943PalsaMKDAMLEAMNHPPGEKVSDPVTITFFKKEACDNPTPQGFDCTFTVKVASRNIGASMYNNIPKGVFYKDKESGKWMMRPPF
Ga0311340_1136570623300029943PalsaTVSDPVTIKFFKKEACDKPTPQGYNCTFDVQVASANIGASMYNNIPGAVFYKDKDSGKWAMRPPF
Ga0311352_1016869913300029944PalsaAMNHPPGETVTAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASIYNNMPSAWFYQDKESGKWAMRLPF
Ga0311352_1148512223300029944PalsaPSEDQMKDAMLFAMNHPPGVENVAPIRIDFFKKEACNAPTPQGFNCTFEVRVSSTNIGASMYNNIPSANFYKDKETGKWAMRPPF
Ga0311371_1073053813300029951PalsaPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPP
Ga0311339_1191177623300029999PalsaFKKEACDAPTPQGYGCTFTVQVSSTNIGMSMYNNIPKAFFYKDKDSGKWAMRPPF
Ga0302177_1005008333300030053PalsaNSDPITIKFFKKEACENPTPKGYNCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF
Ga0302177_1068921923300030053PalsaVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMYNNVTSGEFYKDKDSGKWMMRPPF
Ga0302179_1043375013300030058PalsaGETVTAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASIYNNMPSAWFYQDKESGKWAMRLPF
Ga0311357_1025327643300030524PalsaATFKKEACDKPTPQGYNCTFVMTVSSANAFAQMFNNLPAANFYKDKDSGKWMMRPPF
Ga0311357_1162682213300030524PalsaNHPPGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0311356_1003038783300030617PalsaKEACDNPTPQGFHCTFTVTVASANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0265753_108065223300030862SoilIKFFKKEACDAPTPQGFKCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0170824_11915230823300031231Forest SoilMTNSDPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSTYFYFDRSSDKWAMRPPF
Ga0302325_1058336313300031234PalsaHCTGDRNLRLRRGTDAMNHPPGETVPAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASVYNDMPSAWFYQDKESGKWAMRLPF
Ga0302325_1242889213300031234PalsaGEKVSDPVTITFFKKEACDNPTPQGFDCTFTVKVASRNIGASMYNNIPKGVFYKDKESGKWMMRPPF
Ga0302324_10008407253300031236PalsaLRLRRGTDAMNHPPGETVPAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASVYNDMPSAWFYQDKESGKWAMRLPF
Ga0302324_10123877513300031236PalsaPPGMVNSDPITIKFFKKEACNKPPTAQGFHCTFDVQVASRNIGASMYNNITSGDFYKDDSGKWDMRPPF
Ga0302324_10155804223300031236PalsaPPGMVNSDPITIKFFKKEACNKPPTAQGFHCTFDVQVASRNIGASMYNNISSGDFYKDDSGKWAMRPPF
Ga0302324_10197750723300031236PalsaTIKFFKKEACDKPTGQGYRCTFDVQVASANLGASMYNNIPFANFYKDDSGKWQMRPPF
Ga0170820_1043685413300031446Forest SoilPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSTYFYFDRSSDKWAMRPP
Ga0170818_10819869213300031474Forest SoilGGRTVCHQSPPGMTNSDPISIKFFKKEACDKPTPQGYSCTFDWQVASANLGASMYNNIPSTYFYFDRSSDKWAMRRPF
Ga0302326_10003986243300031525PalsaMNHPPGETVPAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASVYNDMPSAWFYQDKESGKWAMRLPF
Ga0302326_1285744723300031525PalsaNSDPITIKFFKKEACDNPTPMGYNCRFEVQVASANIGASMYNNVPMAFFYVDKESGKWAMRPPF
Ga0265313_1002565023300031595RhizosphereMKDAMLYAMNHPPGVSNSEPIKITFFKKEACDNPTPQGYNCTFEVTVASANIGASMYNNVPKAWFYKDKDSGKWAMRPPF
Ga0310686_11130020033300031708SoilEMNHPTGVTNSEPITIKSFKKEACDKPTPQGYRCTFEVNVASTNIGAGMYNNVPFAMFYKDKDSGKWMMRPPF
Ga0310686_11444354613300031708SoilPIKITFFKKEACDKPAEQGFRCTFTVMVASANIGAGMYNNISMGYFYKDKDSGKWAMRPP
Ga0307469_1004030043300031720Hardwood Forest SoilMLNAMNHPPGETVSDPIEIKFFKKEACDKPTPQGFKCTFDVKVASRNIGASMYNNIPFGEFYKDKESGKWMMRPPL
Ga0307468_10152287413300031740Hardwood Forest SoilMTNSDPIFFKKEACDKPTPQGYSCTFNWQVASANLGASMYNNIPSAYFYFDKSSGKWAMRPPF
Ga0307471_10221810123300032180Hardwood Forest SoilEIKFFKKEACDKPTPQGFRCTFDVKVASRNLGASMYNNIPFGEFYKDKESGKWMMRPPF
Ga0335085_1106470223300032770SoilMNHPPGVTVSDPVTIKFFKKEACDKPQTAQGFHCTFDVQVASSIIGASMYNNISFGDFYKDGSGKWAMRPPF
Ga0334854_025685_4_2463300033829SoilMKEAMLYAINHPPGEPAGDPITITFFKKEACDNPTPKGYNRTFDVKVASTNIGASIYNDIPGAWFYQDKDTGKWAMRPPF
Ga0370515_0358647_234_4883300034163Untreated Peat SoilMPGNPKIKRRAALNHPPGVKNSDPIKITFFKKEACDNPTPQGFHCTFTVTVTSANAFAQMFNNVTSGEFYKDKDSGKWMMRPPF
Ga0370514_129212_10_2283300034199Untreated Peat SoilMNHPPGETVTAPITIAFFKKEACDNPTPLGYNCLFDIKVASTNIGASIYNNMPSAWFYQDKESGKWAMRLPF
Ga0370514_201405_16_2163300034199Untreated Peat SoilMTNSDPITIKFFKKEACENPTPKGYNCSFDWQVASANIGASMYNNISSAFFYKDKDSGKWAMRPPF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.