NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045971

Metagenome / Metatranscriptome Family F045971

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045971
Family Type Metagenome / Metatranscriptome
Number of Sequences 152
Average Sequence Length 45 residues
Representative Sequence VREQLLHIIEPISGAVSIVSYEAVSDSKGKVQSYKVLAKRD
Number of Associated Samples 133
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.67 %
% of genes near scaffold ends (potentially truncated) 96.05 %
% of genes from short scaffolds (< 2000 bps) 78.95 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.395 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.500 % of family members)
Environment Ontology (ENVO) Unclassified
(23.026 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.553 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.
1JGI1027J12803_1003107172
2JGI12664J13189_10003076
3JGIcombinedJ26739_1001859591
4JGIcombinedJ26739_1005434302
5JGIcombinedJ26739_1011441351
6Ga0063454_1014132362
7Ga0062389_1013574312
8Ga0058897_104864561
9Ga0066672_109219252
10Ga0066683_104265371
11Ga0066688_101921033
12Ga0070680_1007916812
13Ga0073909_102769141
14Ga0070733_100544064
15Ga0066703_109134503
16Ga0070764_101058213
17Ga0066903_1036807502
18Ga0075289_10024891
19Ga0075285_10011461
20Ga0075029_1000014651
21Ga0075029_1001714311
22Ga0075017_1016317242
23Ga0075019_105314672
24Ga0075015_1000592414
25Ga0075030_1004488171
26Ga0070716_1001434584
27Ga0075426_107710532
28Ga0116105_11925742
29Ga0116113_11941531
30Ga0116122_11789482
31Ga0116130_11504622
32Ga0116219_102249271
33Ga0116223_104399231
34Ga0126373_102577114
35Ga0099796_100656491
36Ga0074046_108520302
37Ga0126376_115748221
38Ga0126372_116687571
39Ga0126378_113987841
40Ga0126381_1031102611
41Ga0126383_101410261
42Ga0126383_126023482
43Ga0137393_107497292
44Ga0137385_113975311
45Ga0164299_111303371
46Ga0181523_100056001
47Ga0181525_102282811
48Ga0181522_100253234
49Ga0181522_103677871
50Ga0181519_100002151
51Ga0132255_1027151071
52Ga0182041_121264411
53Ga0182037_112877451
54Ga0187818_100888103
55Ga0187819_102580112
56Ga0187817_104757991
57Ga0187779_101031124
58Ga0187778_100135484
59Ga0187783_101814331
60Ga0187781_112690092
61Ga0187782_100222284
62Ga0187863_102943891
63Ga0187855_100586491
64Ga0187855_101096831
65Ga0187890_104331871
66Ga0187858_105707271
67Ga0187771_100724504
68Ga0187771_101662051
69Ga0187770_117696732
70Ga0210407_111847432
71Ga0210399_106167991
72Ga0210399_112665711
73Ga0210395_105919712
74Ga0210405_101671174
75Ga0210396_100803161
76Ga0210396_115487731
77Ga0210388_101539711
78Ga0210388_102675631
79Ga0210388_107031241
80Ga0210388_114916501
81Ga0210385_100711391
82Ga0210397_101377421
83Ga0210383_103115471
84Ga0187846_101376221
85Ga0210402_104560401
86Ga0210409_112029942
87Ga0126371_101504284
88Ga0126371_113804272
89Ga0224546_10070602
90Ga0212123_105357052
91Ga0212123_107555172
92Ga0242661_10017541
93Ga0208936_10555211
94Ga0208937_10483341
95Ga0207660_102984601
96Ga0207700_108262141
97Ga0208775_10012494
98Ga0209804_10749951
99Ga0207779_10077171
100Ga0209730_10284672
101Ga0209524_10267391
102Ga0209419_11251721
103Ga0209735_10004775
104Ga0209116_11509811
105Ga0208827_10601023
106Ga0209736_10724921
107Ga0209626_11618631
108Ga0208696_10005891
109Ga0209448_100458644
110Ga0209811_103618382
111Ga0209773_104200381
112Ga0209580_101165021
113Ga0209580_106055221
114Ga0209465_103339712
115Ga0209465_106345052
116Ga0209169_100216204
117Ga0209169_107436981
118Ga0209488_100424511
119Ga0302225_102891902
120Ga0302222_100443934
121Ga0302226_103919612
122Ga0302230_101602531
123Ga0302197_103621342
124Ga0311359_105861291
125Ga0302141_11412441
126Ga0302176_103645541
127Ga0302183_101466942
128Ga0311357_106609782
129Ga0311356_110900842
130Ga0310039_100015701
131Ga0302310_103584982
132Ga0302311_100370484
133Ga0265460_100021474
134Ga0265459_112243492
135Ga0302308_106632292
136Ga0265760_103670342
137Ga0302324_1002077164
138Ga0265340_100704134
139Ga0302326_115332691
140Ga0310686_1058556482
141Ga0307475_101020361
142Ga0306921_125744251
143Ga0311301_100544681
144Ga0307470_112959302
145Ga0335079_101337414
146Ga0335078_126366421
147Ga0335080_106417903
148Ga0335080_111763852
149Ga0326727_100973201
150Ga0326727_111480141
151Ga0316212_10087063
152Ga0370514_108141_27_185
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.39%    β-sheet: 28.99%    Coil/Unstructured: 53.62%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540VREQLLHIIEPISGAVSIVSYEAVSDSKGKVQSYKVLAKRDSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
95.4%4.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Rice Paddy Soil
Tropical Peatland
Bog Forest Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Soil
Palsa
Bog
Peat Soil
Biofilm
Arabidopsis Rhizosphere
Roots
Populus Rhizosphere
Rhizosphere
3.3%3.3%3.9%3.9%5.9%3.3%3.9%3.9%12.5%5.3%7.9%8.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10031071723300000955SoilEQLLYIIEPISGAVSISSYEAVSDHQGKIQSYRVVANRE*
JGI12664J13189_100030763300001082Forest SoilQLLHVIEPISGHVSIVSYEAVMDHGSHVQSYKVLVQRQ*
JGIcombinedJ26739_10018595913300002245Forest SoilDSAVRAQLLHMIEPISGHVSIVSYETVADRGGHVQGYKVLVQRQ*
JGIcombinedJ26739_10054343023300002245Forest SoilGDDRSVREQLLRIIKPISGEVSIVSYDAVTDSKGHVRTYKVLVKR*
JGIcombinedJ26739_10114413513300002245Forest SoilAGDDSAVRAQLLHVIEPISGHVSIVSYEAVMDHGSHVQSYKVLVQRQ*
Ga0063454_10141323623300004081SoilAVSAGDERSVREQLLRIIEPISGAVSITSYEAVSDSKGKLQSYKVVATRE*
Ga0062389_10135743123300004092Bog Forest SoilGDDSSVRDQLLRIIEPISGAVSIVSYETVSDGKGKAQSYKVLAKRD*
Ga0058897_1048645613300004139Forest SoilAVTSGDDRSVREQLLYIIEPISGAVSIISYEPVSDHKGKVQSYRVVARRE*
Ga0066672_1092192523300005167SoilKPGDDQSMRDQLLRIIKPISGDVTIVHYEPVADGKGHVQTYRVLVKR*
Ga0066683_1042653713300005172SoilGGLLYQIEAAAIRPGDDLSVRDQLLHIIEPISGDVSLVRYETVPDKKGRVEVYRVWVHRE
Ga0066688_1019210333300005178SoilEQLLRIIEPISGAVSIVKYEPVTDSQGHVQTYRVVVKRE*
Ga0070680_10079168123300005336Corn RhizosphereDDPAVRDQLLHIIEPIAGAVSIVSYEAVSDRKGQVQSYKVLAQRE*
Ga0073909_1027691413300005526Surface SoilDQLLHIIEPISGAVSIVSYETVSDSHGRVQSYRVLAKRE*
Ga0070733_1005440643300005541Surface SoilGDDRSVREQLLRIIEPISGAVSIVSYEAIADGKGQVQSYKVQAKRD*
Ga0066703_1091345033300005568SoilQLLRIIEPISGAVSIVSYETVLDRKGQVQSYKVLAKRD*
Ga0070764_1010582133300005712SoilYQIEASAVSPGDDGSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQRQ*
Ga0066903_10368075023300005764Tropical Forest SoilHSVRDQLLHIIEPISGAVSIVSYEAVSDGKGKIQSYKVLATRE*
Ga0075289_100248913300005888Rice Paddy SoilGDGTVRDQLLHIIEPISGAVSIESYEAVSDRTGNVQSYKVFAQRE*
Ga0075285_100114613300005890Rice Paddy SoilPGDGTVRDQLLHIIEPISGAVSIESYEAVSDRTGNVQSYKVFAQRE*
Ga0075029_10000146513300006052WatershedsRIIEPISGAVSIVRYDPVYEKGKLQSYKVLVTRE*
Ga0075029_10017143113300006052WatershedsLRIIEPISGAVSIVSYETVTDRKGHVQSYKVMVRRE*
Ga0075017_10163172423300006059WatershedsQSVREQLLRIIEPISGAVSIVSYETVSDSKGKVQGYKVLAKRD*
Ga0075019_1053146723300006086WatershedsGDDRSVREQLLHIIEPISGAVSIVSYEAVSDHKGTVQSYRVVAKRE*
Ga0075015_10005924143300006102WatershedsHAVRDQLLGIIEPISGAVSIVRYDPVYEKGKLQSYKVLVTRE*
Ga0075030_10044881713300006162WatershedsQLLRIIEPISGAVSIVSYETVTDRKGHVQSYRVLVRRE*
Ga0070716_10014345843300006173Corn, Switchgrass And Miscanthus RhizosphereLHIIEPIAGAVSIVSYEAVSDHKGKVQSYKVLAERE*
Ga0075426_1077105323300006903Populus RhizosphereIIEPISGAVSIVSYEAVADHKGKVQSYKVLARRE*
Ga0116105_119257423300009624PeatlandGAITPGDDASVREQLLRIIRPISGDVAIVSYEVVGKGHTQTYRVLVKR*
Ga0116113_119415313300009638PeatlandAGLSPGDDGSVRDQLLKIIEPISGAVSIVKYEAVSDRTGKIQSYRVWVKRE*
Ga0116122_117894823300009639PeatlandISPGDDHSVREQLRRIIEPISGAVAIVSYEAVSDDKGRVQRYKVVVKRE*
Ga0116130_115046223300009762PeatlandEQLLHIIEPISGAVSIVSYETVSDHNGRVQSYKVLAKRD*
Ga0116219_1022492713300009824Peatlands SoilIIEPISGAVSIVKYEGVSDPKGHVQEYRVWAKRK*
Ga0116223_1043992313300009839Peatlands SoilLRRIIEPISGAVAIVSYEPVSDRKGQVQSYKVVVKRE*
Ga0126373_1025771143300010048Tropical Forest SoilDQSVREQLLAIIEPISGAVSIVKWESVTDRHGHVQSYRVVVQRE*
Ga0099796_1006564913300010159Vadose Zone SoilYQIDGSVIAPGDDRAVRQQLLRIIEPISGGVSIVQYESVADGKGHVQSYKVLVQRE*
Ga0074046_1085203023300010339Bog Forest SoilDDGSLRDQLLKIIEPISGAVSIVKIDVVSDRKGKVQSYRVWVKRE*
Ga0126376_1157482213300010359Tropical Forest SoilIIEPISGAVSIVSYEPVKDTKGKVQSYRVLARRD*
Ga0126372_1166875713300010360Tropical Forest SoilIIEPISGAVSIIKYETLLDHKGKLQGYRVLATRE*
Ga0126378_1139878413300010361Tropical Forest SoilPGDDRTVREQLLRIIEPISGAVSILKVDVVNDRKGHVQSYKVQVERD*
Ga0126381_10311026113300010376Tropical Forest SoilAVTLGDDESVRDQLLHIIEPIAGAVSIVSYEPVSDRKGNVQTYKVLAKRE*
Ga0126383_1014102613300010398Tropical Forest SoilQLLHIIEPISGAVSIVSYEKVSDHKGKLQGYRVVATRE*
Ga0126383_1260234823300010398Tropical Forest SoilQLLHIIEPIAGAVSIVSYEPVSDRKGNVQTYKVLAKRE*
Ga0137393_1074972923300011271Vadose Zone SoilFSIRSGLLRIIEPISGGVSIKRYEALKDKKGNVVGYRVWAQRE*
Ga0137385_1139753113300012359Vadose Zone SoilEQLLRIIEPISGAVTIVSYEPVSDNKGKIQSYKVLAKRE*
Ga0164299_1113033713300012958SoilHIIEPISGAVSIVSYEPVSDSKGKLQSYKVLANRE*
Ga0181523_1000560013300014165BogSVREQLLRIIEPISGAVSIVSYETVSDRKGQVQGYKVLAKRD*
Ga0181525_1022828113300014654BogRIIEPISGAVSIVSYETISDAKGQLQSYKVLAKRD*
Ga0181522_1002532343300014657BogPGDDRSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQR*
Ga0181522_1036778713300014657BogEAGAISPGDDHSVREQLLKIIEPISGGVSIVQYDTVKDGKGRVQSYKVLVQRE*
Ga0181519_1000021513300014658BogPGEDSAIRGELLHIIEPISGAVTIVKYEAVSNPKGKVQSYRVWVKRQ*
Ga0132255_10271510713300015374Arabidopsis RhizosphereDDGAMRDQLLHIIEPISGAVSIVSYETVADSHGKVQSYRVLAKRE*
Ga0182041_1212644113300016294SoilDQSVRDQLLHIIEPISGAVSIVSYEPVKDLKGKVQSYKVLAKRD
Ga0182037_1128774513300016404SoilQLLRIIEPISGAVSIISYEAVSDRKGKLQGYRVVARRE
Ga0187818_1008881033300017823Freshwater SedimentSAVTPGDDATVRDQLLHIIEPISGAVSIVSYEAVSDHKGKVQSYKVLAKRE
Ga0187819_1025801123300017943Freshwater SedimentDRSLRQQLLRIIEPISGAVSIVSYEAVTDHKGHVQSYKVTVQRE
Ga0187817_1047579913300017955Freshwater SedimentEQLLHIIEPISGAVSIVSYEAVSDHKGKVQSYRVVAKRE
Ga0187779_1010311243300017959Tropical PeatlandDDPSVREQLLRIIEPISGAVSIVSYEAVSDQKGKLQGYKVLAKRE
Ga0187778_1001354843300017961Tropical PeatlandLHIIEPISGAVTIMSYNAVADHKGNVQSYKVVARRE
Ga0187783_1018143313300017970Tropical PeatlandNAVTAGDDQSVRDQLLHIIEPIAGAVSIVSYEPVSDPKGKVQTYKVLAKRE
Ga0187781_1126900923300017972Tropical PeatlandLRIIEPISGAVSIVGYEAVTDSKGRLQGYRVTAKRE
Ga0187782_1002222843300017975Tropical PeatlandDDHSVREQLLRIIEPISGAVSIVRYDPVTDRKGQVQSYKVRVKRE
Ga0187863_1029438913300018034PeatlandYEISARTVSPGDEGSVRDQLLRIIEPISGTVSIVKCEAVSNKKGTVESYRVWVKRE
Ga0187855_1005864913300018038PeatlandSVREQLLRIIEPISGAVSIVSYEQISGPKGQVQSYKVLAKRD
Ga0187855_1010968313300018038PeatlandGTLRGQLLSVIEPISGAVSIERFEAVPDHDGKIQSYRVWVKRK
Ga0187890_1043318713300018044PeatlandQGRLLYQIEASAVSPGDDGSVRDQLLKIIEPISGGVTIVQYDAVKDGRGRVQSYKVLVQR
Ga0187858_1057072713300018057PeatlandEQLRRIIEPISGAVAIVSYEAVSDDKGRVQRYKVVVKRE
Ga0187771_1007245043300018088Tropical PeatlandLRIIEPISGAVSIVKYDPVTDRKGQVQSYKVLVKRE
Ga0187771_1016620513300018088Tropical PeatlandSDISPGDDHAVREQLLQIIEPISGAVSILSYEPVSDRKGKVRSYKVLVKRE
Ga0187770_1176967323300018090Tropical PeatlandEQLLRIIEPIPGAVSIVNYEADADGKGKVQSYKVLVKRE
Ga0210407_1118474323300020579SoilEQLLHIIEPISGAVSIVSFETVADGKGKAQSYKVLAKRD
Ga0210399_1061679913300020581SoilLDTIEPISGAVSIISYEPVSDHKGKVQSYRVVARRE
Ga0210399_1126657113300020581SoilMITPGDDQSVRDQLLRVIKPISGDVMIVKYEPVADGKGHVQTYKVLVKR
Ga0210395_1059197123300020582SoilEASAVSPGDDGSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQRQ
Ga0210405_1016711743300021171SoilVREQLLQIIEPISGAVSIVSYEAVSDGKGHVQSYKVLAKRD
Ga0210396_1008031613300021180SoilSPGDDQAVREQLLRIIEPISGAVSIVSYETVSDHKGQIQSYKVLAKRD
Ga0210396_1154877313300021180SoilQLLQIIEPISGAVSIVSFETVADGKGKAQSYKVLAKRD
Ga0210388_1015397113300021181SoilRLLYQIEASAVSPGDDGSVRDQLLKIIEPISGGVSILQYDAVKDGKGRVQSYKVLVQRQ
Ga0210388_1026756313300021181SoilSAVSPGDDGSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQRQ
Ga0210388_1070312413300021181SoilQAVREQLLRIIEPISGAVSIVSYESVSKGNVQSYKVVVRRD
Ga0210388_1149165013300021181SoilSPGDEGSVRAQLLRVIEPISGAVSIVRYEGVCDQKGKVQSYRVWVKRE
Ga0210385_1007113913300021402SoilQLLRIIEPISGAVSIVSYETVSDHKGQLQSYKVLAKRD
Ga0210397_1013774213300021403SoilLLQIIEPISGAVSIVSYETVADGKGKVQGYKVLARRD
Ga0210383_1031154713300021407SoilVSPNDGPVQDQLLRIIEPISGAISIVSYDAVSDSHGKVQSYKVVAKRE
Ga0187846_1013762213300021476BiofilmVVGGNQSTKDQLLHIIEPISGAVSIISYETVSDSKGKMQSYKVLAKRE
Ga0210402_1045604013300021478SoilAVTPGDDRTTRDQLLRIIEPISGAVSIVSYEMVADGKGKVQSYKVLAKRE
Ga0210409_1120299423300021559SoilVAVAPGDDNVVRDELLHIIEPISGGVSIVKYESAADRKGKIQSYKVWVKREK
Ga0126371_1015042843300021560Tropical Forest SoilSAVTASDDSSVREQLLRIIEPISGAVSIISYEKVSDNKGKLQGYKVVATRE
Ga0126371_1138042723300021560Tropical Forest SoilVTPGNDSAVREQLLRIIEPISGAVSIVSYETLTDRKGNVQSYKVLAKRE
Ga0224546_100706023300022515SoilYEISGAWISPGDEASVREQLLRVIEPISGGVSIVRYDAVSDPKGKVQSYRVWVKRK
Ga0212123_1053570523300022557Iron-Sulfur Acid SpringGDDQSVREQLLHIIEPISGAVSIVSYEPVSDNKGKLQSYKVLARRE
Ga0212123_1075551723300022557Iron-Sulfur Acid SpringGEDQAVRDQLLLIIEPISGAVSIVSYEPVKDGKGKIQSYKVLAQRE
Ga0242661_100175413300022717SoilVTPGDDRSVREQLLYIIEPISGAVSIISYEPVSDHKGKVQSYRVVARRE
Ga0208936_105552113300025404PeatlandAGLSPGDDGSVRDQLLKIIEPISGAVSIVKYEAVSDRTGKIQSYRVWVKRE
Ga0208937_104833413300025506PeatlandPGDDGSVRDQLLRIIEPISGAVSIIKYDPVFDGKGKVQSYRVWVKREE
Ga0207660_1029846013300025917Corn RhizosphereDDPAVRDQLLHIIEPIAGAVSIVSYEAVSDRKGQVQSYKVLAQRE
Ga0207700_1082621413300025928Corn, Switchgrass And Miscanthus RhizosphereGDDQSVRQQLLRILEPISGAVSIVSYETITDHKGKVQGYKVLAKRE
Ga0208775_100124943300025992Rice Paddy SoilPGDGTVRDQLLHIIEPISGAVSIESYEAVSDRTGNVQSYKVFAQRE
Ga0209804_107499513300026335SoilSPGDDHSVREQLLRIIEPISGAVSIVKYEPVTDSQGHVQTYRVVVKRE
Ga0207779_100771713300026928Tropical Forest SoilREQLLHIIEPISGAVSIVSYETVSDRKGQVQGYKVLAKRD
Ga0209730_102846723300027034Forest SoilVREQLLHIIEPISGAVSIVSYEAVSDSKGKVQSYKVLAKRD
Ga0209524_102673913300027521Forest SoilAAAITPGDDLSVRDQLRHIIEPISGEVSLVRYEPVPDKTGRVQVYKVWVHRE
Ga0209419_112517213300027537Forest SoilLLHIIEPISGAVSIVSYEPISDSKGKVQSYKVLAQRE
Ga0209735_100047753300027562Forest SoilIDGSSVSRGDETALRTEFLRVIQPISGDVSIVRYEPVSDRKGNVQGYRVWVKRR
Ga0209116_115098113300027590Forest SoilLLHIIEPISGAVSIVSYEAVSDAKGQVQSYKVLAKRD
Ga0208827_106010233300027641Peatlands SoilGNENSVRDQLLHIIEPISGEVSIVKYETVADRKGRVQSYKVWVKRE
Ga0209736_107249213300027660Forest SoilNDNSVRDQLLRIIEPISGAVSIMSYETVFDGKGKVQSYKVLAQRE
Ga0209626_116186313300027684Forest SoilRIIEPISGAVSIVSYETVSDGKGKVQSYKVLAQRE
Ga0208696_100058913300027696Peatlands SoilPGDDRAIRDQLLRIIEPISGAVSIVSYETVADGKGKVQSYKVLVKRE
Ga0209448_1004586443300027783Bog Forest SoilAVVAGDAQSVREQLLHIIEPISGAVSIVSYEAVSDAKGQVQSYKVLAKRD
Ga0209811_1036183823300027821Surface SoilRDQLLHIIEPISGAVSIVSYETVSDSHGRVQSYRVLAKRE
Ga0209773_1042003813300027829Bog Forest SoilIYAGTISPGDDRSVHDQLLRIIEPISGAVSIVKYETVADSKGHVQTYKVLVKRD
Ga0209580_1011650213300027842Surface SoilIRDQLLRIIEPISGAVSIVSYETVADRKGKVQSYKVLARRD
Ga0209580_1060552213300027842Surface SoilRDQLLHIIEPISGAVSIVSYEVVSDHKGKVQGYRVLAKRD
Ga0209465_1033397123300027874Tropical Forest SoilSDDPSLREQLLHIIEPISGAVSIVSYEKVSDHKGKLQGYRVVATRE
Ga0209465_1063450523300027874Tropical Forest SoilDQLLHIIEPISGAVSIISYETVSDSHGKVQSYRVLAKRE
Ga0209169_1002162043300027879SoilYQIEASAVSPGDDGSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQRQ
Ga0209169_1074369813300027879SoilVREQLLRIIEPISGSVSIVSYEAVSKGNLQSYKVVVRRD
Ga0209488_1004245113300027903Vadose Zone SoilDQSMRDQFLRIIKPISGEVSIVNYVPVADAKGHVQTYKVLVKR
Ga0302225_1028919023300028780PalsaTGVLVNSDGAGGLVYQIESAAISPGSDGVVRDQLLHIIEPISGGVSIVRYEGVVDRKGKVQSYKVWVKRE
Ga0302222_1004439343300028798PalsaREQLLQIIEPISGAVSIVSYERISDPKGQVQSYKVLAKRD
Ga0302226_1039196123300028801PalsaSVREQLLQIIEPISGAVSIVSYERISDPKGQVQSYKVLAKRD
Ga0302230_1016025313300028871PalsaDQLLHIIQPISGAVSIVSYEPVADGKGHVQSYKVLAKRE
Ga0302197_1036213423300028873BogVTTGDDASVRDQLLRIIQPISGDVSIVKYEAVGDGRGHVQSYKVLVKR
Ga0311359_1058612913300029914BogQLLRIIQPISGDVSIVKYEAVGDGRGHVQSYKVLVKR
Ga0302141_114124413300029919BogYQIAASAVTTGDDASVRDQLLRIIQPISGDVSIVKYEAVGDGRGHVQSYKVLVKR
Ga0302176_1036455413300030057PalsaQGGLVYQIEASAVSAGSDNAVRDQLLHIIEPISGGVAIVKYETVTDRKGRVQGYKVWVKR
Ga0302183_1014669423300030509PalsaILPGDDHSVRDQLLKIIEPISGAVSIVQYDAVKDGKGRVQSYKVLVQRQ
Ga0311357_1066097823300030524PalsaLVYQIESAAISPGSDGVVRDQLLHIIEPISGGVSIVRYEGVVDRKGKVQSYKVWVKRE
Ga0311356_1109008423300030617PalsaQIESAAISPGSDGVVRDQLLHIIEPISGGVSIVRYEGVVDRKGKVQSYKVWVKRE
Ga0310039_1000157013300030706Peatlands SoilGDDRAIRDQLLRIIEPISGAVSIVSYETVADGKGKVQSYKVLVKRE
Ga0302310_1035849823300030737PalsaRQQLLRIIEPISGAVTIVSYEAVSDGKGKVQSYKVLARRE
Ga0302311_1003704843300030739PalsaAITPGDDSAVRDQLLHTIEPISGAVTMVRYEGVIDQKGKVQSYRVWVKRK
Ga0265460_1000214743300030740SoilSAVSPGDDGSVRDQLLKIIEHISGGVSIVQYDAVKDGRGRVQSYKVLVQRQ
Ga0265459_1122434923300030741SoilAISPGDDSSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQR
Ga0302308_1066322923300031027PalsaDQSVREQLLQIIEPISGAVSIVSYERISDPKGQVQSYKVLAKRD
Ga0265760_1036703423300031090SoilGDDSAVRAELLHVIEPISGHVSIVSYEAVIDHGSHVQSYKVLVQRQ
Ga0302324_10020771643300031236PalsaAQLLRMIEPISGNVSIVSYEPVTDHGGHLQSYKVLVQRQ
Ga0265340_1007041343300031247RhizosphereLLRIIEPISGAVSIVSYETVSDSKGKVQGYKVLATRD
Ga0302326_1153326913300031525PalsaYEISGAGISPGDEASVREQLLRVIEPISGGVSIVRYDAVSDPKGKVQSYRVWVKRK
Ga0310686_10585564823300031708SoilDAQSVREQLLHIIEPISGAVSIVSYEAVANAKGQVQSYKVLAKRD
Ga0307475_1010203613300031754Hardwood Forest SoilAVSPGDDQVVRDQLLRIIEPISGAVSIVSYEPISDGKGKLQSYKVLAQRE
Ga0306921_1257442513300031912SoilVEGQLLRIIEPISGAVSIVSYEPVKDGKGTVQSYKVLAKRE
Ga0311301_1005446813300032160Peatlands SoilSAISPGDERSVREQLLRIIEPISGAVSIVSYETISDGKGKAQSYKVLAKRD
Ga0307470_1129593023300032174Hardwood Forest SoilVTPGDDRSVRQQLLDTIEPISGAVSIISYEPVSDHKGKVQSYRVVARRE
Ga0335079_1013374143300032783SoilNALRAGDDAAVREQLLRILEPISGAVSIVSYEKVSDPKGKLEGYRVVARRE
Ga0335078_1263664213300032805SoilLLRIIEPVSGAVSIVSYEPVSDRKGKIQSYKVIAKRE
Ga0335080_1064179033300032828SoilVREQLLRIVEPISGAVSIVSYETISDRKGNTQSYKVLAKRE
Ga0335080_1117638523300032828SoilNAVKDGDDQSVRDQLLHIIEPISGAVSIVSYEPLKDSKGKVQSYKVLAKRD
Ga0326727_1009732013300033405Peat SoilRIIEPISGAVAIVSYDRVSDGKGRVQSYKVVVKRE
Ga0326727_1114801413300033405Peat SoilDHSVRQQLLRIIEPISGAVSIVSYETVSDRKGQVQSYKVLVKRE
Ga0316212_100870633300033547RootsLLFQIEASAITPGDDLSVRDQLLKIIEPISGGVSIVQYDAVKDGRGRVQSYKVLVQR
Ga0370514_108141_27_1853300034199Untreated Peat SoilMPVDDASTRDQALRNQFMRIIKPISGDVKIVSYEPVTDGKGHVQTYKVLAKR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.