Metagenome / Metatranscriptome Family F045954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045954
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	42 residues
Representative Sequence	VRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Number of Associated Samples	111
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.17 %
% of genes near scaffold ends (potentially truncated)	85.53 %
% of genes from short scaffolds (< 2000 bps)	88.82 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.868 % of family members)
Environment Ontology (ENVO)	Unclassified (48.684 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.289 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 20.59% Coil/Unstructured: 55.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF04392	ABC_sub_bind	2.63
PF08281	Sigma70_r4_2	1.32
PF00536	SAM_1	1.32
PF02518	HATPase_c	1.32
PF10417	1-cysPrx_C	0.66
PF12833	HTH_18	0.66
PF00565	SNase	0.66
PF00126	HTH_1	0.66
PF01545	Cation_efflux	0.66
PF13505	OMP_b-brl	0.66
PF10108	DNA_pol_B_exo2	0.66
PF05988	DUF899	0.66
PF00580	UvrD-helicase	0.66
PF00230	MIP	0.66
PF06078	DUF937	0.66
PF00665	rve	0.66
PF00596	Aldolase_II	0.66
PF00805	Pentapeptide	0.66
PF13589	HATPase_c_3	0.66
PF04542	Sigma70_r2	0.66
PF08239	SH3_3	0.66
PF13356	Arm-DNA-bind_3	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.63
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.66
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.66
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.66
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.66
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.66
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.66
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.66
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.66
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.66
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.66
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.66
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.66
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.66
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.66
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.66
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.66
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.66
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	75.66 %
Unclassified	root	N/A	15.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.37 %
Unclassified	root	N/A	15.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	61.84 %
Unclassified	root	N/A	15.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.84 %
Unclassified	root	N/A	15.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.84 %
Unclassified	root	N/A	15.13 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.84 %
Unclassified	root	N/A	15.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459018\|G1P06HT01DEGTB	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300000956\|JGI10216J12902_100203904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	808	Open in IMG/M
3300000956\|JGI10216J12902_100786624	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300000956\|JGI10216J12902_117063987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300004463\|Ga0063356_103166273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300005187\|Ga0066675_10518068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005332\|Ga0066388_106407593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300005332\|Ga0066388_107194071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300005332\|Ga0066388_108815626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005363\|Ga0008090_14512281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300005406\|Ga0070703_10426455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300005439\|Ga0070711_100050387	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300005454\|Ga0066687_10208883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300005471\|Ga0070698_100715887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300005518\|Ga0070699_100190694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1821	Open in IMG/M
3300005713\|Ga0066905_100262494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1334	Open in IMG/M
3300005713\|Ga0066905_101093813	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300005713\|Ga0066905_101953747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300005764\|Ga0066903_101567116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1247	Open in IMG/M
3300005764\|Ga0066903_101702891	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005764\|Ga0066903_102869801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300005764\|Ga0066903_106121152	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300005764\|Ga0066903_107628405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005764\|Ga0066903_107823107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300005764\|Ga0066903_108025570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005764\|Ga0066903_108947651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300006051\|Ga0075364_10976530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300006173\|Ga0070716_100713302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300006797\|Ga0066659_10979094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300006904\|Ga0075424_100765323	Not Available	1030	Open in IMG/M
3300009100\|Ga0075418_12742774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300010043\|Ga0126380_10675792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300010047\|Ga0126382_10499100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300010047\|Ga0126382_10660049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300010358\|Ga0126370_10558822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300010358\|Ga0126370_10804706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300010358\|Ga0126370_12295581	Not Available	534	Open in IMG/M
3300010359\|Ga0126376_11380140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300010360\|Ga0126372_10621045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300010361\|Ga0126378_10769693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300010362\|Ga0126377_13516127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010366\|Ga0126379_10385576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1444	Open in IMG/M
3300010366\|Ga0126379_13257254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300010366\|Ga0126379_13603168	Not Available	519	Open in IMG/M
3300010376\|Ga0126381_100845419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300010396\|Ga0134126_11196771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300010398\|Ga0126383_12019897	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010398\|Ga0126383_12622934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300012199\|Ga0137383_10310513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300012202\|Ga0137363_10566809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300012205\|Ga0137362_10688604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	879	Open in IMG/M
3300012209\|Ga0137379_10837638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300012582\|Ga0137358_10593521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300012914\|Ga0157297_10004356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2762	Open in IMG/M
3300012948\|Ga0126375_10036975	Not Available	2485	Open in IMG/M
3300012948\|Ga0126375_11681931	Not Available	550	Open in IMG/M
3300012951\|Ga0164300_10441772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300012988\|Ga0164306_10592402	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300012989\|Ga0164305_11660281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300012989\|Ga0164305_11700497	Not Available	566	Open in IMG/M
3300015245\|Ga0137409_11058404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300015373\|Ga0132257_103362427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300016270\|Ga0182036_10714781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300016294\|Ga0182041_11224277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300016319\|Ga0182033_10171320	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300016319\|Ga0182033_10230135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1494	Open in IMG/M
3300016319\|Ga0182033_10438232	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300016319\|Ga0182033_11175696	Not Available	687	Open in IMG/M
3300016319\|Ga0182033_11992655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300016341\|Ga0182035_10213415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1535	Open in IMG/M
3300016341\|Ga0182035_11735562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300016357\|Ga0182032_11531120	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016404\|Ga0182037_10464317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300016404\|Ga0182037_11581282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300016422\|Ga0182039_11873588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300016445\|Ga0182038_10459528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300016445\|Ga0182038_11876362	Not Available	541	Open in IMG/M
3300016445\|Ga0182038_11880129	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300021168\|Ga0210406_10724070	Not Available	764	Open in IMG/M
3300021170\|Ga0210400_11311978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300021178\|Ga0210408_11122613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300021404\|Ga0210389_11324972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300025916\|Ga0207663_11652871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300025928\|Ga0207700_10803261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300025939\|Ga0207665_10061354	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300026277\|Ga0209350_1085939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300026524\|Ga0209690_1224394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300027874\|Ga0209465_10546009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300027875\|Ga0209283_10890564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300029636\|Ga0222749_10739718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300031226\|Ga0307497_10341693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300031545\|Ga0318541_10728616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300031546\|Ga0318538_10256666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300031561\|Ga0318528_10052158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2071	Open in IMG/M
3300031561\|Ga0318528_10066084	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300031573\|Ga0310915_10460906	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300031640\|Ga0318555_10762190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300031679\|Ga0318561_10198793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087	Open in IMG/M
3300031680\|Ga0318574_10280065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300031680\|Ga0318574_10431316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300031681\|Ga0318572_10818511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031719\|Ga0306917_10232441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1407	Open in IMG/M
3300031724\|Ga0318500_10446290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300031744\|Ga0306918_11256646	Not Available	570	Open in IMG/M
3300031748\|Ga0318492_10444670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300031748\|Ga0318492_10572582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300031764\|Ga0318535_10043020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1862	Open in IMG/M
3300031768\|Ga0318509_10145086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1307	Open in IMG/M
3300031768\|Ga0318509_10684835	Not Available	569	Open in IMG/M
3300031770\|Ga0318521_10408635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300031771\|Ga0318546_10592864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300031780\|Ga0318508_1059242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300031796\|Ga0318576_10182372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300031797\|Ga0318550_10387836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300031799\|Ga0318565_10066893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1691	Open in IMG/M
3300031820\|Ga0307473_10969918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031821\|Ga0318567_10655845	Not Available	596	Open in IMG/M
3300031833\|Ga0310917_10447825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300031845\|Ga0318511_10333845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300031879\|Ga0306919_10082535	Not Available	2220	Open in IMG/M
3300031880\|Ga0318544_10156949	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031890\|Ga0306925_10188888	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300031910\|Ga0306923_10038302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5220	Open in IMG/M
3300031910\|Ga0306923_10735768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300031912\|Ga0306921_11656821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	693	Open in IMG/M
3300031941\|Ga0310912_10766221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300031942\|Ga0310916_11373390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300031945\|Ga0310913_10302313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1129	Open in IMG/M
3300031945\|Ga0310913_10945047	Not Available	605	Open in IMG/M
3300031946\|Ga0310910_10663570	Not Available	825	Open in IMG/M
3300031946\|Ga0310910_10997644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300031947\|Ga0310909_10182454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1738	Open in IMG/M
3300031947\|Ga0310909_11480533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031959\|Ga0318530_10386938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031981\|Ga0318531_10433363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300032025\|Ga0318507_10139951	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300032035\|Ga0310911_10728577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300032059\|Ga0318533_11373562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300032066\|Ga0318514_10033531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2422	Open in IMG/M
3300032076\|Ga0306924_12430418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300032090\|Ga0318518_10676735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300032205\|Ga0307472_101831767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300033289\|Ga0310914_11422257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300033290\|Ga0318519_10620346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.05%
Host-Associated	Host-Associated	3.29%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.05%
Plants	Host-Associated → Plants	3.29%
Solid Waste	Engineered → Solid Waste	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.32%
Roots	Host-Associated → Plants → Roots	0.66%
Grass	Engineered → Solid Waste → Grass	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.92%
Loam	Environmental → Terrestrial → Soil → Loam	15.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.66%
Composting	Engineered → Solid Waste → Grass → Composting	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.32%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.66%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.66%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.66%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_00678060	2170459018	Switchgrass, Maize And Mischanthus Litter	YRVKFRDRNETTAYYTDSLEDAVNTAVEMTRKRAL
JGI10216J12902_1002039043	3300000956	Soil	SGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC*
JGI10216J12902_1007866245	3300000956	Soil	HLGLTLRKVRSGDYRVNFRDGNETTAYYTDDLEDAVNMGLEMVRKRA*
JGI10216J12902_1070157754	3300000956	Soil	HLGLTLRKVRSGDYRVSFRDGNETVAYYTDDLEDAVDVGLEMVRKRA*
JGI10216J12902_1170639872	3300000956	Soil	CSGDYRVNFRDGNETTDYYTDSLEDAINTAIGMARRRELHHTELET*
Ga0063356_1031662731	3300004463	Arabidopsis Thaliana Rhizosphere	LRIVRSGAYRVNFRDGNETTAYYTDNLDDAVNTAIEMACKR*
Ga0066675_105180681	3300005187	Soil	LTLRKVRSGDYRVNFRDGNETTRYYTDSLEDAVKTAVEMTRKRAL*
Ga0066388_1064075931	3300005332	Tropical Forest Soil	VRSGDYRVNFRDGNETTAYYTDNLEDAANTAVEMARKRAL*
Ga0066388_1071940711	3300005332	Tropical Forest Soil	VRSGDYRVNFRDGNETSAYYTDDLEDAVSAAVEMARKRGQSPC*
Ga0066388_1088156262	3300005332	Tropical Forest Soil	KVRSGDYRVNFRDGNETTAYYTDSLEDAVNTAVEMARKRAQSPC*
Ga0008090_145122812	3300005363	Tropical Rainforest Soil	VRSGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMVRKRGK*
Ga0070703_104264551	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LRKVRSGDYRVNFRDGNEPAPYYTDDLENAVNTAVEMARKRGK*
Ga0070711_1000503871	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RKVRSGDYRVNFRDGNEMTAYYTDNLEDTVNTAVEMARKRAL*
Ga0066687_102088831	3300005454	Soil	LRKVRSGDYRVNFRDGNETTRYYTDSLEDAVKTAVEMTRKRAL*
Ga0070698_1007158873	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RSGNYRVNFRDGNETTAYYTDDLEDAVNTTVEMARKRAL*
Ga0070699_1001906945	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	CSGDYRVNFRDGNETTAYYTDDLEDAVNTAVEMARKRALRAAPHRLGT*
Ga0066905_1002624943	3300005713	Tropical Forest Soil	YRVNFRDGNETTAYYTDNLEDAVNTAVEMTRRRAL*
Ga0066905_1010938132	3300005713	Tropical Forest Soil	LRQLHSGNYRVNFRDGNETTAYYTDKFEDAVNAVVAMARKRAL*
Ga0066905_1019537472	3300005713	Tropical Forest Soil	TLRKVRSGDYRVNFRDGNEMTPYYTDNLEDAVSTAVEMARKRG*
Ga0066903_1015671161	3300005764	Tropical Forest Soil	MVRFGEYRVNFRDGNETTAYYTDNLEDAVNTAVEIARKRAL*
Ga0066903_1017028911	3300005764	Tropical Forest Soil	VRSGDYRVNFRDGNETTAYYTDDLEDAVNVGLEMVRKRA*
Ga0066903_1028698011	3300005764	Tropical Forest Soil	MGVSGTLRHVRSGDYRVNFRDGSETAAYYTDSLEDAVNAAVDMARKRAL*
Ga0066903_1061211523	3300005764	Tropical Forest Soil	YRVNFRDGNEMTAYYTDSLENAVNTAVEMARKCGQSPC*
Ga0066903_1076284051	3300005764	Tropical Forest Soil	KVRSGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC*
Ga0066903_1078231072	3300005764	Tropical Forest Soil	MMQGGKGRTNFRDGNETSAYYTDNLEDAVNTAVEMARRRAL*
Ga0066903_1080255701	3300005764	Tropical Forest Soil	GEYRVNFRDGNETTAYYTDNLEDAVKTAIEMARKRAL*
Ga0066903_1089476513	3300005764	Tropical Forest Soil	LGFTLRKVRSGDYRVSFRDGNETTAYYTDTLEAAVNTAVGDGP*
Ga0075364_109765301	3300006051	Populus Endosphere	TLRKVRSGDYRVNFRDINEPYYTDNLEDAVTTAVEMARRRAL*
Ga0070716_1007133023	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LGLTLRKVRSGDYRVNFRDGDEMTAYNTDSLEDAVNTAIEMTRKRAL*
Ga0066659_109790941	3300006797	Soil	LGLTLRKVRSGYRVNFRDGNETTRYYTDSLEDAVKTAVEMTRKRAL*
Ga0075424_1007653234	3300006904	Populus Rhizosphere	YRVNFRDGNETTAYYTDNLDDAVNTAIEMARERAL*
Ga0075418_127427741	3300009100	Populus Rhizosphere	KVRSGDYRVSFPDGGESAYYTDDLEDAVNTAVEMARRRAS*
Ga0126380_106757922	3300010043	Tropical Forest Soil	VRSGDYRVTFRDGDETGSYYTDDLEDAVNTAVEMARKRAF*
Ga0126382_104991003	3300010047	Tropical Forest Soil	LGLTLRKVRSGDYRVNFRDGNETTAYYTGSLEDAVNTAVELARKRALRAAPCD*
Ga0126382_106600495	3300010047	Tropical Forest Soil	YRVNFRDGNEPAPYYTDDLEDAVNTAVEMVRKRGK*
Ga0126370_105588222	3300010358	Tropical Forest Soil	TLRKVRSGDYRVNFRDGNENMAYYTDDLEDAVSAAVEMARNRGQSPC*
Ga0126370_108047061	3300010358	Tropical Forest Soil	SGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMVRKRGK*
Ga0126370_122955811	3300010358	Tropical Forest Soil	DYRVNCRDGNETMAYYTDNLEDAVNTAVEMARIGQGQSD*
Ga0126376_113801401	3300010359	Tropical Forest Soil	RSGDYRVNFRDGNEMTAYYTDSLENAVNTAVEMARKRGQSPC*
Ga0126372_106210452	3300010360	Tropical Forest Soil	VNFRDGSESGPYYTDNLEDAVNTAVEMARKRAKSGAS*
Ga0126378_107696935	3300010361	Tropical Forest Soil	SGDYRVNFRDGSETTVYYTDSLEDAVNTAVEMSRKRGL*
Ga0126377_135161271	3300010362	Tropical Forest Soil	GLTLRQLRSGNYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRGLVE*
Ga0126379_103855761	3300010366	Tropical Forest Soil	VRSGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMARK
Ga0126379_132572541	3300010366	Tropical Forest Soil	HLGLTLRKVRSGDYRVNFRDGNEATAYYTDNLEDAVNTVVEKARKRGQSPC*
Ga0126379_136031681	3300010366	Tropical Forest Soil	FRDGNETTAYYTGSLEDAVNTAVELARKRALRAAPCD*
Ga0126381_1008454194	3300010376	Tropical Forest Soil	LRSGNYRVNFRDGNETTAYYTDNLEDAVNTAVEMTRRRAL*
Ga0134126_111967712	3300010396	Terrestrial Soil	YRVSFPDGSEAAYYTDDLEDAVNTAVEMARRRAS*
Ga0126383_120198972	3300010398	Tropical Forest Soil	GLTLRKVRSGNYRVNFRDGNEKTACYTDNFEDAVNTAVEMARKRAKL*
Ga0126383_126229343	3300010398	Tropical Forest Soil	DYRVNFRDGNETTAYYTDNLEDAVNTAVEMTRRRAL*
Ga0137383_103105131	3300012199	Vadose Zone Soil	VRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARERAL*
Ga0137363_105668092	3300012202	Vadose Zone Soil	VRKVRSSDYRVNFRDGNEMTAYYTDNLEDAVNTAVVMARKRAKDAILA*
Ga0137362_106886044	3300012205	Vadose Zone Soil	KVRSGDYRVNFRDGNATGACYKDNLEDAVNTAVEMARKKLK*
Ga0137379_108376381	3300012209	Vadose Zone Soil	KVRSGDYRVNFPDGNETEAYYTDNLEDAVNAAVEMTRKRGK*
Ga0137358_105935213	3300012582	Vadose Zone Soil	YRVNFRDGNETTAYYTDNLEDAVNTAIEMTRKRAL*
Ga0157297_100043561	3300012914	Soil	LTLTLRKVRSGDYRVNFPNADDSAAYYTDNLEDAINAAVEMARKGTT
Ga0126375_100369754	3300012948	Tropical Forest Soil	MAPVNFRDGNETTAYYTDDLEDAVNTAVEMARKRGLVE*
Ga0126375_116819312	3300012948	Tropical Forest Soil	KVRSGDYRVSSRDGDETIAYYTQNLEDAINAAVEMARKRAL*
Ga0164300_104417722	3300012951	Soil	VRSGAYRVNFRDGNETTAYYTDSLEDAVTTAVEMVRKRELSA
Ga0164306_105924022	3300012988	Soil	LLRSGKYRVNYRDGKETTAYYTDDLEDAVNTAVEMARKREL*
Ga0164305_116602814	3300012989	Soil	SGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMARKRGK*
Ga0164305_117004972	3300012989	Soil	MAIPIRLDANETTAYYTDSLENAVNTAVEMARKRGQSPC*
Ga0137409_110584041	3300015245	Vadose Zone Soil	VRSGKYRVNFRDGDETTAYYTDNLEDAVNTAVEMARKRVVSAAPYS*
Ga0132257_1033624271	3300015373	Arabidopsis Rhizosphere	KVRSGDYRVNFRDANETTPYYTDSLEDAVKTAVMTRKRAL*
Ga0182036_107147811	3300016270	Soil	GLTLRQLRSGNYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0182041_112242771	3300016294	Soil	DYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0182033_101713203	3300016319	Soil	QLRSGNYRVNFRDGNETTAYYADNLEDAVHTAVEMARKRGQSPC
Ga0182033_102301351	3300016319	Soil	MVRSGEYRVNFRDGNETTAYYTDNLEDAIKTAIEMARR
Ga0182033_104382322	3300016319	Soil	LRQLCSGNYRVNFRDGNETTAYYTDKLEDAVNTAVEMARERAL
Ga0182033_111756961	3300016319	Soil	YRVNFRDGNETTAYYTDNLEDAVNTAVEMARERAL
Ga0182033_119926552	3300016319	Soil	TLRQLRSGNYRVNFRDGNETTAYYTDKLEDAVNAVVAMAHKRAL
Ga0182035_102134152	3300016341	Soil	YRVNFRDGNETTAYYTDNLEDAVKTAIEMARKRAL
Ga0182035_117355621	3300016341	Soil	RSGNYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0182032_115311201	3300016357	Soil	GLTLRKVRSGDYRVNFRDGNETSAYYTDNLEDAVNTAVEMAGRRAL
Ga0182037_104643172	3300016404	Soil	RSGDYRVNFRDGNETTAYYTDNLEDAVKTAIEMARKRAL
Ga0182037_115812821	3300016404	Soil	SGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0182039_118735881	3300016422	Soil	GDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMARKRGK
Ga0182038_104595283	3300016445	Soil	SGNYRVNFRDGNETTAYYTDNVEDAVNTAVAMARKRAL
Ga0182038_118763621	3300016445	Soil	YRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0182038_118801292	3300016445	Soil	RSGDYRVNFRDGNETSAYYTDNLEDAVNTAVEMAGRRAL
Ga0210406_107240701	3300021168	Soil	IRVNFRDGNKMTAHYTDNLEDAVNTVIEKARKRGQSPC
Ga0210400_113119782	3300021170	Soil	ALHLGLTLRKVRSGHYRVNFRDGDESTACYAVDLEDAVNAAGRDGS
Ga0210408_111226132	3300021178	Soil	VRSGAYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRALELRHTE
Ga0210389_113249722	3300021404	Soil	TLRKVRSGDYRVNFPDGSENAYYTDDLEDAVNTAVEMARQRAQ
Ga0207663_116528711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ITLRKVRSGDYRVNFRDGDEMTAYNTDSLEDAVNTAIEMTRKRAL
Ga0207700_108032613	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YRVNFRDGNEPAPYYTDDLEDAVNTAVEMARKRGK
Ga0207665_100613542	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RSGDYRVNFRDGDETTVHYTDNLEDAVNTAVEMARKREL
Ga0209350_10859394	3300026277	Grasslands Soil	GLALRKVRSGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMARKRGK
Ga0209690_12243943	3300026524	Soil	DYRVNFRDGNEPAPYYTDDLEDAVNTAVEMARKRGK
Ga0209465_105460091	3300027874	Tropical Forest Soil	TLRKVRSGDYRVNFRDGNETTAYYTGSLEDAVNTAVELARKRALRAAPCD
Ga0209283_108905643	3300027875	Vadose Zone Soil	KVRSGDYRVSSRDGDETTAYYTDTLEDAVCTAVEMARKRAL
Ga0222749_107397181	3300029636	Soil	HLGLTLRKVRSGDYRVSFREGNETAAYYTDSLEDAVKTAVELARRRTF
Ga0307497_103416933	3300031226	Soil	LTLRKVRSGDYRVNFRDGNETTAYYTDNLEDAVNSAVEMARKRALTN
Ga0318516_101791573	3300031543	Soil	MRSGAYRVNFRDGNETTAYYTDHLEDAVNTAVEMARTRGQSRC
Ga0318541_107286161	3300031545	Soil	MVRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0318538_102566663	3300031546	Soil	ELTLRHLRSGNYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0318528_100521583	3300031561	Soil	VRSGDYRVNLRDGNETTAYYADNLEDAVNTAVEMARKRTL
Ga0318528_100660845	3300031561	Soil	TVRNVRSGDYRVSFRDGNGTTAYYTDNLEDAVSTAVDIARKRAL
Ga0310915_104609063	3300031573	Soil	RKVRSGDYRVNFRDGNEMTPYYTDNLEDAVSAAVEMARKRGQSPC
Ga0318555_107621902	3300031640	Soil	YRVNFRDGNETTAYYTDNLEDAANTAVEMARKRAL
Ga0318561_101987931	3300031679	Soil	LRKVRSGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMVRKRGK
Ga0318574_102800651	3300031680	Soil	RVDFRDGNEATAYYTDNLEDAANTAVEMARKRGQSPC
Ga0318574_104313163	3300031680	Soil	LGLTLRKVRSGDYRVNFRDGNEMTAYYTDSLENAVNTAVEMARKRGQSPC
Ga0318572_108185111	3300031681	Soil	YRVNFRDGNETSAYYTDNLEDAVNTAVEMARRRAL
Ga0306917_102324414	3300031719	Soil	TLRMVRSGDYRVNFRDGNETTAYYTDNLEDAIKTAIEMARR
Ga0318500_104462901	3300031724	Soil	RMVRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0306918_110690241	3300031744	Soil	LRQVRSGDYRVNFRDGNETTAYYTNHLEDAVNTAVEMVRTREQSRC
Ga0306918_112566461	3300031744	Soil	GNYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0318492_102527054	3300031748	Soil	TLRQVRSGAYRVNFRDGNENTAYYTDLLEDAVNTAVEMARTRGQSRC
Ga0318492_104446701	3300031748	Soil	GDYRVNLRDGNETTAYYADNLEDAVNTAVEMARKRTL
Ga0318492_105725821	3300031748	Soil	HLGLTLRKVRSGDYRVNFRDGNEMTPYYTDNLEDAVSAAVEMARKRGQSPC
Ga0318494_104542361	3300031751	Soil	MRSGAYRVNFRDGNETTAYYTDHLEDAVNTAVEMARTRGQS
Ga0318535_100430201	3300031764	Soil	GDYRGNFRDGNEATACYTDNLEDAVNTAVEMARKRAL
Ga0318509_101450861	3300031768	Soil	SGDYRVTFRDGDETGSYYTDDLEDAVNTAVEMARKRAF
Ga0318509_106848351	3300031768	Soil	AGSQIVNFRDRNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0318521_104086353	3300031770	Soil	HLRLTLRKVRSGDYRVNLRDGNETTAYYADKLEDAVNTAVEMARKRTL
Ga0318546_105928642	3300031771	Soil	LGLTLRKVCSGDYRVNFRDGNETTAYYTTNLEDAVKTAVAMARKRAL
Ga0318508_10592421	3300031780	Soil	VRSGDYRVNFRDGNETSAYYTDNLEDAVNTAVEMARRRAL
Ga0318576_101823721	3300031796	Soil	GDYRVNFRDGNETSAYYTDNLEDAVNTAVEMARRRAL
Ga0318550_103878363	3300031797	Soil	RKVRSGDYRVNLRDGNETTAYYADKLEDAVNTAVEMARKRTL
Ga0318565_100668932	3300031799	Soil	LGLTLRKVRSGDYRVNFRDGDETTVHYTDNLEDAVNTAVEMARKREL
Ga0307473_109699181	3300031820	Hardwood Forest Soil	GDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC
Ga0318567_106558451	3300031821	Soil	TMRKVRSGDYRVNFRDGNATTAYYTDSLEDAANTAVEMARKRGQSPC
Ga0310917_104478252	3300031833	Soil	GLTLRKVRSGHYRVNFRDGDETTAYYADDLEDAVNTAVEMARKREL
Ga0318511_103338453	3300031845	Soil	RKVRSGDYRVNFRDGNEPAPYYTDDLEDAVNTAVEMVRKRGK
Ga0306919_100825351	3300031879	Soil	GDYRVDFRDGSETTVYYTDSLEDAVNTAVEMSRKRGL
Ga0318544_101569491	3300031880	Soil	LCSGNYRVNFRDGNETSAYYTDKLEDAVNTAVEMARERAL
Ga0306925_101888881	3300031890	Soil	VRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0306923_100383025	3300031910	Soil	VRSGDYRVNLRDGNETTAYYADKLEDAVNTAVEMARKRTL
Ga0306923_107357681	3300031910	Soil	SGDYRVNFRDGNETTAHYTDNLEDAVNAAVEMARKRPSAP
Ga0306921_116568212	3300031912	Soil	LRQMRSSDYRVNFRDGSETAAYDTDNLEDAVNAAVDMARKRALLSSTVQSGT
Ga0310912_107662211	3300031941	Soil	HLGLTLRKVRSGEYRVNFRDGNETTAYYTDKLEYAVNTAVEMARERAL
Ga0310916_113733901	3300031942	Soil	LGLTLRMVRSGDYRVNFRDGNETTAYYTDNLEDAIKTAIEMARR
Ga0310913_103023131	3300031945	Soil	TLRKVRSGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC
Ga0310913_109450471	3300031945	Soil	DYRVNGNETTAYYTDNLEDAVNTVVEKARKRGLVG
Ga0310910_106635701	3300031946	Soil	NYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0310910_109976442	3300031946	Soil	LGLTLRMVRSGDYRVNFRDGNETTAYYTDNLEDAVNTAVEMARKRAL
Ga0310909_101824545	3300031947	Soil	RSGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC
Ga0310909_114805331	3300031947	Soil	LRMVRSGDYRVNFRDGNETTAYYTDNLEDAIKTAIEMARR
Ga0318530_100474521	3300031959	Soil	MRSGAYRVNFRDGNETTAYYTDHLEDAVNTAVEMARTRGQ
Ga0318530_103869382	3300031959	Soil	TLRKVRSGDYRVNFRDGSETTVYYTDSLEDAVNTAVEMSRKRGL
Ga0318531_104333633	3300031981	Soil	GDYRVNFRDGSETTVYYTDSLEDAVNTAVEMSRKRGL
Ga0306922_109240863	3300032001	Soil	VRSGDYRVNFRDGNETTAYYTNHLEDAVNTAVEMVRTREQSRC
Ga0318507_101399512	3300032025	Soil	LTLRQLCSGNYRVNFRDGNETTAYYTDKLEDAVNTAVEMARERAL
Ga0310911_107285771	3300032035	Soil	VRSGEYRVNFRDGNETTAYYTDKLEYAVNTAVEMARERAL
Ga0318533_113735623	3300032059	Soil	LGLTLRKVRSGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARKRGQSPC
Ga0318514_100335314	3300032066	Soil	TLRKVRSGEYRVNFRDGNETSAYYTDNLEDAVNTAVEMARRRAL
Ga0306924_124304182	3300032076	Soil	SGDYRVNFRDGSETTVYYTDSLEDAVNTAVEMSRKRGL
Ga0318518_106767352	3300032090	Soil	TQRKVRSGDYRVNFRDGNEMTAYYTDNLEDAVNTVVEKARTRGQSRC
Ga0318540_100071808	3300032094	Soil	HPAPMRSGAYRVNFRDGNETTAYYTDHLEDAVNTAVEMARTRGQSRC
Ga0307472_1018317671	3300032205	Hardwood Forest Soil	RKVRSGDYQVNFRDESESGPYYTDNLEDAVNTAVEMARKRGK
Ga0310914_114222572	3300033289	Soil	HLRSGNYRVNFRDGNETTAYYTDKLEDAVDAVVAMARRRAL
Ga0318519_106203461	3300033290	Soil	HLGLTLRKVRSGHYRVNFCDGDETTAYYADDLEDAVNTAVEMARKREL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences