Metagenome / Metatranscriptome Family F045922

Basic Information
Family ID	F045922
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	38 residues
Representative Sequence	MIEEAMSITPIIFVLVILLFGFDSTGQVKTRRKHNYG
Number of Associated Samples	126
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.21 %
% of genes near scaffold ends (potentially truncated)	32.89 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (83.553 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.605 % of family members)
Environment Ontology (ENVO)	Unclassified (41.447 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.053 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.85% β-sheet: 0.00% Coil/Unstructured: 66.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF02776	TPP_enzyme_N	14.47
PF00903	Glyoxalase	5.92
PF12697	Abhydrolase_6	4.61
PF02261	Asp_decarbox	4.61
PF08240	ADH_N	1.97
PF02922	CBM_48	1.32
PF06912	DUF1275	1.32
PF06081	ArAE_1	1.32
PF01568	Molydop_binding	1.32
PF00724	Oxidored_FMN	1.32
PF00378	ECH_1	0.66
PF00128	Alpha-amylase	0.66
PF13414	TPR_11	0.66
PF13452	MaoC_dehydrat_N	0.66
PF02931	Neur_chan_LBD	0.66
PF01988	VIT1	0.66
PF04545	Sigma70_r4	0.66
PF03466	LysR_substrate	0.66
PF02515	CoA_transf_3	0.66
PF02322	Cyt_bd_oxida_II	0.66
PF13515	FUSC_2	0.66
PF16884	ADH_N_2	0.66
PF02771	Acyl-CoA_dh_N	0.66
PF01575	MaoC_dehydratas	0.66
PF04632	FUSC	0.66
PF02775	TPP_enzyme_C	0.66
PF14833	NAD_binding_11	0.66
PF06314	ADC	0.66
PF00873	ACR_tran	0.66
PF00582	Usp	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0853	Aspartate 1-decarboxylase	Coenzyme transport and metabolism [H]	4.61
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.32
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	1.32
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	1.32
COG4129	Uncharacterized membrane protein YgaE, UPF0421/DUF939 family	Function unknown [S]	1.32
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.66
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.66
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.66
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.66
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.66
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.66
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.66
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.66
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.66
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.66
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.55 %
Unclassified	root	N/A	16.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.55 %
Unclassified	root	N/A	16.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.55 %
Unclassified	root	N/A	16.45 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	45.39 %
Unclassified	root	N/A	16.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	45.39 %
Unclassified	root	N/A	16.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.32 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.32 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	24.34 %
Unclassified	root	N/A	16.45 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.32 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.32 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.34 %
Unclassified	root	N/A	16.45 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.32 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.32 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.66 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.66 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.66 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.34 %
Unclassified	root	N/A	16.45 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.63 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1.32 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.32 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.66 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.66 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.66 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.66 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.66 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.34 %
Unclassified	root	N/A	16.45 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.63 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	1.32 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.32 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.66 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.66 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.66 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.34 %
Unclassified	root	N/A	16.45 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.97 %
Acidiphilium sp. 21-62-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-62-4	1.32 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.32 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.66 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.66 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.66 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.66 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.66 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.34 %
Unclassified	root	N/A	16.45 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.97 %
Acidiphilium sp. 21-62-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-62-4	1.32 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.32 %
Streptomyces sp. F001	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. F001	0.66 %
Kribbella sp. VKM Ac-2568	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2568	0.66 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.66 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.66 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.66 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02GTA5W	Not Available	531	Open in IMG/M
2088090014\|GPIPI_16976364	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
2088090014\|GPIPI_17438355	Not Available	1677	Open in IMG/M
2166559005\|cont_contig33417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1027	Open in IMG/M
2166559005\|cont_contig74028	Not Available	700	Open in IMG/M
2170459005\|F1BAP7Q01ALTXI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
2170459009\|GA8DASG02GCGCE	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
2170459013\|GO6OHWN01DUZXV	Not Available	506	Open in IMG/M
2170459023\|GZGNO2B01D7IC8	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
2170459024\|GZTSFBX01EC6NI	Not Available	518	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100469861	Not Available	610	Open in IMG/M
3300000891\|JGI10214J12806_12137429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300000955\|JGI1027J12803_105753465	Not Available	557	Open in IMG/M
3300000955\|JGI1027J12803_108590427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1438	Open in IMG/M
3300002245\|JGIcombinedJ26739_100121134	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300005187\|Ga0066675_10225053	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005294\|Ga0065705_10059222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1380	Open in IMG/M
3300005328\|Ga0070676_11460744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	526	Open in IMG/M
3300005457\|Ga0070662_100275618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1360	Open in IMG/M
3300005457\|Ga0070662_100905932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300005540\|Ga0066697_10130171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1479	Open in IMG/M
3300005540\|Ga0066697_10484570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2568	705	Open in IMG/M
3300005552\|Ga0066701_10368319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300005554\|Ga0066661_10909853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300005559\|Ga0066700_10780899	Not Available	645	Open in IMG/M
3300005576\|Ga0066708_10967314	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005586\|Ga0066691_10260404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300005598\|Ga0066706_10079065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2327	Open in IMG/M
3300005598\|Ga0066706_10226304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. F001	1447	Open in IMG/M
3300005617\|Ga0068859_100358697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1553	Open in IMG/M
3300005713\|Ga0066905_100042304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2713	Open in IMG/M
3300005842\|Ga0068858_100313333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1499	Open in IMG/M
3300006028\|Ga0070717_10087887	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300006034\|Ga0066656_11130391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-62-4	504	Open in IMG/M
3300006046\|Ga0066652_101539341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300006046\|Ga0066652_102005021	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006175\|Ga0070712_100126055	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300006796\|Ga0066665_10129203	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300006797\|Ga0066659_10088024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2080	Open in IMG/M
3300006797\|Ga0066659_10292478	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300006844\|Ga0075428_101835573	Not Available	631	Open in IMG/M
3300006854\|Ga0075425_101331172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300006854\|Ga0075425_102974088	Not Available	519	Open in IMG/M
3300007255\|Ga0099791_10093054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1382	Open in IMG/M
3300007255\|Ga0099791_10159861	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300007258\|Ga0099793_10085103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1447	Open in IMG/M
3300009012\|Ga0066710_102160798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300009137\|Ga0066709_104346786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	517	Open in IMG/M
3300009147\|Ga0114129_11547322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300009176\|Ga0105242_10417879	Not Available	1256	Open in IMG/M
3300010301\|Ga0134070_10029083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1823	Open in IMG/M
3300010323\|Ga0134086_10038130	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300010358\|Ga0126370_11125543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300010361\|Ga0126378_10464604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1380	Open in IMG/M
3300010401\|Ga0134121_11882214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	627	Open in IMG/M
3300012189\|Ga0137388_11536530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300012198\|Ga0137364_10172638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1574	Open in IMG/M
3300012200\|Ga0137382_10019234	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300012200\|Ga0137382_10151427	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300012200\|Ga0137382_10775168	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012202\|Ga0137363_11226277	Not Available	637	Open in IMG/M
3300012202\|Ga0137363_11680978	Not Available	527	Open in IMG/M
3300012203\|Ga0137399_10252965	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300012204\|Ga0137374_10070348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3451	Open in IMG/M
3300012205\|Ga0137362_10281369	Not Available	1438	Open in IMG/M
3300012205\|Ga0137362_11699957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300012208\|Ga0137376_11022912	Not Available	707	Open in IMG/M
3300012208\|Ga0137376_11175612	Not Available	656	Open in IMG/M
3300012210\|Ga0137378_11547594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	573	Open in IMG/M
3300012211\|Ga0137377_10644923	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012285\|Ga0137370_10033021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2702	Open in IMG/M
3300012350\|Ga0137372_10032626	All Organisms → cellular organisms → Bacteria	4758	Open in IMG/M
3300012351\|Ga0137386_10471300	Not Available	905	Open in IMG/M
3300012355\|Ga0137369_10569555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	791	Open in IMG/M
3300012358\|Ga0137368_10188245	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300012359\|Ga0137385_11017372	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012360\|Ga0137375_10539477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	984	Open in IMG/M
3300012361\|Ga0137360_10316365	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300012361\|Ga0137360_11803420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300012361\|Ga0137360_11889223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012532\|Ga0137373_10649608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300012683\|Ga0137398_10291025	Not Available	1096	Open in IMG/M
3300012685\|Ga0137397_10599695	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300012912\|Ga0157306_10238646	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012917\|Ga0137395_10070499	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300012917\|Ga0137395_10218866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1331	Open in IMG/M
3300012918\|Ga0137396_11099680	Not Available	568	Open in IMG/M
3300012924\|Ga0137413_10578868	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012929\|Ga0137404_11144583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300012930\|Ga0137407_11283971	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012930\|Ga0137407_11529991	Not Available	635	Open in IMG/M
3300012930\|Ga0137407_11861018	Not Available	574	Open in IMG/M
3300012930\|Ga0137407_11972899	Not Available	557	Open in IMG/M
3300012958\|Ga0164299_11400041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300012960\|Ga0164301_11339038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300012961\|Ga0164302_10150578	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300012971\|Ga0126369_10515908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1255	Open in IMG/M
3300012971\|Ga0126369_11547204	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012977\|Ga0134087_10596474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300012984\|Ga0164309_10812778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	754	Open in IMG/M
3300013296\|Ga0157374_10068651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	3335	Open in IMG/M
3300013296\|Ga0157374_10592862	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300014166\|Ga0134079_10371147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300015200\|Ga0173480_11220402	Not Available	509	Open in IMG/M
3300015264\|Ga0137403_10495136	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300015371\|Ga0132258_11103783	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300015372\|Ga0132256_102497817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-62-4	618	Open in IMG/M
3300015373\|Ga0132257_101299127	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300015374\|Ga0132255_101206819	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015374\|Ga0132255_103679920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300016371\|Ga0182034_11311364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300018072\|Ga0184635_10042958	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300018431\|Ga0066655_11395186	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300018465\|Ga0190269_11139361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	606	Open in IMG/M
3300019362\|Ga0173479_10051005	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300019881\|Ga0193707_1191493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300019886\|Ga0193727_1000535	All Organisms → cellular organisms → Bacteria	14733	Open in IMG/M
3300019887\|Ga0193729_1033408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2156	Open in IMG/M
3300019890\|Ga0193728_1013660	All Organisms → cellular organisms → Bacteria	4078	Open in IMG/M
3300020199\|Ga0179592_10357701	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300020580\|Ga0210403_10033505	All Organisms → cellular organisms → Bacteria	4108	Open in IMG/M
3300020581\|Ga0210399_10952951	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300021078\|Ga0210381_10254994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300021168\|Ga0210406_10202278	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300021413\|Ga0193750_1073388	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300021510\|Ga0222621_1025109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1212	Open in IMG/M
3300021560\|Ga0126371_11410072	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	827	Open in IMG/M
3300025315\|Ga0207697_10026973	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300025315\|Ga0207697_10031671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2163	Open in IMG/M
3300025927\|Ga0207687_10669716	Not Available	879	Open in IMG/M
3300026295\|Ga0209234_1188257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300026331\|Ga0209267_1324634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300026332\|Ga0209803_1065997	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300026536\|Ga0209058_1060993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2079	Open in IMG/M
3300026548\|Ga0209161_10336587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	686	Open in IMG/M
3300026551\|Ga0209648_10094275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2468	Open in IMG/M
3300026557\|Ga0179587_10342927	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300027610\|Ga0209528_1026017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1292	Open in IMG/M
3300027643\|Ga0209076_1178306	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028380\|Ga0268265_10616632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300028536\|Ga0137415_10170833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2004	Open in IMG/M
3300028809\|Ga0247824_10318909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300028814\|Ga0307302_10572866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300028878\|Ga0307278_10101638	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300030844\|Ga0075377_11534995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300030935\|Ga0075401_11773217	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031022\|Ga0138301_1859431	Not Available	1443	Open in IMG/M
3300031122\|Ga0170822_16096033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300031122\|Ga0170822_16152895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1487	Open in IMG/M
3300031231\|Ga0170824_109765027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300031474\|Ga0170818_115644237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300032180\|Ga0307471_100444854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1434	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.87%
Host-Associated	Host-Associated	13.82%
Engineered	Engineered	1.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.89%
Plants	Host-Associated → Plants	13.82%
Aquatic	Environmental → Aquatic	1.97%
Modeled	Engineered → Modeled	1.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.92%
Sediment	Environmental → Aquatic → Sediment	1.32%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.26%
Loam	Environmental → Terrestrial → Soil → Loam	3.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	1.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.32%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.32%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045922

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00202450	2065487018	Soil	MIKKAMSVTPIVFVMIILLLGFDSTEQVKTARQPNQG
GPIPI_00216830	2088090014	Soil	MTEGAMSMASIIFVLVILLFGFDSTGQLKTRRKNNYG
GPIPI_01850120	2088090014	Soil	MIEEAMSITLIICVLVILLFGFDSAGQIKARRQHNYG
cont_0417.00002540	2166559005	Simulated	MIEEAMSITLIICVLVILLFGFDSAGKVKARRQHNYG
cont_0028.00005120	2166559005	Simulated	MTEEAMSITPIIFVLLILLFGFGSAEQVKSRRKHNHG
E41_03423620	2170459005	Grass Soil	MIEEAMSITPIIFVLVILLFGFDSAGQVKTRRKHNYA
F47_03902640	2170459009	Grass Soil	MIQEAMSITPIIFVLVILLFGFDSAGQVRTQLLASK
N57_00343940	2170459013	Grass Soil	MTEEAMSITPIIFVLLILLFGFGSAEQVKSRRRHN
FA3_00306620	2170459023	Grass Soil	MIEQAMSITPIIFVLVILLFGFDLTGQVKARRKHNYG
FD1_03099000	2170459024	Grass Soil	FLSLTEQAMSITLIICVLVILLFGFDSAGQVKARREHNYG
INPhiseqgaiiFebDRAFT_1004698611	3300000364	Soil	EAMSITPIVLLLVILLFGFDSTGQLEAGRKHNYG*
JGI10214J12806_121374293	3300000891	Soil	MEEAMGITAIVFVLIILLFSLDSTGQVKTRQQRNRLRRILR
JGI1027J12803_1057534652	3300000955	Soil	MTEGAMSMASIIFVLVILLFGFDSTGQLKTRRKNNYG*
JGI1027J12803_1085904274	3300000955	Soil	SSMSLTPIVFILVILLFGFDSTEQITPGKKTRTF*
JGIcombinedJ26739_1001211342	3300002245	Forest Soil	MIEEAMTITPIIFVLVILLFGFDSAGQVKTRRKHTYG*
Ga0066675_102250532	3300005187	Soil	LSMIEEAMSTTLIVFILIILLFGFDATGQVKIRRKHNYD*
Ga0065705_100592222	3300005294	Switchgrass Rhizosphere	MEEGMGITPIVFALIILLFGFDSIGQVKTRQQRNWLRRVFTVAHMMP*
Ga0070676_114607442	3300005328	Miscanthus Rhizosphere	PRRGDFLSMIEEAMSITLIIFLLVILLFGFDSTGQVKTHRQHNPG*
Ga0070662_1002756183	3300005457	Corn Rhizosphere	LSMIEEAMSITLIIFLLVILLFGFDSTGQVKTHRQHNPG*
Ga0070662_1009059321	3300005457	Corn Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTGQVKTRRQHNHGYF*
Ga0066697_101301712	3300005540	Soil	MIEEAMSTTLIVFILIILLFGFDATGQVKIRRKHNYD*
Ga0066697_104845702	3300005540	Soil	CSDKEAMSITPIIFVLVILLFGFDSAGQVKTRPQHNYG*
Ga0066701_103683192	3300005552	Soil	MIEEVMSITPIIFLLVILLFGFDSVGQVKTRRQHTQG*
Ga0066661_109098532	3300005554	Soil	MIEEAMSITPIIFVLVILLFGFDSAEQAKTRQRHNYG*
Ga0066700_107808991	3300005559	Soil	MSITPIIFVLVILLFGFDSAGQGETRRKHNYGSN*
Ga0066708_109673141	3300005576	Soil	MIEETMSITPIIFVLVILLFGFDSTGEVKTRRQHNHG*
Ga0066691_102604041	3300005586	Soil	MIEEAMGMISIIFVLVILVFGFDSAGQVKPHRKHNQG*
Ga0066706_100790652	3300005598	Soil	MIEETMSTMTIVFVLIILLFGFDSTGQVNTRGQHNHG*
Ga0066706_102263043	3300005598	Soil	MIEETMSTMTIVFVLIILLFGFDSTGQVKTRRQHNHG*
Ga0068859_1003586973	3300005617	Switchgrass Rhizosphere	MIEEAMSITLIIFLLVILLFGFDSTGQVKTHRQHNPG*
Ga0066905_1000423042	3300005713	Tropical Forest Soil	MMEEDMSITAIAFVLIILLLGFDSTGQVKTHRQRN*
Ga0068858_1003133331	3300005842	Switchgrass Rhizosphere	EQAVSITPIIFLLVILLFGFDSTGQAKTRQQHNHG*
Ga0070717_100878873	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFLLVILLFGFDSAKQVKTRRQDNYA*
Ga0066656_111303911	3300006034	Soil	MSITPIIFVLVILLFGFDSAGQVETRRKYNYGSN*
Ga0066652_1015393412	3300006046	Soil	MIEEAMSITPIIFVLVILLFGFDSTGQVKTRRKHNYG*
Ga0066652_1020050212	3300006046	Soil	EAMSITPIIFVLVILLFGFDLTGQVKTRRKHNYG*
Ga0070712_1001260553	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLVILLFGFDSTEQVKTRRQHNNG*
Ga0066665_101292032	3300006796	Soil	MIEEAMSLTPIIFVLVILLFGFDSAGHKTRRQHNHG*
Ga0066659_100880242	3300006797	Soil	MIEEAMSTMTIVFVLVILLFGFDSTGEAKTRGKNNYG*
Ga0066659_102924781	3300006797	Soil	LSMIEEAMSITPIIFVLVILLFGFDSAEQAKTRQRHNYG*
Ga0075428_1018355732	3300006844	Populus Rhizosphere	MEEAMGITLIVFILIILLFGLDPTGQVKTRQQRN*
Ga0075425_1013311722	3300006854	Populus Rhizosphere	LLIMEEAMGITLIVFILIILLFGLDPTGQVKTRQQRN*
Ga0075425_1029740881	3300006854	Populus Rhizosphere	MIEEAMSITPIIFVLVILLFGFDSAGQVKTRRKHNYG*
Ga0099791_100930543	3300007255	Vadose Zone Soil	MIEETMSTMTIVFVLIILLFGFDSTGEVKTRRKHA
Ga0099791_101598612	3300007255	Vadose Zone Soil	EEAMSITPIIFVLVILLFGFDLTGQVKTRRKHNYG*
Ga0099793_100851032	3300007258	Vadose Zone Soil	MIEEAMSMISIIFVLVILLFGFDSAGQVKPHRKHNHG*
Ga0066710_1021607983	3300009012	Grasslands Soil	LSMIEETMSTMTIVFVLIILLFGFDSTGEVKTRRQHNHG
Ga0066709_1043467862	3300009137	Grasslands Soil	LSMIEETMSTMTIVFVLIILLFGFDSTGQVKTRRQHNHG*
Ga0114129_115473222	3300009147	Populus Rhizosphere	MIEEDMSITLIVFVLVILLFGFDSTGQVKTRRQHNHG*
Ga0105242_104178791	3300009176	Miscanthus Rhizosphere	RGDFLSMIEEAMSITPIIFVLIILLFGFDSTGQVKTRRQHNHGYF*
Ga0134070_100290834	3300010301	Grasslands Soil	MIKEAMSTTPIVFFLIILLFGFDSAGQVKTRREHNYG*
Ga0134086_100381302	3300010323	Grasslands Soil	MIEETMSTMTIVFVLIILLFGFDSTGQVKTRRKHNYG*
Ga0126370_111255432	3300010358	Tropical Forest Soil	MIEKAMSATLIVFLLIILLFGFDSTGQVKTRKQHNHG*
Ga0126378_104646042	3300010361	Tropical Forest Soil	MSEEAMSITAIIFVLVILLFGFDSTEQVNAPPGEVES*
Ga0134121_118822142	3300010401	Terrestrial Soil	MTEEALSITPIIFLLVILLFGFDSTGQAKTRQQHNHG*
Ga0137388_115365302	3300012189	Vadose Zone Soil	MIEEAMSITSIIFVLVILLFGFDSTEEVKTRRQHNYG*
Ga0137364_101726382	3300012198	Vadose Zone Soil	MIEEAMSTMTIIFVLVILLFGFDSAEQAKTRQRHNYG*
Ga0137382_100192344	3300012200	Vadose Zone Soil	MIEESMSITAIIFVLVILLFGSDSTGQVKTRRQHHHG*
Ga0137382_101514272	3300012200	Vadose Zone Soil	MIEETMSITPIIFVLVILLFGFDLTGHVKTRRKHNYG*
Ga0137382_107751682	3300012200	Vadose Zone Soil	RGDFLSMIEETMSITPIIFVLVILLFGFDSAGQAKTRQRHKYG*
Ga0137363_112262773	3300012202	Vadose Zone Soil	MIEEAMSITPIIFILVILLFGFNSTGQVNARRKHNYG*
Ga0137363_116809781	3300012202	Vadose Zone Soil	LPVIEQAMSITPIIFVLVILLFGFDSAGQVKPHRKHNGG*
Ga0137399_102529652	3300012203	Vadose Zone Soil	LSLTEEAMSITPIIFVLVILLFGFDLTGQVKVRRKHNYG*
Ga0137374_100703482	3300012204	Vadose Zone Soil	MIEEAMSLTPIIFVLVILLFGFDSTGQVKTRRKHNHG*
Ga0137362_102813693	3300012205	Vadose Zone Soil	MIEEAMSMISIIFVLAILLFGFDLAGQVKPHRKHNHG*
Ga0137362_116999571	3300012205	Vadose Zone Soil	MTQEAMSITPIIFALVILLFGFDSAGQVKTRRKHNYG*
Ga0137376_110229122	3300012208	Vadose Zone Soil	EETMSTMTIVFVLIILLFGFDSTGPVEPGRKHTYG*
Ga0137376_111756122	3300012208	Vadose Zone Soil	SMMEEAMSITPIVFVLVILLFGFDSAGPVKKHQN*
Ga0137378_115475942	3300012210	Vadose Zone Soil	FLSLTEEAMSITLIICVLVILLFGFDSTRQVKAPRQHNYG*
Ga0137377_106449231	3300012211	Vadose Zone Soil	MIEEAMSTMTIIFVLVILLFGFDSAEQAETRQRHNYG*
Ga0137370_100330213	3300012285	Vadose Zone Soil	MIEEAMSTMTIIFVLLILLFGFDSGGQVRTRQHG*
Ga0137372_100326264	3300012350	Vadose Zone Soil	MIEEAMSITLIIFVLVILLFGFDSTGEVKTRRQHDPD*
Ga0137386_104713002	3300012351	Vadose Zone Soil	PRRGDFLSMIEEVMSITPIIFLLVILLFGFDSAGQVKTRRKQNYG*
Ga0137369_105695551	3300012355	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSAGQAKTRQRHKYG*
Ga0137368_101882452	3300012358	Vadose Zone Soil	MIEEAMSLTPTIFVLVILLFDCDSTGQVKTRRKHNHG*
Ga0137385_110173722	3300012359	Vadose Zone Soil	MIEETMSTMTIVFVLVILLFGFDSTAEAKIRRKNNYG*
Ga0137375_105394771	3300012360	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVKTRRKHNYG*
Ga0137360_103163652	3300012361	Vadose Zone Soil	MIEDAMSTTLIVFVLIILLFGFDSTGEVKTRRQHNHG*
Ga0137360_118034202	3300012361	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFGFNSTGQIKTRRKHNYD*
Ga0137360_118892231	3300012361	Vadose Zone Soil	MIEEGMSVTPIIFVLVILLFGFDSTGQVKTRPQHNHG*
Ga0137373_106496082	3300012532	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFGFDSTGQVKTRRKHNHG*
Ga0137398_102910253	3300012683	Vadose Zone Soil	FLSMIEEAMSMISIIFVLVILLFGFDSAGQVKPHRKHNHG*
Ga0137397_105996952	3300012685	Vadose Zone Soil	LSLTEEAMSITPIIFVLVILLFGFDLTGQIKTRRKHNYG*
Ga0157306_102386461	3300012912	Soil	MEEAMGITAIVFVLIILLFGFDSAGQVNTRPKRNYG*
Ga0137395_100704992	3300012917	Vadose Zone Soil	MIEEAMSMISIIFVLVIFLFGFDSAGQVKPHRKHNHG*
Ga0137395_102188661	3300012917	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALK
Ga0137396_110996801	3300012918	Vadose Zone Soil	IEEAMSMISIIFVLVILLFGFDSAGQVKTYRKNNYG*
Ga0137413_105788682	3300012924	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFGFDSTGQVKARQEHNYS*
Ga0137404_111445831	3300012929	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFGFDSTGQVKTRRQHNHG*
Ga0137407_112839711	3300012930	Vadose Zone Soil	SMIEEAVSITPIVFVLIILLFGFDSAGQVKTRRKHTYG*
Ga0137407_115299911	3300012930	Vadose Zone Soil	PRGGDFLSMIEEAMSITPIIFVLLILLFGFDLAGQVEIPRDHNND*
Ga0137407_118610181	3300012930	Vadose Zone Soil	IEEAMSITPIIFVLVILLFGFDSAGQVNTRPKHNYG*
Ga0137407_119728991	3300012930	Vadose Zone Soil	RGRGDFLSMIEEAMSMISIIFVLAILLFGFDLAGQVKPHRKHNHG*
Ga0164299_114000412	3300012958	Soil	SMIEETMSTMTIVFVLIILLFGFDSTEEVKTRRQHNHG*
Ga0164301_113390381	3300012960	Soil	MSEEAMSITSIAFFLIILLFGFDSAGQAKTRRKHNYG*
Ga0164302_101505782	3300012961	Soil	MIEEAMSTTPIVFILISLLFGFDSTGQVEARPKQTYG*
Ga0126369_105159082	3300012971	Tropical Forest Soil	MEEAMGITLIVFVLIILLFGLDSTEQVKTRQQRN*
Ga0126369_115472042	3300012971	Tropical Forest Soil	MKEAMGITLIVFVLIILLFGLDSTGQVKARQQRN*
Ga0134087_105964741	3300012977	Grasslands Soil	MIEEAMSITLIIFVLVILLFGFDWTGQVRTRQHNN
Ga0164309_108127782	3300012984	Soil	MIEEAMSITPIIFLLVILLFGFDSTGEVKIRRQHEHG*
Ga0157374_100686512	3300013296	Miscanthus Rhizosphere	MEEAMGITLIVFVLIILLFGLDSTGQVKTRQNRN*
Ga0157374_105928623	3300013296	Miscanthus Rhizosphere	LPSRGDLLSMIEEAMSITLIIFLLVILLFGFDSTGQVKTHRQHNPG*
Ga0134079_103711471	3300014166	Grasslands Soil	MIEEAMSITPIIFVLVISLFGFDSTGQVQDPPKTQSRL
Ga0173480_112204021	3300015200	Soil	GNFLSMIEEAMSITPIIFVLVILLFGFDSTGQVKARRQHNYG*
Ga0137403_104951362	3300015264	Vadose Zone Soil	SMIEETMSTMTIVFVLIILLFGFDSTGEVKTRRQHNHG*
Ga0132258_111037831	3300015371	Arabidopsis Rhizosphere	MIEEAMSITPIIFLLVILLFGFDSTGQVKIRRQHNHG*
Ga0132256_1024978171	3300015372	Arabidopsis Rhizosphere	QAMSAISIIFVLIILLFGFDSAEQVKARRKHNYGSH*
Ga0132257_1012991271	3300015373	Arabidopsis Rhizosphere	MEEAMGITLIVFVLIILLFGLDSTGQVKTRQQRD*
Ga0132255_1012068192	3300015374	Arabidopsis Rhizosphere	PRGSDFLSIIKEAMSITPIIFVLVILLFGFDLTGHVEIPRRPQ*
Ga0132255_1036799202	3300015374	Arabidopsis Rhizosphere	LSMIEEAMSITPIIFLLVILLFGFDSTGKVKTRQQPNHG*
Ga0182034_113113642	3300016371	Soil	MIEEAMSITLILFVLVILLFGFDSAGQVKARRQHNHG
Ga0184635_100429582	3300018072	Groundwater Sediment	MIEETMSTMTIVFVLIILLFGCDSTEEVKARQQHNHG
Ga0066655_113951862	3300018431	Grasslands Soil	MIEEAMSTTLIVFILIILLFGFDATGQVKIRRKHNYD
Ga0190269_111393612	3300018465	Soil	MIEETMSITPIIFVLVILLFGFDSTEQVKTRRQHNNG
Ga0173479_100510051	3300019362	Soil	MIEEAMSITPIIFVLVILLFGFDSAGQVKTRRKHNYG
Ga0193707_11914931	3300019881	Soil	DFLSMIEKAISITPIVLLLIILLFGFDLTGQVETRREHNNG
Ga0193727_100053512	3300019886	Soil	MIEEAMSIMPIVFVLIILLFGLDSTEEVKTRRQHNNG
Ga0193729_10334083	3300019887	Soil	LSIIEEAMSITPIIFVLVILLFGFDSAGQINTRPKHNHG
Ga0193728_10136602	3300019890	Soil	MIEETMSTMTIVFVLIILLFGFDSTGQVKTRRQHNHG
Ga0179592_103577011	3300020199	Vadose Zone Soil	LSLTEEAMSITPIIFVLVILLFGFDLTGQVKVRRKHNYG
Ga0210403_100335055	3300020580	Soil	MIEEAMSITPIIFVLVILLFGFNSTGQIKTRRKHNYG
Ga0210399_109529512	3300020581	Soil	DFFSMIEQAMSITPIIFVLVILLFGFNSTGQIKTRRKHNYG
Ga0210381_102549941	3300021078	Groundwater Sediment	MIEETMSITPIIFVLVILLFGFDLTEQVETRREHNNG
Ga0210406_102022783	3300021168	Soil	MIEEAMSITPIIFVLVILLFGFNSAGQIKTRRKHNHG
Ga0193750_10733882	3300021413	Soil	MEGAMSITPIIFVLVILLFGFDSTGQVKARQEHNYS
Ga0222621_10251092	3300021510	Groundwater Sediment	MIEEIMNTMTIIFVLVILLFGFDSTAEVKTRRQHNHG
Ga0126371_114100722	3300021560	Tropical Forest Soil	MSEEAMSITAIIFVLVILLFGFDSTEQVNAPRGEVES
Ga0207697_100269733	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITLIIFLLVILLFGFDSTGQVKTHRQHNPG
Ga0207697_100316712	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTGQVKTRRQHNHGYF
Ga0207687_106697161	3300025927	Miscanthus Rhizosphere	LSMIEEAMSITPIIFVLIILLFGFDSTGQVKTRRQHNHGYF
Ga0209234_11882571	3300026295	Grasslands Soil	MIEEAMSLTPIIFVLVILLFGFDSAGHKTRRQHNHG
Ga0209267_13246342	3300026331	Soil	MIEEAMSITPIIFVLVILLFGFDSAEQAKTRQRHNYG
Ga0209803_10659972	3300026332	Soil	MIEEAMTITPIIFVFVLIILLFGFDSTGQVKTRRKHNYG
Ga0209058_10609931	3300026536	Soil	DLLSMIEETMSTMTIVFVLIILLFGFDSTGQVKTRRQHNHG
Ga0209161_103365872	3300026548	Soil	IIEETMSTMTIVFVLIILLFGFDSTGEVKTRRQHNHG
Ga0209648_100942755	3300026551	Grasslands Soil	MIEEAVSITPIIFVLVILLFGFDSAGQVNTRPKHNHG
Ga0179587_103429272	3300026557	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFGFDLTGQVKVRRKHNYG
Ga0209528_10260173	3300027610	Forest Soil	MIEEAMTITPIIFVLVILLFGFDSAGQVKTRRKHTYG
Ga0209076_11783062	3300027643	Vadose Zone Soil	MIEEAMSMISIIFVLVILLFGFDSAGQVKPHRKHNHG
Ga0268265_106166322	3300028380	Switchgrass Rhizosphere	MIEEAMSITAIIFVLVTLLFGFDSAGQVEAGRKHTYG
Ga0137415_101708334	3300028536	Vadose Zone Soil	ARAGDFLSMIEEAMSMISIIFVLVILLFGFDSAGQVKPHRKHNHG
Ga0247824_103189092	3300028809	Soil	MIEEAMSITTIIFVLVILLFGFDSAGQVKTRRKNNYG
Ga0307302_105728661	3300028814	Soil	RRGDFLSMIEETMSITPIIFVLVILLFGFDLTEQVETRREHNNG
Ga0307278_101016383	3300028878	Soil	LSVIEEAMSITPIIFVLVILLFGFDSVGQAKTRRQHNYG
Ga0075377_115349952	3300030844	Soil	MTEEAMSITPIIFVLLILLFGFDSAEQVKSRRKHNHG
Ga0075401_117732171	3300030935	Soil	MIEDAMSTTLIVFVLVILLFGFDSAGQVNTRPKHTHD
Ga0138301_18594312	3300031022	Soil	MTQEAIHPMRITPIIFALVILLFGCDSAGQVKTRWKHNYG
Ga0170822_160960332	3300031122	Forest Soil	MIEEAMSITPIVFVLIILLFGFDSTGQVNARRQHNNG
Ga0170822_161528952	3300031122	Forest Soil	MIEDAMSTTLIVFVLVILLFGFDSTGQVKTRRQHNHG
Ga0170824_1097650272	3300031231	Forest Soil	LSLTEQAMSLTPIIFVLLILLFGFDSAEQVNSHRKNNHG
Ga0170818_1156442372	3300031474	Forest Soil	MIEEAMSITAIIFVLVILLFGFDSAAQVNARRKHNYG
Ga0307471_1004448543	3300032180	Hardwood Forest Soil	MIEEAMTITPIVFVLIILLFGFDSTGEVKTRRQHNHG

Hidden Markov Model


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