Metagenome / Metatranscriptome Family F045918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F045918
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	76 residues
Representative Sequence	MEEAEHALSPGELDQADAADRTRVWRLDQFIDLGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL
Number of Associated Samples	110
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.60 %
% of genes near scaffold ends (potentially truncated)	23.03 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (71.053 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.526 % of family members)
Environment Ontology (ENVO)	Unclassified (46.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.605 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF05988	DUF899	1.97
PF01145	Band_7	1.32
PF00583	Acetyltransf_1	1.32
PF01966	HD	1.32
PF13683	rve_3	1.32
PF07883	Cupin_2	1.32
PF00466	Ribosomal_L10	0.66
PF01464	SLT	0.66
PF05103	DivIVA	0.66
PF07690	MFS_1	0.66
PF02861	Clp_N	0.66
PF00487	FA_desaturase	0.66
PF01548	DEDD_Tnp_IS110	0.66
PF07676	PD40	0.66
PF14490	HHH_4	0.66
PF00211	Guanylate_cyc	0.66
PF12728	HTH_17	0.66
PF12848	ABC_tran_Xtn	0.66
PF00392	GntR	0.66
PF02371	Transposase_20	0.66
PF00903	Glyoxalase	0.66
PF07498	Rho_N	0.66
PF01152	Bac_globin	0.66
PF02604	PhdYeFM_antitox	0.66
PF02562	PhoH	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.32
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	0.66
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.66
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.66
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.66
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.66
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.66
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.66
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.66
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
All Organisms	root	All Organisms	28.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
cellular organisms	root	All Organisms → cellular organisms	28.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.39 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.76 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.66 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.21 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.32 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.66 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.66 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.66 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.21 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.32 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.66 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.66 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.21 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	1.32 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.66 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.66 %
Aestuariimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Aestuariimicrobium	0.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.21 %
Rhodococcus jostii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii	1.32 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.66 %
Aestuariimicrobium kwangyangense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Aestuariimicrobium → Aestuariimicrobium kwangyangense	0.66 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.21 %
Rhodococcus jostii RHA1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1.32 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.66 %
Aestuariimicrobium kwangyangense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Aestuariimicrobium → Aestuariimicrobium kwangyangense	0.66 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101867982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300001535\|A3PFW1_10183215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1213	Open in IMG/M
3300001535\|A3PFW1_10457218	Not Available	640	Open in IMG/M
3300001536\|A1565W1_10713702	Not Available	586	Open in IMG/M
3300005166\|Ga0066674_10304678	Not Available	749	Open in IMG/M
3300005179\|Ga0066684_10025569	All Organisms → cellular organisms → Bacteria	3141	Open in IMG/M
3300005187\|Ga0066675_10242893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1283	Open in IMG/M
3300005435\|Ga0070714_100254953	Not Available	1623	Open in IMG/M
3300005435\|Ga0070714_101049657	Not Available	793	Open in IMG/M
3300005439\|Ga0070711_100628121	Not Available	898	Open in IMG/M
3300005445\|Ga0070708_101515425	Not Available	625	Open in IMG/M
3300005445\|Ga0070708_101778518	Not Available	572	Open in IMG/M
3300005467\|Ga0070706_101416925	Not Available	636	Open in IMG/M
3300005468\|Ga0070707_101197805	Not Available	726	Open in IMG/M
3300005536\|Ga0070697_101419786	Not Available	620	Open in IMG/M
3300005549\|Ga0070704_100154295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1809	Open in IMG/M
3300005552\|Ga0066701_10745837	Not Available	586	Open in IMG/M
3300005555\|Ga0066692_10131707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300005555\|Ga0066692_10839918	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005559\|Ga0066700_10654154	Not Available	727	Open in IMG/M
3300005842\|Ga0068858_101013805	Not Available	814	Open in IMG/M
3300006028\|Ga0070717_10807511	Not Available	853	Open in IMG/M
3300006049\|Ga0075417_10732749	Not Available	509	Open in IMG/M
3300006175\|Ga0070712_100239309	Not Available	1445	Open in IMG/M
3300006175\|Ga0070712_101161811	Not Available	671	Open in IMG/M
3300006175\|Ga0070712_101917824	Not Available	519	Open in IMG/M
3300006796\|Ga0066665_10583447	Not Available	903	Open in IMG/M
3300006796\|Ga0066665_11545453	Not Available	520	Open in IMG/M
3300006852\|Ga0075433_10122730	Not Available	2307	Open in IMG/M
3300006914\|Ga0075436_100770792	Not Available	715	Open in IMG/M
3300007076\|Ga0075435_100495130	Not Available	1057	Open in IMG/M
3300007076\|Ga0075435_101051348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Aestuariimicrobium → Aestuariimicrobium kwangyangense	711	Open in IMG/M
3300007788\|Ga0099795_10239726	Not Available	778	Open in IMG/M
3300009038\|Ga0099829_10192500	Not Available	1647	Open in IMG/M
3300009038\|Ga0099829_11143276	Not Available	645	Open in IMG/M
3300009089\|Ga0099828_11118482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	700	Open in IMG/M
3300009090\|Ga0099827_10260148	Not Available	1461	Open in IMG/M
3300009090\|Ga0099827_11210930	Not Available	656	Open in IMG/M
3300009090\|Ga0099827_11976065	Not Available	507	Open in IMG/M
3300009098\|Ga0105245_10950701	Not Available	902	Open in IMG/M
3300009098\|Ga0105245_12752228	Not Available	545	Open in IMG/M
3300009101\|Ga0105247_10295940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1121	Open in IMG/M
3300009137\|Ga0066709_100947056	Not Available	1258	Open in IMG/M
3300009137\|Ga0066709_101024175	Not Available	1210	Open in IMG/M
3300010154\|Ga0127503_10448254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	997	Open in IMG/M
3300010335\|Ga0134063_10528326	Not Available	593	Open in IMG/M
3300010373\|Ga0134128_10389204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1557	Open in IMG/M
3300010396\|Ga0134126_10316445	Not Available	1827	Open in IMG/M
3300011269\|Ga0137392_10938105	Not Available	712	Open in IMG/M
3300011270\|Ga0137391_11541065	Not Available	509	Open in IMG/M
3300011271\|Ga0137393_10814980	Not Available	798	Open in IMG/M
3300011992\|Ga0120146_1035126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300012010\|Ga0120118_1142073	Not Available	576	Open in IMG/M
3300012011\|Ga0120152_1058562	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012011\|Ga0120152_1081220	Not Available	957	Open in IMG/M
3300012014\|Ga0120159_1117067	Not Available	751	Open in IMG/M
3300012014\|Ga0120159_1165013	Not Available	604	Open in IMG/M
3300012189\|Ga0137388_10202190	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300012189\|Ga0137388_11905972	Not Available	524	Open in IMG/M
3300012198\|Ga0137364_10463396	Not Available	951	Open in IMG/M
3300012199\|Ga0137383_10019542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4672	Open in IMG/M
3300012200\|Ga0137382_10260431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300012200\|Ga0137382_10305128	Not Available	1111	Open in IMG/M
3300012201\|Ga0137365_10844864	Not Available	669	Open in IMG/M
3300012201\|Ga0137365_10939643	Not Available	629	Open in IMG/M
3300012201\|Ga0137365_11008410	Not Available	603	Open in IMG/M
3300012204\|Ga0137374_10129466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2301	Open in IMG/M
3300012204\|Ga0137374_11056841	Not Available	582	Open in IMG/M
3300012206\|Ga0137380_10263876	Not Available	1550	Open in IMG/M
3300012206\|Ga0137380_10331683	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300012207\|Ga0137381_10285319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300012207\|Ga0137381_10780067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300012207\|Ga0137381_11199701	Not Available	652	Open in IMG/M
3300012207\|Ga0137381_11653778	Not Available	531	Open in IMG/M
3300012208\|Ga0137376_10096811	Not Available	2496	Open in IMG/M
3300012209\|Ga0137379_11443944	Not Available	590	Open in IMG/M
3300012209\|Ga0137379_11726467	Not Available	522	Open in IMG/M
3300012210\|Ga0137378_10143189	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300012210\|Ga0137378_10802001	Not Available	854	Open in IMG/M
3300012210\|Ga0137378_10923840	Not Available	786	Open in IMG/M
3300012211\|Ga0137377_10023654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5474	Open in IMG/M
3300012211\|Ga0137377_11957280	Not Available	502	Open in IMG/M
3300012211\|Ga0137377_11970946	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012349\|Ga0137387_10850621	Not Available	660	Open in IMG/M
3300012349\|Ga0137387_10928585	Not Available	628	Open in IMG/M
3300012350\|Ga0137372_10598613	Not Available	809	Open in IMG/M
3300012350\|Ga0137372_10841695	Not Available	656	Open in IMG/M
3300012353\|Ga0137367_10374574	Not Available	1011	Open in IMG/M
3300012354\|Ga0137366_11244458	Not Available	504	Open in IMG/M
3300012356\|Ga0137371_10042647	All Organisms → cellular organisms → Bacteria	3502	Open in IMG/M
3300012356\|Ga0137371_10236456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1428	Open in IMG/M
3300012356\|Ga0137371_10263979	Not Available	1344	Open in IMG/M
3300012361\|Ga0137360_11071867	Not Available	696	Open in IMG/M
3300012363\|Ga0137390_10874508	Not Available	854	Open in IMG/M
3300012532\|Ga0137373_10745173	Not Available	727	Open in IMG/M
3300012683\|Ga0137398_10587629	Not Available	770	Open in IMG/M
3300012923\|Ga0137359_10975591	Not Available	728	Open in IMG/M
3300012929\|Ga0137404_10406837	Not Available	1201	Open in IMG/M
3300012951\|Ga0164300_11175100	Not Available	507	Open in IMG/M
3300012955\|Ga0164298_10777620	Not Available	682	Open in IMG/M
3300012957\|Ga0164303_10526626	Not Available	762	Open in IMG/M
3300012958\|Ga0164299_10560634	Not Available	773	Open in IMG/M
3300012958\|Ga0164299_11063227	Not Available	602	Open in IMG/M
3300012960\|Ga0164301_10700541	Not Available	762	Open in IMG/M
3300012984\|Ga0164309_10057126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2291	Open in IMG/M
3300012984\|Ga0164309_10372360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1056	Open in IMG/M
3300012985\|Ga0164308_10146094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1740	Open in IMG/M
3300012985\|Ga0164308_10797123	Not Available	823	Open in IMG/M
3300012986\|Ga0164304_10884758	Not Available	697	Open in IMG/M
3300012986\|Ga0164304_11752152	Not Available	519	Open in IMG/M
3300012987\|Ga0164307_11289592	Not Available	610	Open in IMG/M
3300012989\|Ga0164305_10467164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300012989\|Ga0164305_11382009	Not Available	619	Open in IMG/M
3300013105\|Ga0157369_12418791	Not Available	532	Open in IMG/M
3300013294\|Ga0120150_1046839	Not Available	838	Open in IMG/M
3300013764\|Ga0120111_1155501	Not Available	520	Open in IMG/M
3300013765\|Ga0120172_1145193	Not Available	563	Open in IMG/M
3300013768\|Ga0120155_1032047	Not Available	1657	Open in IMG/M
3300013772\|Ga0120158_10001220	All Organisms → cellular organisms → Bacteria	33176	Open in IMG/M
3300013772\|Ga0120158_10005575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12882	Open in IMG/M
3300014154\|Ga0134075_10499022	Not Available	545	Open in IMG/M
3300014827\|Ga0120171_1037207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1620	Open in IMG/M
3300014827\|Ga0120171_1078077	Not Available	892	Open in IMG/M
3300014968\|Ga0157379_10853228	Not Available	862	Open in IMG/M
3300017939\|Ga0187775_10159931	Not Available	809	Open in IMG/M
3300017966\|Ga0187776_10347713	Not Available	978	Open in IMG/M
3300018061\|Ga0184619_10082521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1428	Open in IMG/M
3300018468\|Ga0066662_11377296	Not Available	728	Open in IMG/M
3300019879\|Ga0193723_1163223	Not Available	587	Open in IMG/M
3300019888\|Ga0193751_1021183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3198	Open in IMG/M
3300019888\|Ga0193751_1090015	Not Available	1204	Open in IMG/M
3300021080\|Ga0210382_10165657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300021344\|Ga0193719_10234311	Not Available	779	Open in IMG/M
3300021363\|Ga0193699_10194624	Not Available	841	Open in IMG/M
3300025898\|Ga0207692_10784961	Not Available	622	Open in IMG/M
3300025905\|Ga0207685_10864868	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025916\|Ga0207663_10846893	Not Available	730	Open in IMG/M
3300025922\|Ga0207646_11113347	Not Available	695	Open in IMG/M
3300025928\|Ga0207700_10089544	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2426	Open in IMG/M
3300026297\|Ga0209237_1137420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300026524\|Ga0209690_1309437	Not Available	502	Open in IMG/M
3300027862\|Ga0209701_10220108	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300027875\|Ga0209283_10274178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1116	Open in IMG/M
3300027882\|Ga0209590_10199439	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1264	Open in IMG/M
3300031226\|Ga0307497_10116547	Not Available	1064	Open in IMG/M
3300031366\|Ga0307506_10538569	Not Available	500	Open in IMG/M
3300031938\|Ga0308175_100006821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8260	Open in IMG/M
3300031996\|Ga0308176_10004562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9026	Open in IMG/M
3300032205\|Ga0307472_100509181	Not Available	1040	Open in IMG/M
3300032828\|Ga0335080_10444049	Not Available	1386	Open in IMG/M
3300033158\|Ga0335077_11385146	Not Available	679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.76%
Host-Associated	Host-Associated	7.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.79%
Plants	Host-Associated → Plants	7.24%
Aquatic	Environmental → Aquatic	1.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.58%
Freshwater	Environmental → Aquatic → Freshwater	1.32%
Sediment	Environmental → Aquatic → Sediment	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.32%
Loam	Environmental → Terrestrial → Soil → Loam	11.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1018679821	3300000956	Soil	MEEAEHAFSPGELDQPDAADWTRVWRLDQLVGLGFDVVRASLMADDSRVELAQARKLVALGCPLETASRILL*
A3PFW1_101832152	3300001535	Permafrost	MEVSASRSIPCGMEESKQALSPGELDQADEVDWTQVWRLEQFLALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
A3PFW1_104572182	3300001535	Permafrost	MEEAEHALAPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
A1565W1_107137022	3300001536	Permafrost	MEEAQHALSPSDLDQADAPDATRVWRHDQFIALGFDVVRASLMADDSRVDLGQARKLVALGCPLETASRILL*
Ga0066674_103046781	3300005166	Soil	ALSPGELDQVDEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLAALGCPLETASRILL*
Ga0066684_100255693	3300005179	Soil	MSRMAHGGFSLEVDSQVVMEESEQAISSVELDQADEVDWTQVWRLDQFLALGFDVVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0066675_102428933	3300005187	Soil	MEESEQAISSVELDQADEVDWTQVWRLDQFLALGFDVVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0070714_1002549533	3300005435	Agricultural Soil	MSRMALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRILL*
Ga0070714_1010496571	3300005435	Agricultural Soil	MEEAEQVLSPSELDQVDAPDETWIWRLEQFIALGFDVERASLMADDAGVDLAQARKLAALGCPLETASRILL*
Ga0070711_1006281211	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRMALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMADDAGVDLAQARKLVALGCPLETASRILL*
Ga0070708_1015154251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRMALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDVVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0070708_1017785181	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAEHALSPGELDQADAADRTRVWRLDQFIGLGFDLVPASLMADDSRVDLAQARKLLALGCPLETASRILL*
Ga0070706_1014169251	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDDVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0070707_1011978052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWSLDQFIALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRILL*
Ga0070697_1014197861	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GGFGLEVDPHVVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL*
Ga0070704_1001542951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMADDAEVDLAQARKLVALG
Ga0066701_107458372	3300005552	Soil	MEEAEHALSPDEPDQADPADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL*
Ga0066692_101317072	3300005555	Soil	MEESEQALSPSELDQVDEVDWTQIWRLEQFLALGFDVVRASLMADDAEVDLAQARKLVTLGCPLETASRILL*
Ga0066692_108399182	3300005555	Soil	MDEAEQALSPGELDQADAADRTRVWRLDQFSALGFDGLRASLMADDSRVDLAQARKLLALGCPLETASRILL*
Ga0066700_106541542	3300005559	Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFTCLGFDPVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0068858_1010138052	3300005842	Switchgrass Rhizosphere	MALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDDVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0070717_108075112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EVDPHVVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL*
Ga0075417_107327491	3300006049	Populus Rhizosphere	MEEAEHALTPSEPDKADAADRTRVWRLDQFIDLGFDVARASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0070712_1002393092	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSRMAHGGFGLEVDPHVVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL*
Ga0070712_1011618112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EEAEQVLSPSELDQVDAPDETWIWRLEQFIALGFDAERASLMADDAGVDLAQAHKLAALGCPLETASRILL*
Ga0070712_1019178242	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GSGPEVDPHVVVEESEQTVSSVELDQADQVDWTQVWRLDQFQALGFDAARAWLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0066665_105834472	3300006796	Soil	MEEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDLVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0066665_115454532	3300006796	Soil	MSRMAHGVFSLEVDPQVVMEESEQAISSVELDQADEVDWTRVWRLDQFLVLGFDVVRASLMADDAGVDLAQARKLVALGCPLETASRILL*
Ga0075433_101227304	3300006852	Populus Rhizosphere	MEEAEHALTPSEPDKADASDRTRVWRLDQFIDLGFDVARASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0075436_1007707921	3300006914	Populus Rhizosphere	MEEAEHAFTPSEPDKADAADRTRVWRLDQFIDLGFDVARASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0075435_1004951303	3300007076	Populus Rhizosphere	AEHALTPSEPDKADAADRTRVWRLDQFIDLGFDVARASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0075435_1010513481	3300007076	Populus Rhizosphere	MEESEQALSQGELDQADAVDWTQVWRLDQFTALGFDAVRASLMADDARVDLAQARKLVALGCPLDTASRILL*
Ga0099795_102397261	3300007788	Vadose Zone Soil	MSRMAHGGFGLEVDPSCGMDESGQALSLGELDQPDEVDWTQVWRLDQFLALGFDVLRASLMADDARVDLAQARKLVALGCPLETALRILL*
Ga0099829_101925003	3300009038	Vadose Zone Soil	MEEAEHALSPDEPDQADTADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL*
Ga0099829_111432762	3300009038	Vadose Zone Soil	SGDRDSHNGWTNFRGSRHALQQGEHDQADAADRTRVWRLDQLIGLGFDVVRASLMANDSRVDLAQARKLVALGCPLDTASRILL*
Ga0099828_111184822	3300009089	Vadose Zone Soil	MEEAEHALAPGELDQADAADRTRVWRLDQFIDLGFDVVRAALMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0099827_102601481	3300009090	Vadose Zone Soil	MEEAEHALAPGELDQADAADRTRVWRLDQFIGLGFDLVPASLMADDSRVDLAQARKLVAL
Ga0099827_112109301	3300009090	Vadose Zone Soil	MEEAEHALSPGQLDQADAADRTRVWRLDQFIDLGFDVVRAALMADDSRVNLAQARKLVAL
Ga0099827_119760651	3300009090	Vadose Zone Soil	MEQAAQAFSLDQADPADRTRVWRLDQLIGLGFDAVRASLMADDLRVDLAQARKLVALGCPLETASRILL*
Ga0105245_109507012	3300009098	Miscanthus Rhizosphere	MALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRILL*
Ga0105245_127522282	3300009098	Miscanthus Rhizosphere	MALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDDVRASLMADDAGIDLAQARKLVALGCPL
Ga0105247_102959402	3300009101	Switchgrass Rhizosphere	MGESELALSPGELDQADAVDWTQLWRLDQFIALGFDVVRASLMADDAGIDLAQARKLVALGCPLETASRSLL*
Ga0066709_1009470562	3300009137	Grasslands Soil	MEEAEHALPPVELDQAVTADRTRVWRLDQLIDLGFDVVRASLMANDSRVDLAQARKLVALGCPLETASRILL*
Ga0066709_1010241751	3300009137	Grasslands Soil	MEEAEHALAPGELDQADAADRTRVWRLDQFIGLGFDVVRASLMADDSLVDLALARKLVALGCPLETASRILL*
Ga0127503_104482542	3300010154	Soil	MSRVAHCAFGLEVDPRAGMEESEQALSPGELDQADAVDWTQVWRHDQLLALGFDAVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0134063_105283261	3300010335	Grasslands Soil	RQALSSVELDQPDEVDWTQLWRLDQFLALGFDVLRASLMADDAGVDLAQARKLVALGCPLETASRILL*
Ga0134128_103892044	3300010373	Terrestrial Soil	MALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDDVRASLMADDAGIDLA
Ga0134126_103164452	3300010396	Terrestrial Soil	MALGGFGLEVDPHVVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL*
Ga0137392_109381051	3300011269	Vadose Zone Soil	MEDTEHALQQGEHDQADAADRTRVWRLDQLIGLGFDVVRASLMANDSRVDLAQARKLVALGCPLDTASRILL*
Ga0137391_115410651	3300011270	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIGLGFDLVPASLMADDSRVDLAQARKLVALGCPLETASHILL*
Ga0137393_108149802	3300011271	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIGLGFDLVPASLIADDSRVDLAQARKLVALGCPLETASRILL*
Ga0120146_10351262	3300011992	Permafrost	MRSRPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVALGCPLETASPAPGSVRTLD*
Ga0120118_11420732	3300012010	Permafrost	MEEGEHALAPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSLVDLAQARKLVALGCPLETASRILL*
Ga0120152_10585621	3300012011	Permafrost	VSASRAIPCGMEESKQALSPGELEQADEVDWTQVWRLDQFIALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
Ga0120152_10812201	3300012011	Permafrost	MEEAEHARSPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSLVDLAQARKLVALGCPLETASRILL*
Ga0120159_11170671	3300012014	Permafrost	MEEAEHALSPGELDQADAAGRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0120159_11650131	3300012014	Permafrost	MSRMAHGGFGLEVDPIGMEESEQALSSGEVDQADEVDWTQVWRLDQFIALGFDDVRASLMADDARGDLAQARKLIAL
Ga0137388_102021903	3300012189	Vadose Zone Soil	MEEAEHALPPVELNQADAADQTRVWRLDQLIDLGFDVVRASLMANDSRVDLAQARKLVALGCPLETASRILL*
Ga0137388_119059721	3300012189	Vadose Zone Soil	MLDQADAADRTRVWRLDQFIGLGFDLVPASLMADDSRVDLAQARKLVALGCPLETASHILL*
Ga0137364_104633961	3300012198	Vadose Zone Soil	MEESEQALSPGELDQVDEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLAALGCPLETASRILL*
Ga0137383_100195426	3300012199	Vadose Zone Soil	MAVSTWRSILGGMEESGQALSPAELDQADEVDWTQVWRLDQFLALGFDIVRASFMADDARVDLAQARKLVALGCPLETASRILL*
Ga0137382_102604312	3300012200	Vadose Zone Soil	MEESEQALSPSELDQVDEVDWTQIWRLEQFLALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRILL*
Ga0137382_103051282	3300012200	Vadose Zone Soil	MEESEQAPSPGELGQADAVDWTQVWRHDQFIALGFDDVRASLMADDAQVDLAQARKLVTLGCPLETASRILL*
Ga0137365_108448642	3300012201	Vadose Zone Soil	MDEAEQALSPGELDQADAADRTRVWRLDQFIALGFDALRASLMADDSRVDLAQARKLLALGCPLETASRILL*
Ga0137365_109396431	3300012201	Vadose Zone Soil	MAEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDLVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137365_110084101	3300012201	Vadose Zone Soil	MEESGQALSLGELDQPDEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0137374_101294662	3300012204	Vadose Zone Soil	MEEAEHALSPGELDKADATDRTRVWRLDQFIDLGFDLVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137374_110568412	3300012204	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIDLGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137380_102638762	3300012206	Vadose Zone Soil	MEEAQHALSPGDLDQADAPDGTRVWRHDQFIALGFDAVRASLMADDSRVDLGQARKLVALGCPLETASRILL*
Ga0137380_103316833	3300012206	Vadose Zone Soil	MEEAEHALPPVELDQADAADRTRVWRLDQLIDLGFDVVRASLMANDSRVDLAQARKLVALGCPLETASRILL*
Ga0137381_102853191	3300012207	Vadose Zone Soil	MDEAEQALSPGELDQADAADRTRVWRLDQFIDLGFDLVRASLMADDSRVDLAQARRLVALGCPLETASRILL*
Ga0137381_107800672	3300012207	Vadose Zone Soil	MDEAEQALSSGDHDQADAADRTNVWRLDQFIGLGFDAVRASLMADDSRVDLAQARKLLALGCPLETASRILL*
Ga0137381_111997012	3300012207	Vadose Zone Soil	MEEAQHALSPGDLDQADAPDGTRVWRHDQFIALGFDVVRASLMADDSRVDLGQARKLVALGCPLETASRILL*
Ga0137381_116537781	3300012207	Vadose Zone Soil	MDESEQALSPAELDQADEVDWTQVWRLDQFLTLGFDVVRASLMADDAEVDLAQARKLVALGCALETASRILL*
Ga0137376_100968113	3300012208	Vadose Zone Soil	MEESEQALSPGELDQVDEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLAALGCPLETASRLLL*
Ga0137379_114439441	3300012209	Vadose Zone Soil	MEEAEHALPPVELDQADAADRTRVWRLDQLIDLGFDVVRASLMANDSGVDLAQARKLVALGCPLETASRILL*
Ga0137379_117264671	3300012209	Vadose Zone Soil	MEEAEHALSPDELQEADAPDRTRVWRLDQFVGLGFDIVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137378_101431893	3300012210	Vadose Zone Soil	MEEAQHALSPGDLDQADAPDGTRVWRHDQFIALGFDVVRASLMADDSRVDLGQARKVVALGCPLETASRILL*
Ga0137378_108020012	3300012210	Vadose Zone Soil	MEESKQELSSGELDQPDEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0137378_109238401	3300012210	Vadose Zone Soil	MEETEHALSHGELDQADAADRTRVWRLDQLIGLGFDVVRASLMANDSRVDLAQARKLVALGCPLDTASRILL*
Ga0137377_100236548	3300012211	Vadose Zone Soil	MEESEQALSPSELDQVDEVDWTQVWRLDQFLALGFDVVRASLMADDAEVDLAQARKLVALGCALETASRILL*
Ga0137377_119572801	3300012211	Vadose Zone Soil	DQADAADRTRVWRLDQFIGLGFDAVRASLMADDSQVDLAQARKLLALGCPLETASRILL*
Ga0137377_119709461	3300012211	Vadose Zone Soil	MEESEQALSPSELDQVDEVDWTQIWRLEQFLALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRI
Ga0137387_108506212	3300012349	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVALGCPLETASRILR*
Ga0137387_109285851	3300012349	Vadose Zone Soil	MEEPQQALSPAELDQADEVDWTQVWRLDQFLALGFDVVRASFMADDARVDLAQARKLVALGCPLETASRILL*
Ga0137372_105986131	3300012350	Vadose Zone Soil	MAEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137372_108416951	3300012350	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIDLGFGLVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137367_103745741	3300012353	Vadose Zone Soil	MEEAEHALSPRELDQADAADRTRVWRLDQFIDLGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137366_112444581	3300012354	Vadose Zone Soil	MEESEQVLSSGELDQADEVDWTQVWRLDQFLALGFDVVRSSLMADDARVDLAQARKLVALGCPLETASCILL*
Ga0137371_100426471	3300012356	Vadose Zone Soil	MEEAEHALAPGELDQADAADRTRVWRLDQFIGLGFDVVRASLMADDLQVDLAQARKLVALGCPLETASRILL*
Ga0137371_102364562	3300012356	Vadose Zone Soil	MEEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137371_102639792	3300012356	Vadose Zone Soil	MSRMAHGSFGPEVDPHVVMEEPEQAISSVELDQAGEVDWTQVWRLDQFLALGFDVVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0137360_110718671	3300012361	Vadose Zone Soil	MEEAEHALPAVELNQADAADQTRVWRLDQLIDLGFDVVRASLMANDSRVDLAQARKLVALGCPLETASRILL*
Ga0137390_108745082	3300012363	Vadose Zone Soil	MEEAEHALSPGELDQADAADRTRVWRLDQFIGLGFDLVPASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137373_107451731	3300012532	Vadose Zone Soil	MEEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDLVQASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0137398_105876291	3300012683	Vadose Zone Soil	MSRMAHGGFGLEVDPSCGMDESGQALSLGELDQPDEVDWTQVWRLDQFLALGFDVLRASLMADDARVDLAQARKLVAL
Ga0137359_109755911	3300012923	Vadose Zone Soil	MEESEQALSPSELDQVDEVDWTQVWRLDQLLALGFDVVRASLMADDAEVDLAQARKLVALGCPLETASRILI*
Ga0137404_104068371	3300012929	Vadose Zone Soil	MEEAEHALAPGELNQADAANRTRVWRLDQFIGLGFDVVRASLMADDSLVDLAQARKLVALGCPLETASRILL*
Ga0164300_111751001	3300012951	Soil	MSRMAHGGFGLEVDPCVNMEESEQALSPGDLEQADEVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL*
Ga0164298_107776202	3300012955	Soil	MSRMADGGFGLEVDPCVNMEESEQALSSGELEQADEVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL*
Ga0164303_105266262	3300012957	Soil	MSRMAHGGFGLEVDPYVVMEESEQAISSVELDRPDAVDWTQVWRHDQFIALGFDAVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0164299_105606341	3300012958	Soil	MSRMAHGGFGLEVDPYVVMEESEQAISSVELDRPDAVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL*
Ga0164299_110632272	3300012958	Soil	MSRMAHDGCGPEVDPHVVMDESEQAPSPGELAQADAVDWTQVWRLDQFLALGFDDVPASLMADDAEVDLAQAR
Ga0164301_107005412	3300012960	Soil	MEESEQAPSPGELDQADGVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL*
Ga0164309_100571261	3300012984	Soil	MSRMAHGGFGLEVDPYVVMEESEQAISSVELDRPDAVDWTQVWRHEQLLALGFDVVRASLMADDPGVELAQARKLVALGCPLETASRILL*
Ga0164309_103723602	3300012984	Soil	MEESEQALSPGELDQADAVDWTQVWRHDQFIALGFDDVRASVMADDARVDLAQARKLVALGCPLETASSILL*
Ga0164309_117906801	3300012984	Soil	MSRMAHGGFGLEVDPHVVMEESEQAISTVELDQADEVDWTQVWRLDQFLALGFDVVRASLMADDAGVDLAQARKLVALGCPLETA
Ga0164308_101460942	3300012985	Soil	MSRMAHGGFGLEVDPYVVMEESEQAISSVELDRPDAVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLVALGCPLETASRILL*
Ga0164308_107971231	3300012985	Soil	VVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL*
Ga0164304_108847583	3300012986	Soil	VDPCVNMEESEQALSPGDLEQADEVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL*
Ga0164304_117521522	3300012986	Soil	MEESEQASSPGELDQADQVDWTQVWRHDQFIALGFDDVRASLMADDAQVDLAQARKLVTLGCPLETASRILL*
Ga0164307_112895921	3300012987	Soil	MEESEQAPSPGELDQADGVDWTQVWRHDQFIALGFDAVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0164305_104671641	3300012989	Soil	MSRMAHGGFGLEVDPCVNMEESEQALSPGDLEQADEVDWTQVWRHEQLLALGFDVVRASLMADDPGVELAQARKLVALGCPLETASRILL*
Ga0164305_113820092	3300012989	Soil	MEESEQALSPGELDQADAVDWTQVWRHDQFIALGFDTVRASLMADDARVDLAQARKLVALGCPLETASRILL*
Ga0157369_124187912	3300013105	Corn Rhizosphere	MALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDVVRASLMADDAGIDLAQARKLVALGCPLETASRILL*
Ga0120150_10468391	3300013294	Permafrost	MSRMAHGGFGLEVDPIGMEESEQALSSGEVDQADEVDWTQVWRLEQFLALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
Ga0120111_11555011	3300013764	Permafrost	MEEAEHARSPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLLALGCPLETASRILL*
Ga0120172_11451931	3300013765	Permafrost	GMEETEHALSPSDLDQADAPDATRVWRHDQFIALGFDVVRASLMADDSRVDLGQARKLVALGCPLETASRILL*
Ga0120155_10320472	3300013768	Permafrost	MSRMAHGGFGLEVDPIGMEESEQALSSGEVDQADEVDWTQVWRLDQFIALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
Ga0120158_100012201	3300013772	Permafrost	MEETEHALSPSDLDQADAPDATRVWRHDQFIALGFDVVRASLMADDSRVDLGQARKLVALGCPLETASRILL*
Ga0120158_1000557514	3300013772	Permafrost	MEESEQALSPGELDQADEVDWTQVWRLDQFIALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
Ga0134075_104990221	3300014154	Grasslands Soil	MEEAEHALSSGEVDQADATDRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVAAGCPLETASRILL*
Ga0120171_10372072	3300014827	Permafrost	MEESKQALSPGELDQADEVDWTQVWRLDQFIALGFDDVRASLMADDARVDLAQARKLIALGCPLETASRILL*
Ga0120171_10780771	3300014827	Permafrost	MRSRPGELDQADAADRTRVWRLDQFIDLGFDVVRASLMADDSRVDLAQARKLVALGCPLETASRILL*
Ga0157379_108532282	3300014968	Switchgrass Rhizosphere	MSRMAHDGCGLGVDPHVVMEESEQAPSPGELAQADAVDWTQVWRHDQFIALGFDDVRASLMADDAQVDL
Ga0187775_101599312	3300017939	Tropical Peatland	MDEAEQVLSPDELDQADVPDETWIWRLDQFVALGFGVERAMLLADDSRVDLAQARKLVALGCPVETASRILL
Ga0187776_103477132	3300017966	Tropical Peatland	MSAYARRPMLDADMDEAEQVLSPDELDQADVPDETWIWRLDQFVALGFGVERAMLLADDSRVDLAQARKLVALGCPVETASRILL
Ga0184619_100825211	3300018061	Groundwater Sediment	MEEAEHARSPGELDQADAEDRTRVWRLDQFIGLGFDVVQASLMADDSRVDLAQARKLLALGCPLETASRILL
Ga0066662_113772961	3300018468	Grasslands Soil	MEEAEHTLSPDEPDQADTADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL
Ga0193723_11632231	3300019879	Soil	ALGGFGLEVDPHVVMEESEQALSPGELDQADEVDWTQVWRLDQFFALGFDVARASLMADDAGVDLAQARKLVALGCPLETASRILL
Ga0193751_10211834	3300019888	Soil	MEEAEHAPSPGEVDQADAADRTRDWRLDQFIGLGFDVVRASLMADDALVDLAQARKLVARGCPLETASRILL
Ga0193751_10900152	3300019888	Soil	MEEAEHARSPGELDQADAADRTRVWRLDQFIGLGFDVVRASLMADDSRVDLAQARKLLALGCPLETASRILL
Ga0210382_101656571	3300021080	Groundwater Sediment	MEEAEHARSPGELDQADAEDRTRVWRLDQFIGLGFDVVRASLMADDSRVDLAQARKLLALGCPLETASRILL
Ga0193719_102343112	3300021344	Soil	MEEAEHALSPGELDQADATDRTRVWRLDQFIDLGFDLVRASLMADDSRVDLAQARKLVALGCPLETASRILL
Ga0193699_101946242	3300021363	Soil	MEEAERALSPGELDQADAADRTRVWRLDQFIDLGFDLVRAALMADDSRVDLAQARKLVALGCPLETASRILL
Ga0207692_107849611	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RMAHGGFGLEVDPHVVMEESEQALSSVELDQPDEVDWTQVWRLDQFLALGFDVVRSSLMADDPGVDLAQARKLVALGCPLETASRILL
Ga0207685_108648682	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ALSPGDLEQADEVDWTQVWRHEQLLALGFDVVRSSLMADDPAVDLAQARKLIALGCPLETASRILL
Ga0207663_108468931	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSRMALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMADDAEVD
Ga0207646_111133471	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRMALGGFGLEVDPKGGMEESEQALSPGELDQADAVDWTQLWRLDQFIALGFDDVRASLMADDAGIDLAQARKLVAL
Ga0207700_100895441	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LPAGEMSRMALGGFGLEVDPRGGMEESEQALSPRDLDQADAVDWTQVWRLDQFIALGFDVVRASLMAD
Ga0209237_11374201	3300026297	Grasslands Soil	MEEAEHALSPDEPDQADPADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVAL
Ga0209690_13094371	3300026524	Soil	MEEAEHALSPDEPDQADPADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL
Ga0209701_102201082	3300027862	Vadose Zone Soil	MEEAEHALPPVELNQADAADQTRVWRLDQIIDLGFDVVRASLMANDSRVDLAQARKLVALGCPLETASRILL
Ga0209283_102741782	3300027875	Vadose Zone Soil	MEEAEHALSPDEPDQADTADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL
Ga0209590_101994391	3300027882	Vadose Zone Soil	MEEAEHALAPGELDQADAADRTRVWRLDQFIDLGFDVVPASLMADDSGVDLAQARKLVALGCPLETASRILL
Ga0307497_101165471	3300031226	Soil	MAHVGFGLEVDPHVVMEESGQAISSVELDQADEVDWTQVWRLDQFLVLGFDVARASLMAYDTRVDLAQARKLVGLGCPLETAS
Ga0307506_105385692	3300031366	Soil	MAHGGFGLEVDPSCGMDESGQALSLGELDQPDEVDWTQVWRLDQFLALGFDVLRASLMADDARVDLAQARKLV
Ga0308175_1000068216	3300031938	Soil	MAGSAWRSILMCMEEPEQALSPAKLDLADEVDWTQVWRLDQFLALGFDVVRASFMANDAGVDLAQARKLVALGCPLETASRILL
Ga0308176_100045629	3300031996	Soil	MCMEEPEQALSPAKLDLADEVDWTQVWRLDQFLALGFDVVRASFMANDAGVDLAQARKLVALGCPLETASRILL
Ga0307472_1005091813	3300032205	Hardwood Forest Soil	MEEAEQVLSPSELDQVDAPDETWIWRLEQFIALGFDAERASLMADDAGVDLAQARKLAALGCPLETASRILL
Ga0335080_104440492	3300032828	Soil	MEEAEQVLSPSELDQAEAPNETWFWRLDQFIALGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL
Ga0335077_113851461	3300033158	Soil	GPPILEADMEEAEQVLSPSELDQAEAPNETWFWRLDQFIALGFDAVRASLMADDSRVDLAQARKLVALGCPLETASRILL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences