Metagenome Family F045911

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045911
Family Type	Metagenome
Number of Sequences	152
Average Sequence Length	62 residues
Representative Sequence	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Number of Associated Samples	116
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.44 %
% of genes near scaffold ends (potentially truncated)	20.39 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.947 % of family members)
Environment Ontology (ENVO)	Unclassified (32.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.526 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.82% β-sheet: 0.00% Coil/Unstructured: 68.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF09900	DUF2127	5.92
PF01192	RNA_pol_Rpb6	5.26
PF02661	Fic	3.95
PF01471	PG_binding_1	3.95
PF06736	TMEM175	1.97
PF00498	FHA	1.32
PF12867	DinB_2	1.32
PF00701	DHDPS	1.32
PF03098	An_peroxidase	1.32
PF01451	LMWPc	1.32
PF03681	Obsolete Pfam Family	1.32
PF10543	ORF6N	1.32
PF07927	HicA_toxin	0.66
PF00737	PsbH	0.66
PF09720	Unstab_antitox	0.66
PF05990	DUF900	0.66
PF10049	DUF2283	0.66
PF04173	DoxD	0.66
PF12575	Pox_EPC_I2-L1	0.66
PF03136	Pup_ligase	0.66
PF00230	MIP	0.66
PF09907	HigB_toxin	0.66
PF12730	ABC2_membrane_4	0.66
PF05226	CHASE2	0.66
PF04228	Zn_peptidase	0.66
PF11752	DUF3309	0.66
PF05635	23S_rRNA_IVP	0.66
PF04365	BrnT_toxin	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	5.26
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	2.63
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.97
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.66
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.66
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.66
COG2321	Predicted metalloprotease	General function prediction only [R]	0.66
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.66
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.66
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	62.50 %
Unclassified	root	N/A	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	62.50 %
Unclassified	root	N/A	12.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	44.74 %
Unclassified	root	N/A	12.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.29 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.32 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.66 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.74 %
Unclassified	root	N/A	12.50 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	3.29 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.32 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.66 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.74 %
Unclassified	root	N/A	12.50 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	3.29 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.32 %
unclassified Candidatus Kentron	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron → unclassified Candidatus Kentron	0.66 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.74 %
Unclassified	root	N/A	12.50 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	3.29 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.66 %
Candidatus Kentron sp. LFY	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron → unclassified Candidatus Kentron → Candidatus Kentron sp. LFY	0.66 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.74 %
Unclassified	root	N/A	12.50 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	3.29 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.66 %
Candidatus Kentron sp. LFY	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron → unclassified Candidatus Kentron → Candidatus Kentron sp. LFY	0.66 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01AYAKT	Not Available	535	Open in IMG/M
2088090014\|GPIPI_17273144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2156	Open in IMG/M
2088090014\|GPIPI_17307454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300000559\|F14TC_100306137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1445	Open in IMG/M
3300000787\|JGI11643J11755_11766505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300000881\|JGI10215J12807_1042352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1875	Open in IMG/M
3300000956\|JGI10216J12902_100393679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	744	Open in IMG/M
3300000956\|JGI10216J12902_103672320	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300000956\|JGI10216J12902_110664099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300000956\|JGI10216J12902_114059618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300000956\|JGI10216J12902_119523333	Not Available	1198	Open in IMG/M
3300001431\|F14TB_104626618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300002557\|JGI25381J37097_1006586	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300002568\|C688J35102_117831627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	509	Open in IMG/M
3300002568\|C688J35102_120136376	Not Available	895	Open in IMG/M
3300002896\|JGI24802J43972_1013674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	619	Open in IMG/M
3300002899\|JGIcombinedJ43975_10005280	Not Available	2093	Open in IMG/M
3300003911\|JGI25405J52794_10102255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	640	Open in IMG/M
3300004016\|Ga0058689_10054533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300004114\|Ga0062593_101226851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300004156\|Ga0062589_100190920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1465	Open in IMG/M
3300004156\|Ga0062589_101874313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300004463\|Ga0063356_104055251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300004480\|Ga0062592_101881080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300004643\|Ga0062591_100939223	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005093\|Ga0062594_101590622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	676	Open in IMG/M
3300005174\|Ga0066680_10519627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300005175\|Ga0066673_10404497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300005175\|Ga0066673_10604899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	638	Open in IMG/M
3300005176\|Ga0066679_10115326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1649	Open in IMG/M
3300005179\|Ga0066684_10542795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300005181\|Ga0066678_10102867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1732	Open in IMG/M
3300005184\|Ga0066671_11000478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	526	Open in IMG/M
3300005186\|Ga0066676_10328950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1017	Open in IMG/M
3300005332\|Ga0066388_100039847	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
3300005332\|Ga0066388_100074272	All Organisms → cellular organisms → Bacteria	3727	Open in IMG/M
3300005332\|Ga0066388_100669796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1649	Open in IMG/M
3300005332\|Ga0066388_101079426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1356	Open in IMG/M
3300005335\|Ga0070666_11367907	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005340\|Ga0070689_100936045	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300005451\|Ga0066681_10153303	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300005451\|Ga0066681_10308497	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005454\|Ga0066687_10011590	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300005454\|Ga0066687_10033390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2289	Open in IMG/M
3300005529\|Ga0070741_10040503	All Organisms → cellular organisms → Bacteria	6028	Open in IMG/M
3300005529\|Ga0070741_11720578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300005535\|Ga0070684_102135787	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300005540\|Ga0066697_10413329	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005552\|Ga0066701_10663822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005556\|Ga0066707_10619377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300005559\|Ga0066700_10467281	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005560\|Ga0066670_11002091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005561\|Ga0066699_10901119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	617	Open in IMG/M
3300005561\|Ga0066699_11009837	Not Available	576	Open in IMG/M
3300005568\|Ga0066703_10078462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1906	Open in IMG/M
3300005574\|Ga0066694_10224067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300005577\|Ga0068857_101846759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	592	Open in IMG/M
3300005587\|Ga0066654_10017163	All Organisms → cellular organisms → Bacteria	2833	Open in IMG/M
3300005587\|Ga0066654_10603140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300005713\|Ga0066905_100064089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2328	Open in IMG/M
3300005764\|Ga0066903_100373228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2325	Open in IMG/M
3300005764\|Ga0066903_106348255	Not Available	617	Open in IMG/M
3300005937\|Ga0081455_10138438	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300005937\|Ga0081455_10647602	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300005937\|Ga0081455_10691896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300006031\|Ga0066651_10626605	Not Available	573	Open in IMG/M
3300006046\|Ga0066652_100085493	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300006175\|Ga0070712_100478537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	1041	Open in IMG/M
3300006175\|Ga0070712_100527292	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300006791\|Ga0066653_10216957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	972	Open in IMG/M
3300006794\|Ga0066658_10155788	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300006797\|Ga0066659_10870071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300006800\|Ga0066660_10876562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	731	Open in IMG/M
3300006804\|Ga0079221_10969280	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006954\|Ga0079219_10374964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	928	Open in IMG/M
3300009100\|Ga0075418_10295288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1727	Open in IMG/M
3300010041\|Ga0126312_10264844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1209	Open in IMG/M
3300010043\|Ga0126380_11701872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300010048\|Ga0126373_10950325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	924	Open in IMG/M
3300010325\|Ga0134064_10161727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300010325\|Ga0134064_10202756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300010366\|Ga0126379_10884799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	995	Open in IMG/M
3300010371\|Ga0134125_12839487	Not Available	526	Open in IMG/M
3300010375\|Ga0105239_11319801	Not Available	832	Open in IMG/M
3300010398\|Ga0126383_12428043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	609	Open in IMG/M
3300012198\|Ga0137364_10384365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1049	Open in IMG/M
3300012198\|Ga0137364_10807791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	709	Open in IMG/M
3300012198\|Ga0137364_10933123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	657	Open in IMG/M
3300012198\|Ga0137364_10989818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	636	Open in IMG/M
3300012200\|Ga0137382_10813592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300012201\|Ga0137365_10734710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300012202\|Ga0137363_10401303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1142	Open in IMG/M
3300012208\|Ga0137376_10967676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300012212\|Ga0150985_119357728	Not Available	1599	Open in IMG/M
3300012212\|Ga0150985_119692146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300012362\|Ga0137361_10075681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2865	Open in IMG/M
3300012362\|Ga0137361_11306891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300012469\|Ga0150984_104753048	Not Available	515	Open in IMG/M
3300012923\|Ga0137359_10785980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300012923\|Ga0137359_10841611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300012929\|Ga0137404_10012955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5831	Open in IMG/M
3300012929\|Ga0137404_10043699	All Organisms → cellular organisms → Bacteria	3395	Open in IMG/M
3300013096\|Ga0157307_1140117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300013096\|Ga0157307_1169827	Not Available	521	Open in IMG/M
3300013296\|Ga0157374_10161196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2184	Open in IMG/M
3300013306\|Ga0163162_10399274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1507	Open in IMG/M
3300013308\|Ga0157375_10548441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1318	Open in IMG/M
3300015357\|Ga0134072_10113979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	848	Open in IMG/M
3300015371\|Ga0132258_10934973	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300015372\|Ga0132256_103568251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	523	Open in IMG/M
3300017657\|Ga0134074_1282786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300018000\|Ga0184604_10001663	All Organisms → cellular organisms → Bacteria	3286	Open in IMG/M
3300018028\|Ga0184608_10160731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300018054\|Ga0184621_10025212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1862	Open in IMG/M
3300018061\|Ga0184619_10234823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	843	Open in IMG/M
3300018072\|Ga0184635_10330122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300018081\|Ga0184625_10500042	Not Available	614	Open in IMG/M
3300018081\|Ga0184625_10570145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300018431\|Ga0066655_10126540	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018431\|Ga0066655_10416549	Not Available	886	Open in IMG/M
3300018431\|Ga0066655_10792751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300018433\|Ga0066667_11406096	Not Available	613	Open in IMG/M
3300018468\|Ga0066662_10277525	Not Available	1391	Open in IMG/M
3300018482\|Ga0066669_10185221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1575	Open in IMG/M
3300019866\|Ga0193756_1024465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300019879\|Ga0193723_1041290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300019885\|Ga0193747_1021602	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300020006\|Ga0193735_1090446	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300020012\|Ga0193732_1042969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300020012\|Ga0193732_1046268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M
3300021080\|Ga0210382_10214446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300021362\|Ga0213882_10291366	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300021413\|Ga0193750_1022134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1508	Open in IMG/M
3300022694\|Ga0222623_10075565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1306	Open in IMG/M
3300022756\|Ga0222622_10044285	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300022756\|Ga0222622_10319449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1074	Open in IMG/M
3300025315\|Ga0207697_10034648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2066	Open in IMG/M
3300025923\|Ga0207681_10935789	Not Available	726	Open in IMG/M
3300026308\|Ga0209265_1117594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300026308\|Ga0209265_1155706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300026316\|Ga0209155_1081902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1203	Open in IMG/M
3300026317\|Ga0209154_1302130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300026325\|Ga0209152_10110063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300026528\|Ga0209378_1219480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300026542\|Ga0209805_1071831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1683	Open in IMG/M
3300026548\|Ga0209161_10171888	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300026550\|Ga0209474_10657318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300028715\|Ga0307313_10121691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300028878\|Ga0307278_10507016	Not Available	527	Open in IMG/M
3300031716\|Ga0310813_11924812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300032180\|Ga0307471_101450147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron → unclassified Candidatus Kentron → Candidatus Kentron sp. LFY	846	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.84%
Host-Associated	Host-Associated	13.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.61%
Plants	Host-Associated → Plants	13.16%
Aquatic	Environmental → Aquatic	7.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.24%
Sediment	Environmental → Aquatic → Sediment	6.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.66%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.11%
Loam	Environmental → Terrestrial → Soil → Loam	11.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.66%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.66%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.66%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.66%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.66%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.66%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_4261930	2040502001	Soil	MANNNNGGGGGGPAVVGIVVIFIIVVAAVAFFVMGGGQMFNGGGTKKVDVNVKAPAVPTKSP
GPIPI_01529260	2088090014	Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNVKAPAEPGKVVPSKSP
GPIPI_02984120	2088090014	Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFLGGSGGGTKKVDVNVKAPAEPGKVVPSKSP
F14TC_1003061372	3300000559	Soil	MDFTAGDNGGGSNAAVVAIFVIFLIIVAAALFFFGGQFFGGGSETKKVDVNVKAPAVTGKAVPGKSP*
JGI11643J11755_117665052	3300000787	Soil	MADNNGSGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGSGGTKKVDVNIKAPAEPGKVVPSKSP*
JGI10215J12807_10423522	3300000881	Soil	MADNNGGGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGSGGTKKVDVNIKAPAEPGKVVPSKSP*
JGI10216J12902_1003936791	3300000956	Soil	MITADNNRAGEGSNAAVVAIFVIFVIIVAALLFMYGGQFFGGGSQTKKVDVNVKAPAVEPGKVVPSKSP*
JGI10216J12902_1036723202	3300000956	Soil	NGGGSNAAVVAIFVIFIIVVAAALFFFGGQFFGGGSGGTKKVDVNVKAPAEPGKVVPSKSP*
JGI10216J12902_1106640992	3300000956	Soil	MADNNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFAGSGGETKKVDVNVKAPASEPGKVVPSKSP*
JGI10216J12902_1140596182	3300000956	Soil	NAAVVAIFVIFVIIVAAALFMFGGQFFGGGGSTKKVDVNVKAPAVEPGKAVPGKSP*
JGI10216J12902_1195233332	3300000956	Soil	MADNNGGGSSAAVVAIFVIFLIVVAAAAFFFFGGQFSGGGRDTKKVDVNIKAPAVPSKSP
F14TB_1046266182	3300001431	Soil	MADNNGGGSSAAVVAIFVIFVIIVAAALFMFGGQFFGGGGASGSKKVDVDIKAPAVPSKSP*
JGI25381J37097_10065863	3300002557	Grasslands Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP*
C688J35102_1178316272	3300002568	Soil	GGNAAVVAMFIIFVIIIGAVLFFFGGQWFGNGGSTKKVDVNVSAPAKPGKP*
C688J35102_1201363761	3300002568	Soil	MANGNGGGSSAAVVAIFVIFLIIVAAVLFFLFGGQFSGGGSQTKKVDVNVHAPAVPS
JGI24802J43972_10136742	3300002896	Soil	MADNNGSGSNAAVVAIFVIFVIIVAAALFFFGGQFFGSGGTTKKVDVNVKAPAVEPGKVVPSKSP*
JGIcombinedJ43975_100052805	3300002899	Soil	MADNNGGGSSAAVVAIFVIFVIIVAAAAFFFFGGHFGGSGGESKKVDVNIKAPAVPSKSP
JGI25405J52794_101022551	3300003911	Tabebuia Heterophylla Rhizosphere	MADSNGGGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGGSSTKKVDVNIKAPSVEPGKVAPSKSP*
Ga0058689_100545331	3300004016	Agave	MGDNKGGGSSAAVVAIVVIFVIVAAAAAFFIFGGQFGGGSETKKVDVNVKAPAVPSKSP*
Ga0062593_1012268511	3300004114	Soil	MAGDNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGGGETKKVDVNVKAPAEPGKVVPGKSP*
Ga0062589_1001909202	3300004156	Soil	MADNNGGGNNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKVVPSKSP*
Ga0062589_1018743131	3300004156	Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGSGGGTKKVDVNVKAPAEPGKVVPSKSP*
Ga0063356_1040552511	3300004463	Arabidopsis Thaliana Rhizosphere	MADNNGGGSSAAVVAIFVIFVIIIAAAAFFFFGGHFGGSGGETKKVDVNVSAPAVPSKSP
Ga0062592_1018810801	3300004480	Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFLGGSGGGTKKVDVNVKAPAEPGKVVPSKSP*
Ga0062591_1009392231	3300004643	Soil	MADNNGGGGNAAVVAIVVIFVIVIAAALFFFGGFFGGGGASGTKKVDVDIKAPAVPSKSP
Ga0062594_1015906221	3300005093	Soil	MADNNGGGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGGGGTKKVDVNVKAPAEPGKVVPGKSP*
Ga0066680_105196271	3300005174	Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAV
Ga0066673_104044971	3300005175	Soil	MADNNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0066673_106048991	3300005175	Soil	MADNNSGGSGGPAVVAIVVIFVLVAAVALFMFGGQLFNSGGGTKKVDVNVKAPVPTKSP*
Ga0066679_101153262	3300005176	Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGHFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0066684_105427951	3300005179	Soil	MDFMADNNSGGGSSAAVVAIFVIFVIIVAAALFFFGGQFFGGSGETKKVDVNVKAPAEPGKVVPSKSP*
Ga0066678_101028672	3300005181	Soil	MAYNNSGNGSSAAVVAILVIFLIIIAAVVFFFGGQFVGGGGQTKKVDVNVKAPAVPGKSP
Ga0066671_110004781	3300005184	Soil	MGDDKGGGSNAAVVAIVVIFVIVIAAAIFMFGGQFFGGGGETKKVDVNVKAPAVPGKSP*
Ga0066676_103289501	3300005186	Soil	MAEHNSRSNVAVVAILGIFVIIVAAALFIFSGKFFGGGGDSKKADVNVQAPALPGKAAPGKSP*R
Ga0066388_1000398477	3300005332	Tropical Forest Soil	MADDNGGGSNAAVVAIFVIFVIIVAAALFFFFGGQFFGGSGGGETKKVDVNIKAPAVPSKSP*
Ga0066388_1000742723	3300005332	Tropical Forest Soil	MADNNNGAGSNAAVVAIFVIIVAAALFFFGGQFVGSGGQTRKVDINVKAPAAEPGKVVPSKSP*
Ga0066388_1006697962	3300005332	Tropical Forest Soil	MTHKGGIRFIADSNGGGSNAAVVAIFVIFVIVVAAALFFFGGQFVGSGGQTKKVDVNIKAPAAEPGKVVPSKSP*
Ga0066388_1010794264	3300005332	Tropical Forest Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0070666_113679071	3300005335	Switchgrass Rhizosphere	LLWLINGGEGGNAAVVAICLIFVIIAGAVLFLFGGQWFGGSATRRVDLNISARAKPAKS*
Ga0070689_1009360452	3300005340	Switchgrass Rhizosphere	MADNNGGGSNAAVVAIFVIFIIIVAAAIFMFGGQFFGGSGGGTKKVDVNIKAPAEPAKVVPSKSP*
Ga0066681_101533031	3300005451	Soil	MADNNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVAPSKSP*
Ga0066681_103084972	3300005451	Soil	MANDNGGSSAAVVAIFVIFLIVIAAVLFFMFGGQFSGGGSQTKKVDVNVHAPAVPSKSP*
Ga0066687_100115902	3300005454	Soil	MADSNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0066687_100333903	3300005454	Soil	MADNNSGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSSGGTKKVDVNVKAPAVPSKSP
Ga0070741_100405037	3300005529	Surface Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGSGGGTKKVDVNVKAPAVEPGKVVPSKSP*
Ga0070741_117205781	3300005529	Surface Soil	MADSNSGGSNAAVVAIFVIFVIIVIAAIFLFGGQFFGGGSSSKKVDINVKAPSVEPGKAVPSKSP*
Ga0070684_1021357871	3300005535	Corn Rhizosphere	NAAVVAIFVIFIIIVAAAIFMFGGQFFGGSGGGTKKVDVNIKAPAEPAKVVPSKSP*
Ga0066697_104133291	3300005540	Soil	MAEHNSRSNVAVVAILGIFVIIVAAALFIFSGKFFGGGGDSKKADVNVQAPALPGKAAPGKSP*
Ga0066701_106638222	3300005552	Soil	MADNNSGGGSNAAVVAIFVIFLIIIAAALFFFGGQFVGGGGGTKKVDVNVKAPAVPSKSP
Ga0066707_106193772	3300005556	Soil	YNNSGNGSSAAVVAILVIFLIIIAAVVFFFGGQFVGGGGQTKKVDVNVKAPAVPGKSP*
Ga0066700_104672812	3300005559	Soil	MADNNSGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0066670_110020911	3300005560	Soil	MANGNGGGSSAAVVAIFVIFLIIVAAVLFFLFGGQFSGGGSQTKKVDVNVHAPAVPSKSP
Ga0066699_109011191	3300005561	Soil	MGDDKGGGSNAAVVAIVVIFLVVVAAAFFIFGGHFFGGGGETKKVDVNVKAPAVPGKSP*
Ga0066699_110098372	3300005561	Soil	MADDKGGGGGPAVVAIVVIFLVVVAVALFMFGGQFFGGGHSNSKKVDVNVNAPVPTKSP*
Ga0066703_100784623	3300005568	Soil	MADSNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSRGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0066694_102240671	3300005574	Soil	NNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0068857_1018467591	3300005577	Corn Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSTGGTKKVDVNVKAPAEPGKVVPSKSP*
Ga0066654_100171636	3300005587	Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVASKSP*
Ga0066654_106031401	3300005587	Soil	MANGNGGGSSAAVVAIFVIFVIIVAAVLFFLFGGQFSGGGSQTKKVDVNVHAPAVPSKSP
Ga0066905_1000640893	3300005713	Tropical Forest Soil	MADNNGGGSNAAVVAIFVIFVIVVAAALFFFGGQFVGSGGQTKKVDVNVKAPAAEPGKVVPSKSP*
Ga0066903_1003732284	3300005764	Tropical Forest Soil	MADNNGGGSSAAVVAIFVIFLIVVAAAVFFFFGGQFGGGRGETKKIDVNIKAPAVPSKSP
Ga0066903_1063482552	3300005764	Tropical Forest Soil	MADNNGGGSNAAVVAIFVIFVIIVAGALFFFGGQFFGGSGGGTKKVDVNVHAPAVPSKSP
Ga0081455_101384384	3300005937	Tabebuia Heterophylla Rhizosphere	MIKVDKNSAGEGSNAAVVAIFVIFLIIVIAALFMFGGQFFGGSSTKKVDVNVKAPAVEPAKAVPSKSP*
Ga0081455_106476021	3300005937	Tabebuia Heterophylla Rhizosphere	MADSNGGGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGSGSTTKKVDVNVKAPAVEPAKAVPSKSP*
Ga0081455_106918962	3300005937	Tabebuia Heterophylla Rhizosphere	MADSNGSGSNAAVVAIFVIFVIIVIAAVFIFSGQFGGGSSTKKVDVNVKAPSVEPGKVVPSKSP*
Ga0066651_106266051	3300006031	Soil	MADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGGGGTKKVDVNVKA
Ga0066652_1000854933	3300006046	Soil	MADDNGGGSNAAVVAIFVIFLIIVAAALFFFGGQFIGGGTQTKKVDVNVKAPAVPGKSP*
Ga0070712_1004785371	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFIGHGGETKKVDVNIKAPAVPSKSP*
Ga0070712_1005272922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADNNGGGSNAAVVAIFVIFIIIVAAAIFMFGGQFFGGNGGGTKKVDVNIKAPAEPAKVVPSKSP*
Ga0066653_102169571	3300006791	Soil	SNAAVVAIFVIFLIIVAAAIFFFSGQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0066658_101557881	3300006794	Soil	MADDKGGGGGPAVVAIVVIFLVVVAVTLFMFGGQFFGGGQSKKVDVNVKAPVPTKSP*
Ga0066659_108700711	3300006797	Soil	MADSNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSRGETKKVDVNVKAPAVPGKSP*
Ga0066660_108765622	3300006800	Soil	MADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSSGGTKKVDVNVKAPAVPSKSP
Ga0079221_109692802	3300006804	Agricultural Soil	MANNNGGGSGGPAVVAIVVIFLIVAAVALFMFGGQLFNGGGTKKVDVNVKAPVPTSSP*
Ga0079219_103749642	3300006954	Agricultural Soil	MADNNGGGSNAAVVAIFVIFVIIVAAVLFMFGGQFFGGGGGPKKVDVNVKAPAVEPGKVVPSKSP*
Ga0075418_102952881	3300009100	Populus Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAVLFFFGGQFFGSSGTTKKVDVNVKAPAAEPGKVVPSKSP*
Ga0126312_102648442	3300010041	Serpentine Soil	MADDNGGGSNAAVVAIFVIFLIIVAAALFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0126380_117018722	3300010043	Tropical Forest Soil	MSSKRRIDFMADNNGGGSNAAVVAIFVIFVIIVAAALFFFGGQFFGGNAGGTKKVDVNVKAPAAEPGKVVPSKSP*
Ga0126373_109503253	3300010048	Tropical Forest Soil	DNNGGGSNAAVVAIFVIFVIIVAAALFFFFGGQFFGGSGGGETKKVDVNIKAPAVPSKSP
Ga0134064_101617272	3300010325	Grasslands Soil	MDFMADNNSGGGSSAAVVAIFVIFVIIVAAALFFFGGQFFGGGGETKKVDVNVKAPAEPGKVVPSKSP*
Ga0134064_102027561	3300010325	Grasslands Soil	FMPDNNSGAGSNAAVVAIFVIFIIIVTAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVAPSKSP*
Ga0126379_108847991	3300010366	Tropical Forest Soil	MADNNNGAGSNAAVVAIFVIFVISVAAALFFFGGQFVGSGGQTRKVDINVKAPAAEPGKVVPSKSP*
Ga0134125_128394872	3300010371	Terrestrial Soil	MADNSSSGGGGNAAVVAIFVIFVIIVAVVLFAFGGKWFGSGGETKKVDVNISAPAKPGKP
Ga0105239_113198011	3300010375	Corn Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVIAAVFMFGGQFFGGSGGTKKVDVNIKAPAEPGKVVPSKSPLTSITS*
Ga0126383_124280432	3300010398	Tropical Forest Soil	EGSNAAVVAIFVIFLIVVAAVLFFFGGQFVGSGGQTKKVDVNVKAPAAEPGKVVPSKSP*
Ga0137364_103843651	3300012198	Vadose Zone Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAGGTKKVDVNVKAPAEPGKVVPAKSP*
Ga0137364_108077912	3300012198	Vadose Zone Soil	VADDNGGGSNAAVVAIFVIFLIIVAGAIFFFGSQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0137364_109331231	3300012198	Vadose Zone Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGSQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0137364_109898181	3300012198	Vadose Zone Soil	ADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0137382_108135921	3300012200	Vadose Zone Soil	MDFMADNNSGGGSSAAVVAIFVIFVIIVAAALFFFGGQFFGGGGGETKKVDVNVKAPAEPGKVVPSKSP*
Ga0137365_107347101	3300012201	Vadose Zone Soil	MADGNGGSSGGSIIVAAALFIFGGQFFGGGGGTKKVDVNVNPPAA
Ga0137363_104013032	3300012202	Vadose Zone Soil	MADNNSGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVVPSKTP*
Ga0137376_109676761	3300012208	Vadose Zone Soil	MDFMADNNSGGGSSAAVVAIFVIFVIIVAAALFFFGGQFFGGGGGETKKVDINVKAPAEPGKVVPSKSP*
Ga0150985_1193577281	3300012212	Avena Fatua Rhizosphere	MADNGGGGNAAVVAMFIIFVIIIGAVLFFFGGQWFGNGGSTKKVDVNVSAPAKPGKP*
Ga0150985_1196921461	3300012212	Avena Fatua Rhizosphere	RRIDFMANGNGGGSSAAVVAIFVIFLIIVAAVLFFLFGGQFSGGGSQTKKVDVNVHAPAVPSKSP*
Ga0137361_100520901	3300012362	Vadose Zone Soil	MSPTQSPNTITSPTKSESSGHKGGTDFMADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSSGGTKKVDVNVKAPAVPSKSP*
Ga0137361_100756815	3300012362	Vadose Zone Soil	MADDNGGGSNAAVVAIFVTFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0137361_113068911	3300012362	Vadose Zone Soil	MADNNSGGGSNAAVVAIFVIFLIIVAAALFFFFGGQFGGRGETKKVDVNVKAPAVPGKSP
Ga0150984_1047530481	3300012469	Avena Fatua Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAVGTKKVDVNVKAPAEPGKVVPAKSP*
Ga0137359_107859802	3300012923	Vadose Zone Soil	VADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP*
Ga0137359_108416112	3300012923	Vadose Zone Soil	MADNNSGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVVPSKSP*
Ga0137404_100129555	3300012929	Vadose Zone Soil	MGDNNGGGSSAAVVAIFVIFVIVVAAALFFFGGQFFGGGGSGTKKVDVNVHAPAVPSKSP
Ga0137404_100436992	3300012929	Vadose Zone Soil	MADNNGAGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAGGTKKVDVNVKAPAEPGKVVPGKSP*
Ga0157307_11401171	3300013096	Soil	YQRIKEDRFMADNNGGGSNAAVVAIFVIFVIIVIAALFMFGGQFFGGSGGTKKVDVNIKAPAEPGKVVPSKSP*
Ga0157307_11698272	3300013096	Soil	MADNNGGGNNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKVVPSKSP
Ga0157374_101611961	3300013296	Miscanthus Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKSRA*
Ga0163162_103992742	3300013306	Switchgrass Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKVVPSKSP*
Ga0157375_105484411	3300013308	Miscanthus Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVIAAVFMFGGQFFGGSGGTKKVDVNIKAPAEPGKVVPSKSP*
Ga0134072_101139792	3300015357	Grasslands Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNV
Ga0132258_109349732	3300015371	Arabidopsis Rhizosphere	MILMADENGGSGGPAVVAIVVIFVIVAAVLLFMFGGQFFGGGSSTKKVDVNIKAPVPTSSP*
Ga0132256_1035682511	3300015372	Arabidopsis Rhizosphere	WRIELMADNNGGGSNAAVVAIFVIFIVIVAVAVFFFGGQFFGGSHETKKVDVNIKAPAVPGKSP*
Ga0134074_12827861	3300017657	Grasslands Soil	MADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP
Ga0184604_100016633	3300018000	Groundwater Sediment	MADNNGGGGGSNAAVVAIFVIFVIIVAAVLFMFGGQFFGGSAGGTKKVDVNVKAPAEPGKVVPSKSP
Ga0184608_101607311	3300018028	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFVGHGGETKKVDVNVKAPAVPGKSP
Ga0184621_100252125	3300018054	Groundwater Sediment	DNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFVGHGGETKKVDVNVKAPAVPGKSP
Ga0184619_102348232	3300018061	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0184635_103301222	3300018072	Groundwater Sediment	MADNNGGGSSAAVVAIFVIFVIVAAAAAFFFFGGHFGGGGGETKKVDVNIKAPAVPSKSP
Ga0184625_105000421	3300018081	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAGGTKKVDVNVKAP
Ga0184625_105701451	3300018081	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFVIVVAAVLFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0066655_101265402	3300018431	Grasslands Soil	MAEHNSRSNVAVVAILGIFVIIVAAALFIFSGKFFGGGGDSKKADVNVQAPALPGKAAPGKSP
Ga0066655_104165492	3300018431	Grasslands Soil	MADSNSGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASE
Ga0066655_107927511	3300018431	Grasslands Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP
Ga0066667_114060961	3300018433	Grasslands Soil	MADSNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSRGETKKVDVNVKAPASEPGKVVPSKSP
Ga0066662_102775251	3300018468	Grasslands Soil	MADDKRGGGGPAIVAIVVIFIIVVAVALFMFGGQFFGGGQSKKVDVNIKAPVPTKSP
Ga0066669_101852211	3300018482	Grasslands Soil	MGDNNGGGSSAAVVAIFVIFVIVVAAALFFFGGQFFGGSGGGTKKVDVNVHAPAVPSKSP
Ga0193756_10244652	3300019866	Soil	MADNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGGGASGSKKVDVNIKAPAVPSKSP
Ga0193723_10412903	3300019879	Soil	MADNNGGGSSAAVVAIFVIFVIIVAAALFFFSGQFSGGGSQTKKVDVNIKAPAVPSKSP
Ga0193747_10216021	3300019885	Soil	FMADNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGGGASGSKKVDVNIKAPAVPSKS
Ga0193735_10904463	3300020006	Soil	NGGGSNAAVVAIFVIFIIIVAAALFFFGGQFVGRGAETKKVDVNIKAPAVPSKSP
Ga0193732_10429691	3300020012	Soil	MADNGGGSNAAVVAIFVIFIIIVAAVLFFFGGQFFGGGHGGETKKVDVNIKAPAVPSKSP
Ga0193732_10462682	3300020012	Soil	FMADNNSGGSGGPAVVAIVVIFVIVAAIALFMFGGQFFGGGGQTKKVDVNVKAPVSTKP
Ga0210382_102144462	3300021080	Groundwater Sediment	MADNNGGGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAGGTKKVDVNVKAPAEPGKVVPSKSP
Ga0213882_102913661	3300021362	Exposed Rock	MQPVMADINGGSGGPAVVAIVVIFIIAIAVVLFLFGGQFFGGGGSKKVDVNVKAPVPTKS
Ga0193750_10221343	3300021413	Soil	MADSNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGHGGETKKVDVDIKAPAVPSKSP
Ga0222623_100755654	3300022694	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFIIIVAAVLFFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0222622_100442852	3300022756	Groundwater Sediment	MADNNGGGSNAAVVAIFVIFLIIVAAALFFFGGQFFGGGGGETKKVDVNIKAPAVPSKSP
Ga0222622_103194491	3300022756	Groundwater Sediment	MADGNGGGSNAAVVAIVVIFVIIVAAALFMFGGQFFGGGGGTKKVDVNVTAPAAPGKAVPGKSP
Ga0207697_100346482	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKVVPSKSP
Ga0207681_109357891	3300025923	Switchgrass Rhizosphere	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGSSAGGTKKVDVNIKAPAEPGKSR
Ga0209265_11175942	3300026308	Soil	MADNNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFAGSGGETKKVDVNVKAPASEPGKVVPSKSP
Ga0209265_11557061	3300026308	Soil	MADDNGGGSNAAVVAIFVIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVASKSP
Ga0209155_10819022	3300026316	Soil	MADNNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGGETKKVDVNVKAPASEPGKVVPSKSP
Ga0209154_13021301	3300026317	Soil	MADDNGGGSNAAVVAIFIIFLIIVAAAIFFFGGQFVGGGSQTKKVDVNVKAPAVPSKSP
Ga0209152_101100632	3300026325	Soil	MADNNSGGGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGETKKVDVNVKAPASEPGKVVPSKSP
Ga0209378_12194802	3300026528	Soil	AYNNSGNGSSAAVVAILVIFLIIIAAVVFFFGGQFVGGGGQTKKVDVNVKAPAVPGKSP
Ga0209805_10718311	3300026542	Soil	MADSNSGAGSNAAVVAIFVIFIIIVAAALFFFGGQFFGGSGETKKVDVNVKA
Ga0209161_101718883	3300026548	Soil	DFMAYNNSGNGSSAAVVAILVIFLIIIAAVVFFFGGQFVGGGGQTKKVDVNVKAPAVPGKSP
Ga0209474_106573181	3300026550	Soil	MDFMADNNSGGGSSAAVVAIFVIFVIIVAAALFFFGGQFFGGSGETKKVDVNVKAPAEPGKVVPSKSP
Ga0307313_101216912	3300028715	Soil	MADNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFVGHGGETKKVDVNVKAPAVPGKSP
Ga0307278_105070162	3300028878	Soil	MADNNGGGSNAAVVAIFVIFVIIVAAALFMFGGQFFGGSAGGTKKVDVNVKAPAEPGKVVPGKSP
Ga0310813_119248122	3300031716	Soil	MADNNGGSSSAAVVAIFVIFLIVVAAAAFFFFGGQFSGGGGDTKKVDVNIKAPAVPSKSP
Ga0307471_1014501472	3300032180	Hardwood Forest Soil	MADNGGGSNAAVVAIFVIFIIIVAAALFFFGGQFIGHGGETKKVDVNIKAPAVSSKSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F045911

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences