Metagenome / Metatranscriptome Family F045910

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045910
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	67 residues
Representative Sequence	MLGQDAGRKAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVHMVEKVGSAAPADC
Number of Associated Samples	89
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.63 %
% of genes near scaffold ends (potentially truncated)	28.95 %
% of genes from short scaffolds (< 2000 bps)	85.53 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.947 % of family members)
Environment Ontology (ENVO)	Unclassified (45.395 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.342 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.89% β-sheet: 0.00% Coil/Unstructured: 62.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF00550	PP-binding	6.58
PF02113	Peptidase_S13	2.63
PF08042	PqqA	2.63
PF02357	NusG	2.63
PF09084	NMT1	1.97
PF02082	Rrf2	1.97
PF00723	Glyco_hydro_15	1.97
PF00440	TetR_N	1.32
PF07589	PEP-CTERM	1.32
PF03466	LysR_substrate	0.66
PF13442	Cytochrome_CBB3	0.66
PF01070	FMN_dh	0.66
PF07886	BA14K	0.66
PF12850	Metallophos_2	0.66
PF04679	DNA_ligase_A_C	0.66
PF03288	Pox_D5	0.66
PF00004	AAA	0.66
PF00239	Resolvase	0.66
PF05401	NodS	0.66
PF13302	Acetyltransf_3	0.66
PF13610	DDE_Tnp_IS240	0.66
PF04851	ResIII	0.66
PF13847	Methyltransf_31	0.66
PF05532	CsbD	0.66
PF00294	PfkB	0.66
PF00072	Response_reg	0.66
PF01925	TauE	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	2.63
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.63
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.97
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	1.97
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.97
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.97
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.97
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.97
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.97
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.97
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.97
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.97
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.97
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.66
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.66
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.66
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.66
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.66
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	0.66
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.66 %
Unclassified	root	N/A	49.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.66 %
Unclassified	root	N/A	49.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.66 %
Unclassified	root	N/A	49.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.29 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.97 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.32 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.32 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.32 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.66 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.29 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.97 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.32 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.32 %
Aliihoeflea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aliihoeflea	0.66 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.66 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.66 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.29 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.97 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.32 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.32 %
unclassified Aliihoeflea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aliihoeflea → unclassified Aliihoeflea	0.66 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.66 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.66 %
Bradyrhizobiaceae bacterium SG-6C	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium SG-6C	0.66 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.34 %
Amycolatopsis pithecellobii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	3.29 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.97 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.32 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.32 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.66 %
Ensifer aridi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	0.66 %
Aliihoeflea sp. 2WW	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aliihoeflea → unclassified Aliihoeflea → Aliihoeflea sp. 2WW	0.66 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.66 %
Bradyrhizobiaceae bacterium SG-6C	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium SG-6C	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10078512	Not Available	1576	Open in IMG/M
3300001356\|JGI12269J14319_10172726	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300001546\|JGI12659J15293_10003999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4413	Open in IMG/M
3300001593\|JGI12635J15846_10133490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1731	Open in IMG/M
3300002245\|JGIcombinedJ26739_100003379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	11605	Open in IMG/M
3300002245\|JGIcombinedJ26739_100208107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1848	Open in IMG/M
3300002245\|JGIcombinedJ26739_100856437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300002245\|JGIcombinedJ26739_101063777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium SG-6C	695	Open in IMG/M
3300002245\|JGIcombinedJ26739_101187852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	652	Open in IMG/M
3300003505\|JGIcombinedJ51221_10131069	Not Available	1008	Open in IMG/M
3300003505\|JGIcombinedJ51221_10204170	Not Available	802	Open in IMG/M
3300004080\|Ga0062385_10299493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	921	Open in IMG/M
3300004080\|Ga0062385_10738884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300004082\|Ga0062384_100188017	Not Available	1207	Open in IMG/M
3300004082\|Ga0062384_100466965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	829	Open in IMG/M
3300004092\|Ga0062389_101009067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1017	Open in IMG/M
3300004092\|Ga0062389_101636411	Not Available	826	Open in IMG/M
3300004092\|Ga0062389_103590162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	582	Open in IMG/M
3300005434\|Ga0070709_11627826	Not Available	526	Open in IMG/M
3300005534\|Ga0070735_10061785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2440	Open in IMG/M
3300005534\|Ga0070735_10067603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2312	Open in IMG/M
3300005542\|Ga0070732_10117135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1575	Open in IMG/M
3300005602\|Ga0070762_10093040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1732	Open in IMG/M
3300005602\|Ga0070762_10560434	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005602\|Ga0070762_10581227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aliihoeflea → unclassified Aliihoeflea → Aliihoeflea sp. 2WW	742	Open in IMG/M
3300005602\|Ga0070762_10631222	Not Available	714	Open in IMG/M
3300005610\|Ga0070763_10001932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7205	Open in IMG/M
3300005610\|Ga0070763_10283922	Not Available	906	Open in IMG/M
3300005712\|Ga0070764_10660065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300005921\|Ga0070766_10219977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300005921\|Ga0070766_10294553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	1040	Open in IMG/M
3300005921\|Ga0070766_10320551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300005921\|Ga0070766_10693521	Not Available	689	Open in IMG/M
3300006028\|Ga0070717_11619182	Not Available	587	Open in IMG/M
3300006175\|Ga0070712_100520464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	999	Open in IMG/M
3300006175\|Ga0070712_101674903	Not Available	557	Open in IMG/M
3300006176\|Ga0070765_100374845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1325	Open in IMG/M
3300009522\|Ga0116218_1483099	Not Available	552	Open in IMG/M
3300009698\|Ga0116216_10234601	Not Available	1122	Open in IMG/M
3300009700\|Ga0116217_10281067	Not Available	1074	Open in IMG/M
3300010371\|Ga0134125_12726063	Not Available	537	Open in IMG/M
3300010379\|Ga0136449_100002801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52362	Open in IMG/M
3300010864\|Ga0126357_1066607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300010864\|Ga0126357_1241969	Not Available	1393	Open in IMG/M
3300010869\|Ga0126359_1283897	Not Available	626	Open in IMG/M
3300010877\|Ga0126356_10498290	Not Available	803	Open in IMG/M
3300010880\|Ga0126350_11886458	Not Available	625	Open in IMG/M
3300011120\|Ga0150983_16474126	Not Available	701	Open in IMG/M
3300012154\|Ga0153953_1015683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1768	Open in IMG/M
3300012176\|Ga0153952_1135200	Not Available	543	Open in IMG/M
3300012677\|Ga0153928_1072157	Not Available	662	Open in IMG/M
3300012924\|Ga0137413_10675552	Not Available	781	Open in IMG/M
3300012986\|Ga0164304_11051450	Not Available	648	Open in IMG/M
3300017937\|Ga0187809_10237452	Not Available	656	Open in IMG/M
3300017994\|Ga0187822_10041666	Not Available	1263	Open in IMG/M
3300020579\|Ga0210407_10997993	Not Available	638	Open in IMG/M
3300020581\|Ga0210399_10273856	Not Available	1409	Open in IMG/M
3300020581\|Ga0210399_10391177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300020581\|Ga0210399_10853182	Not Available	741	Open in IMG/M
3300020582\|Ga0210395_10023027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4579	Open in IMG/M
3300020582\|Ga0210395_10113236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2011	Open in IMG/M
3300020582\|Ga0210395_10114613	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300020582\|Ga0210395_10306142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	1195	Open in IMG/M
3300020582\|Ga0210395_10378624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300020582\|Ga0210395_10461050	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300020583\|Ga0210401_10638240	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300020583\|Ga0210401_11375069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	564	Open in IMG/M
3300021168\|Ga0210406_10267107	All Organisms → cellular organisms → Bacteria → Proteobacteria	1400	Open in IMG/M
3300021168\|Ga0210406_10588461	Not Available	870	Open in IMG/M
3300021170\|Ga0210400_10771496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300021171\|Ga0210405_10168649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1734	Open in IMG/M
3300021181\|Ga0210388_10854902	Not Available	786	Open in IMG/M
3300021181\|Ga0210388_11081172	Not Available	685	Open in IMG/M
3300021384\|Ga0213876_10073187	Not Available	1809	Open in IMG/M
3300021401\|Ga0210393_10383929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1145	Open in IMG/M
3300021401\|Ga0210393_11148283	Not Available	626	Open in IMG/M
3300021401\|Ga0210393_11539630	Not Available	528	Open in IMG/M
3300021401\|Ga0210393_11636622	Not Available	510	Open in IMG/M
3300021402\|Ga0210385_10316900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300021403\|Ga0210397_10336561	Not Available	1116	Open in IMG/M
3300021403\|Ga0210397_10536177	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300021403\|Ga0210397_10977534	Not Available	656	Open in IMG/M
3300021404\|Ga0210389_11521181	Not Available	508	Open in IMG/M
3300021405\|Ga0210387_10623442	Not Available	958	Open in IMG/M
3300021405\|Ga0210387_10762816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300021405\|Ga0210387_11899234	Not Available	500	Open in IMG/M
3300021406\|Ga0210386_10230455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1576	Open in IMG/M
3300021407\|Ga0210383_10486308	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300021420\|Ga0210394_10421579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1175	Open in IMG/M
3300021420\|Ga0210394_10515267	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300021433\|Ga0210391_10876610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	701	Open in IMG/M
3300021475\|Ga0210392_10959534	Not Available	640	Open in IMG/M
3300021475\|Ga0210392_11005928	Not Available	624	Open in IMG/M
3300021477\|Ga0210398_10045147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	3637	Open in IMG/M
3300021477\|Ga0210398_10760886	Not Available	782	Open in IMG/M
3300021478\|Ga0210402_10151114	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300021478\|Ga0210402_10557988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1063	Open in IMG/M
3300021479\|Ga0210410_10739794	Not Available	866	Open in IMG/M
3300025913\|Ga0207695_10048370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4491	Open in IMG/M
3300027559\|Ga0209222_1072662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	662	Open in IMG/M
3300027568\|Ga0208042_1060786	Not Available	962	Open in IMG/M
3300027568\|Ga0208042_1164210	Not Available	554	Open in IMG/M
3300027575\|Ga0209525_1094219	Not Available	710	Open in IMG/M
3300027609\|Ga0209221_1096164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	764	Open in IMG/M
3300027619\|Ga0209330_1005894	All Organisms → cellular organisms → Bacteria → Proteobacteria	2772	Open in IMG/M
3300027692\|Ga0209530_1049375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300027767\|Ga0209655_10109824	Not Available	917	Open in IMG/M
3300027855\|Ga0209693_10106445	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300027855\|Ga0209693_10112410	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300027867\|Ga0209167_10213578	Not Available	1030	Open in IMG/M
3300027884\|Ga0209275_10499026	Not Available	693	Open in IMG/M
3300027889\|Ga0209380_10308867	Not Available	929	Open in IMG/M
3300027895\|Ga0209624_10053119	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300027905\|Ga0209415_10673811	Not Available	747	Open in IMG/M
3300027908\|Ga0209006_10256631	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300027908\|Ga0209006_10502679	Not Available	1011	Open in IMG/M
3300027908\|Ga0209006_10716579	Not Available	818	Open in IMG/M
3300027908\|Ga0209006_10949630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300027908\|Ga0209006_11066577	Not Available	639	Open in IMG/M
3300027908\|Ga0209006_11146494	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300027908\|Ga0209006_11547470	Not Available	500	Open in IMG/M
3300028906\|Ga0308309_10384796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300030659\|Ga0316363_10264733	Not Available	696	Open in IMG/M
3300030707\|Ga0310038_10175307	Not Available	1043	Open in IMG/M
3300030730\|Ga0307482_1128293	Not Available	721	Open in IMG/M
3300031715\|Ga0307476_10155170	Not Available	1647	Open in IMG/M
3300031715\|Ga0307476_11160837	Not Available	566	Open in IMG/M
3300031718\|Ga0307474_10815992	Not Available	738	Open in IMG/M
3300031718\|Ga0307474_10965453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300031754\|Ga0307475_11587202	Not Available	500	Open in IMG/M
3300031823\|Ga0307478_11016215	Not Available	693	Open in IMG/M
3300031823\|Ga0307478_11825048	Not Available	500	Open in IMG/M
3300031962\|Ga0307479_11883914	Not Available	549	Open in IMG/M
3300032008\|Ga0318562_10547122	Not Available	670	Open in IMG/M
3300032009\|Ga0318563_10528855	Not Available	637	Open in IMG/M
3300032160\|Ga0311301_10086103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6360	Open in IMG/M
3300032895\|Ga0335074_10058651	All Organisms → cellular organisms → Bacteria	5261	Open in IMG/M
3300032895\|Ga0335074_10135717	All Organisms → cellular organisms → Bacteria → Proteobacteria	3151	Open in IMG/M
3300032895\|Ga0335074_10185717	Not Available	2563	Open in IMG/M
3300032895\|Ga0335074_10192457	Not Available	2502	Open in IMG/M
3300032895\|Ga0335074_10211222	Not Available	2347	Open in IMG/M
3300032895\|Ga0335074_10435022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1400	Open in IMG/M
3300032895\|Ga0335074_10941026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	774	Open in IMG/M
3300032896\|Ga0335075_10106810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3642	Open in IMG/M
3300032896\|Ga0335075_10143900	All Organisms → cellular organisms → Bacteria	2993	Open in IMG/M
3300032896\|Ga0335075_10158397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2805	Open in IMG/M
3300032896\|Ga0335075_11079005	Not Available	711	Open in IMG/M
3300032898\|Ga0335072_10503556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1254	Open in IMG/M
3300032898\|Ga0335072_10817064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	888	Open in IMG/M
3300032898\|Ga0335072_11397350	Not Available	605	Open in IMG/M
3300033134\|Ga0335073_10637504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300033134\|Ga0335073_10817368	Not Available	997	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.71%
Host-Associated	Host-Associated	3.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.13%
Aquatic	Environmental → Aquatic	6.58%
Fungi	Host-Associated → Fungi	1.97%
Plants	Host-Associated → Plants	1.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.13%
Freshwater	Environmental → Aquatic → Freshwater	6.58%
Mycelium	Host-Associated → Fungi → Mycelium	1.97%
Roots	Host-Associated → Plants → Roots	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.66%
Loam	Environmental → Terrestrial → Soil → Loam	28.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.32%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.26%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012154	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaG	Host-Associated	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100785123	3300000567	Peatlands Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS*
JGI12269J14319_101727262	3300001356	Peatlands Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPTLRLAIVQMVENV
JGI12659J15293_100039995	3300001546	Forest Soil	MLEQEAGRKAHRTFAASSEIDTGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKVGSAPADC*
JGI12635J15846_101334904	3300001593	Forest Soil	MLEQDAGRKASRKVAASSALEMSRSQTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKVGSATADC*
JGIcombinedJ26739_1000033799	3300002245	Forest Soil	MLEQDAGRKASRKFAGSSAIETGLSQINDPKEGARLIQAFLRITDPAIRLAMIHMVEKVGSAAAADC*
JGIcombinedJ26739_1002081074	3300002245	Forest Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVRAFLQITDPTLRLAIVQMVENVGSAPVDRVEISRS*
JGIcombinedJ26739_1008564372	3300002245	Forest Soil	MLEHDAGRKARHTFGASSEIETGLSQIDDPQQGARLVRAFLRITDPRIRLAIVQMVERFGSAAAPDC*
JGIcombinedJ26739_1010637771	3300002245	Forest Soil	MLEQDGGPKASRKFAVSSEIETGLSQTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKMGYAPADC*
JGIcombinedJ26739_1011878521	3300002245	Forest Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVQMVEKVVSAPADR
JGIcombinedJ51221_101310691	3300003505	Forest Soil	MVEQDAGRKAHRKFAASSAIETSLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC*
JGIcombinedJ51221_102041702	3300003505	Forest Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS*
Ga0062385_102994932	3300004080	Bog Forest Soil	MLEKDAGQTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES*
Ga0062385_107388841	3300004080	Bog Forest Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVHMVETMGSASSES*
Ga0062384_1001880171	3300004082	Bog Forest Soil	MLEQEAGQKAHRTFAASSEIETGLSRINDPKEGARLIRAFLRIADPAIRLAIIHMVEKVGSAASADC*
Ga0062384_1004669652	3300004082	Bog Forest Soil	MLEKDAGQTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSARAES*
Ga0062389_1010090673	3300004092	Bog Forest Soil	MLEQDAGRKASRKFAASSAIETGLLQINDPKEGARLIQAFLRITDPAIRLAMIHMVEKVGSAAAADC*
Ga0062389_1016364112	3300004092	Bog Forest Soil	MLEQDAGRKARRTFAASSEIETGLSQTNDPQLGARLVRAFLRITDPTVRLAIIQMIEKMGYAPADC*
Ga0062389_1035901622	3300004092	Bog Forest Soil	TAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES*
Ga0070709_116278262	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLTRAAGRNAQRKFGPSSAIETDLPQINDPKQGARLIRAFLRVTDPRVRLAIVQMVEKA
Ga0070735_100617851	3300005534	Surface Soil	MLEQDAGRKADREFAAPSALETGLSQTNDPQLGARLVRAFLRIADPRVRLAIVHMVEKMESAPADC*
Ga0070735_100676032	3300005534	Surface Soil	MLAEDAGRKDHRKFDASSAIETGLSQINDPKQGARLVRAFLRIADPRLRLAIVQMVEKAGSAAAADC*
Ga0070732_101171351	3300005542	Surface Soil	MLEQDAGRKADREFAAPSALETGLSQMNDPQLGARLVRAFLRIADPRVRLAIVHMVEKMESAPADC*
Ga0070762_100930403	3300005602	Soil	MLEKDAGRTAHRKFAASSAIETGLSQTNDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES*
Ga0070762_105604342	3300005602	Soil	MSEQDAGRTAHRKFAVSSAIETGLSQISDPKQGAQLVRAFLRITDPTLRLKIVQMVEKVGSAPAES*
Ga0070762_105812271	3300005602	Soil	MLEQDAGREAHRTFAVDTGISEIDDPKQGARLVRAFLRISDPTVRLEIVEMIENVGSALADYDHPCCKS*
Ga0070762_106312221	3300005602	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVQMVETMGSASSES*
Ga0070763_100019326	3300005610	Soil	MVEQDAGRKADHKFAASSAIETGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC*
Ga0070763_102839221	3300005610	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPALRLAIVQMVENVGSAPADRVEISRS*
Ga0070764_106600652	3300005712	Soil	MSEKDAGRTAHRKFAASSAIETSLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC*
Ga0070766_102199773	3300005921	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVRMVETMGSASSES*
Ga0070766_102945534	3300005921	Soil	RTAHRKFAASSAIETGLSQTNDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES*
Ga0070766_103205512	3300005921	Soil	MSEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRIANPAVRLAIVQMVEKVGSAPAES*
Ga0070766_106935212	3300005921	Soil	MSEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS*
Ga0070717_116191823	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLTRAAGRNAQRKFGPSSAIETDLPQINDPKQGAPLIRAFLRVTDPRVRLAIVQMVEKAGSASAAD
Ga0070712_1005204643	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AHRKFAASSAIEAGLSQINDPKQRARLIRAFLRITDPRVRPAIVQMVEKVGSASADC*
Ga0070712_1016749032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGYTMLARAAGRNAQRKFGPFSAIETDLPQINDPKQGARLIRAFLRVTDPRVRLAIVQMVEKAGSASAADC*
Ga0070765_1003748451	3300006176	Soil	AMLEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES*
Ga0116218_14830992	3300009522	Peatlands Soil	MLGQDAGRKAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVHMVEKVGSAAPADC*
Ga0116216_102346011	3300009698	Peatlands Soil	MLEQGTGRIAHRTFAASSEIETGLSQVNDPKQGARLVRAFLRITDPRVRLAIVQMVENVGSAPADR
Ga0116217_102810672	3300009700	Peatlands Soil	MLEQGTGRIAHRTFAASSEIETGLSQVNDPKQGARLVRAFLRITDPRVRLAIVQMVENVGSAPADRDRPRYEG*
Ga0134125_127260631	3300010371	Terrestrial Soil	MLEQDAGRKADREFAAPSALETGLSQMNDPQLGARLVRAFLRIADPRVRLAIVDMVEKMESAPADC*
Ga0136449_10000280151	3300010379	Peatlands Soil	MLEQDAGPKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPMVRLEIVHMVEKVGTALADRVEISRS*
Ga0126357_10666072	3300010864	Boreal Forest Soil	MSEQDGGPKASRKFAAYSALEMSRSQTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKMGYAPADC*
Ga0126357_12419693	3300010864	Boreal Forest Soil	MLEQDAGRKASRKFAASSEIETGLSQINDPKEGARLIGAFLRITDPAIRRAIIHMIEKVGSAAPADC*
Ga0126359_12838972	3300010869	Boreal Forest Soil	MLEQDRGRKASRKFAASSALEMSLSQTNDPQQGARLVRAFLRIADPRVRLAIVQMVEKMGYAPADC*
Ga0126356_104982901	3300010877	Boreal Forest Soil	MLEQDAGRKASRKFAASSEIETGLSQINDPKEGARLIGAFLRITDPAIRRAIIHMVEKVGSAAPADC*
Ga0126350_118864581	3300010880	Boreal Forest Soil	MLEQVSGRKAQREFAAPPALDMNLSPSHDPQEGARLVRAFLRITDPGIRLAIVHMVEKMGRAPARSPDASRRSA
Ga0150983_164741261	3300011120	Forest Soil	MLEQDAGRKAHRKFAGSSAIETGLSQINDPKQGARLVRAFLRITDPTLRVAIVQVVEKVGSAPADEGGAPFRGR*
Ga0153953_10156832	3300012154	Attine Ant Fungus Gardens	MLEEDSERQAHRKFPVSSALEMSLSQTHDPQEGARLVRAFLRIADPGVRSAIVQMVEKMGSAAADC*
Ga0153952_11352001	3300012176	Attine Ant Fungus Gardens	LARDVSGKAHRKFAASSAIEAGLSQINDPKQGARLIRAFLRITDPRVRLAIVQMVEKVGSASADC*
Ga0153928_10721571	3300012677	Attine Ant Fungus Gardens	DSEPKAHRKFAASSALEMSLSQTHDPQEGARLVRAFLRITDPGIRSAIVQMVERLGSAPADC*
Ga0137413_106755521	3300012924	Vadose Zone Soil	MLARAAGRNAQRKFGPSSAIETDLPQINDPKQGARLIRAFLRVTDPRVRLAIVHMVEKAGSASAADC*
Ga0164304_110514502	3300012986	Soil	MSELDSVRKVKFAAPFAFEMSISPTNDPQEGARLVRAFLRITDPQVRSAIVHMVETMGSEPAEF*
Ga0187809_102374522	3300017937	Freshwater Sediment	FFDDPLEAPAMLEQDAGRKADREFAAPSALETGLSQMNDPQLGARLVRAFLRIADPRVRLAIVDMVEKMESAPADC
Ga0187822_100416662	3300017994	Freshwater Sediment	MLEQDAGRKADREFAAPSALETGLSQMNDPQLGARLVRAFLRIADPRVRLAIVDMVEKMESAPADC
Ga0210407_109979932	3300020579	Soil	MLERDGGRKASRKFAASSALEMSLSQTNDPQQGARLVWAFLRIADPRVRLAIVQMIEKMGYAPADC
Ga0210399_102738562	3300020581	Soil	MLEKDAGRTAHRKFAASSAIETGLSQTNDPKQGARLVWAFLRITNPAVRLAIVQMVEKVGSAPAES
Ga0210399_103911771	3300020581	Soil	GRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVQMVETMGFASSES
Ga0210399_108531822	3300020581	Soil	LERDGGRKASRKFAASSALEMSLSQTNDPQQGARLVWAFLRIADPRVRLAIVQMIEKMGYAPADC
Ga0210395_100230273	3300020582	Soil	MVEQDAGRKAHRKFAASSAIETSLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC
Ga0210395_101132362	3300020582	Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVQMVEKVVSAAPADC
Ga0210395_101146134	3300020582	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0210395_103061421	3300020582	Soil	MSEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRIANPAVRLAIVQMVEKVGSAPAES
Ga0210395_103786243	3300020582	Soil	LEQDAGRKPNREFAASSALEMRRSQTNDPQQGARLVRAFLQITDPRVRLAIVQMVEKVGSAAAVDC
Ga0210395_104610501	3300020582	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGALLVRAFLRITDPGVRSAIVHMVETMDSASSES
Ga0210401_106382401	3300020583	Soil	AMLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPALRLAIVQMVENVGSAPADRVEISRS
Ga0210401_113750691	3300020583	Soil	KFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVQMVETMGFASSES
Ga0210406_102671071	3300021168	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVHMVETM
Ga0210406_105884612	3300021168	Soil	MLEKDAGRTAHRKFAASSAIETGLSQINVPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES
Ga0210400_107714961	3300021170	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEIS
Ga0210405_101686493	3300021171	Soil	MLEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES
Ga0210388_108549022	3300021181	Soil	MVEQDAGRKAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC
Ga0210388_110811722	3300021181	Soil	MLEQDAGRKPNREFAASSALEMRRSQTNDPQQGARLVRAFLQITDPRVRLAIVQMVEKVGSAAAVDC
Ga0213876_100731872	3300021384	Plant Roots	MLEQNAERKTDRNFAPPPALEMGLSQTYDPQEGARLIRAFLRIADPGVRSVIVHMVERMASPKDC
Ga0210393_103839292	3300021401	Soil	MLEQEAGRKAHRTFAASSEIDTGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKVGSAPADC
Ga0210393_111482831	3300021401	Soil	MWEQDAGRKASRKFATSSALEITRSHTDDPQQGARLVRAFLRITDPRVRLAIVQMVEKVGFAAAADC
Ga0210393_115396301	3300021401	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITGPGVRSAIVQMVETMGSASSES
Ga0210393_116366221	3300021401	Soil	STLTILVVPRRVCAMWEQDAGRKASRKFATSSALEMSRSHTNDPQQGARLVRAFLLITDPRVRLAIVQMVEKVGFAAAADC
Ga0210385_103169002	3300021402	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVRAFLRITDPTLRLAIVQMIENVGSAPADRVKISRS
Ga0210397_103365613	3300021403	Soil	QDGGPKAGRKFAASSALEMRLPQTNDPQQGARLVRAFLRIADPRVRLAIVQMVERMGYAPADC
Ga0210397_105361772	3300021403	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVQADPGVRSAIVRMVETMGSAS
Ga0210397_109775341	3300021403	Soil	GDDGRKAHRKFAASSAIETSLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKIGSAAPADC
Ga0210389_115211811	3300021404	Soil	MLEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRIANPAVRLAIVQMIEKVGSAPAAS
Ga0210387_106234422	3300021405	Soil	MLEQEAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKVGSAPADC
Ga0210387_107628161	3300021405	Soil	MADALVSIAWGVCAMSEQDAGRKAHRKFAVSSAIERGISQINDPKQGARLVRAFLRIANPAVRLAIVQMVEKVGSAPAES
Ga0210387_118992342	3300021405	Soil	MWEQDAGGKASRKFTTSSALEMGRLRTDDPQQGARLVRAFLRITDSRVRLAIIQMVEKVGSAAAADC
Ga0210386_102304552	3300021406	Soil	MSEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES
Ga0210383_104863083	3300021407	Soil	SAMLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITGPGVRSAIVQMVETMGSASSES
Ga0210394_104215793	3300021420	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVRMVETMGSASSES
Ga0210394_105152671	3300021420	Soil	AQCLEQDAGRKAHRIFAASSEIATGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0210391_108766101	3300021433	Soil	GRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITGPGVRSAIVQMVETMGSASSES
Ga0210392_109595341	3300021475	Soil	MLEQESGRKDHHKFAVSSPFEMNLSQTNDPQEGALLVRAFLRITDPGVRSAIVHMVETMDSASSES
Ga0210392_110059282	3300021475	Soil	MWEQDAGRKASRKFATSSALEITRSHTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKVGFAAAADC
Ga0210398_100451473	3300021477	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVRAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0210398_107608862	3300021477	Soil	GGVCAMSEKDAGRTAHRKFAASSAIETGLSQINDPKQGARLVRAFLRIANPAVRLAIVQMVEKVGSAPAES
Ga0210402_101511143	3300021478	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVHMVETMDSASSES
Ga0210402_105579882	3300021478	Soil	AHRTFAASSEIEMGLSQINDPKQGARLIRAFLRITDPTLRLAIVQMIENVGPAPADRVEISRS
Ga0210410_107397941	3300021479	Soil	LEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0207695_100483703	3300025913	Corn Rhizosphere	MLEQDAGRKAHRKFAAPSALGMGSQTHDPQLGARLVRAFLRIADPRVRLAIVDMVEKMEAAPADC
Ga0209222_10726622	3300027559	Forest Soil	MLEQDAGRKASRKVAASSALEMSRSQTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKVGSATADC
Ga0208042_10607863	3300027568	Peatlands Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0208042_11642101	3300027568	Peatlands Soil	MLEQDAGPKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPMVRLEIVHMVEKVGTALADRVEISRS
Ga0209525_10942191	3300027575	Forest Soil	MLEQDAGRKASRKFAGSSAIETGLSQINDPKEGARLIQAFLRITDPAIRLAMIHMVEKVGSAAAADC
Ga0209221_10961641	3300027609	Forest Soil	KASRKVAASSALEMSRSQTNDPQQGARLVRAFLRITDPRVRLAIVQMVEKVGSATADC
Ga0209330_10058942	3300027619	Forest Soil	MLEQDAGRKPSREFAASSALEMRRSQTNDPQQGARLVRAFLQITDPRVRLAIVQMVEKVGSAAAVDC
Ga0209530_10493751	3300027692	Forest Soil	MLEQDAGRKAHCKINASSAIETGLSQINDPKQGARLIRAFLRITDPRVRLAIVQMVEKAGSASADC
Ga0209655_101098241	3300027767	Bog Forest Soil	MLEQEAGQKAHRTFAASSEIETGLSRINDPKEGARLIRAFLRIADPAIRLAIIHMVEKVGSAASADC
Ga0209693_101064452	3300027855	Soil	MLEQDAGRKAHRIFAASSEIETGLSQINDPKQGARLVPAFLRITDPALRLAIVQMVENVGSAPADRVEISRS
Ga0209693_101124102	3300027855	Soil	LEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVQMVETMGSASSES
Ga0209167_102135782	3300027867	Surface Soil	MLEQDAGRKADREFAAPSALETGLSQTNDPQLGARLVRAFLRIADPRVRLAIVHMVEKMESAPADC
Ga0209275_104990261	3300027884	Soil	MLEQDAGREAHRTFAVDTGISEIDDPKQGARLVRAFLRISDPTVRLEIVEMIENVGSALADYDH
Ga0209380_103088671	3300027889	Soil	MLERDAGRKAHRTFAASSEIETGLSQINDPKQGARLVPAFLRITDPTLRLAIVQMVENVGSAPADRVEISRS
Ga0209624_100531193	3300027895	Forest Soil	MLEQVSRRKAQREFAAPPALDMNLSPSHDPQEGARLVRAFLRITDPGIRLAIVHMVEKMGRAPARSPDARRRSA
Ga0209415_106738111	3300027905	Peatlands Soil	MLGQDAGRKAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVHMVEKVGSAAP
Ga0209006_102566314	3300027908	Forest Soil	MWEQDAGRKASRKFAASSALEITRSHTDDPQQGARLVRAFLRIADPRVRLAIVQMVEKVGFAAAADC
Ga0209006_105026792	3300027908	Forest Soil	MWEQDAGRKASRKFATSSALEMSRSHTNDPQQGARLVRAFLLITDPRVRLAIVQMVEKVGFAAAADC
Ga0209006_107165791	3300027908	Forest Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGALLVRAFLRITDPGVRSAIVHMVETKGSASSES
Ga0209006_109496301	3300027908	Forest Soil	EAGRKAHRTFAASSEIETGLSQINDPKQGARLVRAFLRITDPMVRLAIVHMVEKVGSAPADC
Ga0209006_110665771	3300027908	Forest Soil	MLEQDGGPKASRKFAVSSEIETGLSQTNDPQQGARLVRAFLRITDPRVRLAIVQMV
Ga0209006_111464941	3300027908	Forest Soil	MLDQDGGRKAGRKFAASSALEMSHSQTNDPQQGARLVRAFLRITDPRVRLAIVQMV
Ga0209006_115474701	3300027908	Forest Soil	VLEQHRSREGHRTFAATSEIDTAFSQTNDPQQGARLVRAFLRINDPRVRVEVVQMVEKIGHAPAVSQP
Ga0308309_103847961	3300028906	Soil	MLEQDSGRKDHHKFAVSSPFEMNLSQTNDPQEGARLVRAFLRITDPGVRSAIVQMVETMGSASSES
Ga0316363_102647332	3300030659	Peatlands Soil	MLGQDAGRKAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVHMVEKVGSAAPADC
Ga0310038_101753072	3300030707	Peatlands Soil	MLEQGTGRIAHRTFAASSEIETGLSQVNDPKQGARLVRAFLRITDPRVRLAIVQMVENVESAPADRDRPRYEG
Ga0307482_11282932	3300030730	Hardwood Forest Soil	MLARDVSGKAHRKFAASSAIEAGLSQINDPKQGARLIRAFLRITDPRVRLAIVQMAEKVGSASADC
Ga0307476_101551703	3300031715	Hardwood Forest Soil	MWARDASRKAHCKFAASDAIEAGLSQINDPKQGARLIRAFVRITDPRVRLAIVQMVEKTGNAAADC
Ga0307476_111608371	3300031715	Hardwood Forest Soil	MLEQDAGREAHRTFAASSAIETGLSQINDPKQGARLVRAFLRITDPTVRLAIVYMVEKVGSAPADR
Ga0307474_108159921	3300031718	Hardwood Forest Soil	MWARDASRKAHCKFAASDAIEAGLSQINDPKQGARLIRAFLRITDPRVSLAIVQMVEKIGYAPADC
Ga0307474_109654532	3300031718	Hardwood Forest Soil	MLEQDAGRTAHRKFAVSSAIETGLSQINDPKQGARLVRAFLRIANPAVRLAIVQMVEKVVPAPAES
Ga0307475_115872021	3300031754	Hardwood Forest Soil	FLVVPLRVCAMLEQDAGRRAHRKFAASSAIETGLSQINDPKQGARLVRAFLRITDPAVRLAIVHMVEKVGSAAPADC
Ga0307478_110162151	3300031823	Hardwood Forest Soil	MWARDASRKAHCKFAASDAIEAGLSQINDPKQGARLIRAFLRITDPRVRLAIVQMVEKVGSASADC
Ga0307478_118250481	3300031823	Hardwood Forest Soil	RTTHRKFAASSAIETGLSQINDPKQGARLVRAFLRITNPAVRLAIVQMVEKVGSAPAES
Ga0307479_118839141	3300031962	Hardwood Forest Soil	MLEQDAGRIADRTFAASSAIETGLSQINDPKQGAQLIRAFLRITDPGVRLAIVQMVQKIGYAPADC
Ga0318562_105471221	3300032008	Soil	MFEQAAGRKAHHTFAATSEIETGLSQIHDPKQGARLVRAFLRITDPSLRLAIVQMVESIGAAPAECAEIGRS
Ga0318563_105288551	3300032009	Soil	HHTFAATSEIETGLSQIHDPKQGARLVRAFLRITDPSLRLAIVQMVESIGAAPAECAEIGRS
Ga0311301_100861033	3300032160	Peatlands Soil	MLEQGTGRIAHRTFAASSEIETGLSQVNDPKQGARLVRAFLRITDPRVRLAIVQMVENVGSAPADRDRPRYEG
Ga0335074_100586512	3300032895	Soil	MLAEDAGRNAHRKFDPSSAVGTGPSPANDPQQGARLVRAFLRITDPMLRLAIVQMVEKAGSPPVADC
Ga0335074_101357173	3300032895	Soil	MLEQDVGRRTHRKLAAPSTLEPGLSGTGDPQQGARLVRAFLRIADPRVRLAIVNMVEKMESVRTDC
Ga0335074_101857171	3300032895	Soil	MSVRDAGRKVHRRFGASAEIETGLSQLDDPQQGARLVRAFLRITDPTVRLAIVDMVEKVGSTPAYN
Ga0335074_101924573	3300032895	Soil	LEQDAGQKAHRKFSAPAALGMDLPRANDPQQGARLVRAFLRITDPRVRLAIVHMVEKMESAPADC
Ga0335074_102112224	3300032895	Soil	MLEQEAGRKARGKFAASFTLDTGLSQTNDPQQGARLVRAFLRIADPRVRLAIVHMVEQMESAPADA
Ga0335074_104350222	3300032895	Soil	MLAEGAGRKAHRKFDVSSAIETGLSSINDPQQGARLVRAFLRIADPRIRLAIVQMVEKAGSATADC
Ga0335074_109410262	3300032895	Soil	MLAEGAGRKAHRKFDVSSAIETGFSSINDPQQGARLVRAFLRIADPRIRLAIVQMVEKAGSATADC
Ga0335075_101068102	3300032896	Soil	MLAEDAGRNAHRKFDASSTIETGLAQINDPKLGARLVRAFLRITDPRLRLAIVQMVEKAGSAAADC
Ga0335075_101439002	3300032896	Soil	MLAEDAGRNAHRKFDAPSAIEAGLAQVNDPKLGARLVRAFLQIADPRLRLAIVQMVEKAGSAAADC
Ga0335075_101583974	3300032896	Soil	VEQDAGQKLHRKFGAPSTLETGLPRANDPHQGARLIRAFLRITDPRVRLAIVNLVEKMESAPADC
Ga0335075_110790051	3300032896	Soil	LEQDAGQKAHRKFGASSALETDLSRANDPRQGARLVRAFLRITDPRVRLAIVHMVEKMESAAADC
Ga0335072_105035561	3300032898	Soil	MLEEDSEPKAQRKFAAPSALEPSLPQTCDPQEGARLIRAFLRVADPGVRSAIVEMVEKMGAASADC
Ga0335072_108170641	3300032898	Soil	GQKAHRKFSAPAALGMDLPRANDPQQGARLVRAFLRITDPRVRLAIVHMVEKMESAPADC
Ga0335072_113973503	3300032898	Soil	MLAQDSGGKAHRKFGASSAIEPDLSQVDDPRQGARLIRAFLGISDARIRHAVVQMVEELGSVPTGPLGGGATG
Ga0335073_106375042	3300033134	Soil	MLAEEAGRKAHRKFGPAPAIEPAPSQINDPQQGARLVRAFLRIADPRLRLAIVQMVEKAASPVAADC
Ga0335073_108173683	3300033134	Soil	TRRYPQLEQDAGQKAHRKFGASSALETDLSRANDPRQGARLVRAFLRITDPRVRLAIVHMVEKMEFAAADC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences