Metagenome Family F045824

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045824
Family Type	Metagenome
Number of Sequences	152
Average Sequence Length	81 residues
Representative Sequence	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Number of Associated Samples	101
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.41 %
% of genes near scaffold ends (potentially truncated)	35.53 %
% of genes from short scaffolds (< 2000 bps)	81.58 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.526 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (13.816 % of family members)
Environment Ontology (ENVO)	Unclassified (63.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.605 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.12% β-sheet: 0.00% Coil/Unstructured: 34.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF04392	ABC_sub_bind	3.95
PF12244	DUF3606	3.95
PF03401	TctC	1.97
PF08401	ArdcN	1.97
PF07238	PilZ	1.97
PF01464	SLT	1.97
PF00155	Aminotran_1_2	1.32
PF04972	BON	1.32
PF13936	HTH_38	1.32
PF13192	Thioredoxin_3	0.66
PF13787	HXXEE	0.66
PF14361	RsbRD_N	0.66
PF00149	Metallophos	0.66
PF05433	Rick_17kDa_Anti	0.66
PF00581	Rhodanese	0.66
PF04851	ResIII	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.95
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.97
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
All Organisms	root	All Organisms	39.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
cellular organisms	root	All Organisms → cellular organisms	39.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	12.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.66 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.29 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
unclassified Zetaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.66 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.66 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Thiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae	3.29 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.66 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Thiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus	3.29 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.29 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.53 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	12.50 %
Thiobacillus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	3.29 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002076\|JGI24749J21850_1046532	Not Available	642	Open in IMG/M
3300004114\|Ga0062593_102225536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	615	Open in IMG/M
3300004479\|Ga0062595_101156271	Not Available	682	Open in IMG/M
3300005288\|Ga0065714_10515948	Not Available	515	Open in IMG/M
3300005290\|Ga0065712_10180275	Not Available	1184	Open in IMG/M
3300005328\|Ga0070676_10562700	Not Available	817	Open in IMG/M
3300005328\|Ga0070676_10744247	Not Available	719	Open in IMG/M
3300005328\|Ga0070676_10760977	Not Available	712	Open in IMG/M
3300005330\|Ga0070690_100012079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5072	Open in IMG/M
3300005330\|Ga0070690_100834559	Not Available	717	Open in IMG/M
3300005331\|Ga0070670_100081939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2772	Open in IMG/M
3300005331\|Ga0070670_100084819	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	2721	Open in IMG/M
3300005331\|Ga0070670_100304946	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005331\|Ga0070670_101106642	Not Available	722	Open in IMG/M
3300005331\|Ga0070670_101150088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	708	Open in IMG/M
3300005333\|Ga0070677_10062921	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1536	Open in IMG/M
3300005333\|Ga0070677_10206297	Not Available	952	Open in IMG/M
3300005334\|Ga0068869_100027258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3981	Open in IMG/M
3300005334\|Ga0068869_100339709	Not Available	1222	Open in IMG/M
3300005335\|Ga0070666_10075341	All Organisms → cellular organisms → Bacteria → Proteobacteria	2300	Open in IMG/M
3300005340\|Ga0070689_101473381	Not Available	616	Open in IMG/M
3300005343\|Ga0070687_100705831	Not Available	705	Open in IMG/M
3300005353\|Ga0070669_101115519	Not Available	680	Open in IMG/M
3300005353\|Ga0070669_101860251	Not Available	525	Open in IMG/M
3300005353\|Ga0070669_101908988	Not Available	519	Open in IMG/M
3300005354\|Ga0070675_100242267	Not Available	1576	Open in IMG/M
3300005354\|Ga0070675_101265525	Not Available	679	Open in IMG/M
3300005355\|Ga0070671_100602436	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	949	Open in IMG/M
3300005356\|Ga0070674_100016116	All Organisms → cellular organisms → Bacteria → Proteobacteria	4682	Open in IMG/M
3300005356\|Ga0070674_100177523	Not Available	1628	Open in IMG/M
3300005365\|Ga0070688_100029276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3296	Open in IMG/M
3300005365\|Ga0070688_101155383	Not Available	621	Open in IMG/M
3300005438\|Ga0070701_10456631	Not Available	821	Open in IMG/M
3300005441\|Ga0070700_100420380	Not Available	1010	Open in IMG/M
3300005456\|Ga0070678_100979142	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	776	Open in IMG/M
3300005457\|Ga0070662_101762475	Not Available	535	Open in IMG/M
3300005459\|Ga0068867_100017541	All Organisms → cellular organisms → Bacteria → Proteobacteria	5083	Open in IMG/M
3300005459\|Ga0068867_102000904	Not Available	548	Open in IMG/M
3300005526\|Ga0073909_10576290	Not Available	553	Open in IMG/M
3300005543\|Ga0070672_100007484	All Organisms → cellular organisms → Bacteria	7413	Open in IMG/M
3300005543\|Ga0070672_101993832	Not Available	523	Open in IMG/M
3300005544\|Ga0070686_100988074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	690	Open in IMG/M
3300005548\|Ga0070665_101693097	Not Available	640	Open in IMG/M
3300005577\|Ga0068857_100922983	Not Available	838	Open in IMG/M
3300005616\|Ga0068852_101303207	Not Available	748	Open in IMG/M
3300005618\|Ga0068864_100142494	Not Available	2163	Open in IMG/M
3300005719\|Ga0068861_100023062	All Organisms → cellular organisms → Bacteria → Proteobacteria	4488	Open in IMG/M
3300005840\|Ga0068870_10610044	Not Available	743	Open in IMG/M
3300005841\|Ga0068863_100175522	Not Available	2056	Open in IMG/M
3300005841\|Ga0068863_100547199	Not Available	1143	Open in IMG/M
3300005841\|Ga0068863_100875933	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	897	Open in IMG/M
3300005841\|Ga0068863_101187944	Not Available	769	Open in IMG/M
3300005844\|Ga0068862_100230360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1680	Open in IMG/M
3300005844\|Ga0068862_100791160	Not Available	925	Open in IMG/M
3300006237\|Ga0097621_100297615	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1424	Open in IMG/M
3300006358\|Ga0068871_102124716	Not Available	535	Open in IMG/M
3300009011\|Ga0105251_10513205	Not Available	561	Open in IMG/M
3300009094\|Ga0111539_10751564	Not Available	1135	Open in IMG/M
3300009098\|Ga0105245_12850050	Not Available	536	Open in IMG/M
3300009101\|Ga0105247_11865764	Not Available	502	Open in IMG/M
3300009176\|Ga0105242_11018728	Not Available	837	Open in IMG/M
3300009177\|Ga0105248_10187840	All Organisms → cellular organisms → Bacteria → Proteobacteria	2328	Open in IMG/M
3300009177\|Ga0105248_10364214	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300009553\|Ga0105249_10084582	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	2955	Open in IMG/M
3300009553\|Ga0105249_11365936	Not Available	780	Open in IMG/M
3300010403\|Ga0134123_12627966	Not Available	571	Open in IMG/M
3300012892\|Ga0157294_10039901	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300012893\|Ga0157284_10048087	Not Available	963	Open in IMG/M
3300012902\|Ga0157291_10227680	Not Available	607	Open in IMG/M
3300012904\|Ga0157282_10086787	Not Available	850	Open in IMG/M
3300012958\|Ga0164299_10463096	Not Available	833	Open in IMG/M
3300012960\|Ga0164301_10748563	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	741	Open in IMG/M
3300012985\|Ga0164308_12096768	Not Available	527	Open in IMG/M
3300013296\|Ga0157374_12026767	Not Available	602	Open in IMG/M
3300013296\|Ga0157374_12085082	Not Available	594	Open in IMG/M
3300013297\|Ga0157378_10049624	All Organisms → cellular organisms → Bacteria → Proteobacteria	3734	Open in IMG/M
3300013297\|Ga0157378_10218105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1812	Open in IMG/M
3300013306\|Ga0163162_12047537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	656	Open in IMG/M
3300013308\|Ga0157375_10190231	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300013308\|Ga0157375_12665719	Not Available	597	Open in IMG/M
3300014325\|Ga0163163_11650628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	702	Open in IMG/M
3300014325\|Ga0163163_12781218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	546	Open in IMG/M
3300014745\|Ga0157377_11460746	Not Available	542	Open in IMG/M
3300014968\|Ga0157379_10377104	Not Available	1301	Open in IMG/M
3300014969\|Ga0157376_12611287	Not Available	545	Open in IMG/M
3300014969\|Ga0157376_12921389	Not Available	517	Open in IMG/M
3300015077\|Ga0173483_10303155	Not Available	783	Open in IMG/M
3300017792\|Ga0163161_10222369	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300017792\|Ga0163161_11147151	Not Available	670	Open in IMG/M
3300017965\|Ga0190266_10099531	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1190	Open in IMG/M
3300018067\|Ga0184611_1153311	Not Available	816	Open in IMG/M
3300018073\|Ga0184624_10057789	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1588	Open in IMG/M
3300018073\|Ga0184624_10271082	Not Available	761	Open in IMG/M
3300018083\|Ga0184628_10106920	Not Available	1441	Open in IMG/M
3300018083\|Ga0184628_10302786	Not Available	840	Open in IMG/M
3300018083\|Ga0184628_10488699	Not Available	638	Open in IMG/M
3300018476\|Ga0190274_11189063	Not Available	846	Open in IMG/M
3300018476\|Ga0190274_11599104	Not Available	744	Open in IMG/M
3300019356\|Ga0173481_10283452	Not Available	762	Open in IMG/M
3300019356\|Ga0173481_10449882	Not Available	643	Open in IMG/M
3300019362\|Ga0173479_10031459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300021082\|Ga0210380_10037429	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300021082\|Ga0210380_10070395	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300021082\|Ga0210380_10099297	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1286	Open in IMG/M
3300022756\|Ga0222622_10015779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3731	Open in IMG/M
3300022756\|Ga0222622_10392669	Not Available	975	Open in IMG/M
3300022756\|Ga0222622_10453790	Not Available	910	Open in IMG/M
3300023263\|Ga0247800_1122655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	542	Open in IMG/M
3300025315\|Ga0207697_10175939	Not Available	937	Open in IMG/M
3300025893\|Ga0207682_10047675	Not Available	1765	Open in IMG/M
3300025899\|Ga0207642_10019539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2625	Open in IMG/M
3300025899\|Ga0207642_10068325	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1681	Open in IMG/M
3300025901\|Ga0207688_10016806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3972	Open in IMG/M
3300025901\|Ga0207688_10102147	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300025907\|Ga0207645_10099851	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1872	Open in IMG/M
3300025907\|Ga0207645_10913151	Not Available	596	Open in IMG/M
3300025908\|Ga0207643_10097695	Not Available	1719	Open in IMG/M
3300025910\|Ga0207684_11373473	Not Available	579	Open in IMG/M
3300025920\|Ga0207649_11053356	Not Available	641	Open in IMG/M
3300025923\|Ga0207681_10820289	Not Available	777	Open in IMG/M
3300025925\|Ga0207650_10030071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3910	Open in IMG/M
3300025925\|Ga0207650_10441834	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1081	Open in IMG/M
3300025925\|Ga0207650_11245709	Not Available	633	Open in IMG/M
3300025925\|Ga0207650_11890558	Not Available	504	Open in IMG/M
3300025926\|Ga0207659_10117847	Not Available	2030	Open in IMG/M
3300025926\|Ga0207659_10292162	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300025927\|Ga0207687_10442052	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300025930\|Ga0207701_10264034	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300025930\|Ga0207701_10369394	Not Available	1239	Open in IMG/M
3300025931\|Ga0207644_10139951	Not Available	1863	Open in IMG/M
3300025931\|Ga0207644_10416944	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1099	Open in IMG/M
3300025936\|Ga0207670_10920657	Not Available	733	Open in IMG/M
3300025937\|Ga0207669_10029545	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	3033	Open in IMG/M
3300025937\|Ga0207669_11387963	Not Available	598	Open in IMG/M
3300025942\|Ga0207689_10967293	Not Available	718	Open in IMG/M
3300025942\|Ga0207689_11480136	Not Available	567	Open in IMG/M
3300025960\|Ga0207651_10895176	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	790	Open in IMG/M
3300025961\|Ga0207712_10109999	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	2065	Open in IMG/M
3300025986\|Ga0207658_10124096	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300025986\|Ga0207658_10266909	Not Available	1461	Open in IMG/M
3300026035\|Ga0207703_10747940	Not Available	931	Open in IMG/M
3300026067\|Ga0207678_10949674	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300026067\|Ga0207678_11687394	Not Available	557	Open in IMG/M
3300026075\|Ga0207708_10701099	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	865	Open in IMG/M
3300026089\|Ga0207648_10073446	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	2980	Open in IMG/M
3300026116\|Ga0207674_10095095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2966	Open in IMG/M
3300026118\|Ga0207675_100234553	Not Available	1771	Open in IMG/M
3300027907\|Ga0207428_10825174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	658	Open in IMG/M
3300031716\|Ga0310813_11199563	Not Available	699	Open in IMG/M
3300031858\|Ga0310892_11095676	Not Available	565	Open in IMG/M
3300034150\|Ga0364933_154983	Not Available	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	67.76%
Environmental	Environmental	32.24%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	67.76%
Terrestrial	Environmental → Terrestrial	24.34%
Aquatic	Environmental → Aquatic	7.89%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	42.76%
Soil	Environmental → Terrestrial → Soil	23.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.37%
Sediment	Environmental → Aquatic → Sediment	5.92%
Roots	Host-Associated → Plants → Roots	2.63%
Freshwater	Environmental → Aquatic → Freshwater	1.97%
Floodplain	Environmental → Terrestrial → Floodplain	0.66%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	28.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.47%
Loam	Environmental → Terrestrial → Soil → Loam	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.66%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	28.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	13.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	11.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24749J21850_10465322	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRK
Ga0062593_1022255361	3300004114	Soil	CKSATCQRSCMPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0062595_1011562712	3300004479	Soil	MDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0065714_105159481	3300005288	Miscanthus Rhizosphere	TVNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKNTRLRA*
Ga0065712_101802752	3300005290	Miscanthus Rhizosphere	VDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070676_105627002	3300005328	Miscanthus Rhizosphere	VDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAK
Ga0070676_107442471	3300005328	Miscanthus Rhizosphere	PVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070676_107609771	3300005328	Miscanthus Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYER
Ga0070690_1000120791	3300005330	Switchgrass Rhizosphere	PVRNPRGLARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY*
Ga0070690_1008345592	3300005330	Switchgrass Rhizosphere	ATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070670_1000819391	3300005331	Switchgrass Rhizosphere	VDQNPPVRNPRGLARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY*
Ga0070670_1000848191	3300005331	Switchgrass Rhizosphere	MDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKT
Ga0070670_1003049463	3300005331	Switchgrass Rhizosphere	MDLSDRRAYEIWRAMTLSGTKESLERLPGDIVELAMDFSHFPAAWKVIAGKALVYERKTGKRKR*
Ga0070670_1011066422	3300005331	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKATDLSDHRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGQRKR*
Ga0070670_1011500881	3300005331	Switchgrass Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070677_100629212	3300005333	Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070677_102062971	3300005333	Miscanthus Rhizosphere	VDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIARKALAYERKAVKRKR*
Ga0068869_1000272583	3300005334	Miscanthus Rhizosphere	TCKSATCRRSCMPEATMDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0068869_1003397092	3300005334	Miscanthus Rhizosphere	VCRHKTVNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070666_100753415	3300005335	Switchgrass Rhizosphere	LSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIARKALAYERKAVKRKR*
Ga0070689_1014733811	3300005340	Switchgrass Rhizosphere	MLRVCRHKTFNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070687_1007058312	3300005343	Switchgrass Rhizosphere	LSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070669_1011155191	3300005353	Switchgrass Rhizosphere	ARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0070669_1018602511	3300005353	Switchgrass Rhizosphere	VCRHKTVNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAK
Ga0070669_1019089882	3300005353	Switchgrass Rhizosphere	DLSDQRAYEIWRAIKLSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0070675_1002422671	3300005354	Miscanthus Rhizosphere	MDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH*
Ga0070675_1012655252	3300005354	Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0070671_1006024361	3300005355	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKH*
Ga0070674_1000161165	3300005356	Miscanthus Rhizosphere	VAQNPPVRNLRALARKVALKKAMDLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR*
Ga0070674_1001775232	3300005356	Miscanthus Rhizosphere	MPEATMDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070688_1000292765	3300005365	Switchgrass Rhizosphere	VDQNPPVRNPRGLARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDVVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY*
Ga0070688_1011553832	3300005365	Switchgrass Rhizosphere	VCRHKTVNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070701_104566311	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPEATMDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070700_1004203802	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	CKSATCRRSCMPEATMDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070678_1009791421	3300005456	Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAY
Ga0070662_1017624751	3300005457	Corn Rhizosphere	MEQNPPVRNLRGLARKIALKKAMDLSDQRAYEIGRAMKLSGTKESLERLPGDIVELAMDFSHFPAAWKVIAN
Ga0068867_1000175412	3300005459	Miscanthus Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALA*
Ga0068867_1020009041	3300005459	Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0073909_105762901	3300005526	Surface Soil	VDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGSKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKIGKRK
Ga0070672_1000074842	3300005543	Miscanthus Rhizosphere	LKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0070672_1019938322	3300005543	Miscanthus Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRK
Ga0070686_1009880741	3300005544	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0070665_1016930972	3300005548	Switchgrass Rhizosphere	MPEATMDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAY
Ga0068857_1009229831	3300005577	Corn Rhizosphere	QRAYEIWRALKLTGTKESLEGLSGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0068852_1013032071	3300005616	Corn Rhizosphere	MDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERNTAKRK
Ga0068864_1001424944	3300005618	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH*
Ga0068861_1000230629	3300005719	Switchgrass Rhizosphere	LKKAVDLSDQRAYEIWRALKLTGTKESLEGLSGNIVQLAMDFSHFPAAWKVIANKALAYERKSGKRKR*
Ga0068870_106100441	3300005840	Miscanthus Rhizosphere	RGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0068863_1001755224	3300005841	Switchgrass Rhizosphere	EATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH*
Ga0068863_1005471992	3300005841	Switchgrass Rhizosphere	LSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYERKTIKRKR*
Ga0068863_1008759331	3300005841	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERK
Ga0068863_1011879441	3300005841	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKATDLSDHRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTG
Ga0068862_1002303601	3300005844	Switchgrass Rhizosphere	DLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR*
Ga0068862_1007911601	3300005844	Switchgrass Rhizosphere	MDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0097621_1002976153	3300006237	Miscanthus Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0068871_1021247161	3300006358	Miscanthus Rhizosphere	VDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKG*
Ga0105251_105132051	3300009011	Switchgrass Rhizosphere	LARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY*
Ga0111539_107515642	3300009094	Populus Rhizosphere	LARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR*
Ga0105245_128500501	3300009098	Miscanthus Rhizosphere	ARKVALKKAMDLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR*
Ga0105247_118657641	3300009101	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYER
Ga0105242_110187281	3300009176	Miscanthus Rhizosphere	LARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0105248_101878403	3300009177	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTG
Ga0105248_103642142	3300009177	Switchgrass Rhizosphere	MPEATMDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKSGKRKR*
Ga0105249_100845824	3300009553	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGQRKR*
Ga0105249_113659361	3300009553	Switchgrass Rhizosphere	DLSDQRAYEIWRAIKLSGTKESLEGLPGNLVQLAMNFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0134123_126279661	3300010403	Terrestrial Soil	LARNVALKNAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIARKALAYERKAVKRKR*
Ga0157294_100399011	3300012892	Soil	LARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKG*
Ga0157284_100480872	3300012893	Soil	MPEATMDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLVGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0157291_102276801	3300012902	Soil	IRIPQIRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR*
Ga0157282_100867871	3300012904	Soil	LARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQMAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0164299_104630961	3300012958	Soil	LARKVALKKAADLSDQRAYEIWRAIKRSGSKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0164301_107485632	3300012960	Soil	SDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0164308_120967682	3300012985	Soil	LARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEELRDDIAQLAMDFSHFLAAWKVIAKKALAYERKTGKR
Ga0157374_120267672	3300013296	Miscanthus Rhizosphere	LARKVALKKATDLSDQRAYEIWRAIKLSGTKESRKELPRDIVQLAMDFSHFPDAWKVIAKKALAYE
Ga0157374_120850821	3300013296	Miscanthus Rhizosphere	QNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0157378_100496243	3300013297	Miscanthus Rhizosphere	MPEAPLDQKPPVRDLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0157378_102181053	3300013297	Miscanthus Rhizosphere	LARNVALKKAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIARKALAYERKAVKRKR*
Ga0163162_120475371	3300013306	Switchgrass Rhizosphere	MDLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR*
Ga0157375_101902311	3300013308	Miscanthus Rhizosphere	LARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH*
Ga0157375_126657192	3300013308	Miscanthus Rhizosphere	LARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0163163_116506282	3300014325	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0163163_127812182	3300014325	Switchgrass Rhizosphere	FNVDQNPPVRNPRGLARKVALKKAIDMSDQRAYEIWRALKLTGTKESLEGLSGNIVQLAMDFSHFPAAWKVIANKALAYERKSGKRKR*
Ga0157377_114607461	3300014745	Miscanthus Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0157379_103771042	3300014968	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR*
Ga0157376_126112872	3300014969	Miscanthus Rhizosphere	LARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLQGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKS*
Ga0157376_129213892	3300014969	Miscanthus Rhizosphere	DQNPPVRKLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTNESLEGLPDNIVQLALDFSHFPDAWKVIAKKALAYERNIANR*
Ga0173483_103031552	3300015077	Soil	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR*
Ga0163161_102223692	3300017792	Switchgrass Rhizosphere	VCRHKTVNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0163161_111471512	3300017792	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH
Ga0190266_100995312	3300017965	Soil	MDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAMKLSGTKESLKGLPSAIVQLAMDYSHFPDAWKVIANKALAYERKTGKWKS
Ga0184611_11533112	3300018067	Groundwater Sediment	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPSAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0184624_100577893	3300018073	Groundwater Sediment	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKQ
Ga0184624_102710821	3300018073	Groundwater Sediment	LARKVALKKAADLSDQRAYEIWRAIKLSGTNESLEGLPDNIVQLALDFSHFPDAWKVIAKKALAYERNIANR
Ga0184628_101069203	3300018083	Groundwater Sediment	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRTIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH
Ga0184628_103027861	3300018083	Groundwater Sediment	VDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLQGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0184628_104886991	3300018083	Groundwater Sediment	MDQNPPVRNLRGLARKVALKKAIDLSEQRAYEIWRAIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTG
Ga0190274_111890632	3300018476	Soil	MPEATMDQNPPVRNLRALARKVALKKAIDLSDQRAYEIWRTIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKG
Ga0190274_115991041	3300018476	Soil	LARKVALKKAVDLSYQRAYEIWRAIKLSGTKESLEGLPGDVVQLATDFSHFPAAWKVIAKKALAYERKTGKRKR
Ga0173481_102834521	3300019356	Soil	MDQNPPVRNLRGLERKVELKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR
Ga0173481_104498821	3300019356	Soil	VDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTNESLEGLPDNIVQLALDFSHFPDAWKVIAKKALAYERNIANR
Ga0173479_100314592	3300019362	Soil	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR
Ga0210380_100374292	3300021082	Groundwater Sediment	VDQNPPVRNLRGLARKAALKKAIDLSDQRAYEIWRAMKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKIGKRKR
Ga0210380_100703953	3300021082	Groundwater Sediment	LARNVALKKAVDLSDQRAYEIWRAIKLSGTKESLEGLPGDVVQLATDFSHFPAAWKVIAKKALAYERKTGKRKR
Ga0210380_100992972	3300021082	Groundwater Sediment	MDQKPPIRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0222622_100157795	3300022756	Groundwater Sediment	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0222622_103926692	3300022756	Groundwater Sediment	MPEATMDQNPPVRNLRGLARKVALKKAADSSEQRAYEIWRAIKRSGTEESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAPER
Ga0222622_104537901	3300022756	Groundwater Sediment	VDQNPPVRNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLERLPGDVVQLATDFSHFPAAWKVIAKKALAYERKTSKRKR
Ga0247800_11226551	3300023263	Soil	KAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR
Ga0207697_101759391	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0207682_100476752	3300025893	Miscanthus Rhizosphere	VDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0207642_100195394	3300025899	Miscanthus Rhizosphere	DRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY
Ga0207642_100683252	3300025899	Miscanthus Rhizosphere	MDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0207688_100168065	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR
Ga0207688_101021472	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0207645_100998512	3300025907	Miscanthus Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0207645_109131511	3300025907	Miscanthus Rhizosphere	KVFNVDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207643_100976953	3300025908	Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKATDLSDHRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207684_113734731	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPEATMDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR
Ga0207649_110533561	3300025920	Corn Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERNIANR
Ga0207681_108202892	3300025923	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207650_100300712	3300025925	Switchgrass Rhizosphere	VDQNPPVRNPRGLARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY
Ga0207650_104418342	3300025925	Switchgrass Rhizosphere	LARKVALKKAIDLSDQRAYEIWRAIKLSGTKESLQGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207650_112457091	3300025925	Switchgrass Rhizosphere	VDQNPPVRNLRGLARKVALKKAMDLSDRRAYEIWRAMKLSGTKESLERLPGDIVELAMDFSHFPAAWKVIAGKALVYERKTGKRKR
Ga0207650_118905582	3300025925	Switchgrass Rhizosphere	ADLSDQRAYEIWRAIKLSGTNESLEGLPDNIVQLALDFSHFPDAWKVIAKKALAYERNIANR
Ga0207659_101178473	3300025926	Miscanthus Rhizosphere	MDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH
Ga0207659_102921621	3300025926	Miscanthus Rhizosphere	KAADLSDQRAYEIWRAIKLSGTNESLEGLPDNIVQLALDFSHFPDAWKVIAKKALAYERNIANR
Ga0207687_104420522	3300025927	Miscanthus Rhizosphere	LARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY
Ga0207701_102640342	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VAQNPPVRNLRALARKVALKKAMDLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR
Ga0207701_103693943	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VTNLRGLARKVALKKAIDLSDQRAYEIWRAIKLSGTKESIEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207644_101399511	3300025931	Switchgrass Rhizosphere	VDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHYPTAWKVIARKALAYERKAVKRKR
Ga0207644_104169442	3300025931	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKH
Ga0207670_109206572	3300025936	Switchgrass Rhizosphere	MLRVCRHKTFNVDQNRPVRNLRGLARNVALKKAVDLSDQRAYEIWRALKLTGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0207669_100295452	3300025937	Miscanthus Rhizosphere	MPEATMDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0207669_113879631	3300025937	Miscanthus Rhizosphere	MDLSDQRAYEIWCAIKLSGTKESLEGLPGDIVQLAMDFSHFPAAWKVIANKALAYERKTGKRKR
Ga0207689_109672931	3300025942	Miscanthus Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207689_114801361	3300025942	Miscanthus Rhizosphere	RRSCMPEATMDQNPPVRNLRELARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0207651_108951762	3300025960	Switchgrass Rhizosphere	MDQKPPVRNLRVLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRK
Ga0207712_101099991	3300025961	Switchgrass Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKGSGTKESLEGLPDAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKR
Ga0207658_101240964	3300025986	Switchgrass Rhizosphere	LARNVALKKAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYEHKAVKRKR
Ga0207658_102669091	3300025986	Switchgrass Rhizosphere	MPEATMDQNPPVRNLRGLARKVALKKATDLSDHRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKH
Ga0207703_107479402	3300026035	Switchgrass Rhizosphere	LARNVALKKAVDLSDQRAYEIWHALKLMGTKESLDGLSGDIVQLAMDFSHFPTAWKVIAKKALAYERKSGKRKR
Ga0207678_109496742	3300026067	Corn Rhizosphere	LARKVALKKAIDLSDQRAYEIWRAIKLSGTKESSEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTG
Ga0207678_116873941	3300026067	Corn Rhizosphere	GLARKVALKKAIDRSDQRAYEIWRAIMLSGTKESLEGLPSDIVQLAMQFSHFPAAWKAIAKKALAYERKTGKRNY
Ga0207708_100708621	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0207708_107010991	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKT
Ga0207648_100734462	3300026089	Miscanthus Rhizosphere	MDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALA
Ga0207674_100950953	3300026116	Corn Rhizosphere	LARKVALKKAIDRSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSYFPDAWKVIAKKALAYERKTGKRKR
Ga0207675_1002345531	3300026118	Switchgrass Rhizosphere	ATMDQKPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGNIVQLAMDFSHFPDAWKVIAKKALAYDRKIGKRKR
Ga0207428_108251741	3300027907	Populus Rhizosphere	SDQRAYEIWRALKLTGTKESLEGLSGNIVQLAMDFSHFPAAWKVIANKALAYERKSGKRK
Ga0310813_111995631	3300031716	Soil	VDQNPPVRNLRGLARKVALKKAMDLSDRRAYEIWRVMKLSGTKESLERLPGDIVELAMDFSHFPAAWKVIAGKALAYERKTGKRKR
Ga0310892_110956761	3300031858	Soil	QRSCMPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKRSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR
Ga0364933_154983_32_307	3300034150	Sediment	MPEATMDQNPPVRNLRGLARKVALKKAADLSDQRAYEIWRAIKLSGTKESLEGLPGAIVQLAMDFSHFPDAWKVIAKKALAYERKTGKRKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F045824

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences