NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F045821

Metagenome Family F045821

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045821
Family Type Metagenome
Number of Sequences 152
Average Sequence Length 100 residues
Representative Sequence AVKAARYAVRLDSADHVGRASEAIANGWREAVPALRAISLEEDTEGGRLTFEVNLDQSAGETSTPKKVLEKLLAIPPEAQATLSITREATVLG
Number of Associated Samples 133
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 71.71 %
% of genes from short scaffolds (< 2000 bps) 67.11 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.789 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(9.211 % of family members)
Environment Ontology (ENVO) Unclassified
(33.553 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.079 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.97%    β-sheet: 30.58%    Coil/Unstructured: 45.45%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.84
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.265.1.1: Pseudouridine synthased1dj0a_1dj00.63
d.265.1.1: Pseudouridine synthased1dj0a_1dj00.63
d.265.1.2: Pseudouridine synthased2apoa22apo0.61
d.265.1.2: Pseudouridine synthased2apoa22apo0.61
d.16.1.5: FAD-linked reductases, C-terminal domaind1seza21sez0.6
d.58.4.11: Dimeric alpha+beta barreld1y0ha_1y0h0.6
d.58.57.1: Transposase IS200-liked2vjva12vjv0.6
d.16.1.5: FAD-linked reductases, C-terminal domaind1seza21sez0.6
d.58.4.11: Dimeric alpha+beta barreld1y0ha_1y0h0.6
d.58.57.1: Transposase IS200-liked2vjva12vjv0.6


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 152 Family Scaffolds
PF01242PTPS 72.37
PF15919HicB_lk_antitox 3.29
PF02604PhdYeFM_antitox 1.97
PF07494Reg_prop 1.32
PF03681Obsolete Pfam Family 1.32
PF14332DUF4388 0.66
PF01833TIG 0.66
PF10996Beta-Casp 0.66
PF01557FAA_hydrolase 0.66
PF07690MFS_1 0.66
PF07927HicA_toxin 0.66
PF13424TPR_12 0.66
PF13229Beta_helix 0.66
PF03793PASTA 0.66
PF00679EFG_C 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 152 Family Scaffolds
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 72.37
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 1.97
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 1.97
COG3292Periplasmic ligand-binding sensor domainSignal transduction mechanisms [T] 1.32
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.66


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.79 %
UnclassifiedrootN/A34.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_21141_len_1059_cov_11_739377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1109Open in IMG/M
2124908032|Perma_A_C_ConsensusfromContig128529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium705Open in IMG/M
2124908041|P3_CLC_ConsensusfromContig33119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium830Open in IMG/M
3300001661|JGI12053J15887_10358705All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300003502|JGI26143J51219_1002529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300004480|Ga0062592_101720435All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300004480|Ga0062592_102397988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300005172|Ga0066683_10407081All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300005180|Ga0066685_10173340All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300005332|Ga0066388_105569310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300005332|Ga0066388_106689930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300005337|Ga0070682_100876217All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300005444|Ga0070694_101754585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300005450|Ga0066682_10697465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300005467|Ga0070706_101616288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300005468|Ga0070707_100758465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium934Open in IMG/M
3300005468|Ga0070707_101640790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300005518|Ga0070699_101721760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300005536|Ga0070697_101177581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300005539|Ga0068853_102385576All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300005543|Ga0070672_101306986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300005546|Ga0070696_100221495All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300005556|Ga0066707_10921735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300005559|Ga0066700_10075120All Organisms → cellular organisms → Bacteria2155Open in IMG/M
3300005561|Ga0066699_10770687Not Available680Open in IMG/M
3300005578|Ga0068854_100154327All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300005598|Ga0066706_10987570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300005764|Ga0066903_100053684All Organisms → cellular organisms → Bacteria4944Open in IMG/M
3300005841|Ga0068863_100029776All Organisms → cellular organisms → Bacteria5213Open in IMG/M
3300006237|Ga0097621_100517241All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300006800|Ga0066660_11684032Not Available505Open in IMG/M
3300006881|Ga0068865_101760577All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300006894|Ga0079215_10795486All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300006904|Ga0075424_101815307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium645Open in IMG/M
3300009012|Ga0066710_100750629All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300009090|Ga0099827_10867817All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium781Open in IMG/M
3300009090|Ga0099827_11069049Not Available700Open in IMG/M
3300009094|Ga0111539_11462459All Organisms → cellular organisms → Bacteria → Proteobacteria792Open in IMG/M
3300009148|Ga0105243_11398296All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300009157|Ga0105092_10708382All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300009162|Ga0075423_11148058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium828Open in IMG/M
3300009545|Ga0105237_11253162All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300010320|Ga0134109_10155443All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium825Open in IMG/M
3300010361|Ga0126378_11284477All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium827Open in IMG/M
3300010366|Ga0126379_11349410Not Available819Open in IMG/M
3300010398|Ga0126383_13620384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300011269|Ga0137392_11340913Not Available574Open in IMG/M
3300012349|Ga0137387_10744084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → Calothrix elsteri → Calothrix elsteri CCALA 953709Open in IMG/M
3300012354|Ga0137366_10081623All Organisms → cellular organisms → Bacteria → Proteobacteria2459Open in IMG/M
3300012354|Ga0137366_10678563All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia735Open in IMG/M
3300012355|Ga0137369_10742513Not Available672Open in IMG/M
3300012358|Ga0137368_10742642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300012360|Ga0137375_10111796All Organisms → cellular organisms → Bacteria2752Open in IMG/M
3300012360|Ga0137375_10196199All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1916Open in IMG/M
3300012360|Ga0137375_10748244Not Available792Open in IMG/M
3300012505|Ga0157339_1023283All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300012532|Ga0137373_10816565Not Available688Open in IMG/M
3300012532|Ga0137373_11185669All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300012931|Ga0153915_10446390All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1471Open in IMG/M
3300012948|Ga0126375_10622501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium828Open in IMG/M
3300012948|Ga0126375_11996927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300012951|Ga0164300_10578789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300013296|Ga0157374_12786363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300013503|Ga0120127_10095114All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300014885|Ga0180063_1188965Not Available661Open in IMG/M
3300015085|Ga0167632_1025765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300015162|Ga0167653_1034615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium934Open in IMG/M
3300015357|Ga0134072_10456083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300015359|Ga0134085_10261197All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300015374|Ga0132255_100734802All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300015374|Ga0132255_102964519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300017656|Ga0134112_10436775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300017927|Ga0187824_10130276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium824Open in IMG/M
3300017930|Ga0187825_10106475All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium973Open in IMG/M
3300017959|Ga0187779_10940651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300017997|Ga0184610_1054794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1188Open in IMG/M
3300018056|Ga0184623_10341874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300018060|Ga0187765_11029653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingopyxis → Parasphingopyxis algicola567Open in IMG/M
3300018068|Ga0184636_1247028Not Available634Open in IMG/M
3300018075|Ga0184632_10028494All Organisms → cellular organisms → Bacteria2380Open in IMG/M
3300018082|Ga0184639_10037426All Organisms → cellular organisms → Bacteria → Acidobacteria2487Open in IMG/M
3300018429|Ga0190272_11759573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300019874|Ga0193744_1108892Not Available508Open in IMG/M
3300021432|Ga0210384_10200008All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1796Open in IMG/M
3300025918|Ga0207662_10880001All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae634Open in IMG/M
3300025922|Ga0207646_11000960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium739Open in IMG/M
3300025922|Ga0207646_11725351All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300025923|Ga0207681_10083677All Organisms → cellular organisms → Bacteria2259Open in IMG/M
3300025949|Ga0207667_11826151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300025981|Ga0207640_10330972All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300026095|Ga0207676_10116350All Organisms → cellular organisms → Bacteria2246Open in IMG/M
3300027360|Ga0209969_1002289All Organisms → cellular organisms → Bacteria2639Open in IMG/M
3300027378|Ga0209981_1017246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1019Open in IMG/M
3300027639|Ga0209387_1190010All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300027748|Ga0209689_1084601All Organisms → cellular organisms → Bacteria1671Open in IMG/M
3300028047|Ga0209526_10130194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1767Open in IMG/M
3300028803|Ga0307281_10343063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300031247|Ga0265340_10077500All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300031561|Ga0318528_10789021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300031640|Ga0318555_10230440All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300031713|Ga0318496_10496307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300031779|Ga0318566_10468657All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300031820|Ga0307473_11078892All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300031846|Ga0318512_10503744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300032008|Ga0318562_10538622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300032205|Ga0307472_102531035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300033004|Ga0335084_11580493All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300033805|Ga0314864_0034920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1106Open in IMG/M
3300033814|Ga0364930_0149997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300033815|Ga0364946_121464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300034165|Ga0364942_0125030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales836Open in IMG/M
3300034773|Ga0364936_072954Not Available650Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.21%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.26%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.29%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment3.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.29%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.97%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.97%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.32%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.32%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.32%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.32%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.66%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.66%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.66%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.66%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.66%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.66%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.66%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300003502Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PMHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014299Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1EnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015085Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015162Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027360Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M
3300034773Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_009022002088090004SoilLSKAVKSARYVVRLDSAEHVTRAGDALANSWRESVPALRAFSLEADERGARLRFEINLDQSAGETSTPKKVLETLLAIPPEAQASLSVTREATVLA
Perma_A_C_021106902124908032SoilRYVVRLDSAEHVTRAGDALANSWRESVPALRAFSLEADERGARLRFEINLDQSAGETSTPKKVLETLLAIPPEAQASLSVTREATVLA
P3_CLC_000627302124908041SoilRLDSAEHVTRAGDALANSWRESVPALRAFSLEADERGARLRFEINLDQSAGETSTPKKVLETLLAIPPEAQASLSVTREATVLA
F12B_1026935723300000443SoilPAGLEVCRVRELATGEPSLAKAVKAARYSVRLDSDAHAERATSALESSWKTALPALRALALESDETGMRLTFEVNMGQAAGETATAKKVLXXXXXCPPAEQASMSVVREATVLG*
JGI12053J15887_1035870513300001661Forest SoilGIGVLEVRELGPGEPTLSRAVKGARYAVRLASEDHLARAGEAIVNGWREAVPALRALSVESGPEGSRLRFEVNLDQAAGETATPKKVLERLLAIPPEQQAMLSVTREATVLG*
JGI26143J51219_100252913300003502Arabidopsis Thaliana RhizosphereRYAVRLDSAEQVGRAAEAIDNGWREAMPALRALXLEGDELCFEVNLDQSAGETATAKKVLETLLGVPPEAQATLSVTRRATVLG*
Ga0062592_10172043513300004480SoilVRPLGPQDPALSKAVKSARYVVRLVSAEQVGRANEAISNGWREAVPALRALALDLDGSLTFEVNLDQSAGETSTPKKVLEALLSIPPEAQASLSVTREATVL
Ga0062592_10239798813300004480SoilRYLVRLVSAEQVGRANEAISNGWREAMPALRALALEADGALTFEVNLDQSAGETSTPKKVLEKLLAIPPEAQASLSVTREATVLG*
Ga0062594_10305451623300005093SoilKAVKGARYSVRLDSEEHLGRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0066683_1040708113300005172SoilDSSVQIARAGEAVANGWSDSVPALRSLSLEADERGTRLSFEINLDQSAGETSTPKKVLETLLSIPPEAQASLSVTREATVLA*
Ga0066685_1017334033300005180SoilLSVSGVRELASTEPALSRAVKSARYAVRLESADQVGRASEAIANGWREAVPALRAISLDEDARGGQLTFEVNLDQSAGETSTPRKVLEKLLSIPPEAQATLSITREATVLG*
Ga0070676_1042402613300005328Miscanthus RhizosphereKAVKGARYSVRLDSEEHVGRAAEALGQPWRDAMPALRSMALAADASGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0066388_10556931023300005332Tropical Forest SoilEEQVARAGEALAEGWRDAMPALRTLSLEADGSGASLRFEVNLDQAAGETATAKKVLEALLSIPPHEQTALSVVREATVLR*
Ga0066388_10668993023300005332Tropical Forest SoilKAARYAVRLDSEAHVARAGEALADGAREALPALRALSLETGADGASLRFEVNLDQAAGETATAKKVLERLLAIPPSEQLALAITREATVLG*
Ga0070682_10087621713300005337Corn RhizosphereLDPQEPALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0070691_1083986713300005341Corn, Switchgrass And Miscanthus RhizosphereEPSLAKAVKGARYSVRLDSEEHVERATGALENSWRESMPALRAFALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG*
Ga0070675_10121833623300005354Miscanthus RhizosphereAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLAIPPEAQAGMSVVREATVLAG*
Ga0070694_10175458513300005444Corn, Switchgrass And Miscanthus RhizosphereRYAVRLDSAEQIGRAAEAIENGWREAMPALRAVSLEGEELCFEVNLDQSAGETATAKKVLETLLGVPPEAQATLSVTREATVLG*
Ga0066682_1069746513300005450SoilEYVARAGEALANGWRERAPALRAFALEADGSGARLRFEVNLDQSAGETSTPKKILETLLSIPPEVQASLSVTREATVLG*
Ga0070706_10063407513300005467Corn, Switchgrass And Miscanthus RhizosphereKLPAGLRVVHVNELSPAEPALSKAVKGARYAVHLDSPEYIERAGEALSNGWSQMMPALRAFALEADSAQTRLRFEVNLDQSAGPTATARKVLETLLAIPPEAQAALTITREATVLG*
Ga0070706_10161628823300005467Corn, Switchgrass And Miscanthus RhizosphereEEHVERATGALENSWRESMPALRAFALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG*
Ga0070707_10075846513300005468Corn, Switchgrass And Miscanthus RhizosphereRAISDKLPPGLSVSEVRELAPGEPALSRAVKSARYAVRLESADQVGRASEAIANGWREAVPALRALSLESDAAGMRLTFEVNLDQSAGETSTPKKVLEALLAIPPEGQATLSITREATVLG*
Ga0070707_10164079023300005468Corn, Switchgrass And Miscanthus RhizosphereSVRLATEEQIARAGEVLASGAGDAMPAVRAFALEADRDGTSLRFEVNLDQSSGETSTPKKVLETLLAIPPAEQLSLSVTREATLLG*
Ga0070699_10172176013300005518Corn, Switchgrass And Miscanthus RhizosphereSPADPALSKAVKSARYVVRLDSAEHVTRASDALANGWREAVPALRAFSLEADERGARLRFEINLDQSAGETSTPKKVLERLLAIPPEAQACLSVTREATVLGT*
Ga0070697_10117758123300005536Corn, Switchgrass And Miscanthus RhizosphereAVRLESADQVGRASEAIANGWREAVPALRALSLESDAAGMRLTFEVNLDQSAGETSTPKKVLEALLAIPPEGQATLSITREATVLG*
Ga0068853_10238557613300005539Corn RhizosphereRCLDPQEPALSKSVKSARYLVRLASAVQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0070672_10130698623300005543Miscanthus RhizosphereDSEEHLGRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0070696_10022149513300005546Corn, Switchgrass And Miscanthus RhizosphereDSPDHIGRATEALANGWRETMPAVQAFALETDREGARLRFEVNLDQSAGPTATPKKVLETLLAIPPEAQATLSVTREATMLA*
Ga0066707_1092173523300005556SoilRYAVRLDSPEQIARAGEVVANGWSDSVPALRSFSLEADGLGTRLRFEINLDQAAGETSTPKKVLEKLLSMPPEAQACLSVTREATVLA*
Ga0066700_1007512053300005559SoilAVKAARYAVRLDSADHVGRASEAIANGWREAVPALRAISLEEDTEGGRLTFEVNLDQSAGETSTPKKVLEKLLAIPPEAQATLSITREATVLG*
Ga0066699_1077068713300005561SoilAAGAISEKLPRGLSVSDVRELAATEPALSRAVKSARYAVRLESADQVGRASEAIANGWRETVPALRAISLEEDAEGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG*
Ga0068854_10015432713300005578Corn RhizosphereLSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0068854_10128304613300005578Corn RhizosphereLPPGLAVLDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0066706_1098757023300005598SoilNQKLPPGIAVLEVRELLPGESALSKAVKSARYAVRLDSPEQIARAGEAVATGWSDSVPALRSFSLEADGLGTRLRFEINLDQAAGETSTPKKVLEKLLSMPPEAQACLSVTREATVLA*
Ga0066903_10005368413300005764Tropical Forest SoilAVLELRPLSAAEPPLSKAVKSARYAVRLESGEQIDRAGKALADGWRERVPALKSFALESNAEGARLSFEINLDQSAGDTSTPKKVLETLLSIAPEAQAALSVTREATILG*
Ga0066903_10432866123300005764Tropical Forest SoilDEVFDVEGIAPFPADAAARIGAKLPPGVDVLAVRALAPGEPPLSKAVKAARYVVRLDSEEHLRRAGDALANGWREAVPALRAMSLEADGAAMRLRFEVNLDQSAGETATAKKVLEGLLAIPPGEQAAMSVVREATVLG*
Ga0068851_1070058013300005834Corn RhizosphereRLDSEEHLGRASEALGGEWRRNMPALRALAIRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0068863_10002977613300005841Switchgrass RhizosphereEDQVSRAGDAVAEGWREAMPALRALSLEADAAGASLRFEVNLDQAAGETATAKKVLETLLAIPPEAQASMSVVREATVLA*
Ga0068858_10000884773300005842Switchgrass RhizosphereAKAVKGARYSVRLATEEQIARAGEVLASGAGDAMPAVRAFALEADRDGTSLRFEVNLDQSSGETSTPKKVLETLLAIPPAEQLSLSVTREATLLG*
Ga0068860_10224278313300005843Switchgrass RhizosphereKAVKGARYSVRLDSEEHLGRASEALGGAWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0097621_10051724113300006237Miscanthus RhizosphereRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0066660_1168403223300006800SoilSEKLPRGLSVSDVRELAATEPALSRAVKSARYAVRLESADQVGRASEAIANGWRETVPALRAISLEEDAEGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG*
Ga0068865_10176057723300006881Miscanthus RhizosphereIAARLPAGLSVSDVRCLDPQEPALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0079215_1079548613300006894Agricultural SoilDVRELGAADPALSKSVKAARYAVRLEEPEHIGRASDAIANGWREAVPALRAIALEENASSTGARLTFEVNLDQSAGETSTPKKVLEALLAIPPEAQASLSVTREATVLG*
Ga0075424_10181530713300006904Populus RhizospherePPGLRALEVRTLESTERSLSRAITAARYAVRLDSDEQVERASAAISEGWRESMPALKELGLETDAIGAKLLFEINLDQSAGETTTPKKVLEALLAIPPAEQAALSVTREATVLR*
Ga0066710_10075062933300009012Grasslands SoilSARYAVRLDSPEQIARAGEVVANGWSDSVPALRSLSLEADERGTRLSFEINLDQSAGETSTPKKVLETLLSIPPEAQASLSVTREATVLA
Ga0099827_1086781713300009090Vadose Zone SoilDVDANGPFGSAAAGLINAKLPAGLSVREVRELSFAEPALSKAIKSARYAVRLDSPAQIERASEAVANGWPDALPALRSLTLDADPGGTRLRFEVNLDQSAGPTATAKKILETLLAIPPEAQASLSITREATVLA*
Ga0099827_1106904923300009090Vadose Zone SoilALSKAVKGARYAVRLDCPEQIARAGEALANGWSETMPALRAFAIEAEPSGARLRFEVNLDQSSGPTATAKKILETLLAIPPEAQAALSVTREATLLG*
Ga0111539_1146245923300009094Populus RhizosphereEAPLSRAVKGARYSVRLDDAEQIGRATEAIAGQWRDRVPALQALSLDTDASGARLRFEVNLDASAGETSTPKKVLEKLLAIPPEAQASLSVTREGTLLS*
Ga0105245_1269859813300009098Miscanthus RhizosphereVREASLAKAVKGARYSVRLATEEQIARAGEVLANGAGDAMPAVRAFALEADRDGTSLRFEVNLDQSSGETSTPKKVLETLLAIPPAEQL
Ga0105243_1139829623300009148Miscanthus RhizosphereAEAISAKLPPGLSVSEVRPLGSQEPALSKAVKSARYLVRLVSPEQVGRASEAISNGWRDAVPALRALALEADGALTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQALLSVTREATVLG*
Ga0105092_1070838213300009157Freshwater SedimentISDKLPPGLAVLDVRELAAADAALSKSVKSARYAVRLEEPEHVGRASEAIANGWREAVPALRSIALEENPSRTGARLTFEVNLDQSAGETSTPKKVIEALLAIPPEAQASLSVTREATVLG*
Ga0075423_1114805813300009162Populus RhizosphereAVKSARYAVRLESADQVGRASEAIENGWRETVPALRALSLESDEAGTRLTFEVNLDQSAGVTSTPKKVLEKLLAIPPEAQSTLSITREATVLG*
Ga0105237_1125316223300009545Corn RhizospherePAGLSVSDVRCLDPQEPALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0126374_1147362923300009792Tropical Forest SoilRASDALANGWSDQLPALRALSLEADGAAMRLRFEVNMDQAAGETATAKKVLEGLLAIPPAEQAAMSIVREATVLG*
Ga0105059_104766823300009795Groundwater SandVKGARYTVRLDSEEQVSRASEALANGWSRTVPALRALALEADAAGTNLIFEVNLDQAAGETATAKKVLEALLAIPAQDQVSMSVVRQATVLGGQTGLESQR*
Ga0134109_1015544313300010320Grasslands SoilLSRAVKSARYAVRLESADQVGRASEAIANGWREAVPALRAISLDEDARGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG*
Ga0126378_1128447713300010361Tropical Forest SoilPLSKAVKSARYAVRLESGEQIDRAGKALADGWRERVPALKSFALESNAEGARLSFEINLDQSAGDTSTPKKVLETLLSIAPEAQAALSVTREATILG*
Ga0126379_1134941023300010366Tropical Forest SoilSKSVRGARYTVRLDSAGQIERARDAVANGWRESLPAVRALALDASPSGTHLTFEVNLDQSAGPTVTAKKVVETLLSIPSEAQVSLSITREATLLD*
Ga0126381_10315083323300010376Tropical Forest SoilLHVTEIRELSPSEPSLSKLVAGARYAVELPSPELVERAHEAIAGAWRESLPALKAMSLEGRGDSPQLRFEVNLDQAAGPTATARNVLETLLAIPPEAQAALSVTREATVLKI*
Ga0126383_1331419313300010398Tropical Forest SoilGLEVLEVRELAPSEPPLSKAVKGARYSVRLDSAEHVGRATEAIADGRRTSLPALRALSLDADATGTRLTFEVNLDQAAGETATAKKVLEALLAVPPEAQASMSVVREATVLAG*
Ga0126383_1362038413300010398Tropical Forest SoilINEKLPPGLAVLELRPLLPAEPALSKSVKSARYAVRLESGEHIDRAGEALANGWRERVPALKALAVESDAEGARLRFEINLDQSAGETSTPKKVLETLLSIPADAQAGLSVTREATILG*
Ga0134121_1142792313300010401Terrestrial SoilLAAGEATLAKAVKGARYSVRLDSEEHLGRASEALGGEWRRSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0137392_1134091313300011269Vadose Zone SoilKLPDGLRVLEVRALSPAEPALSKAVRGARYAVRLDSPEHVARAGEAVANGWSETMPALRSFALEADPAQARLRFEVNLDQSAGPTATAKKVLETLLAIPPEDQAALSVTREATLLA*
Ga0137380_1176650523300012206Vadose Zone SoilSPAEPTLSKAVKAARYAVRLDAPEHVARAGEALANGWSETMPALRALTLEAESSGARLCFEVNLDQASGPTATAKKVLEALLAIPPEAQAGLAITREATVLS*
Ga0137387_1074408413300012349Vadose Zone SoilLPPGLSVSEVRELGSTEPALSRAVKSARYAVRLDSADHVGRATEAIANGWREAVPALRAISLEEDTEGGRLTFEVNLDQSAGETSTPKKVLEKLLAIPPEAQATLSITREATVLG*
Ga0137366_1008162353300012354Vadose Zone SoilGEPALSKAVKSARYAVRLDSPEHMARAAEALVNGWRDALPALRAFSLEPDASGQSLRFEINLDQSAGETSTPKKVLEALLAIAPEAQASLSVTREATVLA*
Ga0137366_1067856313300012354Vadose Zone SoilARAGEAVANGWSETMPALRAFALEAESSGARLCFEVNLDQALGPTATAKKVLETLLAIPPEAQTSLSITREATVLS*
Ga0137369_1074251333300012355Vadose Zone SoilYSVRLDCPDHISRAGEALANGWRDSVPGLRAVCLEADASGARLHFEINLDQATGETSTPKKVLEMLLSITPAAQASLSVTREATVLGETTAGL*
Ga0137368_1074264223300012358Vadose Zone SoilALYEFWSRRDPIARYAARLDSADQLGRASDAIANGWRESVPALRALSLEQDEHGARMVFEVNLDQSAGETATAKKVVEALLAIPPDAQTSLSITREATILG*
Ga0137375_1011179613300012360Vadose Zone SoilRHEVFDVEGVTPFGPDAARAISEKLPPGLSVRDVRELGSTEPALSRAVKSARYAVRLDSADQVGRASDAIANGWRESVPALRALSLEQDERGTRMVFEANLDQSAGETATAKKVVEALLAIPPDAQTSLSITREATILG*
Ga0137375_1019619933300012360Vadose Zone SoilIGRAADALANGWRDAMPALKALSLETDGAGALLLFEVNLDPSEGPTSTAKKVLESLLAIPPEAQAALPITREATLFEASKL*
Ga0137375_1074824413300012360Vadose Zone SoilRHEVFDVEGVTPFGPDAARAISEKLPPGLSVRDVRELGSTESALSRAVKSARYAVRLDSADQVGRASDAIANGWRESVPALRALSLEQDEHGARMVFEVNLDQSAGETATAKKVVEALLAIPPDAQTSLSITREATVLG*
Ga0157339_102328323300012505Arabidopsis RhizosphereATLIAGKLPAGISVLEVRELGPADRSLSKVVKSARYAVRLDSEEQIGRAGEALANGWREAVPALRAFSLEAGPDGTHLRFEVNLDQSAGETTTPKKVLERLLSMPPEAQAGMSVTREATVLE*
Ga0157352_108390223300012519Unplanted SoilVIFEHDFAHALGQFFEVFDVEGVAAFPDDAATLIAGKLPAGISVLEVRELGPADRSLSKVVKSARYAVRLDSEEQIGRAGEAVANGWREAVPALRAFSLEAGPDGTRLRFEVNLDQSAGETTTPKKV
Ga0137373_1081656513300012532Vadose Zone SoilKAVKSARYAVRLDTPEHVTRAAQALAAGRCDFLPALRAFSLEPDASGARLSFEINLDQSAGETSTAKKVLEALLAIPPEAQASLSVTREATVLG*
Ga0137373_1118566923300012532Vadose Zone SoilLELRLLGPAEAALSKAVKSARYAVLLESDQQIERAGEALANGWREKVPALRSFALEADVAGARLRFEVNLDQAAGETSTPKKILETLLSIPPQAQASLSVTREATVLG*
Ga0157300_110076113300012884SoilKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAMKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0157282_1013454413300012904SoilDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0153915_1044639033300012931Freshwater WetlandsVRLDSAEQIGRAGEALANGWREAMPALKALSLETEGERARLAFEVNLDPAAGPTATAKKVLETLLAIPPADQAAMSVVREATILG*
Ga0126375_1062250113300012948Tropical Forest SoilKAVKGARYSVRLATEEQIARAGDALANGWRDAMPAVLTFALDADREGTRLRFEVNLDQSAGETSTPKKVLETLLAIPPAEQLSLSVTREATLLA*
Ga0126375_1199692713300012948Tropical Forest SoilVRSARYAVRLESEAQIGRAGEALANGWRERVPALKTLALENDAEGARLRFEINLDQSAGETSTPKKVLEALLSIPPDAQASLSVTREATILG*
Ga0164300_1057878923300012951SoilSDAAEAIAARLPAGLSVSDVRCLDPQEPALSKSVKSARYLVRVASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG*
Ga0157374_1278636323300013296Miscanthus RhizosphereLATEEQIARAGEVLASGAGDAMPAVRAFALEADRDGTSLRFEVNLDQSSGETSTPKKVLETLLAIPPAEQLSLSVTREATLLG*
Ga0163162_1238694823300013306Switchgrass RhizosphereLDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEVLGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0120127_1009511423300013503PermafrostVKGARYCVLLGSHEQIGRAGDALSEGWREAVPALRALSLETDPGGTRLRFEVNLDQSAGETSTPKKVLETLLWIPPEAQVSLSVTREATLLA*
Ga0075303_112373713300014299Natural And Restored WetlandsVRPLAAGEPSLSKAVRGARYVARLVTPEQVTRAVDAVADGWREAMPALRALSLETDASGACLRFEVNLDQAAGETATAKKVLASILAIPAEEHAA
Ga0180063_118896523300014885SoilSAEQVGRAAEAISNGWRDVVPALRALALEPNGALTFEVNLDQSAGETSTPKKVLEALLAIPPEAQASLSVTPAARVRG*
Ga0167632_102576513300015085Glacier Forefield SoilGIGVLEVRELGPAERALSRSVKGARYAVRLASEEQIARAGDAVANGWTEAVPALRALSLESGPDGSRLLFEVNLDQAAGETATPKKVLEKLLAIPPEDQAMLSVTREATVLG*
Ga0167653_103461523300015162Glacier Forefield SoilFPDDAARQVEEKLPPGIGVLEVRELGPAERALSRSVKGARYAVRLGSDEHRARADDALAGGWNAAVPALRSLSIESGPEGSRLCFEVNLDQAAGETSTPKKVLEALLAIAPEDQATLSVTREATVLG*
Ga0134072_1045608313300015357Grasslands SoilLAATEPALSRAVKSARYAVRLESADQVGRASEAIANGWREAVPALRAISLDEDARGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG*
Ga0134085_1026119723300015359Grasslands SoilSEKLPPGLSVSDVRELASTEPALSRAVKSARYAVRLESADQVGRASEAIANGWREAVPALRAISLDEDARGGRLTFEVNLDQSAGETSTPRKVLEKLLSIPPEAQATLSITREATVLG*
Ga0132255_10073480243300015374Arabidopsis RhizosphereRAGEALAKGAGATMPAVRAFALEADRGGTSLRFEVNLDQSSGETATAKTVLERLLSIPPTEQVGMSIVRETTVLG*
Ga0132255_10241269513300015374Arabidopsis RhizosphereVLDVRELAAGEATLAKAVKGARYSVRLDSEEHLGRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG*
Ga0132255_10296451913300015374Arabidopsis RhizospherePGLAVLELRELSPAEPALSKAVKSARYAVRLESGEHIDRAGDALTNGWRERVPALKAFALESDAAGARLRFEINLDQAAGETSTPKKVLEAILSIPPDAQASLSVTREATILG*
Ga0134112_1043677523300017656Grasslands SoilVLEVRELSAGEPALSKAVKSARYAVRLDSPEHVARAAEALVNGWRDALPALRAFSLEPDASGQSLRFEINLDQSAGETSTPKKVLEALLAIAPEAQASLSVTREATILG
Ga0187824_1013027633300017927Freshwater SedimentARYAVRLESDEHLRRASDAIAKGGRDAVPALRAMSLEADGTATRLRFEVNMDQAAGETATAKKVLESLLAIPPAEQAAMSVVREATVLG
Ga0187825_1010647513300017930Freshwater SedimentAVRLDSDEQIARASDAVANGWREAVPALRAMSLESAPAGTRLLFEINLDQAAGETSTPKRVLEALLAISPQDQASLSVVREATVLG
Ga0187785_1016575213300017947Tropical PeatlandLPPGIRVLSVRRLPEGEPALSKAVKAARYAVRLDADEHVRRASDAVANGGRNAVPALRAMSLETDGAAMRLRFEVNLDQSAGETATAKKVLEALLAIPPAEQAAMSVVREATVLG
Ga0187779_1094065123300017959Tropical PeatlandRLGAEGQVSRAADALSDGWREAMPALRALSLETDASGASLRFEVNMDQAAGETSTAKKVLETILAIPAPDQASLSIVREATVLG
Ga0184610_105479413300017997Groundwater SedimentAARAISEKLPPGLSVSDVRHLDPQEPALSRAVKSARYLVRLVSAEQVGRASEVISNGWREAVPALRALALEPDAGGARLTFEVNLDQSAGETSTPKKVLERLLSIPPEAQATLSITREATVLG
Ga0184623_1034187423300018056Groundwater SedimentVLEVRPLSAGEPSLAKAVKGARYSVLLGSDEQIDRAGEAVAEGWRQAVPALRSLSLEAEAQGARLRFEVNLDQSAGETSTPKKVLEALLAIPPEAQASLSVTREATLLA
Ga0187765_1102965323300018060Tropical PeatlandVVRLDSAEQIGRAGEAVAGGWRKTMPAVKAMSLDADAEGARLRFEVNLDPAAGETATAKKVLETLLAIPPEAQASLAITREVTLAS
Ga0184636_124702823300018068Groundwater SedimentSAKLPPGLWVSDVRALGPQEPALSRAVKSARYLVRLVSAEQVGRASEAIANGWREAVPALRALALEPDAGGASLTFEVNLDQSAGETSTPKKVLEALLAIPPEAQASLSVTREATVLG
Ga0184632_1002849413300018075Groundwater SedimentKSARYVVRLVSAEQVGRASEAISNGWREAVPALRALSLEPDAGGARLTFEVNLDQSAGETSTPKKVLEALLAVPPEAQASLSVTRESTVLG
Ga0184639_1003742633300018082Groundwater SedimentKSARYTVRLDAREHIERASDALANGWREAIPALRALSLEADGAGARLHFEVNLDQSAGATSTPKKVLETLLAIPPDAQVSLSVTREATVLA
Ga0190272_1175957313300018429SoilLSKSVKSARYAVRLEEPEHVGRASEAIANGWREAVPALRAIALEENQSSPGARLTFEVNLDQSAGETSTPKKVIEALLAIPPEAQASLSVTREATVLG
Ga0173481_1064598913300019356SoilRHEVFDVDANAPFPDDAAASIGAKLPPGLAVLDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAMKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0193744_110889213300019874SoilDAAALVAAKLPAGIGVLSVRELGPTDRALSKVVKSARYAVALSTEDHVSRAGDAVANGWSEAMPALKSLSLENGPLGTRLLFEVNLDQAAGQTSTPKKVLERLLAIPPEAQATLAITREATVLDTSLL
Ga0210384_1020000823300021432SoilLDCPEQIARAGEAVANGWSETMPALRAFALEADPAQTRLRFEVNLDQSAGPTATARKVLETLLAIPPEAQAALSVTREATLLA
Ga0247794_1019580023300024055SoilPFPDDAAASIGAKLPPGLAVLDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0207662_1088000123300025918Switchgrass RhizospherePALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG
Ga0207657_1099648613300025919Corn RhizosphereIYVAVALGVFGVLTVEEVIASGGTALAKAVKGARYSVRLDSEEHVERATGALENSWRESMPALRAFALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG
Ga0207646_1100096023300025922Corn, Switchgrass And Miscanthus RhizosphereYSVRLATEEQIARAGEVLASGAGDAMPAVRAFALEADRDGTSLRFEVNLDQSSGETSTPKKVLETLLAIPPAEQLSLSVTREATLLG
Ga0207646_1172535113300025922Corn, Switchgrass And Miscanthus RhizosphereSPEHVTRAGEALANGWSASVPALRAFSLEADGHGARLRFEINLDQAAGETSTPKKVLATLLAIPPEDQASLSVTREATVLV
Ga0207681_1008367733300025923Switchgrass RhizosphereCLDPQEPALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG
Ga0207681_1054700333300025923Switchgrass RhizosphereSVRLDSEEHVERAAGALENSWRESVPALRAIALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG
Ga0207689_1097516413300025942Miscanthus RhizosphereVRLDSEDHVERATGALENSWREAMPALRAIALESDASGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0207667_1182615113300025949Corn RhizosphereRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG
Ga0207668_1161349013300025972Switchgrass RhizospherePLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0207640_1033097213300025981Corn RhizosphereQEPALSKSVKSARYLVRLASAEQVDRASEAISNGWREAVPALRSLALLADGDGASLSFEVNLDQSAGETSTPKKVLEALLAIPPEAQATLSVTREATVLG
Ga0207640_1063907523300025981Corn RhizosphereLNILYLVQLLEKLPPGLAVLDVRELAAGEAPLSKAVKGARYSVRLDSEEHLGRASEALGGEWRRNMPALRALALRADGGGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0207676_1011635033300026095Switchgrass RhizosphereGRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQAAGETATAKKVLEAVLSIPPEAQASMSVVREATVLAG
Ga0207698_1019507823300026142Corn RhizosphereVKGARYSVRLDSEEHLGRASEALGGEWRQSMPALRALALEADGSGASLTFEVNLDQTAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG
Ga0209969_100228913300027360Arabidopsis Thaliana RhizosphereRLDSAEQVGRAAEAIDNGWREAMPALRALSLEGDELCFEVNLDQSAGETATAKKVLETLLGVPPEAQATLSVTRRATVLG
Ga0209981_101724633300027378Arabidopsis Thaliana RhizosphereGPDAARVINEKLPAGMLVREVRELGPAEPALSRSVKSARYAVRLDSAEQVGRAAEAIDNGWREAMPALRALSLEGDELCFEVNLDQSAGETATAKKVLETLLGVPPEAQATLSVTRRATVLG
Ga0209387_119001023300027639Agricultural SoilYAVRLEEPEHIGRASDAIANGWREAVPALRAIALEENASSTGARLTFEVNLDQSAGETSTPKKVLEALLAIPPEAQASLSVTREATVLG
Ga0209689_108460153300027748SoilPALSRAVKAARYAVRLDSADHVGRASEAIANGWREAVPALRAISLEEDTEGGRLTFEVNLDQSAGETSTPKKVLEKLLAIPPEAQATLSITREATVLG
Ga0209526_1013019423300028047Forest SoilVRELGPGEPALSRAVKGARYAVRLASEDHLARAGEAVADGWREAVPALRALSVESGPEGSRLRFEVNLDQTAGETATPKKVLERLLAIPPEQQAMLSVTREATVLE
Ga0268265_1154862813300028380Switchgrass RhizosphereRALGVGEPSLAKAVKGARYSVRLDSEEHVERATGALENSWRESMPALRAFALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG
Ga0307281_1034306323300028803SoilYAVRLDSDDQVNRAGDAVANGWRETMPALRALSLEADAAGASLRFEVNLDQSAGETASAKKVLETLLAIPPEAQASMSVVREATVLG
Ga0265340_1007750013300031247RhizosphereYTVRLATEEHVSRAGDAVADGWREAMPALRALSLEADAAGTRLRFEVNLDQAAGQTATAKKVLEGLLAIPPSEQLAMSITREATVLG
Ga0318528_1078902123300031561SoilAHVSRAADALANGWRDAMPALRTLSLETDASGASLRFEVNLDQSAGETATAKKVLEAILAIPAPEQVSLSVVREATVLG
Ga0318555_1023044013300031640SoilARYAVRLDSDEHVARAGEALADGRRGAMPALRALSLETDGSGASLRFEVNLDQAAGETATAKKVLEAILAIPAPDQTSLSVVREATVLG
Ga0318496_1049630723300031713SoilRLDSDEHVARAGEALADGRRGAMPALRALSLETDGSGASLRFEVNLDQAAGETATAKKVLEAILAIPAPDQTSLSVVREATVLG
Ga0318566_1046865713300031779SoilADAHVSRAADALANGWRDAMPALRTLSLETDASGASLRFEVNLDQSAGETATAKKVLEAILAIPAPEQVSLSVVREATVLG
Ga0307473_1107869323300031820Hardwood Forest SoilRALAAGEPSLAKAVRGARYSVRLGSHAQVDRAGDAIAGGWRDAMPALRALSLEADADGARLRFEVNLDQTAGETATAKKVLETLLAIPPAEQLSLSITREATVLG
Ga0307473_1107889223300031820Hardwood Forest SoilYAVRLDSADHVGRASEAIANGWREAVPALRAISLEEDTEGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG
Ga0318512_1050374413300031846SoilAARYSVRLGADAHVSRAADALANGWRDAMPALRTLSLETDASGASLRFEVNLDQSAGETATAKKVLEAILAIPAPEQVSLTVVREATVLG
Ga0306923_1219088513300031910SoilSLSKAVKAARYAVRLDSDEHVARAGEALADGRRGAMPALRALSLETDGSGASLRFEVNLDQAAGETATAKKVLEAILAIPAPDQTSLSVVREATVLG
Ga0318562_1053862223300032008SoilAARYSVRLGADAHVSRAADALANGWRDAMPALRTLSLETDASGASLRFEVNLDQSAGETATAKKVLEAILAIPAPEQVSLSVVREATVLG
Ga0307472_10253103513300032205Hardwood Forest SoilRELSPAEPALSKAVKSARYAVRLESGEHIDRAGDALANGWQERVPALKTFALESDAAGARLRFEINLDQSAGETSTPKKVLEALLSIPPDAQAGLSVTREATILG
Ga0310896_1078740123300032211SoilLGIAEPSLAKAVKGARYSVRLDSEEHVERATGALENSWRESMPALRAFALEADASGASLTFEVNLDQAAGDTATAKKVLEALLAIPPAEQAGMSITREATLLQG
Ga0335085_1190805123300032770SoilAAGEPALAKAVKAARYAVRLDDAEHLRRATDALADGWREQQPALRALSLESGADGVRLCFEVNLDQAAGETATAKKVLESLLALTPEALVAMPVVREATILAG
Ga0335084_1158049313300033004SoilVRLGSEAHVARAGDALADGWRESVPALRALSLEADPEGARLCFEVNLDQAAGETATAKRVLETLLAIPPSEQLALSITREATVLG
Ga0247829_1140471213300033550SoilAARQIGEKLPAGISILDVRELPAGELTLAKAVKGARYAVRLESPEQVDRASDALRAGWRETMPALRALSLEADASGASLRFEVNLDQAAGETATARKVLETLLAIPPEAQTALSVVREATLLG
Ga0314864_0034920_844_11013300033805PeatlandVRLDAGDHVSRAADAVADGWRDAMPALRMLSLETDASGAHLRFEVNLDQAAGETATAKKVLEALLAIPAPDQASLSVVREATVLG
Ga0364930_0149997_11_2743300033814SedimentVRLEEPEHVGRASEVVANGWREAVPALRAIALESDDAGAGARLTFEVNLDQAAGETSTPKKVIEALLAIPPEAQAFLSVVREATVLA
Ga0364946_121464_338_5893300033815SedimentEPEHVGRASEVVANGWREAVPALRAIALESDDAGAGARLTFEVNLDQAAGETSTPKKVIEALLAIPPEAQAFLSVVREATVLA
Ga0364942_0125030_507_8273300034165SedimentVRALDPQEPALSRAVKSARYLVRLVSADQVGRASEAISNGWREALPALRAISLEEDAKGGRLTFEVNLDQSAGETSTPKKVLEKLLSIPPEAQATLSITREATVLG
Ga0364934_0070524_1_3483300034178SedimentLPTGISILDVRELAPGEPSLAKAVKGARYAVRLDSEDQVNRAGDAVANGWREAMPALRAFSLEADAAGASLRFEVNLDQTAGETATAKKVLETLLAIPPEAQASMSVVREATVLG
Ga0364936_072954_376_6483300034773SedimentGARYSVRLESEDHVGRAGDALADGWREAMPALRALSLEADGQGASLRFEVNLDQSAGETTTPKKVLEALLAIPPEAQLSLSVVRETTVLG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.