Metagenome / Metatranscriptome Family F045776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	46 residues
Representative Sequence	VRRLPATTVYYGLSFGLRLPTWVVMSVYLVSELHLSPLQLVLMG
Number of Associated Samples	130
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.92 %
% of genes near scaffold ends (potentially truncated)	99.34 %
% of genes from short scaffolds (< 2000 bps)	97.37 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.026 % of family members)
Environment Ontology (ENVO)	Unclassified (30.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF00583	Acetyltransf_1	35.53
PF01061	ABC2_membrane	22.37
PF13649	Methyltransf_25	9.21
PF08241	Methyltransf_11	4.61
PF12847	Methyltransf_18	2.63
PF13673	Acetyltransf_10	2.63
PF13489	Methyltransf_23	2.63
PF00005	ABC_tran	1.97
PF13672	PP2C_2	0.66
PF01833	TIG	0.66
PF01557	FAA_hydrolase	0.66
PF13508	Acetyltransf_7	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.42 %
Unclassified	root	N/A	12.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.66 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.66 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.84 %
Unclassified	root	N/A	12.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.26 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.32 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.66 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.66 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Unclassified	root	N/A	12.50 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.26 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.32 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.66 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.66 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.45 %
Unclassified	root	N/A	12.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.32 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.32 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.66 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.45 %
Unclassified	root	N/A	12.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.32 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.32 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.45 %
Unclassified	root	N/A	12.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.32 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.32 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.45 %
Unclassified	root	N/A	12.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	1.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.32 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.32 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.66 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.66 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig63040	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300000880\|AL20A1W_1224590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1330	Open in IMG/M
3300000955\|JGI1027J12803_109609232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300000956\|JGI10216J12902_104057056	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300000956\|JGI10216J12902_108124427	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300000956\|JGI10216J12902_112702838	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300004081\|Ga0063454_100111129	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300004157\|Ga0062590_101863510	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300004479\|Ga0062595_100835909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	765	Open in IMG/M
3300005161\|Ga0066807_1038156	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005166\|Ga0066674_10529357	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300005177\|Ga0066690_10929373	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005332\|Ga0066388_101898800	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005333\|Ga0070677_10578872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	619	Open in IMG/M
3300005337\|Ga0070682_101798435	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300005367\|Ga0070667_101552523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005438\|Ga0070701_10090410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1676	Open in IMG/M
3300005441\|Ga0070700_101849768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	521	Open in IMG/M
3300005445\|Ga0070708_100640359	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300005445\|Ga0070708_100736138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300005458\|Ga0070681_11912790	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005553\|Ga0066695_10626773	All Organisms → cellular organisms → Bacteria → Terrabacteria group	641	Open in IMG/M
3300005555\|Ga0066692_10150431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300005558\|Ga0066698_11027121	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005560\|Ga0066670_10497747	Not Available	749	Open in IMG/M
3300005563\|Ga0068855_100239632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2027	Open in IMG/M
3300005563\|Ga0068855_102214108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	551	Open in IMG/M
3300005577\|Ga0068857_102549674	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300005614\|Ga0068856_102156515	Not Available	566	Open in IMG/M
3300005614\|Ga0068856_102303625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300005713\|Ga0066905_102145947	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005764\|Ga0066903_100902944	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005764\|Ga0066903_105703269	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005842\|Ga0068858_102312953	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005874\|Ga0075288_1057486	Not Available	610	Open in IMG/M
3300006028\|Ga0070717_11327414	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006042\|Ga0075368_10187300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300006046\|Ga0066652_101450413	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006046\|Ga0066652_101588338	Not Available	602	Open in IMG/M
3300006358\|Ga0068871_102375174	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006578\|Ga0074059_12123298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300006605\|Ga0074057_11290146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300006755\|Ga0079222_12395336	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006791\|Ga0066653_10760939	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006845\|Ga0075421_100006698	All Organisms → cellular organisms → Bacteria	14082	Open in IMG/M
3300006845\|Ga0075421_101161796	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006853\|Ga0075420_100189451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1798	Open in IMG/M
3300009093\|Ga0105240_12717295	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300009098\|Ga0105245_12507445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300009137\|Ga0066709_100403048	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300009137\|Ga0066709_103788540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300009148\|Ga0105243_12672243	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300009176\|Ga0105242_10178091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1874	Open in IMG/M
3300009176\|Ga0105242_12016286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300009789\|Ga0126307_11570118	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300009792\|Ga0126374_11522076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300010037\|Ga0126304_10271065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300010042\|Ga0126314_10248718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300010043\|Ga0126380_10356488	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1067	Open in IMG/M
3300010044\|Ga0126310_11090042	Not Available	635	Open in IMG/M
3300010322\|Ga0134084_10214797	All Organisms → cellular organisms → Bacteria → Terrabacteria group	679	Open in IMG/M
3300010333\|Ga0134080_10651025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300010361\|Ga0126378_10438792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1420	Open in IMG/M
3300010364\|Ga0134066_10065369	Not Available	975	Open in IMG/M
3300010366\|Ga0126379_11403035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300010399\|Ga0134127_10667500	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1076	Open in IMG/M
3300010403\|Ga0134123_10851764	All Organisms → cellular organisms → Bacteria → Terrabacteria group	912	Open in IMG/M
3300012003\|Ga0120163_1080406	All Organisms → cellular organisms → Bacteria → Terrabacteria group	735	Open in IMG/M
3300012011\|Ga0120152_1184974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300012204\|Ga0137374_10426456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300012204\|Ga0137374_10663053	Not Available	788	Open in IMG/M
3300012206\|Ga0137380_10958424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300012206\|Ga0137380_11124153	Not Available	669	Open in IMG/M
3300012208\|Ga0137376_11079896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300012354\|Ga0137366_10422723	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300012354\|Ga0137366_10589603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300012355\|Ga0137369_10428030	Not Available	949	Open in IMG/M
3300012356\|Ga0137371_10813151	All Organisms → cellular organisms → Bacteria → Terrabacteria group	712	Open in IMG/M
3300012360\|Ga0137375_10667522	Not Available	854	Open in IMG/M
3300012360\|Ga0137375_11459916	Not Available	505	Open in IMG/M
3300012891\|Ga0157305_10089525	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	740	Open in IMG/M
3300012907\|Ga0157283_10061038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300012908\|Ga0157286_10413715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012914\|Ga0157297_10457633	All Organisms → cellular organisms → Bacteria → Terrabacteria group	526	Open in IMG/M
3300012915\|Ga0157302_10062175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300012955\|Ga0164298_10849142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300012985\|Ga0164308_10854761	All Organisms → cellular organisms → Bacteria → Terrabacteria group	798	Open in IMG/M
3300012986\|Ga0164304_11246991	All Organisms → cellular organisms → Bacteria → Terrabacteria group	603	Open in IMG/M
3300012986\|Ga0164304_11824268	All Organisms → cellular organisms → Bacteria → Terrabacteria group	509	Open in IMG/M
3300012989\|Ga0164305_11009803	Not Available	708	Open in IMG/M
3300013100\|Ga0157373_10921060	All Organisms → cellular organisms → Bacteria → Terrabacteria group	649	Open in IMG/M
3300013307\|Ga0157372_13123154	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300013766\|Ga0120181_1075976	All Organisms → cellular organisms → Bacteria → Terrabacteria group	739	Open in IMG/M
3300014150\|Ga0134081_10089531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300014745\|Ga0157377_11102145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300015372\|Ga0132256_100566618	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300015372\|Ga0132256_101237560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300015373\|Ga0132257_103731497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300015374\|Ga0132255_100368190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2085	Open in IMG/M
3300018431\|Ga0066655_10660561	All Organisms → cellular organisms → Bacteria → Terrabacteria group	707	Open in IMG/M
3300018433\|Ga0066667_11838804	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300018469\|Ga0190270_12608587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300019356\|Ga0173481_10499010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	619	Open in IMG/M
3300019361\|Ga0173482_10255282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300019875\|Ga0193701_1026117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198	Open in IMG/M
3300020062\|Ga0193724_1092933	Not Available	618	Open in IMG/M
3300023077\|Ga0247802_1009203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300024254\|Ga0247661_1090991	All Organisms → cellular organisms → Bacteria → Terrabacteria group	575	Open in IMG/M
3300024284\|Ga0247671_1026659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	873	Open in IMG/M
3300025916\|Ga0207663_10882859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300025922\|Ga0207646_11546236	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300025927\|Ga0207687_11068142	All Organisms → cellular organisms → Bacteria → Terrabacteria group	693	Open in IMG/M
3300025929\|Ga0207664_11861507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	524	Open in IMG/M
3300025935\|Ga0207709_10285372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300025960\|Ga0207651_11773668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300025981\|Ga0207640_10962033	All Organisms → cellular organisms → Bacteria → Terrabacteria group	749	Open in IMG/M
3300026075\|Ga0207708_10676057	All Organisms → cellular organisms → Bacteria → Terrabacteria group	881	Open in IMG/M
3300026121\|Ga0207683_10488134	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1137	Open in IMG/M
3300026121\|Ga0207683_10896521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	823	Open in IMG/M
3300027821\|Ga0209811_10211685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300027909\|Ga0209382_10340523	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1682	Open in IMG/M
3300028380\|Ga0268265_11414665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300028556\|Ga0265337_1165336	Not Available	600	Open in IMG/M
3300028705\|Ga0307276_10123322	Not Available	643	Open in IMG/M
3300028707\|Ga0307291_1005433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2722	Open in IMG/M
3300028711\|Ga0307293_10222681	Not Available	600	Open in IMG/M
3300028713\|Ga0307303_10017609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300028713\|Ga0307303_10153377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300028744\|Ga0307318_10166899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300028755\|Ga0307316_10136784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300028771\|Ga0307320_10178000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300028787\|Ga0307323_10062246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300028787\|Ga0307323_10345888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300028799\|Ga0307284_10106710	Not Available	1052	Open in IMG/M
3300028799\|Ga0307284_10118930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1001	Open in IMG/M
3300028824\|Ga0307310_10169121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300028824\|Ga0307310_10225812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300028872\|Ga0307314_10136966	All Organisms → cellular organisms → Bacteria → Terrabacteria group	698	Open in IMG/M
3300028878\|Ga0307278_10263002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300028880\|Ga0307300_10250636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300028884\|Ga0307308_10191104	All Organisms → cellular organisms → Bacteria → Terrabacteria group	981	Open in IMG/M
3300031199\|Ga0307495_10173315	Not Available	575	Open in IMG/M
3300031421\|Ga0308194_10077775	All Organisms → cellular organisms → Bacteria → Terrabacteria group	911	Open in IMG/M
3300031564\|Ga0318573_10725499	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300031792\|Ga0318529_10474370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300031824\|Ga0307413_11846340	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300031854\|Ga0310904_11191601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300031854\|Ga0310904_11222641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031939\|Ga0308174_11580013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300032133\|Ga0316583_10231459	Not Available	640	Open in IMG/M
3300032211\|Ga0310896_10661650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300034115\|Ga0364945_0195248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.32%
Host-Associated	Host-Associated	23.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.66%
Plants	Host-Associated → Plants	23.68%
Unclassified	Environmental → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Roots	Host-Associated → Plants → Roots	1.32%
Floodplain	Environmental → Terrestrial → Floodplain	0.66%
Unclassified	Environmental → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.66%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.66%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.66%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.32%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.66%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.66%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00395130	2124908016		VRRLPATTIYYGLNVVLRMPTWVVMAVYLVRELHLSPLQLVLMGTAMEAAVFLF
AL20A1W_12245903	3300000880	Permafrost	VRRADATRLYYMLQFIQYLPTWVVMAVYLVRTLHLSPLQLVLM
JGI1027J12803_1096092321	3300000955	Soil	VGLAEAVKRVGAEKLYYALELVLSTPTWIVMSLYLVSDLNLSPLQLVLMGTAMEA
JGI10216J12902_1040570561	3300000956	Soil	MRRVDAEKLYYALEFLLSTPTWVVTSLYLVSVLDLSPLQLVLMGTAMEASVFLC
JGI10216J12902_1081244272	3300000956	Soil	VRRADPERLYYVLQVLLAIPTWVAMAVYLVKVVDMSPLQLVLMGTAMEAT
JGI10216J12902_1127028381	3300000956	Soil	MRRVDAEKLYYALEFFLSTPTWVVTSLYLVSVLHLSPLQLVLMGTAMEASVFLC
Ga0063454_1001111293	3300004081	Soil	MRRVDAEKLYYALEFFLATPTWVVTSLYLVSVLDLSPLQLVLMGTAMEGAVFLFE
Ga0062590_1018635101	3300004157	Soil	MKRLPATTVFYGLELLLSFPTFVVMAVYLVRELHFTPLELVLMGTAME
Ga0062595_1008359092	3300004479	Soil	VKRPSAETLYYALSFALRMPTWVVMAVYLVRTLHLSPLQLVLM
Ga0066807_10381561	3300005161	Soil	MRRLPATAVFYGLEFLLSMPTWVVVAVYLVQELDFSPLQLVLMGTAMEAAVSCARFRPE*
Ga0066674_105293572	3300005166	Soil	VRRLPATTVYYGLSFGSRLPTWVVAAVYLVRELHLSPLQLVLMGT
Ga0066690_109293731	3300005177	Soil	MKRLPATTVYYGLTFGLRLPTWVVMAVYLVRELHFSPLQLVLMGTAME
Ga0066388_1018988002	3300005332	Tropical Forest Soil	MRRFRATTVYYGLSFGGYMPTWVVMAVYLVQELHLSPLQLVLMGTAMEA
Ga0070677_105788721	3300005333	Miscanthus Rhizosphere	VRRLPATAVYFGLQLGAHLPTWVVMAVYLVRELHLSPLQLVLMGTAMEA
Ga0070682_1017984351	3300005337	Corn Rhizosphere	VTRLPAKTVYYGLCFGLRLPTWVVMAVYLVRELHFSPLQLVLM
Ga0070667_1015525232	3300005367	Switchgrass Rhizosphere	VRRLPATAVYFGLQLGAHLPTWVVMAVYLVRELHLSPLQLVL
Ga0070701_100904101	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLPATTVYYGLELLLSMPTWVVMSVYLVSELDLSPLQLVLM
Ga0070700_1018497682	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLRATTVYYGLSFGGYMPTWVVMAVYLVNELHLSPLQLVL
Ga0070708_1006403592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLPATAVYFGLQLGAHLPTWVVMAVYLVRELHFSPLQLVLMGTAMEAA
Ga0070708_1007361381	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLPATTVYYGLSFGLHLPTWVVMAVYLVRELHFSPLQL
Ga0070681_119127902	3300005458	Corn Rhizosphere	MRRFGATTVYYGLSFGGYMPTWVVMSVYLVSELHLSPLQLVLMGTAMEAAV
Ga0066695_106267731	3300005553	Soil	MRRLPARPVYYGLNFVLRMPTWVVMAVYLVQELHFSPLQLVLMG
Ga0066692_101504311	3300005555	Soil	MRRLPARPVYFGLSFVLRMPTWVVMAVYLVQELHFSPLQLVLMGTAMEA
Ga0066698_110271212	3300005558	Soil	MKRLPATTVYYGLTFGLRLPTWVVMAVYLVRELHFSPLQLVLMGTAMEAAVFLFE
Ga0066670_104977472	3300005560	Soil	VKRADPTRLYYSLEFLLSMPTWVAMAVFLVSVLHFSPLQLVLMGTAME
Ga0068855_1002396321	3300005563	Corn Rhizosphere	MRPLPARGVYFALQFGAHLSTWVVMAVYLVRELHFSPLQLVLMGTAMEAAVFL
Ga0068855_1022141082	3300005563	Corn Rhizosphere	VRRLPATAVYFGLQLGAHLPTWVVMAVYLVRELHFSPLQLVLMGTAMEAAVFL
Ga0068857_1025496741	3300005577	Corn Rhizosphere	MRPLPPRAVYFGLQFGSHLPTWVVMSVYLVRELHFSPLQLVLMGTAME
Ga0068856_1021565152	3300005614	Corn Rhizosphere	VKPLPATRVYYGICCFGLHLPTWVVMAVYLVRDLHLTPLQL
Ga0068856_1023036252	3300005614	Corn Rhizosphere	VRRAEPTRLYYSLEFLLSMPTWVAMAVYLVSVLHFSPLQLVLMGTAME
Ga0066905_1021459472	3300005713	Tropical Forest Soil	VRRADAEKLYYALELATSMPTWIVMSLYLVSVLELTPLQLVLMGTAMEAAVFL
Ga0066903_1009029443	3300005764	Tropical Forest Soil	MKRLPARTVYYGLELLLRVPTWVVMSVYLVQELHLSPLQLVLMGTAME
Ga0066903_1057032691	3300005764	Tropical Forest Soil	VKRPGAERLYYWLTFVLSMPTWVVVAVYLVRDLHLTPLQLVLMGTAMEA
Ga0068858_1023129532	3300005842	Switchgrass Rhizosphere	LRPLPARAVYFGLQLGAHLPTWVVMSVYLVRELHFSPLQLVLMGTAMEAA
Ga0075288_10574861	3300005874	Rice Paddy Soil	VRPLPARPVYYGLQFGAHLPTWVVMAVYLVRELHFSP
Ga0070717_113274142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRRVGAEKLYYSLEFFLSMPTWVVVSLYLVSVLHLTPFQLVLMGTAMEASIFLFE
Ga0075368_101873001	3300006042	Populus Endosphere	MRGLRATTVYYGLSFGGYMPTWVVMAVYLVSELHL
Ga0066652_1014504131	3300006046	Soil	MKRLSATTVYYGLSFGLRMPTWVVMAVYLVRELHLSPLQLVLMGTAMEAAVF
Ga0066652_1015883381	3300006046	Soil	MRRLPATTVFYGLELLGRLPTWVVMSVYLVRELHLSPLQLVLMGTAM
Ga0068871_1023751742	3300006358	Miscanthus Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHLSPLQLVLMGTAMEAA
Ga0074059_121232981	3300006578	Soil	LRRADATRLYYALQILLSMPTWVVMAVYLVQELHLSPLQLVLMG
Ga0074057_112901462	3300006605	Soil	MRRLPATTVYYGLELLVSMPTWVVMSVYLVSELDLSPLQLVLMGT
Ga0079222_123953361	3300006755	Agricultural Soil	VKRLPATTIYYGLSFGLQLPTWVVMSVYLVSELHLSPLQLVLMGTAMEGAVFLF
Ga0066653_107609391	3300006791	Soil	MRRLPATTVFYGLELLGRLPTWVVMSVYLVRELHLSPLQLVLMGTAMEGAVF
Ga0075421_1000066981	3300006845	Populus Rhizosphere	MRRLPATTVYYGLSFGLRTPTWVVMAVYLVRELHF
Ga0075421_1011617962	3300006845	Populus Rhizosphere	MKRLPATTVFYGLEFFLSWPTWVVMAVYLVNELHLSPLQLVLMGTAMEAAV
Ga0075420_1001894511	3300006853	Populus Rhizosphere	MKRLPATTVFYGLEFFLSWPTWVVMAVYLVNELHFSPLQLVLMGT
Ga0105240_127172951	3300009093	Corn Rhizosphere	VRRADPTRLYYVLEFLLAMPTWVAMAVYLVSVLHFSPLQLVLMVTA
Ga0105245_125074451	3300009098	Miscanthus Rhizosphere	MRRAEPTRLYYALQILLSMPTWVVMAVYLVKELHLLPLQLLLMGTAMEAAVFL
Ga0066709_1004030483	3300009137	Grasslands Soil	VRRADATRLYFELQILLSMPTWVVMSVYLVQELHFPPLQLVLMGL
Ga0066709_1037885401	3300009137	Grasslands Soil	VKRADPTRLYYSLEFLLSMPTWVAMAVFLVSVLHFSPLQLVLMGTA
Ga0105243_126722432	3300009148	Miscanthus Rhizosphere	MRKADATRLYYALQILSGVPTWVVMSVYLVQELHLSPLQLVLMGT
Ga0105242_101780911	3300009176	Miscanthus Rhizosphere	MRRADATRLYYALQILLSMPTWVVMAVYLVQELHLSPLQLVLMGTA
Ga0105242_120162861	3300009176	Miscanthus Rhizosphere	VRRVDAEKLYYWLEFFLATPTWVVTSLYLVSVLDLSPLQLVLMGTAMEATVFLC
Ga0126307_115701181	3300009789	Serpentine Soil	VKRLPATTVYYGLELLLSTPTWVVVSIYLVRELHLSPLELLLM
Ga0126374_115220762	3300009792	Tropical Forest Soil	MRRLSATTVYYGLSFGTRMPTWVVMAVYLVRELHLSPLQLVLMGTAMEAAVFLF
Ga0126304_102710653	3300010037	Serpentine Soil	VKRFPATPVYYGLELALRVPTWVVMAVYLVSELHLSPVGLVLMGTAMEAAV
Ga0126314_102487181	3300010042	Serpentine Soil	MRRLSPTTVYYGLSFGGYMPTWVVMAVYLVQELHLSPLQLVLMGT
Ga0126380_103564881	3300010043	Tropical Forest Soil	MKRLAATSVYYGLSFGTNMPTWVVMAVYLVRDLHLSPLQLVLIGTAMEAAVFLFE
Ga0126310_110900421	3300010044	Serpentine Soil	VRRLPATSVYFGLELVLRVPTWVVMAVYLVSELHLSPLELVL
Ga0134084_102147971	3300010322	Grasslands Soil	MRRLSATPVYYGLSFGTRMPTWVVMAVYLVRELHFSPLHLVLM
Ga0134080_106510251	3300010333	Grasslands Soil	MIRIRRLPATTVFYGLELLDRVPTWVVMSVYLVRELHLSPLQLVLMGTAMEAS
Ga0126378_104387921	3300010361	Tropical Forest Soil	VRRFPATAVYYGLSFGGHLPTWVVMSVYLVRELHLSPLQLV
Ga0134066_100653692	3300010364	Grasslands Soil	VKRPSAETLYYGLSFALRMPTWVVMAVYLVRTLHLSPL
Ga0126379_114030351	3300010366	Tropical Forest Soil	MRRLRATTVYYGLSFVGYMPTWVVIAVYLVSELHLSPLQLVLMGTAMEAAVFA
Ga0134127_106675002	3300010399	Terrestrial Soil	MRRLPATTVYYGLELLLSAPTFVVVAVYLVSDLDLSPLQLVLMGTAMEATVF
Ga0134123_108517641	3300010403	Terrestrial Soil	MRRFGATTVYYGLSFGGYMPTWVVMSVYLVSELHLSP
Ga0120163_10804062	3300012003	Permafrost	VRRLPATSVFYALELLLRLPTWVAAAVYLVRELHFSPLQL
Ga0120152_11849741	3300012011	Permafrost	VRRLPPLRVYYGLEFFLAMPTWIVISIYLVRELHLSPL
Ga0137374_104264561	3300012204	Vadose Zone Soil	MRRPSATTVFYGLEFLLSAPAWVVIAIYLVRDLHLSPLQLVLMGTAMEASVFLFE
Ga0137374_106630531	3300012204	Vadose Zone Soil	VKRLPAVPVYYGLELLLRVPTWIVMAVYLVRELHL
Ga0137380_109584241	3300012206	Vadose Zone Soil	VTRLPALKVFYGLEFFLSMPTWIVISIYLVRDLHLSPLQLVLMGTSM
Ga0137380_111241531	3300012206	Vadose Zone Soil	VRRPSAETLYYGFSFGLRMPTWVVLAVYLVRTLHLSPLQLVLMGTAMEGA
Ga0137376_110798961	3300012208	Vadose Zone Soil	MKRLPATTVYYGLTFGLRLPTWVVMAVYLVRELHLTPLQLVLMGTAMEAAVFLF
Ga0137366_104227231	3300012354	Vadose Zone Soil	VRRADATRLYYVLQVLLFVPTWVVMAVYLVRVVHLSPLQLILMGTAMEAAVFL
Ga0137366_105896032	3300012354	Vadose Zone Soil	VRRLPATTVYYGIEFVDRLPTWVVMAVYLVRELHFSPLQLVLMGT
Ga0137369_104280301	3300012355	Vadose Zone Soil	VRRLPATSVYYALECARATPTWVVMSLYLVQVLHLSP
Ga0137371_108131511	3300012356	Vadose Zone Soil	VRRLPATTVFYGLELLDRVPTWVVMSVFLVRELHLSPLQLVLMGTAME
Ga0137375_106675221	3300012360	Vadose Zone Soil	VRRLPATSVYYALEFALATPTWVVMSLYLVQVLHLS
Ga0137375_114599162	3300012360	Vadose Zone Soil	MRRFPATTVFYGLEFFLRWPTWVVMAVYLVRELDLSPLQLVLIGTAMEGAVFLS
Ga0157305_100895251	3300012891	Soil	VRGLRATTVYYGLSFGGYMPTWVVMAVYLVNELHLSPLQLVLMGT
Ga0157283_100610381	3300012907	Soil	VRRADATRLYYVLQVLLFMPTWVVMAVYLVQTVHLSPL
Ga0157286_104137151	3300012908	Soil	MRRLPATTVYYGLELLLSAPTFVVVAVYLVSDLELSPLQLVLMGTA
Ga0157297_104576332	3300012914	Soil	MRNADATRLYYALQILSGVPTWVVMSVYLVQELHLSPLQLVLMGTAMEG
Ga0157302_100621751	3300012915	Soil	VRRPNAETLYYSLSFLSGMPTWVVMAVYLVRELHLTPLQLVLMGTA
Ga0164298_108491421	3300012955	Soil	VRRLPATAVYFGLQLGAHLPTWVVMAVYLVRELHFSPLQLVLM
Ga0164308_108547611	3300012985	Soil	MRRFGATTVYYGLSFGGYMPTWVVMSVYLVSELHLSPLQ
Ga0164304_112469911	3300012986	Soil	MRRADATRLYYALQILLSMPTWVVMAVYLVQELHLSPLQLVLMGTAM
Ga0164304_118242681	3300012986	Soil	VRRVDAERLYYALQLLLSMPTWVVVSVYLVSDLHLSP
Ga0164305_110098031	3300012989	Soil	MRHVAAEKLYYALEFFLSTPTWVVTSLYLVSVLDLTPLQLVLMGTAMEASVFLCE
Ga0157373_109210601	3300013100	Corn Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHL
Ga0157372_131231541	3300013307	Corn Rhizosphere	MRPLPARGVYFALQFGAHLPTWVVMAVYLVRELHFSP
Ga0120181_10759761	3300013766	Permafrost	MRRADPTRLYYTLQFLLFMPTWVVVAVYLVRVAHLSPLQLVLM
Ga0134081_100895313	3300014150	Grasslands Soil	VRRADAEKLYYALEFFLATPTWVVTSLYLVSVLHLSPLQLVLMGTVMEASIFLCEFP
Ga0157377_111021452	3300014745	Miscanthus Rhizosphere	MRGLRATTVYYGLSFGGYMPTWVVMAVYLVNELHLSPLQLVLMGTAMEA
Ga0132256_1005666181	3300015372	Arabidopsis Rhizosphere	VTRLPAIRVFYALEFVLATPAWVVVSLYLVRDLHLSPLELVLMGTAMEAAV
Ga0132256_1012375602	3300015372	Arabidopsis Rhizosphere	MRRLRATTFFYALELLLALPTWVVVSIYLVRELQLSPLQLVLMGTAMEA
Ga0132257_1037314971	3300015373	Arabidopsis Rhizosphere	MRRLRATTVFYALELLLALPTWVVVSIYLVRELQLSPLQLVLMGTAMEA
Ga0132255_1003681904	3300015374	Arabidopsis Rhizosphere	MRRFRATTVYYGLSFGGYMPTWVVMAVYLVQELHLSPLQLVLMGTAMEAAVFVF
Ga0066655_106605611	3300018431	Grasslands Soil	MRRLPARPVYYGLSFVLRMPTWVVMAVYLVQELHFSPLQLVLMGTVMEGV
Ga0066667_118388042	3300018433	Grasslands Soil	VRRADAEKLYYALEFFLATPTWVVTSLYLVSVLHLSPLQLVLMGTVME
Ga0190270_126085872	3300018469	Soil	MRRPSATNVYYGLQFLLYMPTWVVMAVYLVRELDLS
Ga0173481_104990102	3300019356	Soil	MKRLPATTVFYGLELLLSFPTFVVMAVYLVRELHFTPLELVLMGTAMEG
Ga0173482_102552821	3300019361	Soil	MRRADATRLYYVLQVLLFMPTWVVMAVYLVQTVHLSPL
Ga0193701_10261171	3300019875	Soil	VRLPATTVYYGLSFGSRLPTWVVMAVYLVRELHLSPLQLVLMGTAMEAAVFLF
Ga0193724_10929332	3300020062	Soil	VRPFPARAVYFGLQFGAHLPTWVVMAVYLVRELHFSPL
Ga0247802_10092031	3300023077	Soil	MRRADATRLYYVLQVLLFMPTWVVMAVYLVQTVHL
Ga0247661_10909911	3300024254	Soil	MRRFGATTVYYGLSFGGYMPTWVVMSVYLVSELHLSPLQLVLM
Ga0247671_10266591	3300024284	Soil	VKRPGAERLYYSLTFVLSMPTWVVMAVYLVRDLHLTPLQL
Ga0207663_108828591	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVDAEKLYYALEFFLATPTWVVTSLYLVSVLDLSPLQLVLMGTAMEAS
Ga0207646_115462361	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRRPSAESLYYALTFGLRMPTWVVMAVYLVRELHLSPLQLVLMGTAM
Ga0207687_110681422	3300025927	Miscanthus Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHLSPLQLVLMGTA
Ga0207664_118615072	3300025929	Agricultural Soil	VRRLPALKLFYALEVLLSMPTWVVVSIYLVRDLHLSPLQLVLMGTAMEAAVF
Ga0207709_102853723	3300025935	Miscanthus Rhizosphere	VRRLPATTVYYGLELLLSMPTWVVMSVYLVSELDLSPLQLVLMGTA
Ga0207651_117736682	3300025960	Switchgrass Rhizosphere	MRRVDAEKLYYGLEFFLATPTWVVTSLYLVSVLHLSPLQLVLMGTAM
Ga0207640_109620332	3300025981	Corn Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHLSPLQL
Ga0207708_106760572	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHFSPLQLVLMGTAMEAAIFLCE
Ga0207683_104881341	3300026121	Miscanthus Rhizosphere	MRRLPATTVYYGLELLLSAPTFVVVAVYLVSDLDLSPLQLVLMGTAMEAT
Ga0207683_108965211	3300026121	Miscanthus Rhizosphere	MRPLPARAVYFGLQFGAHLPTWVVMSVYLVRELHLSPLQLVLMGTAMEA
Ga0209811_102116851	3300027821	Surface Soil	VRRLPPTAVYFGLQLGAHLPTWVVMAVYLVRELHFS
Ga0209382_103405234	3300027909	Populus Rhizosphere	MRRLPATTVYYGLSFGLRTPTWVVMAVYLVRELHFSPL
Ga0268265_114146652	3300028380	Switchgrass Rhizosphere	MRRLPATTVYYGLELLLSAPTFVVVAVYLVSDLELSPLQLVLMGTAMEATVFL
Ga0265337_11653362	3300028556	Rhizosphere	VRRPGPEGLYYALTFVLRMPTWVVMAVYLVQKLHLTPLQLVLMGTAME
Ga0307276_101233222	3300028705	Soil	MKRLPATDVYYGLCFGLHLPTWVVMAVYLVREVHFSPLQLVL
Ga0307291_10054331	3300028707	Soil	VRRADATRLYYALKILVSMPTWVVMAVYLVQELHLSPLQL
Ga0307293_102226811	3300028711	Soil	VRRADAERLYYALELLLSAPTWVVASLYLVTELHLSPLQLVLMGTAMEGTVFL
Ga0307303_100176093	3300028713	Soil	VRPLPPRAVYFGLQFGAHLPTWVVMSVYLVRELHFSPL
Ga0307303_101533771	3300028713	Soil	VRRADATRLYYALQILVSMPTWVVMAVYLVQELHLSPLQ
Ga0307318_101668992	3300028744	Soil	MRRPAATNVYYGLQFLLYMPTWVVMAVYLVRELDLSPLELILMGT
Ga0307316_101367842	3300028755	Soil	VRRADATRLYYVLQVLLLMPTWVVMAVYLVRELNLSPLELSLIG
Ga0307320_101780002	3300028771	Soil	MTRLRATTVFYGLEFFLSWTTFVVMAVYLVNELHL
Ga0307323_100622463	3300028787	Soil	MRRLPARPVYYGLNFVLRLPTWVVMAVYLVQELHFSPLQLVLMG
Ga0307323_103458881	3300028787	Soil	MQRLPARTVYYGLEFFLRFPTWVVMAVYLVRELHFSPLQLVLMGTAMEAAVFLFEI
Ga0307284_101067102	3300028799	Soil	MRRLPATTVYYGLQVLLFVPTWVVMAVYLVRVAHLSPLQLVLMGT
Ga0307284_101189303	3300028799	Soil	VKRLPATTVYYGICNFGLHLPTWVVMAVYLVRELHFSPLQLVLMG
Ga0307310_101691211	3300028824	Soil	VRRADATRLYYALQFLLFMPTWVVVAVYLVRVLHLS
Ga0307310_102258123	3300028824	Soil	MRRLPATTVYYGLTFGLRLPTWVVMAVYLVRDLHF
Ga0307314_101369662	3300028872	Soil	MRRADPTRLYYILQLLLFVPTWVVMAVYLVRVVHL
Ga0307278_102630021	3300028878	Soil	VRRLPATTVYYGLEFALAMPTWVVISVYLVRDLHLSPLELVLMGTAMEA
Ga0307300_102506361	3300028880	Soil	VRRLPATTVYYGLSFGLRLPTWVVMSVYLVSELHLSPLQLVLMG
Ga0307308_101911042	3300028884	Soil	VKRADATRLYYALQVLLFMPTWVVMAVYLVRVLHLSPLQLILMGT
Ga0307495_101733151	3300031199	Soil	VRPLPARAVYFGIQFGAHLPTWVVMAVYLVRELHFSPLQLVLMGTAME
Ga0308194_100777751	3300031421	Soil	MRRLPARPVYYGLNFVLRLPTWVVMAVYLVQELHFSPLQLVLMGTAMEAAVFLFE
Ga0318573_107254992	3300031564	Soil	VRRADPERLYYAIEFFASTPTWVVMSLYLVSVLDLSPLQLVLMGTAMEASVF
Ga0318529_104743702	3300031792	Soil	VRRADPERLYYAIEFFASTPTWVVMSLYLVSVLDLSPLQLVLMGTAME
Ga0307413_118463402	3300031824	Rhizosphere	MRRADATRLYYALQILLSMPTWVVMSVYLVQELHLSPLQLVL
Ga0310904_111916012	3300031854	Soil	MRGLRATTVYYGLSFGGYMPTWVVMAVYLVNELHLS
Ga0310904_112226411	3300031854	Soil	MRRLPATTVYYGLELLLSAPTFVVVAVYLVSDLDLSPLQLVLMGTAMEATV
Ga0308174_115800131	3300031939	Soil	MRRLPATTVYYGLSVGSRLPTWVVMAVYLVRELHLSPLQLVLMGTAMEAA
Ga0316583_102314592	3300032133	Rhizosphere	VRRPSAETLYYGLSFGLRMPTWVVLAVYFVRELHFSPLQLI
Ga0310896_106616502	3300032211	Soil	MRRFSATAVYYGLSFGAYMPTWVVMSVYLVSELHLSPLQLVL
Ga0364945_0195248_1_111	3300034115	Sediment	MRRPSATNVYYGLQFLLYMPTWVVIAVYLVRELDLSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences