Metagenome / Metatranscriptome Family F045660

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045660
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	70 residues
Representative Sequence	RERARELRELGEAKAAAYRARRRGQPADGIVSGRQQGRLEVMTEDYLSVYLDTDQWDGRPRFEVTVN
Number of Associated Samples	124
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.00 %
% of genes near scaffold ends (potentially truncated)	96.05 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.684 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.710 % of family members)
Environment Ontology (ENVO)	Unclassified (49.342 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.868 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.26% β-sheet: 27.37% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.0: automated matches	d5ie8a_	5ie8	0.55285
e.7.1.0: automated matches	d3lv0a_	3lv0	0.54995
e.7.1.1: Inositol monophosphatase/fructose-1,6-bisphosphatase-like	d1ka1a_	1ka1	0.53868
e.7.1.1: Inositol monophosphatase/fructose-1,6-bisphosphatase-like	d2bjia_	2bji	0.53608
c.52.1.4: Restriction endonuclease BglI	d1dmua_	1dmu	0.53576

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF00919	UPF0004	49.34
PF04055	Radical_SAM	38.16
PF10719	ComFB	7.89
PF01642	MM_CoA_mutase	1.97
PF00316	FBPase	1.32
PF03772	Competence	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	49.34
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.97
COG0158	Fructose-1,6-bisphosphatase	Carbohydrate transport and metabolism [G]	1.32
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.66

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.68 %
Unclassified	root	N/A	1.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.68 %
Unclassified	root	N/A	1.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.68 %
Unclassified	root	N/A	1.32 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	73.03 %
Unclassified	root	N/A	1.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	73.03 %
Unclassified	root	N/A	1.32 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	12.50 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.26 %
Unclassified	root	N/A	1.32 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.26 %
Unclassified	root	N/A	1.32 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.26 %
Unclassified	root	N/A	1.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.95 %
Unclassified	root	N/A	1.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.50 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.95 %
Unclassified	root	N/A	1.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001116\|JGI12627J13344_104775	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300001661\|JGI12053J15887_10181686	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300002557\|JGI25381J37097_1057355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	628	Open in IMG/M
3300002561\|JGI25384J37096_10233529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	537	Open in IMG/M
3300002562\|JGI25382J37095_10202781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300002562\|JGI25382J37095_10228212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300002907\|JGI25613J43889_10034248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1439	Open in IMG/M
3300002908\|JGI25382J43887_10091545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1619	Open in IMG/M
3300002911\|JGI25390J43892_10111612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	619	Open in IMG/M
3300002912\|JGI25386J43895_10176925	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	535	Open in IMG/M
3300002915\|JGI25387J43893_1033198	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005167\|Ga0066672_10434541	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005171\|Ga0066677_10044725	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005171\|Ga0066677_10146807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1289	Open in IMG/M
3300005171\|Ga0066677_10212198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1087	Open in IMG/M
3300005175\|Ga0066673_10312559	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005406\|Ga0070703_10322208	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005441\|Ga0070700_100997602	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005444\|Ga0070694_100386495	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1093	Open in IMG/M
3300005445\|Ga0070708_101514208	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005450\|Ga0066682_10274250	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005454\|Ga0066687_10282758	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005467\|Ga0070706_101210774	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005468\|Ga0070707_101452565	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005518\|Ga0070699_100477379	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005546\|Ga0070696_100467649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	998	Open in IMG/M
3300005555\|Ga0066692_10126954	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300005557\|Ga0066704_10152635	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300005558\|Ga0066698_10227931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1281	Open in IMG/M
3300005568\|Ga0066703_10827883	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005576\|Ga0066708_10258177	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005576\|Ga0066708_10376508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	911	Open in IMG/M
3300006031\|Ga0066651_10002526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6555	Open in IMG/M
3300006031\|Ga0066651_10548696	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006046\|Ga0066652_100197662	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300006791\|Ga0066653_10003646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4814	Open in IMG/M
3300006796\|Ga0066665_11359968	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006852\|Ga0075433_11128167	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006852\|Ga0075433_11714871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	541	Open in IMG/M
3300006854\|Ga0075425_101861745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	675	Open in IMG/M
3300006914\|Ga0075436_100492999	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006914\|Ga0075436_101002355	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006954\|Ga0079219_11759440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	577	Open in IMG/M
3300007255\|Ga0099791_10393879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	666	Open in IMG/M
3300007258\|Ga0099793_10684982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300007265\|Ga0099794_10205582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1009	Open in IMG/M
3300007788\|Ga0099795_10460394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	587	Open in IMG/M
3300009012\|Ga0066710_100506803	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300009012\|Ga0066710_102248952	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300009090\|Ga0099827_11939826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	513	Open in IMG/M
3300009597\|Ga0105259_1148102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300009812\|Ga0105067_1063059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	611	Open in IMG/M
3300010128\|Ga0127486_1040900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	557	Open in IMG/M
3300010303\|Ga0134082_10414013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	578	Open in IMG/M
3300010304\|Ga0134088_10030221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2441	Open in IMG/M
3300010304\|Ga0134088_10177001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1019	Open in IMG/M
3300010304\|Ga0134088_10183355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1001	Open in IMG/M
3300010321\|Ga0134067_10081025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1088	Open in IMG/M
3300010322\|Ga0134084_10203306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	694	Open in IMG/M
3300010333\|Ga0134080_10699444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300010336\|Ga0134071_10051448	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300010336\|Ga0134071_10285371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	827	Open in IMG/M
3300010336\|Ga0134071_10482903	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	638	Open in IMG/M
3300010364\|Ga0134066_10027421	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300010371\|Ga0134125_11350901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	777	Open in IMG/M
3300010371\|Ga0134125_12452999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300010396\|Ga0134126_11001873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	936	Open in IMG/M
3300011417\|Ga0137326_1028734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1190	Open in IMG/M
3300011424\|Ga0137439_1141021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300012096\|Ga0137389_10750019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	838	Open in IMG/M
3300012175\|Ga0137321_1029240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1163	Open in IMG/M
3300012201\|Ga0137365_10659355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300012202\|Ga0137363_10888379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	756	Open in IMG/M
3300012202\|Ga0137363_10982121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	717	Open in IMG/M
3300012203\|Ga0137399_10015771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4766	Open in IMG/M
3300012203\|Ga0137399_10649581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	888	Open in IMG/M
3300012207\|Ga0137381_11744262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M
3300012208\|Ga0137376_10312379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1364	Open in IMG/M
3300012211\|Ga0137377_11232183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	678	Open in IMG/M
3300012285\|Ga0137370_10124444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1472	Open in IMG/M
3300012349\|Ga0137387_11121150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300012351\|Ga0137386_10781678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	686	Open in IMG/M
3300012362\|Ga0137361_11408062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	620	Open in IMG/M
3300012362\|Ga0137361_11546136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300012395\|Ga0134044_1092003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	534	Open in IMG/M
3300012409\|Ga0134045_1142037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	912	Open in IMG/M
3300012683\|Ga0137398_10295386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1088	Open in IMG/M
3300012685\|Ga0137397_10073285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2481	Open in IMG/M
3300012917\|Ga0137395_10024379	All Organisms → cellular organisms → Bacteria	3571	Open in IMG/M
3300012922\|Ga0137394_10178099	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300012922\|Ga0137394_11129079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	648	Open in IMG/M
3300012925\|Ga0137419_10128176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1802	Open in IMG/M
3300012929\|Ga0137404_11615106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300012930\|Ga0137407_10761406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	914	Open in IMG/M
3300012976\|Ga0134076_10001997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6218	Open in IMG/M
3300012976\|Ga0134076_10002061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6149	Open in IMG/M
3300013297\|Ga0157378_10235816	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300014150\|Ga0134081_10007566	All Organisms → cellular organisms → Bacteria	2838	Open in IMG/M
3300014154\|Ga0134075_10349314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300015358\|Ga0134089_10394463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	590	Open in IMG/M
3300015359\|Ga0134085_10033504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2009	Open in IMG/M
3300015359\|Ga0134085_10067824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1448	Open in IMG/M
3300015373\|Ga0132257_103214122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300015373\|Ga0132257_103400789	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300017656\|Ga0134112_10138262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	932	Open in IMG/M
3300018079\|Ga0184627_10533648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	600	Open in IMG/M
3300018431\|Ga0066655_10592337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300019877\|Ga0193722_1082387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	788	Open in IMG/M
3300021046\|Ga0215015_10262376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1722	Open in IMG/M
3300022756\|Ga0222622_10698073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	737	Open in IMG/M
3300025289\|Ga0209002_10664885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300025325\|Ga0209341_11048577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	594	Open in IMG/M
3300026296\|Ga0209235_1007201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6239	Open in IMG/M
3300026296\|Ga0209235_1059809	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300026298\|Ga0209236_1254292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	578	Open in IMG/M
3300026301\|Ga0209238_1024492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2280	Open in IMG/M
3300026301\|Ga0209238_1029047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2063	Open in IMG/M
3300026306\|Ga0209468_1004867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5273	Open in IMG/M
3300026308\|Ga0209265_1023146	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300026308\|Ga0209265_1055140	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1217	Open in IMG/M
3300026313\|Ga0209761_1176700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	975	Open in IMG/M
3300026317\|Ga0209154_1029047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2548	Open in IMG/M
3300026317\|Ga0209154_1033891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2332	Open in IMG/M
3300026317\|Ga0209154_1156357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	941	Open in IMG/M
3300026317\|Ga0209154_1288992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300026325\|Ga0209152_10485651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300026328\|Ga0209802_1206396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300026330\|Ga0209473_1118268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1100	Open in IMG/M
3300026334\|Ga0209377_1046809	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300026523\|Ga0209808_1169432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	801	Open in IMG/M
3300026524\|Ga0209690_1206403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300026530\|Ga0209807_1095667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1291	Open in IMG/M
3300026538\|Ga0209056_10532806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	602	Open in IMG/M
3300026540\|Ga0209376_1052007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2351	Open in IMG/M
3300026542\|Ga0209805_1330550	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	578	Open in IMG/M
3300026547\|Ga0209156_10253020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	816	Open in IMG/M
3300026548\|Ga0209161_10164337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1270	Open in IMG/M
3300026551\|Ga0209648_10011258	All Organisms → cellular organisms → Bacteria	7773	Open in IMG/M
3300027332\|Ga0209861_1036036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300027383\|Ga0209213_1103279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300027388\|Ga0208995_1025801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1022	Open in IMG/M
3300027573\|Ga0208454_1124788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300027643\|Ga0209076_1147883	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	658	Open in IMG/M
3300027882\|Ga0209590_10072172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1991	Open in IMG/M
3300027909\|Ga0209382_11839758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	588	Open in IMG/M
3300028784\|Ga0307282_10336700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	729	Open in IMG/M
3300028814\|Ga0307302_10299789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	790	Open in IMG/M
3300028878\|Ga0307278_10180740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	942	Open in IMG/M
3300031740\|Ga0307468_100999363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	736	Open in IMG/M
3300034165\|Ga0364942_0034597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.08%
Host-Associated	Host-Associated	5.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.47%
Plants	Host-Associated → Plants	5.92%
Aquatic	Environmental → Aquatic	4.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.82%
Sediment	Environmental → Aquatic → Sediment	4.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Floodplain	Environmental → Terrestrial → Floodplain	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.66%
Loam	Environmental → Terrestrial → Soil → Loam	11.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.66%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.95%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.29%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001116	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J13344_1047751	3300001116	Forest Soil	ARLPGQLGAEVIRDRARELRELGEAKAAAYRESRRGQAADGVVTGRVKAQVEVMTEDYLSVYLATDDWDGRPRFEVMVN*
JGI12053J15887_101816862	3300001661	Forest Soil	ERVPAPAIRERARELRACGEAKARGHRASRLGHRADGVTCGRGEGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR*
JGI25381J37097_10573552	3300002557	Grasslands Soil	PQIVALRARELRELGERKALAYRAAQRGRRADGVVSGRAAGRVEVVTEDYLSVYLPVDRWDGRPRCEVTVD*
JGI25384J37096_102335291	3300002561	Grasslands Soil	RELRALSDAKAAAYRQYRIGQTADGVVTGRGKGQIEVMTEDYLSVYLDTHLWDGRPRFEVTVN*
JGI25382J37095_102027812	3300002562	Grasslands Soil	ERARELRALSDAKAAAYRQHRRGQTADGVVTGRGKGQIEVMTEDYLSVYLDTHLWDGRPRFEVTVN*
JGI25382J37095_102282122	3300002562	Grasslands Soil	ARELRELGEAKQRAYHARRVGQIADGVMSGHGAGQIELVTQDYLSVYLPTAQWDGRPRCEVTVR*
JGI25613J43889_100342482	3300002907	Grasslands Soil	ARELREVGEARAAAYREQRRGQTADGVVTGRRKGQVEVMTQDYLSVYLDMHLWDGRPRFEVTVN*
JGI25382J43887_100915452	3300002908	Grasslands Soil	ARELRELGEAKQRAYRARRVGQTADGVMSGHGVGQIELVTQDYLSVYLPTAQWDGRPRCEVTVR*
JGI25382J43887_103007012	3300002908	Grasslands Soil	TGEAKARAYRARRQGERADGVVCGRQAGQVEVLTEDYLSVYLPTDQWNGRPRFEVTVR*
JGI25390J43892_101116122	3300002911	Grasslands Soil	ARELRELGEARAAEYRAHRRGQTADGVVSGRQQGRLEVMTEDYLSVYLDTDEWDGRPRFEVTVN*
JGI25386J43895_101769252	3300002912	Grasslands Soil	ARELRALGDAKARAHRGRRCGQRADGVVSGRGAGRLEVLTEDYLSVYLPVADWDGRPRFDITVS*
JGI25387J43893_10331982	3300002915	Grasslands Soil	PVPPRVLQQRARELRDLGEAKARRHHACRVGQRADGVVTGHGAGKVEVLTQDYVSVYLPTHEWNGSARFEVTVR*
Ga0066672_104345411	3300005167	Soil	RQRARELRELGEAKQAAYRARRRGRTADGVVSGHAEGRLDVLTEDYLSVYLSPAMWDGRPRFEVTVD*
Ga0066677_100447254	3300005171	Soil	IPPNVIRDRARELRELGESKAAAYRATRVGQTADGVVSGRQGGRIEVLTQDYLSVYVRSEEWSGRPRFEVVID*
Ga0066677_101468071	3300005171	Soil	LRELGEAKATAYRASRVGQPADGVVTGRQQGRLELMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0066677_102121981	3300005171	Soil	PPRVLHQRALELRRVGEAKARRHHAGRVGQRADGVVSGHGAGKIEVLTQDYVSVYLPTEEWNGSPRFEVTVR*
Ga0066673_103125592	3300005175	Soil	GIIRERARELRERGEAKARAHRVRRLGQRADGVVCGRGEGKVEVLTEDYLSVYLPAHEWNGRPRFEVTVS*
Ga0070703_103222082	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	IRERAAELRALGEVKANAYREQRRGQTADGVVTGHRHGQIEAMTEDYLSVYLDSDRWDGRPRFEVTID*
Ga0070703_104376842	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	YRESRRGQAADGIVTGRVKAQVEVMTEDYLSVYLATDNWDGRPRFEVTVN*
Ga0070700_1009976022	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PDVIRARARELRELGEAKAAVHRAHRRGQTADGVVTGHRQGQIEVMTQDYLSVYLDTHLWDGRPRFEVTVN*
Ga0070694_1003864951	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ETKAKAYRARRRGHLADGVVTGHGQGQIETMTEDYLSVYLGTDRWDGRPRFEVTID*
Ga0070708_1015142082	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSPDLIKARARDLRELGESKAKAYRAGRVGQRADGVVSGRSGGRVDVLTEDYLSVYLPSDRWDGRPRLAITVD*
Ga0066682_102742502	3300005450	Soil	SERPGAAAARLGAPVPPRVLHQRARELRQLGEAKARRHHAARVGQTADGVVSGHEAGKVEVLTQDYVSLYLPTQEWNGSARFEVTVR*
Ga0066687_102827582	3300005454	Soil	IPPNVIRDRARELRELGESKAAAYRASRVGQTADGVVSGRQGGRIEVLTQDYLSVYVRSEEWSGRPRFEVVID*
Ga0070706_1012107742	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PDAAAARLSGQLPPEVIRDRARELREVGERKAIAYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0070707_1014525652	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGDAIPAPVVTRRARELRELGERKAAAHRRVRTGSTADGVVTGRRQGQVEVLTEDYLSVYLPVDSWDGRARLPVTV*
Ga0070699_1004773791	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RERARELRELGEAKAAAYRARRRGQPADGIVSGRQQGRLEVMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0070696_1004676491	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0066692_101269541	3300005555	Soil	AARARELRELGERKALAYREAQRGRRADGVVSGRAAGRVEVVTEDYLSVYLPVDRWDGRPRCEVTVD*
Ga0066704_101526352	3300005557	Soil	VVAARARELRELGERKALAYREAQRGRRADGVVSGRAAGRVEVVTEDYLSVYLPVDRWNGRPRCEVTVD*
Ga0066698_102279312	3300005558	Soil	AKAAAYREYRRGQTADGVVSGRQKGHIEVMTQDYLSVYLDTGRWDGRPRFEVIVN*
Ga0066703_108278831	3300005568	Soil	RPGAAAARLGVPVPPRVLHQRARQLRQLGEAKARRHHAARVGQTADGVVSGHGAGKVEVLTQDYVSVYLPTHEWNGSARFEVTVR*
Ga0066708_102581772	3300005576	Soil	IPPNVIRDRARELRELGESKAAAYRASRVGQTADGVVSGRQGGRVEVLTQDYLSVYVRSEEWSGRPRFEVVID*
Ga0066708_103765082	3300005576	Soil	LHQRARELRQLGEAKARRHHAARVGQTADGVVSGHGAGKVEVLTQDYVSLYLPTQEWNGSARFEVTVR*
Ga0066651_100025261	3300006031	Soil	SVRPDAPAAKLAGQVGPEVIRARARELRELGEANAAAYRARRLGQRADGVVTGRIKAQLEVMTEDYLSVYLDSELWDGRPRFEVTVN*
Ga0066651_105486961	3300006031	Soil	RVLHQRARELRDLGEAKARRHHAGRVGRRADGVVSGHGAGKVEVLTQDYVSVYLPTHEWNGSARFEVTVR*
Ga0066652_1001976621	3300006046	Soil	ELRQLGEAKARRHHAARVGQTADGVVSGHEAGKVEVLTQDYVSLYLPTQEWNGSARFEVTVR*
Ga0066653_100036461	3300006791	Soil	ARARELRELGEANAAAYRARRLGQRADGVVTGRIKAQLEVMTEDYLSVYLDSELWDGRPRFEVTVN*
Ga0066665_113599681	3300006796	Soil	ARLSGQLRPQVIRERARELRAVSEAKAGAYRACRRGQTADGVVSGRHQGRLEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0075433_111281671	3300006852	Populus Rhizosphere	AAARLGGQTPPAVIRERARELRELGEAKAAVYRARRRGQPADGIVSGRQQGRLEVMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0075433_117148712	3300006852	Populus Rhizosphere	RELRELGEAKARGYRARRKGQAADGVVAGRAGGRVDVLTEDYLSVYLPSDRWDGRPRFDLIVD*
Ga0075425_1018617452	3300006854	Populus Rhizosphere	AKAAVYRARRRGQPADGIVSGRQQGRLEVMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0075436_1004929992	3300006914	Populus Rhizosphere	GTIRDRARELRECGEAKARAHRSRRLGRRADGVVCGRREGKLEVLTEDYLSVYLPTHEWNGRPRFEVTVR*
Ga0075436_1010023552	3300006914	Populus Rhizosphere	AARLPDQLRPDVIRERARELRELGEAKARSYRMRRRGQSADGIVIGREQGRLEVMTEDYLSVYLDTESWDGRPRFEVTVN*
Ga0079219_117594402	3300006954	Agricultural Soil	ELRELGEAKERAYRVTRLGQRADAVVCGRREGKVEVLTEDYVSVFLPVAEWDGATRFEITIR*
Ga0099791_103938791	3300007255	Vadose Zone Soil	GDAKQRAYRAVRVGQTADGVLSGHGAGKVELLTADYLSVYLPIAEWNGRSRCEVTVR*
Ga0099793_106849822	3300007258	Vadose Zone Soil	REQLPSEVVRERARELRELGDAKQRAYRAVRVGQTADGVLSGHGAGKVELLTADYLSVYLPIAEWNGRSRCEVTVR*
Ga0099794_102055821	3300007265	Vadose Zone Soil	PPDVIRERARELREVGEAKAAAHRLRRRGQKADGVVTGRLKGQVEVMTEDYLSVYLDTDQWEGRPRFEVTVN*
Ga0099795_104603942	3300007788	Vadose Zone Soil	PDAPAARLSGQLPPEVIRARARELREVGEARAAAYRAQRRGQMADGVVTGRRKGQVEVMTQDYLSVYLDTQLWDGRPRFEVTVN*
Ga0066710_1005068031	3300009012	Grasslands Soil	AARLSDQLSPATVHGRARELRELGEAKQHAYRASRVGQTADGVVSGHGAGKVELLTQDYLSVYLPTAEWDGHPRFEVTVD
Ga0066710_1022489521	3300009012	Grasslands Soil	VFPYGERPGAAAARLGVPVPPRVLRQRARELRQLGEAKARRHHAARAGQTADGMVSGHGAGKVEVLTQDYVSVYLPTQEWNGSARFEVTIR
Ga0099827_119398261	3300009090	Vadose Zone Soil	LRELGAAKAVTHRARRLGERADGVVSGRGAGKLEVLTEDYLSVYLPVADWDGRPRFDITVS*
Ga0105259_11481022	3300009597	Soil	DAAAARQPGPLGPEVIRDRARELRELGELKAAVYRESRRGQTADGVVTGRVKAQVEVMTEDYLSVYLATDHWDGRPRFEVTVN*
Ga0105067_10630591	3300009812	Groundwater Sand	VPPAVIRERARELRELGEVKSAAYRLRRAGQQADGVISGRLQGRVEVMTQDYLSVYLDTDQWDGRPRFEVTVN*
Ga0127486_10409002	3300010128	Grasslands Soil	VGETKGAAYRTRRSGQTADGVVSGRQQGRLEVMTEDYLSVYLDTDLWNGRPRFEVTVN*
Ga0134082_104140132	3300010303	Grasslands Soil	DRARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTDEWNGRPRFEVTVR*
Ga0134088_100302211	3300010304	Grasslands Soil	LGEAKAAAHRQWRTGQAADGVVTGHRKGQVEVMTEDYLSVYLDTDLWDGRPRFGVTVN*
Ga0134088_101770012	3300010304	Grasslands Soil	LGERVLPGVIHERARELRECGAAKAQAHRTRRRGQRADGVVCGRGDGQVEVLTEDYLSVYLPTHEW
Ga0134088_101833551	3300010304	Grasslands Soil	DRARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR*
Ga0134067_100810252	3300010321	Grasslands Soil	PATVHGRARELRQLGEAKARAYRARRVGQTADGVVSGHGAGQIELLTQDYLSVYLPTTEWDGRPRCEVTVH*
Ga0134084_102033061	3300010322	Grasslands Soil	LSPATVHGRARELRQLGEAKARAYRVSRVGQTADGVVSGHGAGQIELLTQDYLSVYLPTAEWDGRPRCEVTVR*
Ga0134080_106994441	3300010333	Grasslands Soil	LREQLPAGMVRDRARELRELGEAKQRAYRASRLGQSADGVVSGHREGKIELLTQDYLSVYLPIPEWDGCPRCEVTVR*
Ga0134071_100514483	3300010336	Grasslands Soil	RARELRELGDRKALAYREAQRGRRADGVVSGRAAGRLEVVTEDYLSVYLPVDRWDGRPRCEVTVD*
Ga0134071_102853711	3300010336	Grasslands Soil	KAAAYRAGRIGQSADGVVSGRHQGRLEVMTEDYLSIYLDTDLWDGRPRFEVTVN*
Ga0134071_104829031	3300010336	Grasslands Soil	RELRELGEAKARAYRATRLGRRADGVVSGRGSGKVELLTEDYLSVYLPSNEWSGRARCEVTVS*
Ga0134066_100274212	3300010364	Grasslands Soil	LIRERARELRALGEAKAGAYRTRRKGQTADGVVTGRVQGQVEVMTEDYLNVYLDTHAWDGRPRFEVTVK*
Ga0134125_113509012	3300010371	Terrestrial Soil	RQLRECGDAKARAHRARRQGQRADGVVSGRGAGKVEVLTEDYLSVYLPTDQWNGRPRFEVTVR*
Ga0134125_124529992	3300010371	Terrestrial Soil	FSVRPDAPAARLSGQLRPEVIRARSRELRELGEAKAAAYRARRRGQQGDGVVSGRQGGRVEVVTEDYLSVFLPSDDWNGETRFAVEID*
Ga0134126_110018731	3300010396	Terrestrial Soil	RLSGQLPPEVIRDRARELREVGERKAIAYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0137326_10287342	3300011417	Soil	FSVRPDAAAARLSGQVRPDIIRERARELRELGESKAGAYRAKRVGQLADGVVSGRVQGRLEVMTQDYLSVYLDSGEWDGRPRFEVMVN*
Ga0137439_11410212	3300011424	Soil	RELRELGEAKAAVYRAGRMGQRGDGVVSGRQGGRVEVLTEDYLSVYVRSEDWDGDPRFEVVID*
Ga0137389_107500192	3300012096	Vadose Zone Soil	ELGEAKGAAYRASRAGQLADGVVSGRFKGQIEVMTQDYLSVYLDTDQWDGRPRFEVTVN*
Ga0137321_10292402	3300012175	Soil	SGQVRPDIIRERARELRELGESKAGAYRAKRVGQLADGVVSGRVQGRLEVMTQDYLSVYLDSGEWDGRPRFEVMVN*
Ga0137365_106593551	3300012201	Vadose Zone Soil	SVRPDAAAVRLSDQLSSATVHRRARELRELGDAKQRAYRARRVGQTADGVMSGHGAVQIELVTQDYLSVYLPTAQWDGRPRCEVTVR*
Ga0137363_108883792	3300012202	Vadose Zone Soil	SGQLSPEVIRARARELRELGEAKGVAYRASRAGQLADGVVSGRLKGQIEVMTQDYLSVYLDTHLWDGRPRFEVTVN*
Ga0137363_109821211	3300012202	Vadose Zone Soil	TAYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0137399_100157715	3300012203	Vadose Zone Soil	IKARARELRELGESKAKAYRAGRVGQGADGVVSGRIGGRVDVLTEDYLSVYLPSDRWDGRPRLAITVD*
Ga0137399_106495812	3300012203	Vadose Zone Soil	IRARARELRELGEAKGAAYRASRAGQLADGVVSGRLKGQVEVMTEDYLSVYLDTHLWDGRPRFEVTVN*
Ga0137381_117442621	3300012207	Vadose Zone Soil	EAKAAAYRARRRGQTADGVVSGRHQGRLEVMTEDYLSIYLDTDLWDGRPRFEVTVN*
Ga0137376_103123791	3300012208	Vadose Zone Soil	PDAAAAKLNGQVPAERIRTRARDLRELGDAKAAAYRASRIGQRADGVVSGHGAGKVEAVTQDYLTVYLDTERWDGRPRFEVTIS*
Ga0137377_112321831	3300012211	Vadose Zone Soil	IRQRARELREVGEAKAAAHRLRRRGQTADGVVTGRLKGQVEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0137370_101244442	3300012285	Vadose Zone Soil	DAPAARLSDQLSPATVHGRARELRQLGEAKARAYRARRVGQTADGVVSGHGAGQIELLTQDYLSVYLPTAEWDGRPRCEVTVR*
Ga0137387_111211502	3300012349	Vadose Zone Soil	FSVRPDAAAVRLSDQLSSATVHRRARELRELGDAKQRAYRARRVGQTADGVMSGHGAGQIELVTQDYLSVYLPTAQWDGRPRCEVTVR*
Ga0137386_107816782	3300012351	Vadose Zone Soil	ARELRELGEAKARAYRASRVGQTADGVMSGHGAGQIELVTQDYLSVYLPTARWDGRPRCEVTVR*
Ga0137361_114080621	3300012362	Vadose Zone Soil	ARLPGQLPPEVIRERAREQRELGEAKAAAHRQCRTGQAADGVVTGHRKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0137361_115461362	3300012362	Vadose Zone Soil	ARLPGQLPPEVIRERAREQRELGEAKAAAHRQCRTGQAADGVVTGHRKGQIEVMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0134044_10920031	3300012395	Grasslands Soil	DVIRQRARELREVGEAKAAVHRLRRRGQTADGVVTGRLKGQVEVMTEDYLSVYLDTDQWDGRPRFEVTVN*
Ga0134045_11420372	3300012409	Grasslands Soil	RERARELRELGENKAAAYRAGRIGQSADGVVSGRHQGRLEVMTEDYLSIYLDTDLWDGRPRFEVTVN*
Ga0137398_102953861	3300012683	Vadose Zone Soil	KATAYRTGRVGQAADGVVTSHGKGRIEVMTEDYLSVYLDTDLWDGRPRFEVTVN*
Ga0137397_100732854	3300012685	Vadose Zone Soil	AAKLVGQVSPDLIKARARELRELGESKAKAYRAGRMGQQADGVVSGRIGGRVDVLTEDYLSVYLPSDRWDGRPRLAITVD*
Ga0137395_100243794	3300012917	Vadose Zone Soil	RARELREAGEARAAAYREQRRGHTADGVVTGRRQGQVEAMTQAYLSVYLDTHLWDGRPRFEVTVN*
Ga0137394_101780991	3300012922	Vadose Zone Soil	DAPAAKLAGQVSPDLIKARARELRELGESKAKAYRAGRMGQQADGVVSGRIGGRVDVLTEDYLSVYLPSDRWDGRPRLAITVD*
Ga0137394_111290792	3300012922	Vadose Zone Soil	VIRDRARELREVGAAKATAYRTGRVGQTADGVVTSHGKGRIEVMTEDYLSVYLDADLWDGRPRFEVTVN*
Ga0137419_101281763	3300012925	Vadose Zone Soil	PGAASGRLGERLPPGAIRARARELRERGEAKARAYRARRCGQRADGVMCGRGDGKVEVLTEDYLSIYLPTHEWNGRPRFEVTVR*
Ga0137404_116151061	3300012929	Vadose Zone Soil	ARELRELGERKAAAHWRRRSGSTADGVVTGRAQGQVEVLTEDYLSVYLPVDSWDGRARLPVTV*
Ga0137407_107614062	3300012930	Vadose Zone Soil	RERARELRELGEAKGRAYRVRRAGQWADGVVSGHLAGRVDVLTEDYLSVYLPSDRWDGRPRLAITVD*
Ga0134076_100019971	3300012976	Grasslands Soil	RERARELRELGESKAAAYRASRAGQAADGVVSGRQGGRVEVLTQDYLSVYVRSEAWSGRPRFEVVID*
Ga0134076_100020616	3300012976	Grasslands Soil	RDRARELRELGDAKQRAYRASRLGQSADGVVSGHGVGKVELLTQDYLSVYLPIPQWNGCPRCEVTVR*
Ga0157378_102358164	3300013297	Miscanthus Rhizosphere	LGEVKANAYREQRRGQTADGVVTGHRNGQIEAMTEDYLSVYLDSDRWDGRPRFEVAID*
Ga0134081_100075664	3300014150	Grasslands Soil	ATVHGRARELRQLGEAKARAYRASRVGQTADGVVSGHGAGQIELLTQDYLSVYLPTASWDGRPRCEVTVR*
Ga0134075_103493142	3300014154	Grasslands Soil	AIRERARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR*
Ga0134089_103944631	3300015358	Grasslands Soil	LRALGEAKAGAYRTRRKGQTADGVVTGRLQGQVEVMTQDYLSVYLDTHAWDGRPRFEVTVN*
Ga0134085_100335044	3300015359	Grasslands Soil	AKLSGQLRPEVIRARARELRELGEAKAAAYREYRRGQTADGVVTGRHNGHIEVMTQDYLSVYLDSDRWDGRPRFEVIVN*
Ga0134085_100678242	3300015359	Grasslands Soil	AAGRLGERLPPGAIRDRARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTHEWDGRPRFEVTVR*
Ga0132257_1032141221	3300015373	Arabidopsis Rhizosphere	AFSIFVRELGEAKERAYRLTRLGRRADGVVCGRGEGKLEVLTEDYLSVYLPVDEWDGSPRFDITIR*
Ga0132257_1034007892	3300015373	Arabidopsis Rhizosphere	VAARLPDPVRPEVIRERAAELRALGEAKANAYRELRRGQTADGVVTGHRHGQIEAMTEDYLSVYLDSDRWDGRPRFEVTID*
Ga0134112_101382622	3300017656	Grasslands Soil	SGQLPPAVIRERARELRELGENKAAAYRAGRIGQSADGVVSGRHQGRLEVMTEDYLSIYLDTDLWDGRPRFEVTVN
Ga0184627_105336481	3300018079	Groundwater Sediment	NLRARELRELGEAKARAHRAGRVGQRADGVVSGRQGGKVDVLTEDYLSVYLPSDRWDGRPRFDLIVD
Ga0066655_105923371	3300018431	Grasslands Soil	AAGRLGERLPPGAIRDRARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR
Ga0193722_10823872	3300019877	Soil	VRPDAPAARLSGQLSPEVIRARARELRELGEAKGAAYRASRAGRLADGVVTGRLKGQIEVMTQDYLSVYLDTHLWDGRPRFEVTVN
Ga0215015_102623763	3300021046	Soil	VQERARELRELGDTKARAYRARRAGGRADGVVTGRGVGKVEVLTEDYLSIYLPTAEWHGDARFEVTGR
Ga0222622_106980732	3300022756	Groundwater Sediment	DVIRQRARELREVGAAKAAAHRLRRRGQTADGVVTGRLKGQVEVMTEDYLSVYLDTDLWDGRPRFEVTVN
Ga0209002_106648851	3300025289	Soil	PAAKLPDRLPPVVINARARELRALGAAKAQEYRARRVGQRADGVVSGRLGGRVDVLTEDYLSVYLPSDRWDGRPRFDVTVD
Ga0209341_110485771	3300025325	Soil	RARELRDLGEAKAAAYRSSRVGQVADGVVSGRQQGRLEVMTQDYLSVYLDTGQWDGRPRFEVTVN
Ga0209235_10072011	3300026296	Grasslands Soil	LPPEVIRERAREQRELGEAKAAAHRQCRTGQAADGVVTGHRKGQVEVMTEDYLSVYLDTDLWDGRPRFEVTVN
Ga0209235_10598093	3300026296	Grasslands Soil	IREIGEAKAAAHRARRRGQTADGVVSGRQQGRLDVMTEDYLSVYLDTEQWDGRPRFEVTV
Ga0209236_12542921	3300026298	Grasslands Soil	EGVPSGTIRERARELRERGETKARTHRAGRTGQRADGVVCGRGEGRVEVLTEDYVSVYLPTHEWNGRPRFEVTVR
Ga0209238_10244924	3300026301	Grasslands Soil	VVRERARELRELGDAKQRAYRAVRVGQTADGVLSGHGAGKVELLTADYLSVYLPIAEWNGRSRCEVTVR
Ga0209238_10290474	3300026301	Grasslands Soil	GRLGEAKARRHHASRLGQRADGVVSGHGAGKVEVLTQDYVSVYLPTEEWNGSARFEVTVR
Ga0209468_10048671	3300026306	Soil	AYRARRLGQRADGVVTGRIKAQLEVMTEDYLSVYLDSELWDGRPRFEVTVN
Ga0209265_10231463	3300026308	Soil	LGERLPPGAIHDRARELRECGEAKARSHRARRHGQRADGVVCGRGTGRVEVLTEDYLSVYLPTHEWNGRPRFEVTVR
Ga0209265_10551402	3300026308	Soil	PRMLHQRALELRRLGEAKGRRYRAGRVDQRADGVVSGHGAGKIEVLTQDYVSVYLPTEEWNGSARFEVTVR
Ga0209761_11767001	3300026313	Grasslands Soil	ARELRALSDAKAAAYRQYRIGQTADGVVTGRGKGQIEVMTEDYLSVYLDTHLWDGRPRFEVTVN
Ga0209154_10290471	3300026317	Soil	SERPGAAAGRLGERVPPSAIRDRARELRDRGAAKARLHRARRHGQRADGVMCGRGEGKIEVLTEDYLSLYLPTHEWNGRPRFEVTVR
Ga0209154_10338911	3300026317	Soil	QRARELRDLGEAKARRHHAGRVGQRADGVVSGHGAGTVEVLTQDYVSVYLPTHEWNGSARFEVTVR
Ga0209154_11563573	3300026317	Soil	GQLRPELIRDRARELRELGETKATAYRASRVGQAADGVVTGRQQGRLELMTEDYLSVYLDTDQWDGRPRFEVTVN
Ga0209154_12889921	3300026317	Soil	AAVRLSDQLSSATVHRRARELRELGEAKQRAYRASRVGQTADGVMSGHGAGQIELVTQDYLSVYLPTAQWDGRPRCEVTVR
Ga0209152_104856512	3300026325	Soil	LGETKATAYRASRVGQAADGVVTGRQQGRLELMTEDYLSVYLDTDQWDGRPRFEVTVN
Ga0209802_12063962	3300026328	Soil	PGAAAGRLGERVPPSAIRDRARELRDRGAAKARLHRARRHGQRADGVMCGRGEGKIEVLTEDYLSLYLPTHEWNGRPRFEVTVR
Ga0209473_11182682	3300026330	Soil	ELRELGDAKQRAYRASRLGQSADGVVSGHGVGKVELLTQDYLSVYLPIPQWNGCPRCEVTVR
Ga0209377_10468092	3300026334	Soil	VVRERARELRELGEAKARAYRATRLGQRADGVVSGRGSGKVELLTEDYVSVYLPSNEWSGRARCEVTVR
Ga0209808_11694321	3300026523	Soil	GDAKQRAYRASRLGQSADGVVSGHGEGKVELLTQDYLSVYLPIPQWNGCPRCEVTVR
Ga0209690_12064032	3300026524	Soil	VHRRARELRELGEAKQRAYRARRVGQTADGVMSGHGAGQIELLTQDYLSVYLPTARWDGRPRCEVTVR
Ga0209807_10956671	3300026530	Soil	PPGAIRDRARELRECGEAKARSHRARRHGQRADGVVCGRGAGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR
Ga0209056_105328062	3300026538	Soil	AGQVPPDVIRERARQLRELGESKATAYRATRAGQAADGVVSGRQGGRVEVLTQDYLSVYVRSEEWSGRPRFEVVID
Ga0209376_10520071	3300026540	Soil	DRARELRELGDAKAHNHRDQRRGQRADGVVSGRGAGRLEVLTEDYLSVYLPVADWDGRPRFDITVS
Ga0209805_13305502	3300026542	Soil	ELRELGETKATAYRASRVGQAADGVVTGRQQGRLELMTEDYLSVYLDTDQWDGRPRFEVTVN
Ga0209156_102530202	3300026547	Soil	KATAYRAQRRGQTADGIVSGRQRGQLEVMTEDYLSVYLDTLTWDGRPRFEVIVN
Ga0209161_101643371	3300026548	Soil	VRERARELRELGEAKARAYRATRLGRRADGVVSGRGSGKVELLTEDYLSVYLPSNEWSGRARCEVTVS
Ga0209648_100112581	3300026551	Grasslands Soil	PLVQERARALRELGDAKARAYRARRAGAPADGVVTGRGNGTVEVLTEDYLSVYLPTAQWNGDARFEVTVR
Ga0209861_10360361	3300027332	Groundwater Sand	VINARARELRELGEAKARAYRAARVGQRADGVVSGRLGGRVDVLTEDYLSIYLPSDRWDGRPRLDLLVD
Ga0209213_11032792	3300027383	Forest Soil	LPPGAIRARARELRERGEAKARAYRARRCGQRADGVMCGRGDGKVEVLTEDFLSIYLPTHEWNGRPRFEVTVR
Ga0208995_10258011	3300027388	Forest Soil	PAIRERARELRACGEAKARGHRASRLGHRADGVTCGRGEGKVEVLTEDYLSVYLPTHEWNGRPRFEVTVR
Ga0208454_11247882	3300027573	Soil	GELKAAVYRESRRGQTADGVVTGRVKAQVEVMTEDYLSVYLATDHWDGRPRFEVTVN
Ga0209076_11478831	3300027643	Vadose Zone Soil	QLPPEVIRERARELRELGEAKAAAHRRCRTGQAADGVVTGHRKGQIEVMTEDYLSVYLETDLWDGRPRFEVTVH
Ga0209590_100721724	3300027882	Vadose Zone Soil	RLSGQLSSEVIRARARQLRELGEAKGAAYRASRAGQLADGVVSGRLKGRIEVMTQDYLSIYLDAHLWDGRPRFEVTVN
Ga0209382_118397581	3300027909	Populus Rhizosphere	RALGAAKGEAYRATRRGRRADGVACGHAGGRVDVLTEDYLTVYLESDRWDGTPRVDVLID
Ga0307282_103367002	3300028784	Soil	VAKATAYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTNLWDGRPRFEVTVN
Ga0307302_102997891	3300028814	Soil	LPPVVIRDRARELREVGVAKATAYRAGRVGQTADGVVTGHGKGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN
Ga0307278_101807402	3300028878	Soil	EAKATVYRAGRIGQTADGVVTGHGNGQIEVMTEDYLSVYLDTDLWDGRPRFEVTVN
Ga0307468_1009993632	3300031740	Hardwood Forest Soil	AAGRLGERVPPGLIRERAHELRERGEAKARAHRVRRQGQRADGVVCGRREGKVEVLTEDYLSVYLPTHDWNGRPRFEVTVP
Ga0364942_0034597_1_195	3300034165	Sediment	ARQLRELGEAKAQAYRARRRGQRADGVVSGRLGGRVDVLTEDYLSVYLPSDRWDGRPRFDISVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045660

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences