Metagenome / Metatranscriptome Family F045655

Basic Information
Family ID	F045655
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	44 residues
Representative Sequence	ELHKSGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Number of Associated Samples	129
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.66 %
% of genes near scaffold ends (potentially truncated)	98.68 %
% of genes from short scaffolds (< 2000 bps)	95.39 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (92.763 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.763 % of family members)
Environment Ontology (ENVO)	Unclassified (35.526 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.789 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.66% β-sheet: 23.29% Coil/Unstructured: 52.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF07746	LigA	76.32
PF01557	FAA_hydrolase	5.26
PF13378	MR_MLE_C	1.97
PF01979	Amidohydro_1	1.32
PF04519	Bactofilin	1.32
PF02518	HATPase_c	1.32
PF07883	Cupin_2	1.32
PF00561	Abhydrolase_1	0.66
PF08530	PepX_C	0.66
PF07690	MFS_1	0.66
PF02738	MoCoBD_1	0.66
PF05036	SPOR	0.66
PF01547	SBP_bac_1	0.66
PF14535	AMP-binding_C_2	0.66
PF03243	MerB	0.66
PF00180	Iso_dh	0.66
PF11249	DUF3047	0.66
PF09335	SNARE_assoc	0.66
PF13594	Obsolete Pfam Family	0.66
PF02900	LigB	0.66
PF04879	Molybdop_Fe4S4	0.66
PF00196	GerE	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.32
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.66
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.66
COG2936	Predicted acyl esterase	General function prediction only [R]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.76 %
Unclassified	root	N/A	7.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.76 %
Unclassified	root	N/A	7.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.76 %
Unclassified	root	N/A	7.24 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	61.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.87 %
Unclassified	root	N/A	7.24 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	61.84 %
Unclassified	root	N/A	7.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	61.84 %
Unclassified	root	N/A	7.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	30.26 %
Unclassified	root	N/A	7.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.66 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	30.26 %
Unclassified	root	N/A	7.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.66 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	30.26 %
Unclassified	root	N/A	7.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
unclassified Ramlibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter	0.66 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.66 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	30.26 %
Unclassified	root	N/A	7.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Ramlibacter sp. WS9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. WS9	0.66 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11082872	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300002557\|JGI25381J37097_1059415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	615	Open in IMG/M
3300004062\|Ga0055500_10014708	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300004267\|Ga0066396_10068880	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300004268\|Ga0066398_10176631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300004629\|Ga0008092_11023404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300005093\|Ga0062594_101837685	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005093\|Ga0062594_103015056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	526	Open in IMG/M
3300005166\|Ga0066674_10072189	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300005171\|Ga0066677_10715511	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005178\|Ga0066688_10279567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300005295\|Ga0065707_10701303	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	639	Open in IMG/M
3300005332\|Ga0066388_100094464	All Organisms → cellular organisms → Bacteria → Proteobacteria	3429	Open in IMG/M
3300005332\|Ga0066388_102517343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300005332\|Ga0066388_105281846	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300005341\|Ga0070691_10148806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300005440\|Ga0070705_101037000	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005441\|Ga0070700_101455208	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005444\|Ga0070694_100471236	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005444\|Ga0070694_101926895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300005445\|Ga0070708_100340479	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300005468\|Ga0070707_100753019	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005471\|Ga0070698_101602175	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005543\|Ga0070672_101535635	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005545\|Ga0070695_101370683	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300005552\|Ga0066701_10836911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	547	Open in IMG/M
3300005563\|Ga0068855_102175239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005586\|Ga0066691_10355421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300005586\|Ga0066691_10756580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300005713\|Ga0066905_100971466	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300005713\|Ga0066905_101694568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	581	Open in IMG/M
3300005713\|Ga0066905_101714084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	578	Open in IMG/M
3300005844\|Ga0068862_101177580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300006046\|Ga0066652_100034669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3657	Open in IMG/M
3300006049\|Ga0075417_10208644	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300006791\|Ga0066653_10331792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	768	Open in IMG/M
3300006796\|Ga0066665_11526152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	522	Open in IMG/M
3300006845\|Ga0075421_100772678	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300006845\|Ga0075421_100851492	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300006845\|Ga0075421_102422277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	549	Open in IMG/M
3300006853\|Ga0075420_100770030	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006876\|Ga0079217_11113261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300006903\|Ga0075426_10262646	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300006914\|Ga0075436_100034483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3490	Open in IMG/M
3300007076\|Ga0075435_100673844	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300007265\|Ga0099794_10033545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2414	Open in IMG/M
3300009078\|Ga0105106_11085052	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	568	Open in IMG/M
3300009088\|Ga0099830_11401463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300009089\|Ga0099828_11518061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300009089\|Ga0099828_11825272	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	534	Open in IMG/M
3300009098\|Ga0105245_10801254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	980	Open in IMG/M
3300009177\|Ga0105248_11570161	Not Available	745	Open in IMG/M
3300009553\|Ga0105249_10711144	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1065	Open in IMG/M
3300009553\|Ga0105249_12042969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	646	Open in IMG/M
3300009792\|Ga0126374_11530257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300009810\|Ga0105088_1096181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	544	Open in IMG/M
3300010047\|Ga0126382_11327956	Not Available	652	Open in IMG/M
3300010047\|Ga0126382_11732223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	585	Open in IMG/M
3300010303\|Ga0134082_10082355	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300010304\|Ga0134088_10361616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300010321\|Ga0134067_10290693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300010325\|Ga0134064_10094146	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300010333\|Ga0134080_10702304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300010359\|Ga0126376_10595041	Not Available	1045	Open in IMG/M
3300010359\|Ga0126376_11277609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	753	Open in IMG/M
3300010359\|Ga0126376_11483105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300010359\|Ga0126376_12157555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	601	Open in IMG/M
3300010360\|Ga0126372_10577844	Not Available	1073	Open in IMG/M
3300010360\|Ga0126372_13030221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300010362\|Ga0126377_11314902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	795	Open in IMG/M
3300010362\|Ga0126377_11955356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300010371\|Ga0134125_11385561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300010376\|Ga0126381_101669823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	920	Open in IMG/M
3300010397\|Ga0134124_11302465	Not Available	750	Open in IMG/M
3300010401\|Ga0134121_10214125	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300010403\|Ga0134123_13213923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	526	Open in IMG/M
3300011119\|Ga0105246_10864468	Not Available	808	Open in IMG/M
3300011270\|Ga0137391_10890995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300011271\|Ga0137393_10857736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300011434\|Ga0137464_1228713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300012202\|Ga0137363_10694632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300012203\|Ga0137399_11652543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	529	Open in IMG/M
3300012205\|Ga0137362_11190714	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	646	Open in IMG/M
3300012351\|Ga0137386_10237695	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1309	Open in IMG/M
3300012357\|Ga0137384_10194681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1696	Open in IMG/M
3300012362\|Ga0137361_10385898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1286	Open in IMG/M
3300012685\|Ga0137397_11212111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300012918\|Ga0137396_10134436	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1792	Open in IMG/M
3300012918\|Ga0137396_11092386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	571	Open in IMG/M
3300012922\|Ga0137394_10245462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1531	Open in IMG/M
3300012922\|Ga0137394_10403246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1166	Open in IMG/M
3300012925\|Ga0137419_10367677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1117	Open in IMG/M
3300012929\|Ga0137404_10538545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1045	Open in IMG/M
3300012930\|Ga0137407_11250209	Not Available	705	Open in IMG/M
3300012930\|Ga0137407_12113070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	538	Open in IMG/M
3300012944\|Ga0137410_10902445	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300014310\|Ga0075331_1090484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. WS9	708	Open in IMG/M
3300014326\|Ga0157380_10980089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	877	Open in IMG/M
3300014885\|Ga0180063_1197045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300015251\|Ga0180070_1054429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	552	Open in IMG/M
3300015254\|Ga0180089_1014077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1416	Open in IMG/M
3300015262\|Ga0182007_10155805	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300015264\|Ga0137403_10017397	All Organisms → cellular organisms → Bacteria	7757	Open in IMG/M
3300015371\|Ga0132258_12654453	Not Available	1250	Open in IMG/M
3300015372\|Ga0132256_102335104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300017656\|Ga0134112_10039567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1684	Open in IMG/M
3300017657\|Ga0134074_1341478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300018031\|Ga0184634_10430057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300018078\|Ga0184612_10490005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	603	Open in IMG/M
3300018482\|Ga0066669_12035964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	539	Open in IMG/M
3300019233\|Ga0184645_1084713	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300019279\|Ga0184642_1605549	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300019487\|Ga0187893_10218330	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1442	Open in IMG/M
3300019879\|Ga0193723_1005526	All Organisms → cellular organisms → Bacteria	4278	Open in IMG/M
3300020004\|Ga0193755_1054986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1297	Open in IMG/M
3300020006\|Ga0193735_1164028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300020062\|Ga0193724_1072972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300021344\|Ga0193719_10205559	Not Available	840	Open in IMG/M
3300022534\|Ga0224452_1071916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300025910\|Ga0207684_11524506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300025940\|Ga0207691_11408702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	572	Open in IMG/M
3300025949\|Ga0207667_11779075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300025961\|Ga0207712_11146580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	693	Open in IMG/M
3300026295\|Ga0209234_1138994	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300026297\|Ga0209237_1223689	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	585	Open in IMG/M
3300026325\|Ga0209152_10037036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1684	Open in IMG/M
3300026332\|Ga0209803_1250424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	612	Open in IMG/M
3300026550\|Ga0209474_10557129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	583	Open in IMG/M
3300027332\|Ga0209861_1054254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300027654\|Ga0209799_1043267	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300027671\|Ga0209588_1097553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	946	Open in IMG/M
3300027846\|Ga0209180_10295522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	929	Open in IMG/M
3300027875\|Ga0209283_10171126	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1442	Open in IMG/M
3300027882\|Ga0209590_10820373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	590	Open in IMG/M
3300028381\|Ga0268264_11346792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	724	Open in IMG/M
3300028792\|Ga0307504_10147157	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300028828\|Ga0307312_10511283	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300030336\|Ga0247826_10992875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300031198\|Ga0307500_10309883	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	504	Open in IMG/M
3300031720\|Ga0307469_10110290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1960	Open in IMG/M
3300031720\|Ga0307469_12379780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300031781\|Ga0318547_10075676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1875	Open in IMG/M
3300031879\|Ga0306919_10345352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1136	Open in IMG/M
3300032075\|Ga0310890_10397268	Not Available	1022	Open in IMG/M
3300032180\|Ga0307471_104119923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	513	Open in IMG/M
3300032180\|Ga0307471_104166154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	511	Open in IMG/M
3300032205\|Ga0307472_100673932	Not Available	925	Open in IMG/M
3300032205\|Ga0307472_102120935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	565	Open in IMG/M
3300032770\|Ga0335085_11703340	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300033513\|Ga0316628_102885776	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300033550\|Ga0247829_10138745	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300034178\|Ga0364934_0005040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.21%
Host-Associated	Host-Associated	15.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.97%
Plants	Host-Associated → Plants	15.79%
Aquatic	Environmental → Aquatic	7.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Sediment	Environmental → Aquatic → Sediment	4.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.29%
Freshwater	Environmental → Aquatic → Freshwater	1.97%
Marine	Environmental → Aquatic → Marine	0.66%
Cave	Environmental → Terrestrial → Cave	0.66%
Floodplain	Environmental → Terrestrial → Floodplain	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.21%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.97%
Sand	Environmental → Terrestrial → Soil → Sand	1.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.66%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.95%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.66%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.66%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.66%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015251	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_110828721	3300000363	Soil	LHKTGEHEFLNWMVLIGAVSPARAQVRYFGELRRINLAAVEWSLP*
JGI25381J37097_10594153	3300002557	Grasslands Soil	ELHKTGSHEFLNWMVLIGAVTPARADVRYFGELPRINLAAVEWRMR*
Ga0055500_100147083	3300004062	Natural And Restored Wetlands	GVDELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0066396_100688803	3300004267	Tropical Forest Soil	TGEHEFLNWMVLLGAISPARAQVRYFGELRRINLAAVEWSLA*
Ga0066398_101766312	3300004268	Tropical Forest Soil	LDLTADELHKTGSHEFLNWMVLLGALTPARAEVRYFGELPRINLAAVEWKIG*
Ga0008092_110234041	3300004629	Tropical Rainforest Soil	TADELHKTGSHEFLNWMVLLGALTPARAEVRYFGELPRINLAAVEWKLG*
Ga0062594_1018376853	3300005093	Soil	ELHKTGEHEFLNWMVLIGAVSPARAQVRYFGELRRINLAAVEWSLP*
Ga0062594_1030150562	3300005093	Soil	ELTADELHKSGSHEFLNWMVLLGAVTPARADVRFFGELPRINMAAVEWRL*
Ga0066674_100721894	3300005166	Soil	EHEFLNWMVLIGAVTPARADVRYFGELGRINLAAVEWRVG*
Ga0066677_107155111	3300005171	Soil	HEFLNWMVLLGAVTPARADVRYFGELRRINMAAVEWSLP*
Ga0066688_102795673	3300005178	Soil	DKAGEHEFLNWMTLIGAVTPARADVRYFGELGRINLAAVEWRVA*
Ga0065707_107013032	3300005295	Switchgrass Rhizosphere	LLDLTADELHKTGSHEFLNWMVLLGAITPARAEVRYFGELPRINLAAVEWRL*
Ga0066388_1000944646	3300005332	Tropical Forest Soil	DELHKTGSHEFLNWMVLLGAVSPARAEVRYFGELPRINLAAVEWRLP*
Ga0066388_1025173431	3300005332	Tropical Forest Soil	DELHKTGSHEFLNWMVLLGAVSPAPAQVRYFGELPRINMAAVEWSLA*
Ga0066388_1052818463	3300005332	Tropical Forest Soil	EHEFLNWMVVLGAISPAPGDLRYFGELGRINLAAFEWRLA*
Ga0070691_101488063	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	ELHKTGEHEFLNWMVLLGAVAPARAQVRYFGELRRINLAAVEWSLP*
Ga0070705_1010370001	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EHEFLNWMVLIGAVTPARADVRYFGELRRINMAAVEWRLA*
Ga0070700_1014552083	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TGSHEFLNWMVLLGAVTPAPAEVRYFGELPRINLAAVEWSLS*
Ga0070694_1004712363	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LHKTGEHEFLNWMVLLGAVTPARAQVRYFGELRRINLAAVEWSLP*
Ga0070694_1019268953	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TADELHKAGEHELLNWIVVAGAVAPARAELRYFGELPRINLTAVEWRLP*
Ga0070708_1003404791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HKTGEHEFLNWMVLIGAITPARAQMRYFGELRRINLAAAEWSLA*
Ga0070707_1007530193	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TVGELHKTGEHEFLNWMVLIGAITPARAQVRYFGELRRINLAAVEWSLP*
Ga0070698_1016021753	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TADELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0070672_1015356351	3300005543	Miscanthus Rhizosphere	DELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0070695_1013706831	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ELDKSGEHEFLNWMVLLGAVSPARADVRYFGELPRINMAAVEWRLA*
Ga0066701_108369113	3300005552	Soil	DELHKTGSHEFLNWMVLIGAVTPARADVRYFGELLRINLAAVEWRVR*
Ga0068855_1021752391	3300005563	Corn Rhizosphere	KTGEHEFLNWMVLLGAVAPARAQVRYFGELRRINLAAVEWSLP*
Ga0066691_103554211	3300005586	Soil	LSADELHKSGGHEFLNWMVLMGAVTPARAAVRYFGELRRINLAAVEWRLA*
Ga0066691_107565803	3300005586	Soil	SGGHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRLG*
Ga0066905_1009714663	3300005713	Tropical Forest Soil	GEHEFLNWMVLIGAVSPARADVRYFGELGRIDLAAVEWRVG*
Ga0066905_1016945683	3300005713	Tropical Forest Soil	DELHKTGSHEFLNWMVLLGAVTPARAQVRYFGELPRINMAAVEWTLS*
Ga0066905_1017140841	3300005713	Tropical Forest Soil	ELHKTGEHEFLNWMVVLGAITPARGDLRYFAELGRINLAAFEWSLA*
Ga0068862_1011775803	3300005844	Switchgrass Rhizosphere	DELHKSGSHEFLNWMVLLGAITPARADVRYFGELRRINLAAVEWRLS*
Ga0066652_1000346696	3300006046	Soil	TGSHELLNWMVLLGAVAPARARVRFFGEMGRIDLAALEWLLADPQGGHE*
Ga0075417_102086441	3300006049	Populus Rhizosphere	DELHKSGSHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLG*
Ga0066653_103317924	3300006791	Soil	GELHKAGEHEFLNWMVLIGAVTPARADVRYFGELGRINLAAVEWRVG*
Ga0066665_115261523	3300006796	Soil	DELHKTGSHEFLNWMVLLGAITPARAAVRYFGELPRINLAAVEWRL*
Ga0075421_1007726783	3300006845	Populus Rhizosphere	LHKTGSHEFLNWMVLLGAVTPAPADVRYFGELPRINLAAVEWRL*
Ga0075421_1008514925	3300006845	Populus Rhizosphere	LTADELHKTGSHEFLNWMVLLGAVTPAPADVRYFGELPRINLAAVEWRL*
Ga0075421_1024222771	3300006845	Populus Rhizosphere	QALTMDELHKTGEHEFLNWMVLLGAVTPAPAEVRYFCELGRINLAAVEWRVA*
Ga0075420_1007700303	3300006853	Populus Rhizosphere	FLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0079217_111132613	3300006876	Agricultural Soil	GEHEFLNWMVLLGAVTPARADVRYFGELPRINMAAVEWRL*
Ga0075426_102626461	3300006903	Populus Rhizosphere	ELHKTGEHEFLNWMVLIGAITPARAQVRYFGELRRINLAAVEWSLA*
Ga0075436_1000344831	3300006914	Populus Rhizosphere	NWMVLMGAVTPARADVRYFGELPRINMAAVEWRLA*
Ga0075435_1006738443	3300007076	Populus Rhizosphere	HEFLNWMVLLGAITPARAVVRYFGELPRINLAAVEWTLA*
Ga0099794_100335451	3300007265	Vadose Zone Soil	DELHKSGGHEFLNWMVLLGAVTPARADVRYFGELRRINLAAVEWRLA*
Ga0105106_110850521	3300009078	Freshwater Sediment	LHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0099830_114014633	3300009088	Vadose Zone Soil	LDLTADELHKTGSHEFLNWMVLLGAITPSRADVRYFGELPRINLAAVEWRL*
Ga0099828_115180613	3300009089	Vadose Zone Soil	SDELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0099828_118252723	3300009089	Vadose Zone Soil	WMVLIGAVSPARADVRYFGELRRINMAAVEWRLA*
Ga0105245_108012541	3300009098	Miscanthus Rhizosphere	MDELHKAGEHEFLNWMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA*
Ga0105248_115701613	3300009177	Switchgrass Rhizosphere	LTADELHKSGSHEFLNWMVLLGAVTPARAEVRYFGELPRINMAAVEWSLS*
Ga0105249_107111441	3300009553	Switchgrass Rhizosphere	LNWMVLIGAVSPARAQVRYFGELRRINLAAVEWSLP*
Ga0105249_120429691	3300009553	Switchgrass Rhizosphere	QALTADELHKAGEHEFLNWMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA*
Ga0126374_115302573	3300009792	Tropical Forest Soil	FLNWMVLLGALTPARAEVRYFGELPRINLAAVEWKLG*
Ga0105088_10961812	3300009810	Groundwater Sand	MQDLHESGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRAP*
Ga0126382_113279563	3300010047	Tropical Forest Soil	FLNWMVLIGAVTPARAEVRYFGELRRINLAAVEWRLG*
Ga0126382_117322233	3300010047	Tropical Forest Soil	GDELHKTGSHEFLNWMVLIGAVTPARADVRYFGELRRLNLAAIEWRVR*
Ga0134082_100823551	3300010303	Grasslands Soil	DELHKSGEHEFLNWMVLIGAITPARADVRYFGELGRINLAAVEWRVE*
Ga0134088_103616163	3300010304	Grasslands Soil	EFLNWMVLLGAVSPARAEVRYFGELPRINLAAVEWNLA*
Ga0134067_102906931	3300010321	Grasslands Soil	WMVLLGAVTPARADVRYFGELPRINMAAVEWRVA*
Ga0134064_100941461	3300010325	Grasslands Soil	HEFLNWMVLIGAVTPARADVRYFGELPRINLAAVEWRMR*
Ga0134080_107023042	3300010333	Grasslands Soil	GEHEFLNWMVLIGAVTPARADVRYFGELGRINLAAVEWRVG*
Ga0126376_105950411	3300010359	Tropical Forest Soil	QTLTSAELHKTGEHEFLNWMVVLGAVTPAPGDLRYFGELGRINLAAFEWRVA*
Ga0126376_112776091	3300010359	Tropical Forest Soil	TGSHEFLNWMVLLGAITPARAEVRYFGELPRINLAAVEWKLG*
Ga0126376_114831051	3300010359	Tropical Forest Soil	LTADELHKTGSHEFLNWMVLLGALTPARAEVRYFGELPRINLAAVEWKIG*
Ga0126376_121575551	3300010359	Tropical Forest Soil	HEFLNWMVLIGAVTPARADVRYFGELRRINMAAVEWRLP*
Ga0126372_105778444	3300010360	Tropical Forest Soil	LTTAELHKTGEHEFLNWLVLIGAVTPARADVRYFGELGRINMAAVEWRLA*
Ga0126372_130302211	3300010360	Tropical Forest Soil	GDELDKSGEHEFLNWMVLLGAISPARAQVRYFGELRRINLAAVEWSLA*
Ga0126377_113149021	3300010362	Tropical Forest Soil	LHEAGGHELLNWMVVAGATAPARAREVYFGELGRINLAAVEWERP*
Ga0126377_119553563	3300010362	Tropical Forest Soil	ADELHKTGSHEFLNWMVLLGALTPARADVRYFGELPRINLAAVEWQLG*
Ga0134125_113855611	3300010371	Terrestrial Soil	EHEFLNWMVLIGAITPARAQVRYFGELRRINLAAVEWSLP*
Ga0126381_1016698234	3300010376	Tropical Forest Soil	EHEFLNWMVLIGAVTPARADVRYFGELPRINMAAVEWRLG*
Ga0134124_113024653	3300010397	Terrestrial Soil	DLTADELHKTGSHEFLNWMVLLGAITPARAEVRYFGELPRINLAAVEWRL*
Ga0134121_102141254	3300010401	Terrestrial Soil	WMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA*
Ga0134123_132139233	3300010403	Terrestrial Soil	LNWIVVAGAVTPARAELRYLGELARINLTAVEWRLA*
Ga0105246_108644683	3300011119	Miscanthus Rhizosphere	WMVLLGAVTPARAQVRYFGELPRINLAAVEWTLA*
Ga0137391_108909951	3300011270	Vadose Zone Soil	DELHKTGSHEFLNWMVLLGAITPARADVRHFGELPRINLAAVEWSLR*
Ga0137393_108577361	3300011271	Vadose Zone Soil	GEHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRLG*
Ga0137464_12287131	3300011434	Soil	ELHKAGEHEFLNWMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA*
Ga0137363_106946321	3300012202	Vadose Zone Soil	GEHEFLNWMVLIGAITPARAQVRYFGELRRINLAAVEWSLR*
Ga0137399_116525431	3300012203	Vadose Zone Soil	DELHKSGGHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRLG*
Ga0137362_111907143	3300012205	Vadose Zone Soil	WMVLLGAVTPARADVRYFGELRRINMAAVEWSLP*
Ga0137386_102376953	3300012351	Vadose Zone Soil	NWMVLIGAVTPARADVRYFGELPRINLAAVEWRMR*
Ga0137384_101946811	3300012357	Vadose Zone Soil	HKTGSHEFLNWMVLIGAVTPARADVRYFGELPRINLAAVEWRMR*
Ga0137361_103858984	3300012362	Vadose Zone Soil	DLTSDELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0137397_112121113	3300012685	Vadose Zone Soil	FLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRLG*
Ga0137396_101344361	3300012918	Vadose Zone Soil	TGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0137396_110923863	3300012918	Vadose Zone Soil	HKTGSHEFLNWMVLIGAVTPARADVRYFGELRRINLAAVEWRVR*
Ga0137394_102454621	3300012922	Vadose Zone Soil	HEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0137394_104032463	3300012922	Vadose Zone Soil	FLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLP*
Ga0137419_103676771	3300012925	Vadose Zone Soil	WMVLLGAVTPARADVRYFGELPRINLAAVEWSLR*
Ga0137404_105385451	3300012929	Vadose Zone Soil	RNLGLDELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0137407_112502092	3300012930	Vadose Zone Soil	NWMVLIGAITPARADVRYFGELGRINLAAVEWRVA*
Ga0137407_121130703	3300012930	Vadose Zone Soil	DKSGEHEFLNWMVLLGAVSPARADVRYFGELPRINMAAVEWRLA*
Ga0137410_109024451	3300012944	Vadose Zone Soil	ADELHKAGEHELLNWIVVAGAVTPAPAELRYFGELARINLTAVEWKLA*
Ga0075331_10904841	3300014310	Natural And Restored Wetlands	ELHKTGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWGLG*
Ga0157380_109800893	3300014326	Switchgrass Rhizosphere	GSHEFLNWMVLLGAVTPARADVRFFGELPRINMAAVEWRL*
Ga0180063_11970453	3300014885	Soil	LNWMVAAGATAPARAREIYFGELGRINLAAVEWDVR*
Ga0180070_10544293	3300015251	Soil	ELHKSGGHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS*
Ga0180089_10140771	3300015254	Soil	KTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLP*
Ga0182007_101558051	3300015262	Rhizosphere	HEFLNWMVLIGAVSPARAQVRYFGELRRINLAAVEWSLP*
Ga0137403_1001739711	3300015264	Vadose Zone Soil	LTADELHKAGEHEFLNWMVLLGAVSPARAVVRYFGELPRINLAAVEWSLA*
Ga0132258_126544533	3300015371	Arabidopsis Rhizosphere	WMVLLGAVSPARADVRYFGELPRINMAAVEWRLP*
Ga0132256_1023351041	3300015372	Arabidopsis Rhizosphere	TSGELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL*
Ga0134112_100395673	3300017656	Grasslands Soil	ATGSHELLNWMVLLGAVAPARARVRFFGEMGRIDLAALEWLLADPQGGHE
Ga0134074_13414781	3300017657	Grasslands Soil	TGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRLR
Ga0184634_104300571	3300018031	Groundwater Sediment	ELHKSGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Ga0184612_104900053	3300018078	Groundwater Sediment	DELHKSGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Ga0066669_120359641	3300018482	Grasslands Soil	FLNWMVLLGAVTPARADVRYFGELPRINMAAVEWRVA
Ga0184645_10847133	3300019233	Groundwater Sediment	HKSGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Ga0184642_16055493	3300019279	Groundwater Sediment	QELTADELHKSGSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Ga0187893_102183301	3300019487	Microbial Mat On Rocks	ELHKAGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0193723_10055266	3300019879	Soil	KTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0193755_10549861	3300020004	Soil	LGVDELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0193735_11640283	3300020006	Soil	NWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0193724_10729723	3300020062	Soil	NWMVLIGAITPARAQVRYFGELRRINLAAVEWSLP
Ga0193719_102055593	3300021344	Soil	GSHEFLNWMVLLGAITPARAEVRYFGELPRINMAAVEWSLS
Ga0224452_10719163	3300022534	Groundwater Sediment	KTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLP
Ga0207684_115245063	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL
Ga0207691_114087021	3300025940	Miscanthus Rhizosphere	DELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0207667_117790753	3300025949	Corn Rhizosphere	KTGEHEFLNWMVLLGAVAPARAQVRYFGELRRINLAAVEWSLP
Ga0207712_111465801	3300025961	Switchgrass Rhizosphere	TADELHKAGEHEFLNWMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA
Ga0209234_11389941	3300026295	Grasslands Soil	EHEFLNWMALIGAVTPARADVRYFGELGRINLAAVEWRIG
Ga0209237_12236892	3300026297	Grasslands Soil	LSGDELHKSGGHEFLNWMVLLGAVSPARADVRYFGELRRINLAAVEWRLA
Ga0209152_100370362	3300026325	Soil	LQELGADELHKTGSHEFLNWMVLIGAVTPARADVRYFGELPRINLAAVEWRMR
Ga0209803_12504243	3300026332	Soil	TVGELHKSGEHEFLNWMVLIGAVTPARADVRYFGELPRINLAAVEWRL
Ga0209474_105571291	3300026550	Soil	ALGPDELHKTGSHEFLNWMVLLGAVSPARAEVRYFGELPRINLAAVEWRLR
Ga0209861_10542543	3300027332	Groundwater Sand	KTGEHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRAP
Ga0209799_10432673	3300027654	Tropical Forest Soil	HKTGSHEFLNWMVLIGAVTPARADVCYFGELRRINLAAIEWRVR
Ga0209588_10975531	3300027671	Vadose Zone Soil	SGGHEFLNWMVLLGAVTPARADVRYFGELRRINLAAVEWRLA
Ga0209180_102955223	3300027846	Vadose Zone Soil	SDELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRLQ
Ga0209283_101711261	3300027875	Vadose Zone Soil	EHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLP
Ga0209590_108203731	3300027882	Vadose Zone Soil	VAELHKAGEHEFLNWMVLIGAVTPARADVRYFGALPRINMAAVEWRLA
Ga0268264_113467921	3300028381	Switchgrass Rhizosphere	EFLNWMVLLGAITPARADVRYFGELRRINLAAVEWRV
Ga0307504_101471573	3300028792	Soil	LNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLS
Ga0307312_105112831	3300028828	Soil	GSHEFLNWMVLLGAVTPARADVRYFGELPRINLAAVEWRL
Ga0247826_109928753	3300030336	Soil	ELHKTGEHEFLNWMVLIGAVSPARAQVRYFGELRRINLAAVEWSLP
Ga0307500_103098831	3300031198	Soil	LTADELHKTGSHEFLNWMVLLGAITPARADIRYFGELPRINLAAVEWRL
Ga0307469_101102901	3300031720	Hardwood Forest Soil	TGEHEFLNWMVLIGAISPARAHVRYFGELRRINLAAVEWSLA
Ga0307469_123797803	3300031720	Hardwood Forest Soil	LHKTGSHEFLNWMVLLGAITPSRADVRYFGELPRINLAAVEWRL
Ga0318547_100756763	3300031781	Soil	NWMVLLGALTPARAEVRYFGELPRINLAAVEWKLG
Ga0306919_103453521	3300031879	Soil	LTADELHKTGSHEFLNWMVLLGALTPARAEVRYFGELPRINLAAVEWKLG
Ga0310890_103972683	3300032075	Soil	LTADELHKTGSHEFLNWMVLLGAVTPARAQVRYFGELPRINMAAVEWTLS
Ga0307471_1041199231	3300032180	Hardwood Forest Soil	ELHKTGSHEFLNWMVLLGAITPARADVRYFGELPRINLAAVEWRL
Ga0307471_1041661542	3300032180	Hardwood Forest Soil	ELHKAGEHEFLNWMVLLGAVSPARAAVRYFGELPRINLAAVEWSLA
Ga0307472_1006739321	3300032205	Hardwood Forest Soil	DELHKTGSHEFLNWMVLLGAITPARAEVRYFGELPRINLAAVEWRL
Ga0307472_1021209353	3300032205	Hardwood Forest Soil	GEHEFLNWMVLIGAITPARAQVRYFGELRRINLAAVEWSLR
Ga0335085_117033403	3300032770	Soil	GHEFLNWMVLIGAVTPAAADVRYFGELPRINMAAVEWRLP
Ga0316628_1028857761	3300033513	Soil	GVDELHKTGEHEFLNWMVLLGAVTPARAQVRYFGELPRINLAAVEWSLP
Ga0247829_101387451	3300033550	Soil	ELHKTGSHEFLNWMVLLGAITPARAEVRYFGELPRINLAAVEWRL
Ga0364934_0005040_4448_4588	3300034178	Sediment	ELDKAGEHEFLNWMTLIGAVTPAPADVRYFGELGRINLAAVEWRLP

Hidden Markov Model


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