Metagenome Family F045614

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045614
Family Type	Metagenome
Number of Sequences	152
Average Sequence Length	65 residues
Representative Sequence	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE
Number of Associated Samples	110
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.74 %
% of genes near scaffold ends (potentially truncated)	36.84 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (24.342 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.605 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.40% β-sheet: 31.91% Coil/Unstructured: 44.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
d.204.1.0: automated matches	d4fyla1	4fyl	0.74006
e.3.1.0: automated matches	d4ovda2	4ovd	0.73954
e.3.1.0: automated matches	d6xqya1	6xqy	0.73927
d.204.1.1: Ribosome binding protein Y (YfiA homologue)	d2ywqa1	2ywq	0.73714
d.204.1.1: Ribosome binding protein Y (YfiA homologue)	d3v2cy_	3v2c	0.73677

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF12146	Hydrolase_4	3.29
PF12695	Abhydrolase_5	3.29
PF05239	PRC	1.97
PF12706	Lactamase_B_2	1.32
PF03951	Gln-synt_N	1.32
PF04250	DUF429	0.66
PF00561	Abhydrolase_1	0.66
PF13683	rve_3	0.66
PF04095	NAPRTase	0.66
PF05711	TylF	0.66
PF07883	Cupin_2	0.66
PF03881	Fructosamin_kin	0.66
PF13442	Cytochrome_CBB3	0.66
PF11953	DUF3470	0.66
PF01513	NAD_kinase	0.66
PF06803	DUF1232	0.66
PF07366	SnoaL	0.66
PF09723	Zn-ribbon_8	0.66
PF01066	CDP-OH_P_transf	0.66
PF00239	Resolvase	0.66
PF14145	YrhK	0.66
PF09361	Phasin_2	0.66
PF00067	p450	0.66
PF00589	Phage_integrase	0.66
PF03692	CxxCxxCC	0.66
PF07885	Ion_trans_2	0.66
PF00909	Ammonium_transp	0.66
PF04392	ABC_sub_bind	0.66
PF08401	ArdcN	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	1.32
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.66
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.66
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.66
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.66
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.66
COG2124	Cytochrome P450	Defense mechanisms [V]	0.66
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3001	Fructosamine-3-kinase	Carbohydrate transport and metabolism [G]	0.66
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.66
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.66
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.24 %
Unclassified	root	N/A	42.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.24 %
Unclassified	root	N/A	42.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.24 %
Unclassified	root	N/A	42.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.03 %
Unclassified	root	N/A	42.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.42 %
Unclassified	root	N/A	42.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.32 %
Candidatus Eremiobacterota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.32 %
unclassified Candidatus Eremiobacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	9.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.66 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.66 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.63 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.32 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.87 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.97 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.32 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.87 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1.97 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.32 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Sinorhizobium medicae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium medicae	0.66 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.66 %
Candidatus Eremiobacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17276441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig140883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	556	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig542511	Not Available	744	Open in IMG/M
2189573002\|GZIGXIF01DEH3N	Not Available	522	Open in IMG/M
2228664021\|ICCgaii200_c0779950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1169	Open in IMG/M
2228664022\|INPgaii200_c0913896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	812	Open in IMG/M
3300000550\|F24TB_10203225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1080	Open in IMG/M
3300000890\|JGI11643J12802_11235133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300000956\|JGI10216J12902_100838391	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300000956\|JGI10216J12902_108042944	Not Available	1021	Open in IMG/M
3300004114\|Ga0062593_101989888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	645	Open in IMG/M
3300004463\|Ga0063356_100395986	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300004633\|Ga0066395_10589817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300004643\|Ga0062591_101340835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300004643\|Ga0062591_101643656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300005093\|Ga0062594_100297843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300005294\|Ga0065705_10564895	Not Available	728	Open in IMG/M
3300005332\|Ga0066388_100326095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2181	Open in IMG/M
3300005332\|Ga0066388_101648421	Not Available	1132	Open in IMG/M
3300005332\|Ga0066388_102027798	Not Available	1032	Open in IMG/M
3300005332\|Ga0066388_103731377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300005455\|Ga0070663_100602440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	924	Open in IMG/M
3300005546\|Ga0070696_101422983	Not Available	592	Open in IMG/M
3300005549\|Ga0070704_100266095	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005713\|Ga0066905_100053822	All Organisms → cellular organisms → Bacteria → Proteobacteria	2483	Open in IMG/M
3300005713\|Ga0066905_101262268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	663	Open in IMG/M
3300005764\|Ga0066903_100524138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2019	Open in IMG/M
3300005764\|Ga0066903_100726779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1757	Open in IMG/M
3300005764\|Ga0066903_101133846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1445	Open in IMG/M
3300005764\|Ga0066903_102037278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1103	Open in IMG/M
3300005764\|Ga0066903_103782584	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005764\|Ga0066903_107487171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	563	Open in IMG/M
3300005841\|Ga0068863_102624625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300005937\|Ga0081455_10034234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	4554	Open in IMG/M
3300005937\|Ga0081455_10318989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1108	Open in IMG/M
3300005937\|Ga0081455_10385335	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300006058\|Ga0075432_10553807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	520	Open in IMG/M
3300006804\|Ga0079221_10703220	Not Available	704	Open in IMG/M
3300006854\|Ga0075425_100088828	All Organisms → cellular organisms → Bacteria → Proteobacteria	3502	Open in IMG/M
3300006854\|Ga0075425_100365548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1661	Open in IMG/M
3300006854\|Ga0075425_100781516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1095	Open in IMG/M
3300006865\|Ga0073934_10035826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4629	Open in IMG/M
3300006871\|Ga0075434_102457899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	522	Open in IMG/M
3300006904\|Ga0075424_100817221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	994	Open in IMG/M
3300006914\|Ga0075436_101019293	Not Available	622	Open in IMG/M
3300006954\|Ga0079219_10831587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	732	Open in IMG/M
3300006969\|Ga0075419_10384326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	959	Open in IMG/M
3300007076\|Ga0075435_100403782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1175	Open in IMG/M
3300009081\|Ga0105098_10167230	Not Available	997	Open in IMG/M
3300009090\|Ga0099827_11436004	Not Available	601	Open in IMG/M
3300009094\|Ga0111539_10790217	Not Available	1104	Open in IMG/M
3300009094\|Ga0111539_11102415	Not Available	922	Open in IMG/M
3300009094\|Ga0111539_11568319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764	Open in IMG/M
3300009094\|Ga0111539_11599171	Not Available	756	Open in IMG/M
3300009146\|Ga0105091_10271057	Not Available	823	Open in IMG/M
3300009147\|Ga0114129_10232133	Not Available	2485	Open in IMG/M
3300009147\|Ga0114129_12903304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	567	Open in IMG/M
3300009147\|Ga0114129_13265860	Not Available	525	Open in IMG/M
3300009174\|Ga0105241_11103596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	747	Open in IMG/M
3300009792\|Ga0126374_10490124	Not Available	883	Open in IMG/M
3300009792\|Ga0126374_11030275	Not Available	648	Open in IMG/M
3300009792\|Ga0126374_11806338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300009818\|Ga0105072_1096029	Not Available	592	Open in IMG/M
3300009836\|Ga0105068_1016335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300010046\|Ga0126384_10098171	Not Available	2154	Open in IMG/M
3300010047\|Ga0126382_11555019	Not Available	611	Open in IMG/M
3300010358\|Ga0126370_10017303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4057	Open in IMG/M
3300010358\|Ga0126370_10278334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1314	Open in IMG/M
3300010358\|Ga0126370_12511814	Not Available	514	Open in IMG/M
3300010361\|Ga0126378_10009637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7814	Open in IMG/M
3300010366\|Ga0126379_10206831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1893	Open in IMG/M
3300010366\|Ga0126379_11642250	Not Available	748	Open in IMG/M
3300010373\|Ga0134128_12253071	Not Available	600	Open in IMG/M
3300010373\|Ga0134128_13113296	Not Available	510	Open in IMG/M
3300010396\|Ga0134126_12593415	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010398\|Ga0126383_10123475	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300010398\|Ga0126383_10288951	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300010400\|Ga0134122_11123638	Not Available	780	Open in IMG/M
3300010868\|Ga0124844_1011672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2198	Open in IMG/M
3300010868\|Ga0124844_1303262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012204\|Ga0137374_10113814	All Organisms → cellular organisms → Bacteria → Proteobacteria	2509	Open in IMG/M
3300012350\|Ga0137372_10530633	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300012508\|Ga0157315_1027170	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300012892\|Ga0157294_10166474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300012915\|Ga0157302_10377563	Not Available	577	Open in IMG/M
3300012930\|Ga0137407_12170371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300012948\|Ga0126375_10109442	Not Available	1658	Open in IMG/M
3300012948\|Ga0126375_10489594	Not Available	914	Open in IMG/M
3300012948\|Ga0126375_10934420	Not Available	700	Open in IMG/M
3300012951\|Ga0164300_10268957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	875	Open in IMG/M
3300012955\|Ga0164298_10862424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	655	Open in IMG/M
3300012957\|Ga0164303_10133641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1287	Open in IMG/M
3300012957\|Ga0164303_10520195	Not Available	766	Open in IMG/M
3300012958\|Ga0164299_10179542	Not Available	1203	Open in IMG/M
3300012958\|Ga0164299_10417408	Not Available	867	Open in IMG/M
3300012960\|Ga0164301_10321593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300012960\|Ga0164301_11492811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300012964\|Ga0153916_11980782	Not Available	653	Open in IMG/M
3300012985\|Ga0164308_11359543	Not Available	647	Open in IMG/M
3300012986\|Ga0164304_11824431	Not Available	509	Open in IMG/M
3300012989\|Ga0164305_10961795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	723	Open in IMG/M
3300012989\|Ga0164305_11578266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	585	Open in IMG/M
3300013306\|Ga0163162_10619742	Not Available	1207	Open in IMG/M
3300014320\|Ga0075342_1090130	Not Available	789	Open in IMG/M
3300014969\|Ga0157376_12361549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300015200\|Ga0173480_10428228	Not Available	775	Open in IMG/M
3300015371\|Ga0132258_10671710	Not Available	2607	Open in IMG/M
3300015372\|Ga0132256_100567931	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300015372\|Ga0132256_103432387	Not Available	533	Open in IMG/M
3300015373\|Ga0132257_102316040	Not Available	696	Open in IMG/M
3300015374\|Ga0132255_100590921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1641	Open in IMG/M
3300016357\|Ga0182032_10262434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1348	Open in IMG/M
3300016404\|Ga0182037_11551449	Not Available	588	Open in IMG/M
3300017792\|Ga0163161_10720536	Not Available	832	Open in IMG/M
3300017792\|Ga0163161_10959112	Not Available	728	Open in IMG/M
3300017959\|Ga0187779_10367354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300017974\|Ga0187777_10339515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300017974\|Ga0187777_10378845	Not Available	976	Open in IMG/M
3300018060\|Ga0187765_10306656	Not Available	954	Open in IMG/M
3300018476\|Ga0190274_13363024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium medicae	539	Open in IMG/M
3300019356\|Ga0173481_10051494	Not Available	1419	Open in IMG/M
3300019458\|Ga0187892_10001474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	53556	Open in IMG/M
3300021560\|Ga0126371_10339890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1634	Open in IMG/M
3300022886\|Ga0247746_1086698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300023073\|Ga0247744_1049922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300023077\|Ga0247802_1047995	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300025310\|Ga0209172_10108328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1581	Open in IMG/M
3300025901\|Ga0207688_11099247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300025916\|Ga0207663_11142463	Not Available	626	Open in IMG/M
3300025928\|Ga0207700_10885064	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300025939\|Ga0207665_11377876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Eremiobacterota → unclassified Candidatus Eremiobacteraeota → Candidatus Eremiobacteraeota bacterium	562	Open in IMG/M
3300027424\|Ga0209984_1035191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300027876\|Ga0209974_10160578	Not Available	815	Open in IMG/M
3300027909\|Ga0209382_11367064	Not Available	714	Open in IMG/M
3300030619\|Ga0268386_10057343	Not Available	3059	Open in IMG/M
3300031229\|Ga0299913_11235936	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300031545\|Ga0318541_10576253	Not Available	630	Open in IMG/M
3300031573\|Ga0310915_10120492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1791	Open in IMG/M
3300031716\|Ga0310813_12147146	Not Available	528	Open in IMG/M
3300031720\|Ga0307469_10638524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	957	Open in IMG/M
3300031744\|Ga0306918_11387420	Not Available	539	Open in IMG/M
3300031833\|Ga0310917_10223383	Not Available	1264	Open in IMG/M
3300031912\|Ga0306921_10951599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	972	Open in IMG/M
3300032001\|Ga0306922_10344168	Not Available	1600	Open in IMG/M
3300032001\|Ga0306922_10783567	Not Available	998	Open in IMG/M
3300032063\|Ga0318504_10629088	Not Available	516	Open in IMG/M
3300032174\|Ga0307470_10920816	Not Available	688	Open in IMG/M
3300032174\|Ga0307470_11560084	Not Available	551	Open in IMG/M
3300032180\|Ga0307471_100719181	Not Available	1164	Open in IMG/M
3300032180\|Ga0307471_102252957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	687	Open in IMG/M
3300033551\|Ga0247830_10529888	Not Available	928	Open in IMG/M
3300033551\|Ga0247830_11144188	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.66%
Host-Associated	Host-Associated	24.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.37%
Plants	Host-Associated → Plants	24.34%
Aquatic	Environmental → Aquatic	3.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.87%
Freshwater	Environmental → Aquatic → Freshwater	1.97%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.32%
Cave	Environmental → Terrestrial → Cave	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.29%
Loam	Environmental → Terrestrial → Soil → Loam	13.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.32%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.32%
Sand	Environmental → Terrestrial → Soil → Sand	1.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.32%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.66%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.32%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.32%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.66%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01673010	2088090014	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC
KansclcFeb2_14796630	2124908045	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTM
KansclcFeb2_07524450	2124908045	Soil	MRKRTVKLHGHHCEISVHREGKHFWIAVGDYLGTEIRAEAESERAAVKRWREKASQEESPPAAR
FE1_00073550	2189573002	Grass Soil	MRKHTVKIHGHHCEIRVYREGKHLWFAVGDYLGQEIKVQADSEGAAVKRWRERAAAMDNTACE
ICCgaii200_07799501	2228664021	Soil	MRKHTVKIHGYHCEIRVDQEGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN
INPgaii200_09138963	2228664022	Soil	KHTVKIHGYHCEIRVDQEGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN
F24TB_102032252	3300000550	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERTAHD*
JGI11643J12802_112351334	3300000890	Soil	MRKHTVKIHGYHCEIRVDQEGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN*
JGI10216J12902_1008383913	3300000956	Soil	IHGHHCEIRVDREGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN*
JGI10216J12902_1080429441	3300000956	Soil	LHGHHCEISVHREGKHFWIAVGDYLGTEIRAEAESERAAVKRWREKASQEESPPAAR*
Ga0062593_1019898882	3300004114	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGNEIRAEAESERAAIKRWRETASTMGN*
Ga0063356_1003959861	3300004463	Arabidopsis Thaliana Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0066395_105898171	3300004633	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWFAVGDYLGKEIRAQAENERAAVNRWRETASKMVPERPGHE*
Ga0062591_1013408352	3300004643	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGNEIRAEAESERAAIKRWRETASTMGN*
Ga0062591_1016436562	3300004643	Soil	RHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKCWRETASTMVTTERAGHE*
Ga0062594_1002978431	3300005093	Soil	RSLQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0065705_105648952	3300005294	Switchgrass Rhizosphere	MRKHTVKLHGHHCEISVHREAKHIWLAVGGYLGKEIRAQAESEGAAVKRWRETASTTVTTERAG
Ga0066388_1003260956	3300005332	Tropical Forest Soil	VRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGAAVKRWRERASTMGN*
Ga0066388_1016484212	3300005332	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAEREGAAVKRWRETASTMVTPESASHE*
Ga0066388_1020277984	3300005332	Tropical Forest Soil	SMEEDAIMRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGAAVKRWRERASTMDN*
Ga0066388_1037313771	3300005332	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHIWFAVGDYLGKEIRAQAESEGAAVKRWRETASTMGATERA
Ga0070663_1006024402	3300005455	Corn Rhizosphere	CRLSGSRSLQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0070696_1014229832	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRTVKLHGHHCEISVHREGKPVWIAVGDYLSKEIRTEAESERAAVKRWREKASQAESPPTAC*
Ga0070704_1002660953	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0066905_1000538224	3300005713	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETASTMVTIERVGHE*
Ga0066905_1012622681	3300005713	Tropical Forest Soil	HGHHCEIRVYREGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDY*
Ga0066903_1005241383	3300005764	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHIWFAVGDYLGKEIRAQAESEGAAVKRWRETASTMGATERAGRE*
Ga0066903_1007267794	3300005764	Tropical Forest Soil	AIMRKHTVKLHGHHCEISVHREGKHIWLAVGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTSRE*
Ga0066903_1011338463	3300005764	Tropical Forest Soil	MRKRTVKLQGRHCEISVHREGKHVWIALGDYLGKEIRAQAESEGAAVKRWRQTASTMVTTERAGHE*
Ga0066903_1020372781	3300005764	Tropical Forest Soil	LTIAIMRKHTVKLHGHHCEISVHREGKHIWLAVGDYLGKEIRVQAESEGTAVKRWRETASTTVATERASRE*
Ga0066903_1037825842	3300005764	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWFAVGDYLGKEIRAQAESERAAVNRWRETASKMVPERPGHE*
Ga0066903_1074871711	3300005764	Tropical Forest Soil	AIMRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVKAESEGAAVKRWRERASTMDN*
Ga0068863_1026246252	3300005841	Switchgrass Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESARAAVKRWREKASQAESPPAAC*
Ga0081455_100342344	3300005937	Tabebuia Heterophylla Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMGTTERAGHE*
Ga0081455_103189892	3300005937	Tabebuia Heterophylla Rhizosphere	VKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAENEGAAVKRWRETASTIVTTERAAHD*
Ga0081455_103853351	3300005937	Tabebuia Heterophylla Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAIKRWRETASTMVTTERVGHE*
Ga0075432_105538071	3300006058	Populus Rhizosphere	CSLTIPIMRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAGHE*
Ga0079221_107032202	3300006804	Agricultural Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQEESPPATGS*
Ga0075425_1000888289	3300006854	Populus Rhizosphere	RKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTPERAGHE*
Ga0075425_1003655484	3300006854	Populus Rhizosphere	MRKHTVKIHGYHCEIRVDREGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN*
Ga0075425_1007815163	3300006854	Populus Rhizosphere	MRKRTVKLHGRHCDISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE*
Ga0073934_100358266	3300006865	Hot Spring Sediment	MRKRTVKLHGRHCEISLHREGKHVWIAVGDYLDKEIRAQAESEGAAVKRWREIASTMTPTERHGRGE*
Ga0075434_1024578991	3300006871	Populus Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTPERAGHE*
Ga0075424_1008172212	3300006904	Populus Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAGHE*
Ga0075436_1010192931	3300006914	Populus Rhizosphere	GRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAGHE*
Ga0079219_108315871	3300006954	Agricultural Soil	TITIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0075419_103843263	3300006969	Populus Rhizosphere	RLTITIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0075435_1004037823	3300007076	Populus Rhizosphere	FAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTPERAGHE*
Ga0105098_101672302	3300009081	Freshwater Sediment	LDEISGHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAAHD*
Ga0099827_114360042	3300009090	Vadose Zone Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE*
Ga0111539_107902173	3300009094	Populus Rhizosphere	MRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGTAVKRWRERASTMGN*
Ga0111539_111024153	3300009094	Populus Rhizosphere	LQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTPERAGHE*
Ga0111539_115683191	3300009094	Populus Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESLPAAC*
Ga0111539_115991711	3300009094	Populus Rhizosphere	IMRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAGHE*
Ga0105091_102710573	3300009146	Freshwater Sediment	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTIVTTERAAHD*
Ga0114129_102321332	3300009147	Populus Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASIIVTTERADHE*
Ga0114129_129033042	3300009147	Populus Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKCWRETASTMVTTERA
Ga0114129_132658601	3300009147	Populus Rhizosphere	HGRHCDISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE*
Ga0105241_111035961	3300009174	Corn Rhizosphere	KRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0126374_104901242	3300009792	Tropical Forest Soil	MEEDAMMRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGAAVKRWRERASTMDN*
Ga0126374_110302751	3300009792	Tropical Forest Soil	MRKHTVKLHGHHCEISVHREGKHIWLAVGDYIAKDIRVPAESEGTAVKRWREKASTTVATERTSRE*
Ga0126374_118063381	3300009792	Tropical Forest Soil	MRKRTVKLHGHHCQISVHREGKHVWFAVGDYLGNEIRAQAESERAAVNRWRETASKMVATERPGHE*
Ga0105072_10960291	3300009818	Groundwater Sand	MKKRTVKLHGRHCKISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE*
Ga0105068_10163352	3300009836	Groundwater Sand	MRKHTVKIHGHHCEIRVYREGKHLWFAVGDYLGQEIKVQAESEGAAVKRWRERAAAMDN*
Ga0126384_100981713	3300010046	Tropical Forest Soil	MEEDAIMRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGAAVKRWRERASTMDN*
Ga0126382_115550191	3300010047	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHIWFAVGDYLGKEIRAQAESEGAAVKRWRETASTMGATERTGRE*
Ga0126370_100173032	3300010358	Tropical Forest Soil	MRKRTVKLHGRHCEISVLREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETASTMVTIERVGHE*
Ga0126370_102783341	3300010358	Tropical Forest Soil	MRKRTVKLHGHHCQISVHREGKHVWFAVGDYLGKEIRAQAESERAAVNRWRETASKMMATER
Ga0126370_125118141	3300010358	Tropical Forest Soil	MEEDAIMRKHTVKIHGHHCEIRVYREGKHDWFAVGDYLGQEIKVQAESEGAAMKRWRERASTMDN*
Ga0126378_1000963711	3300010361	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETASTMVTTERVGHE*
Ga0126379_102068312	3300010366	Tropical Forest Soil	TEEIAIMRKRTVKLHGHHCQITVHREGKHVWFAVGDYLGNEIRAQAESERGAVNRWRETASKMVATERPGHE*
Ga0126379_116422501	3300010366	Tropical Forest Soil	MRKHTVKLHGHHCQISVHREGNHIWLAVGDYLGKEIRVQAESEGTAVKRWRETASTAVATERTSHK*
Ga0134128_122530711	3300010373	Terrestrial Soil	MRKHTVKLHGHHCEISVHREAKHIWLAVGGYLGKEIRAQAESEGAAVKRWRETASTTV
Ga0134128_131132961	3300010373	Terrestrial Soil	MRKRTLKLHGRHCEISVHREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETASTMVTIERVGHE*
Ga0134126_125934151	3300010396	Terrestrial Soil	CSLTITIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGNEIRAEAESECAAIKRWRETASTMGN*
Ga0126383_101234754	3300010398	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETAS
Ga0126383_102889512	3300010398	Tropical Forest Soil	VKLHGRHCEISVHREGKHVWIAVGDYLGKKIRAQAESEGAAVKRWRETASTMVTTERAGQE*
Ga0134122_111236382	3300010400	Terrestrial Soil	MRKRTVKLHGHHCEISVHREGKPVWIAVGDYLSKEIRTEAESERAAVKRWREKASQAES
Ga0124844_10116723	3300010868	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHDWFAVGDYLGKEIRAQAESERAAVNRWRETASKMVPERPGHE*
Ga0124844_13032623	3300010868	Tropical Forest Soil	MRKRTVKLHGRHCEISVHREGKHVWFAVGDYLGKEIRAQAESERAAVNRWRETASKMVP
Ga0137374_101138145	3300012204	Vadose Zone Soil	MRKRTVKLHGRHCEISLHREGKHIWLAVGDYLGKEIRAQAESEGAAVKRWRETASTMVATERAGRE*
Ga0137372_105306332	3300012350	Vadose Zone Soil	MRKRTVKLHGRHCEISVHREGKHIWFAVGDYLGKEIRAQAESEGAAVKRWRETASTMVATERAGRE*
Ga0157315_10271702	3300012508	Arabidopsis Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQQKDRQRRADGPA*
Ga0157294_101664741	3300012892	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0157302_103775631	3300012915	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWRETASTMVTPERAGHE*
Ga0137407_121703712	3300012930	Vadose Zone Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRTQAESEGAAVKRWRETASTMVTTERAGHE*
Ga0126375_101094424	3300012948	Tropical Forest Soil	VKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERA
Ga0126375_104895941	3300012948	Tropical Forest Soil	VRKHTVKIHGRHCEISVYREGKHDWFAVGDYLGQEIKVQAESEGAAVKRWRERASTMGN*
Ga0126375_109344201	3300012948	Tropical Forest Soil	MTPEEIAIMRKRTVKLHGHHCEISVHREGKHVWFAVGDYLGKEIRAQAGSERAAVNRWRETASKMVATERPGHE*
Ga0164300_102689572	3300012951	Soil	MRKHTVKLHGHHCQISVHREGKHMWPAVGDYLGKEIRVQTESEGTAVKRWRETASTTVATERESRK*
Ga0164298_108624242	3300012955	Soil	MRKHTVKLHGHHCEISVHREAKHIWLAVGGYLGKEIRAQAESEGAAVKRWRETASTTVQLERASRK*
Ga0164303_101336412	3300012957	Soil	MRKHTVKLHGHHCQISVHREGRHTWFAVGDYLGKEIRVQAESEGAAVKRWRETASTTVATARTSRE*
Ga0164303_105201952	3300012957	Soil	MRKHTVKLHGHHCEISVHREAKHIWLAVGGYLGKEIRAQAESEGAAVKRWRETASTTVATGKGQPRIVG*
Ga0164299_101795422	3300012958	Soil	MRKHTVKLHGHHCEISVHREAKHIWLAVGGYLGKEIRAQAESEGAAVKRWRETASTTVTTERAGHE*
Ga0164299_104174082	3300012958	Soil	MRKHTVKLHGHHCQISVRREGKHMWLAVGDYLGKEIRVQTESEGTAVKRWRETASTTVATERESRK*
Ga0164301_103215931	3300012960	Soil	RKHTVKMHGDQCCISVYREGKHLWFAVGDYLGQEIKVQAESEGAAVKCWRERAAAMDNTACE*
Ga0164301_114928111	3300012960	Soil	MRKHTMKLHGHHCQISVHREGRHTWFAVGDYLGKEIRVQAESEGAAVKRWRETASTTVATERE*
Ga0153916_119807821	3300012964	Freshwater Wetlands	MRKRIVKLHGRHCEISVHREGKHVWIAASDYLGKEIRAQAESEGAAVKRWREIASTMVPTERAGHE*
Ga0164308_113595432	3300012985	Soil	MRKHTVKLHGHHCEISVHREAKHIWLAVGDYLGKEIRAQAESEGAAVKRWRETASTTVATGKGQPRIVG*
Ga0164304_118244311	3300012986	Soil	MRKHTVKLHGHHCEISVHREGKHTWFAVGEYLGKEIRVHAESEGAAVKRWRETASTTVATERASRE*
Ga0164305_109617952	3300012989	Soil	IAIMRKHTVKLHGHHCEISVHREAKHIWLAVGDYLGKEIRVQAESEGAAVKRWRETASTTVATARTSRE*
Ga0164305_115782661	3300012989	Soil	IAIMRKHTVKLHGHHCEISVHREAKHIWLAVGDYLGKEIRAQAESEGAAVKRWRETASTTVATERE*
Ga0163162_106197423	3300013306	Switchgrass Rhizosphere	MRKHTVKLHGHHCEISVHREGKHTWFAVGEYLGKEIRVHAESEGAAVKRWREAASTTVATERASRE*
Ga0075342_10901302	3300014320	Natural And Restored Wetlands	MRKHTVKLHGHHCEISVHREGKHIWSAVGDYLGKEIRVQAESEGAAVKRWREAASTMDATERTAPKLQ*
Ga0157376_123615492	3300014969	Miscanthus Rhizosphere	LTGSRSLQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC*
Ga0173480_104282281	3300015200	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQEENEGAAVKRWRETASTMVTPERAGHE*
Ga0132258_106717105	3300015371	Arabidopsis Rhizosphere	HGHHCEISVHREGKHTWLAVGDYLGKEIRVHADSEGAAVKRWRETASTTVVAERGRE*
Ga0132256_1005679311	3300015372	Arabidopsis Rhizosphere	VKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTIERVGHE*
Ga0132256_1034323871	3300015372	Arabidopsis Rhizosphere	MRKHTVKLHGHHCEISVHREGKHTWLAVGDYLGKEIRVHAESEGAAVKRWRETASTTVVAERGRE*
Ga0132257_1023160402	3300015373	Arabidopsis Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRAEAESEGAAVKRWRETASTMGVTERAGHE*
Ga0132255_1005909213	3300015374	Arabidopsis Rhizosphere	MVRRAICCPRDCSLTIAIIKKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPQAAC*
Ga0182032_102624342	3300016357	Soil	IIRKPTVKLHDNQCEISVHREGKHSWLAAGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTSRE
Ga0182037_115514491	3300016404	Soil	MKKRTVKFHGHHCEISVHREGKHIWIAVGDYLGKEIRAQAESERAAVNRWRETALKMVATDRPGHE
Ga0163161_107205361	3300017792	Switchgrass Rhizosphere	MRKHTVKLHGHHCEISVHREGKHTWFAVGEYLGKEIRVHAESEGAAVKRWREAASTTVATERASRE
Ga0163161_109591122	3300017792	Switchgrass Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC
Ga0187779_103673542	3300017959	Tropical Peatland	MRKHTVKLHGHHCQVSVHREGKHGWFAVGDYLGKEISVQAESEGAAVKRWRETASTKVST
Ga0187777_103395151	3300017974	Tropical Peatland	MRKHTVKLHGHHCQVSVHREGKHVWFAVGDYLGKEISVQAESEGAAVKRWRETASTKVST
Ga0187777_103788452	3300017974	Tropical Peatland	MRKHTVKIHGHHCEVRVYREGKHVWFAVGDYLGHEIKVEAESEVAVVKRWRESASTMGHESLR
Ga0187765_103066561	3300018060	Tropical Peatland	MGKHTVKLHGHHCQASVHREGKHVWFAVGDYLGKEISVQAESEGAAVKRWRETASTKVST
Ga0190274_133630242	3300018476	Soil	MRKRTVKLHGRHCEISVHREGKHGWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGQE
Ga0173481_100514942	3300019356	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTPERAGHE
Ga0187892_1000147419	3300019458	Bio-Ooze	MRKHTVKLHGRHCQIRVHREGKHVWFAVGDYLGKEIRAQAESEGAAVKRWRETASTMGAIERAGRE
Ga0126371_103398901	3300021560	Tropical Forest Soil	MRKRTVKLHGHHCQISVHREGKHVWFAVGDYLGNEIRAQAESERGAVNRWRETASKMVATERPGH
Ga0247746_10866982	3300022886	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKALQAESPPTAC
Ga0247744_10499221	3300023073	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKTSQAESPPAAC
Ga0247802_10479951	3300023077	Soil	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQ
Ga0209172_101083283	3300025310	Hot Spring Sediment	MRKRTVKLHGRHCEISLHREGKHVWIAVGDYLDKEIRAQAESEGAAVKRWREIASTMTPTERHGRGE
Ga0207688_110992471	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RLSGSRSLQFAIMRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC
Ga0207663_111424631	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRTVKLHGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWRETASTMVTPERAGHE
Ga0207700_108850642	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEVRAQAESEGTAVKRWRETASTMVTTERAGHE
Ga0207665_113778761	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	CEISVHREGKHVWIAVGDYLGKKIRAQAESEGAAVKRWRETASTMVTTERAGQE
Ga0209984_10351911	3300027424	Arabidopsis Thaliana Rhizosphere	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMMTTERDGHEGPGALTPSAS
Ga0209974_101605781	3300027876	Arabidopsis Thaliana Rhizosphere	MRKRTVKLHGRHCDISVHREGKHVWIAVGDYLGKEIRAQAESEGATVKRWRETASTMVTTERAGHE
Ga0209382_113670641	3300027909	Populus Rhizosphere	VKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGH
Ga0268386_100573436	3300030619	Soil	VKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWREAASTMVTTDRAGH
Ga0299913_112359361	3300031229	Soil	MRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE
Ga0318541_105762531	3300031545	Soil	MRKHTVKLHGHHCEISVHREGKHIWLAAGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTSRE
Ga0310915_101204921	3300031573	Soil	LTIATMKKRTVKLHGHHCEISVHREGKHIWLAAGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTSRE
Ga0310813_121471462	3300031716	Soil	MRKRTVKLQGHHCEISVHREGKHVWIAVGDYLGKEIRTEAESERAAVKRWREKASQAESPPAAC
Ga0307469_106385241	3300031720	Hardwood Forest Soil	MRKHTVKLHGHHCEISVHREGKHTWFAVGEYLGKEIRVHAESEGAAVKRWREAASTTVATERASREIK
Ga0306918_113874201	3300031744	Soil	MRKRTVKLHGRHCEISVHREGKHVWFAVGDYLGKEIRAQAESERAAVNRWRETAS
Ga0310917_102233832	3300031833	Soil	MRKHTVKLHGHHCEISVHREGKHIWLAAGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTNRE
Ga0306921_109515993	3300031912	Soil	TTEETATMRKRTVKLHGHHCQISVHREGKHVWFAVGDYLGKEIRAQAESERAAVNRWRETASKMVATERGSFRSSP
Ga0306922_103441682	3300032001	Soil	MRKHTVKLHGHHCEISVHREGKHVWMAVGDYLGKEIRAQAESESAAVKRWRETASTTVSTEKAGHE
Ga0306922_107835672	3300032001	Soil	MKKRTVKFHGHHCEISVHREGKHTWIAVGDYLGKEIRAQAESERAAVNRWRENASKMVATERPGYE
Ga0318504_106290881	3300032063	Soil	VKLHGHHCEISVHREGKHIWLAAGDYLGKEIRVQAESEGTAVKRWREKASTTVATERTSR
Ga0307470_109208162	3300032174	Hardwood Forest Soil	MRKHTVKLHGHHCEISVHREGKHTWLAVGDYLGKEIRVQAESEGTAVKRWRETASTTVATGKGQPRIVG
Ga0307470_115600842	3300032174	Hardwood Forest Soil	MRKRTLKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE
Ga0307471_1007191813	3300032180	Hardwood Forest Soil	MRKHTVKLHGHHCQISVHREGRHTWFAVGDYLGKEIWVQAESEGAAVKRWRETASTTVATERE
Ga0307471_1022529571	3300032180	Hardwood Forest Soil	VGIRALEIALAIMRKHTVKLHGHHCEISVHREAKHIWLAVGDYRGKEIRAQAESEGAAVKRWRETASTTVAP
Ga0247830_105298884	3300033551	Soil	VKLHGHHCEISVHREGKHTWFAVGEYLGKEIRVHAESEGAAVKRWREAASTTVATERASR
Ga0247830_111441882	3300033551	Soil	CSLTIAIMRKRTVKLHGRHCEISVHREGKHVWIAVGDYLGKEIRAQAESEGAAVKRWRETASTMVTTERAGHE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F045614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences