Metagenome / Metatranscriptome Family F045334

Overview

Basic Information

• Family ID: F045334
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 153
• Average Sequence Length: 43 residues
• Representative Sequence: MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPL
• Number of Associated Samples: 127
• Number of Associated Scaffolds: 153

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 88.82 %
• % of genes near scaffold ends (potentially truncated): 99.35 %
• % of genes from short scaffolds (< 2000 bps): 88.89 %
• Associated GOLD sequencing projects: 121
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (58.170 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.876 % of family members)
• Environment Ontology (ENVO): Unclassified (29.412 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.634 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 33.80%
  β-sheet: 0.00%
  Coil/Unstructured: 66.20%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF04343	DUF488	5.23
PF03401	TctC	2.61
PF02798	GST_N	2.61
PF04392	ABC_sub_bind	1.96
PF01520	Amidase_3	1.96
PF01227	GTP_cyclohydroI	1.96
PF00528	BPD_transp_1	1.96
PF00326	Peptidase_S9	1.31
PF01464	SLT	1.31
PF05099	TerB	1.31

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	5.23
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.61
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.96
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	1.31
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.31
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.31
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.65
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.65
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.65

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.17 %
Unclassified	root	N/A	41.83 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.17 %
Unclassified	root	N/A	41.83 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.17 %
Unclassified	root	N/A	41.83 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %
Unclassified	root	N/A	41.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.37 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.65 %
Unclassified	root	N/A	41.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.31 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.03 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.65 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.65 %
Unclassified	root	N/A	41.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.23 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.65 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.31 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.23 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.65 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.65 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.65 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.65 %
Pseudoxanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae	0.65 %
Unclassified	root	N/A	41.83 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %

Level 8

Name	Rank	Taxonomy	Distribution
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.61 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.65 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.65 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.65 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.65 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.65 %
Unclassified	root	N/A	41.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %

Level 9

Name	Rank	Taxonomy	Distribution
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Unclassified	root	N/A	41.83 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.65 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %

Level 10

Name	Rank	Taxonomy	Distribution
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.65 %
Unclassified	root	N/A	41.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %

Level 11

Name	Rank	Taxonomy	Distribution
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.65 %
Unclassified	root	N/A	41.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000580|AF_2010_repII_A01DRAFT_1001742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3476
3300003505|JGIcombinedJ51221_10268623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694
3300004152|Ga0062386_100638140	Not Available	872
3300004633|Ga0066395_10122573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285
3300005332|Ga0066388_100374206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2071
3300005332|Ga0066388_105325092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	652
3300005332|Ga0066388_105906991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619
3300005339|Ga0070660_100408041	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124
3300005347|Ga0070668_101960217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540
3300005549|Ga0070704_100484495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	1071

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.66%
Host-Associated	Host-Associated	16.34%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.88%
Fungi	Host-Associated → Fungi	0.65%
Plants	Host-Associated → Plants	15.69%
Terrestrial	Environmental → Terrestrial	77.78%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.65%
Peat	Environmental → Terrestrial → Peat	1.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.42%
Roots	Host-Associated → Plants → Roots	0.65%
Sediment	Environmental → Aquatic → Sediment	3.92%
Soil	Environmental → Terrestrial → Soil	76.47%

Type

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Loam	Environmental → Terrestrial → Soil → Loam	12.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.31%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.65%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.65%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.31%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.27%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10017421	3300000580	Forest Soil	MHAAARLLAALILAAAGSAVAQEKHLIDPTPPGSLNP
JGIcombinedJ51221_102686231	3300003505	Forest Soil	MRAAARLVAVFLFALAGSAAAQEKHLIDPTPPGSLNPEPL
Ga0062386_1006381403	3300004152	Bog Forest Soil	MRATVRLLAILILAAAGSAVAQEKHLIDPTPPGSLNPEPLPP
Ga0066395_101225732	3300004633	Tropical Forest Soil	MRAVVCLLAALFLAAASSAVAQEKHLIDPMLPGSLDPKPLPPLKNPDAPS
Ga0066388_1003742063	3300005332	Tropical Forest Soil	MRHRLIRWLLMRAAGRLLAVLLFAAAGSAVAQQKHLIDSTPPGSLNPEPL
Ga0066388_1053250921	3300005332	Tropical Forest Soil	MRAAACLLAVLVFAAAGTAAAQEKPAIDRMRPGSLNPEPLP
Ga0066388_1059069911	3300005332	Tropical Forest Soil	MRAVVCLLAVFFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0070660_1004080413	3300005339	Corn Rhizosphere	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPLQNPDA
Ga0070668_1019602172	3300005347	Switchgrass Rhizosphere	MVRMAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPEPLPPLRNP
Ga0070704_1004844951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVVCLLAVLFSAATSSAVAQEKHLIDPMLPGSLNPRPLP
Ga0068857_1010303933	3300005577	Corn Rhizosphere	MRFVLCLLAVLFLAAAGSAVAQEKHLIDPMLPGSLNPKPLPPL
Ga0066905_1004600251	3300005713	Tropical Forest Soil	MRAVVCLLAVLFAAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0066905_1018497602	3300005713	Tropical Forest Soil	MRAVTCLLAALFLAAADSAAAQETHLIDPMLPGSLNPKPLPPLKN
Ga0066903_1007761254	3300005764	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLN
Ga0066903_1011860601	3300005764	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPS
Ga0066903_1024423773	3300005764	Tropical Forest Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNP
Ga0066903_1027220721	3300005764	Tropical Forest Soil	MRAVLCLLAVLFHAAANSAVAQEKHSIDPMLPGTLDPKPL
Ga0066903_1041617241	3300005764	Tropical Forest Soil	MRPVLRLLAVLFLVAAGSAIAQEKHLIDPMLPGSLNPKP
Ga0066903_1049334292	3300005764	Tropical Forest Soil	MRAALCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNP
Ga0066696_110274391	3300006032	Soil	MAAVVCLLAVLFLAAASSAVAQDKHLIDPMLPGSLDPKPLPPLKNPDAPS
Ga0075365_100757305	3300006038	Populus Endosphere	MRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKN
Ga0075028_1010111821	3300006050	Watersheds	MRAAAHLLAVLLLAAVGSAFAREKHLIDPTPPGSLNPE
Ga0075017_1001690911	3300006059	Watersheds	MRAAPRMLAILMLGAAVSATAQEKHLIDPTPPGSLN
Ga0075015_1004031471	3300006102	Watersheds	MRGAACLLLLFLAAAGSAVAQEKNLIDPMLPGSLNPKP
Ga0075018_104414952	3300006172	Watersheds	MRAVACLLTVLFLAGAGSAVAEEKHLIDPMLPGSLNPKPLPPLK
Ga0075021_101696303	3300006354	Watersheds	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPL
Ga0079220_114735561	3300006806	Agricultural Soil	MRAVICLVAVLVLAAVSSAVAQETHLIDPMLPGSLNPKPLPPLKN
Ga0075421_1013515252	3300006845	Populus Rhizosphere	MRAVACLLALLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPS
Ga0075433_106363652	3300006852	Populus Rhizosphere	MRAVVCLLAVLFSAATSSAVAQEKHLLDPMLPGSLDPKPLPPLKNPDAPS
Ga0075433_119311942	3300006852	Populus Rhizosphere	MRQGIHKKLLLMRAAACLLAVLILAAADSAVAQEKHLIDPMHPGSLNPE
Ga0075425_10007041810	3300006854	Populus Rhizosphere	MRQGIHKKLLLMRAAACLLAVLILAAADSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0075429_1006250043	3300006880	Populus Rhizosphere	MRAVVWLLALLFLAAAGTIAAQEKPAIDRIRPGSLNPEPLPPLQNPNAPSTP
Ga0111539_130526662	3300009094	Populus Rhizosphere	MRAVVCLLAILFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALS
Ga0075418_119176752	3300009100	Populus Rhizosphere	MRAVACLLAVLFLAAAGSAVAQEKHLIDPMLPGSLNPEPLPPLQNPEAPSTPA
Ga0099792_110909561	3300009143	Vadose Zone Soil	MRAVVCLLTVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDA
Ga0114129_105754231	3300009147	Populus Rhizosphere	MRAVACLLALLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0114129_113508853	3300009147	Populus Rhizosphere	MRAVACLLAVLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0116218_11777751	3300009522	Peatlands Soil	MRAAARLLAVLMLAAASSAIAQEKHLIDPTPPGSLNPEP
Ga0105237_117535131	3300009545	Corn Rhizosphere	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPLQNP
Ga0126380_100148726	3300010043	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLEN
Ga0126382_100130898	3300010047	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLENPD
Ga0126382_115091132	3300010047	Tropical Forest Soil	MRAVVCVLAVLFLAAASSAVAQERHLIDRMLPGSLNPRPLPPLKNPD
Ga0126373_121887551	3300010048	Tropical Forest Soil	MRIAARLLAVLILAGTGSDVAQEKHLMDTTPPGLLD
Ga0127503_101990461	3300010154	Soil	MRAAAHLLAVLLLAAAGSAFAREKHLIDPTPPGSLNPEPLPLLQNP
Ga0126376_100786024	3300010359	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNP
Ga0126376_105047423	3300010359	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPD
Ga0126376_128003951	3300010359	Tropical Forest Soil	MRAAVCLLAVLILAAAASAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0126372_107459522	3300010360	Tropical Forest Soil	MRAVVCLLAALFLAAASSAVAQEKHLIDPMLPGSLDPKPLPPLKNP
Ga0126378_101334241	3300010361	Tropical Forest Soil	MRPAARLIFILILAAAGSAAAQEKQSIDPTPPGSLNPEPLPP
Ga0126378_101476884	3300010361	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0126378_107443191	3300010361	Tropical Forest Soil	MRDAARPLAVLILTAAFSAIAQEKHLIDPTPPGSLNPEPLPPLQNPD
Ga0126378_130452781	3300010361	Tropical Forest Soil	VRADVRLFLILSLIFILAIAGSAVAQEKHLIDPTP
Ga0126377_101706624	3300010362	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLENP
Ga0134128_114786161	3300010373	Terrestrial Soil	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPL
Ga0126381_1007252173	3300010376	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPSI
Ga0126381_1010951881	3300010376	Tropical Forest Soil	MHAAARLLAALIFAAAGSVVAQEKHLIDPTLPGSLNPEPLPLL
Ga0126383_129372651	3300010398	Tropical Forest Soil	VQSLMRAVVCLLAVLFLAAATAAVAQQKHVIDPMLPGSLDPKP
Ga0126383_136713611	3300010398	Tropical Forest Soil	MRSAACLLALLILAAPAVAEEKHLIDRTRPGSLNPLPLPPLHNADAPS
Ga0105246_106607461	3300011119	Miscanthus Rhizosphere	MHAAPRLLAVFILAAAGSAVAQEKHLIDPTPPGSLNPE
Ga0153928_10904692	3300012677	Attine Ant Fungus Gardens	MRAAARLVAVFLFALAGPAAAQEKHLIDPTPPGSLNPEPLPPLEHP
Ga0137404_121058982	3300012929	Vadose Zone Soil	MRAVLCLLTVLFLAAASSAVAQEKHLIDPMLPGSLNPKLLPPLKNPDAPSTP
Ga0126375_120817472	3300012948	Tropical Forest Soil	MRAVACLLALLFFADADSAVGQEKNSIDPMLPGSLNPEPLPPLKNPEAPS
Ga0126369_108969711	3300012971	Tropical Forest Soil	LVTRPAARLLAVLILAAASSAVAQEKHLIDPTPPGSLNPEP
Ga0164309_111512191	3300012984	Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLP
Ga0164306_116877391	3300012988	Soil	MRAVVCLLAVLFVAAASSAVAQEKHLIDPMLPGSLNPRPLPPL
Ga0164305_103330183	3300012989	Soil	MRAVVFLLAVLFLAAASSAVAQEKHLIDPMLPGSL
Ga0075343_11270851	3300014317	Natural And Restored Wetlands	MRAVACLLAVFVLAAASSAVAQQKRAIDRMLPGSLDPKPL
Ga0157379_106923791	3300014968	Switchgrass Rhizosphere	MRAIVCLVAVLFLAAASSALAQQKHLIDSMLPGSLNPKPLP
Ga0157376_118168382	3300014969	Miscanthus Rhizosphere	MRVAARVLAIFMVAAAGPALAKKKHLIDPTPPGSLNPIALPPLQ
Ga0132258_126226911	3300015371	Arabidopsis Rhizosphere	MRAAACLLAVFVLVAAGSAAAQEKHLIDPTPPGSLNPKP
Ga0132256_1028953252	3300015372	Arabidopsis Rhizosphere	MRAVAFLLVLHFLAAAGSAVAQEKNLIAPMLPGSLNPKPLPPLKNPEGPS
Ga0182036_112632831	3300016270	Soil	MPAVACLLAVLFLAAASSALAQKKHLIDPMLPGSLNPE
Ga0182032_111272592	3300016357	Soil	MRAAAHLLAFLVLASAGSAVAQEKHLIDPTLPGSL
Ga0182034_110937502	3300016371	Soil	MCAAARLLAILIFVATGPAVAQEKHLIDPTPPGSLNPEP
Ga0182040_108259571	3300016387	Soil	MRAAVCLFAVLFLAGGIFAVAQERHLIDPMRPGSLNPKP
Ga0182037_120915711	3300016404	Soil	MMRAAARLLAAFLVVAAGSAAAQEKHLIDPTPPGSLNPEPLPPL
Ga0182039_117817122	3300016422	Soil	MRAVRCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0182038_106944291	3300016445	Soil	MPAVACLLAVLFLAAASSALAQKKHLIDPMLPGSLN
Ga0187824_102254491	3300017927	Freshwater Sediment	MYTAARLVAVLLFALAGSAAAQEKHLIDPTPPGSLNPEPL
Ga0187781_109238341	3300017972	Tropical Peatland	MRTAARLLAVLILAVAGSAVAQEKHLIDRTRPGSLNPESL
Ga0187777_101350224	3300017974	Tropical Peatland	MHAAACLLAVLILAAAGSAVAQEKHSIDPTPPGSLNPGPLP
Ga0187777_101847773	3300017974	Tropical Peatland	MRAAARLLAVLILAAAGSAAAQEKHLIDPTPPGSLN
Ga0187772_108685542	3300018085	Tropical Peatland	MRTAARLLAALILAVAGSAVAQEKHLIDRTRPGSLNPESL
Ga0210407_109207431	3300020579	Soil	MRAAAHLLAVLLLAAAGSAVARAKHLIDPTPPGSLNPEPP
Ga0210406_103958931	3300021168	Soil	MRAVVCLLAVLFVAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0210406_104169942	3300021168	Soil	MRAAARLLALLMLAAAGSAVAQEKHLIDPTPPGSLNPEPLPRLQNPD
Ga0210405_104960381	3300021171	Soil	MRAVLSLLAILFLAAAGSAIAQEKHLIDPMLPGSLNPKPLPPLTNP
Ga0210389_109517911	3300021404	Soil	MRAVVCLLAVLFLAAASSAVAQEKHVLDPMLPGSL
Ga0210394_112023842	3300021420	Soil	MRAVVCLLVVVFLAAASSAVAQEKHLIDPMLPGSLDPQ
Ga0210402_106089322	3300021478	Soil	MRAAVRLLAVLILAAAGSAVAQEKHLIDPTPPGSLN
Ga0126371_103097954	3300021560	Tropical Forest Soil	MRAVACLLAVLFLAAAGSSVAQEKHSIDPMLPGTLDPKPLPPL
Ga0126371_106358853	3300021560	Tropical Forest Soil	MRSAACLLALLILAAPAVAEEKHLIDRTRPGSLNPL
Ga0222622_108853262	3300022756	Groundwater Sediment	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLN
Ga0207642_103240961	3300025899	Miscanthus Rhizosphere	MRAVVCLLAVLFLAAASSAVVAQEKHLIDPMLPGSLNPKPLPPLKNPDARS
Ga0207693_101107701	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0207662_108493291	3300025918	Switchgrass Rhizosphere	MPAVLCLLAVLFLAAASSVVVAQEKHVIDPMLPGSLD
Ga0207709_108841861	3300025935	Miscanthus Rhizosphere	MRVAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPKALPPLQNPD
Ga0207711_112842662	3300025941	Switchgrass Rhizosphere	MRVAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPIALPPLQNPD
Ga0207641_117078981	3300026088	Switchgrass Rhizosphere	MPAVLCLLAVLFLAAASSVVVAQEKHVIDPMLSGSLDPKPLPPLKNPD
Ga0257147_10200822	3300026475	Soil	MRAPTRLLAVLILTAVGSAVAQEKHLIDPTPPGSLNPKPLPPLQN
Ga0207722_10127761	3300027003	Tropical Forest Soil	MRTAVRLLAVLLLAAAGSAGAQEKHMIDPTPPGSLNPEPLPPLENP
Ga0208042_10630352	3300027568	Peatlands Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLDP
Ga0208324_10995252	3300027604	Peatlands Soil	MRAAAHLLAVLLLAAAGSAVAREKHLIDPAPPGFLNPEPLPPLQNPD
Ga0209178_11600141	3300027725	Agricultural Soil	MRAAARLLTVLILAAAGFAVAQEKHSIDPTPPGSLNLEPLPPL
Ga0208989_100128411	3300027738	Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLAGSLN
Ga0209481_103579581	3300027880	Populus Rhizosphere	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNP
Ga0209526_104231012	3300028047	Forest Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNP
Ga0307302_100404865	3300028814	Soil	MRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSVNPRPCR
Ga0311355_110631561	3300030580	Palsa	MRVVVCLVAILFLSAASSAVAQEKHLIDPMLPGSLDPEPLPPLKNPDAPS
Ga0075386_116305391	3300030916	Soil	MRAPTRLLAVLILAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQNP
Ga0308193_10268592	3300031096	Soil	LLMRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSLNP
Ga0170820_144864521	3300031446	Forest Soil	MRAVVCLLAVLSLAAASSAVAQEKHGIDPMLPGSLNPK
Ga0170820_165866151	3300031446	Forest Soil	MRATVRLLAVLILAAAGSAVAQEKHLIDPTPPGSLNPEP
Ga0170818_1134908852	3300031474	Forest Soil	MRAVLYLLAVFFLAAAGSAIAQEKHLIDPMLPGSLNPEPL
Ga0318516_108077721	3300031543	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPK
Ga0318515_101089221	3300031572	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQ
Ga0310915_103740231	3300031573	Soil	MRTVVCLLAILFLAAASSALAQQKHLLDPMLPGSLDPKPLPPLKNP
Ga0306917_100308991	3300031719	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPAAPSTP
Ga0306917_110670521	3300031719	Soil	MRTVVCLLAVLFLAAASSAVAQQKHLIDPMLPGSL
Ga0307469_117502562	3300031720	Hardwood Forest Soil	MRAVVCLLAVLFVAAAGSAVAQEKHLIDPMLSGSLNPK
Ga0306918_103166731	3300031744	Soil	MMRAAARLLAAFLVVAAGSAAAQEKHLIDPTPPGSL
Ga0318502_110216832	3300031747	Soil	LLMRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPG
Ga0318492_104426362	3300031748	Soil	MRTAARLLAVLLLAAAGSAGAQEKHMIDPTPPGSLN
Ga0318494_103605451	3300031751	Soil	MRAVAPLLAVFLLAAGSAGAQEKHLTDPTPPGSLNPEPLPALQHPDA
Ga0318535_104610692	3300031764	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNP
Ga0318509_102593551	3300031768	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLN
Ga0318566_106571771	3300031779	Soil	MRAVLCLLVVLFLAATGSAIAQEKHSIDPMLPGSLNPKPLPPLKN
Ga0318552_102314011	3300031782	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0318552_102581371	3300031782	Soil	LLVRAVRCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNP
Ga0318550_102842041	3300031797	Soil	MHAAARFIAIALIALAGSAAAQQKPEIDPTPPGSLNPEPLPLLEYRDAK
Ga0318568_105276961	3300031819	Soil	MRAVLCLLAALFLAAANSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0310917_111128971	3300031833	Soil	MRAAARLLAVLMLVTTGSAAAQEKHLIDRTRPGSLDPKPLPPLQNPDAP
Ga0310907_104717612	3300031847	Soil	MRAAARLLAVVILAAAGSAVAQEKHLIDPTPPGSLNPKPLPPLQN
Ga0306919_112191652	3300031879	Soil	MCAVVCLVAGLFLTAASSAIAQEKHLIDPMLPGSLNPKPLPPLKNPDAA
Ga0318551_100891201	3300031896	Soil	MRAVVCLVAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPS
Ga0306923_112608711	3300031910	Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPSI
Ga0310912_100511045	3300031941	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSL
Ga0310910_108280332	3300031946	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNPDA
Ga0318531_103984451	3300031981	Soil	MRAVICLLAVLFPAIASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAQSIPAK
Ga0310903_103187142	3300032000	Soil	MRAVVCLLAVLFSAATSSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0318569_105692551	3300032010	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPE
Ga0318507_104390581	3300032025	Soil	MRAVVCLLAVLFLAVASSAVAKEKHLIDPMLPGSLNPKPLPPLKNPA
Ga0318556_101317042	3300032043	Soil	MRAAACLLTVFVFAAAGSAVAQEKHLIDPTPPGSLNPEPLPP
Ga0318533_103357442	3300032059	Soil	MRAAPCLLAVLILAAAGSAVAQEKHLIDPTPPGSLN
Ga0318505_100038951	3300032060	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQN
Ga0306924_124163402	3300032076	Soil	MRAVLCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNPKPLPP
Ga0306920_1008721091	3300032261	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNPDAAAD
Ga0306920_1034239341	3300032261	Soil	MRTVVCLLAVLFLSAASSAVAQQKHLIDPMLPGSLTPKPLPSLKIPDAPATPAQE
Ga0335084_108007473	3300033004	Soil	MRAAPCLLAVLLLAAAGSAVAQEKHLIDPILPGSLNPK
Ga0310914_104881931	3300033289	Soil	MRTAARLLAALLLAAAGSAGAQEKHMIDPTPPGSLNP
Ga0310914_109705641	3300033289	Soil	MHAAARFIAIALIALAGSAAAQQKPEIDPTPPGSLNPEPLPLLE
Ga0318519_107973961	3300033290	Soil	MRAAARLLAILILAAASSAVAQQKHLIDPTPRGSLNPVPLP
Ga0326726_104682213	3300033433	Peat Soil	MRAVACLLAVLFLAGSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPST