Metagenome / Metatranscriptome Family F045288

Basic Information
Family ID	F045288
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	45 residues
Representative Sequence	MIQIKDVTKLYPAKEAGNGAGKDNGAIHALDHISLHVTPGEW
Number of Associated Samples	139
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.69 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	83.01 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (98.693 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.497 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.209 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82 1AP72_2010_repI_A01DRAFT_10072423 2JGI1027J12803_1016650881 3JGI12269J14319_101995602 4JGI12627J18819_102260452 5Ga0062389_1002421071 6Ga0063455_1003851841 7Ga0066395_108317672 8Ga0070709_103163991 9Ga0070709_110643531 10Ga0070710_103746471 11Ga0070732_104392691 12Ga0070732_108650661 13Ga0070761_110962782 14Ga0066706_100754593 15Ga0070763_102811222 16Ga0070764_110466241 17Ga0070717_101157411 18Ga0075019_104682541 19Ga0075014_1001280112 20Ga0066665_100882961 21Ga0079221_109082331 22Ga0066793_107326973 23Ga0099827_118652661 24Ga0105241_115524491 25Ga0116221_13956961 26Ga0116127_11755891 27Ga0116134_11562161 28Ga0116223_100442561 29Ga0126379_111277652 30Ga0136449_1001105757 31Ga0126361_110573402 32Ga0126356_107359992 33Ga0137384_100743424 34Ga0137361_117409161 35Ga0137398_106335452 36Ga0137394_112981012 37Ga0137419_108059183 38Ga0164302_119367212 39Ga0126369_100755131 40Ga0134087_106072321 41Ga0164304_114793421 42Ga0164307_110967891 43Ga0182019_101250314 44Ga0182039_113379851 45Ga0182038_119462061 46Ga0187802_103448351 47Ga0187801_104763501 48Ga0187853_104305381 49Ga0187808_102945142 50Ga0187879_105459651 51Ga0187781_108866711 52Ga0187781_113161991 53Ga0187777_108305772 54Ga0187804_102207941 55Ga0187851_107370691 56Ga0187772_100969723 57Ga0187769_109626041 58Ga0187771_115243671 59Ga0182031_13664261 60Ga0179594_104035942 61Ga0210403_100462121 62Ga0210403_107067361 63Ga0210399_107625911 64Ga0210400_102842891 65Ga0210405_107030091 66Ga0210408_104614561 67Ga0210389_106551652 68Ga0210391_113562381 69Ga0210390_104425462 70Ga0210390_108333431 71Ga0210398_107723251 72Ga0126371_128939822 73Ga0213851_16294221 74Ga0213853_100956121 75Ga0213853_107378591 76Ga0224569_1026992 77Ga0224571_1003293 78Ga0224556_11434802 79Ga0208194_10011531 80Ga0207654_109909202 81Ga0179587_104488481 82Ga0208236_10148002 83Ga0209419_10775982 84Ga0209008_10068454 85Ga0209527_10042616 86Ga0209009_11238382 87Ga0208696_12360862 88Ga0209038_102457021 89Ga0209060_102778091 90Ga0209274_107319942 91Ga0209517_100608164 92Ga0209275_101565561 93Ga0209380_100841313 94Ga0209380_104806692 95Ga0209624_100545213 96Ga0209067_104475602 97Ga0209006_103024771 98Ga0209526_108982692 99Ga0137415_113010201 100Ga0302231_104874092 101Ga0265338_100184312 102Ga0302221_101100342 103Ga0302199_10887342 104Ga0302278_101770531 105Ga0308309_107979372 106Ga0311368_106865401 107Ga0311329_102355803 108Ga0311326_103182741 109Ga0311330_108632212 110Ga0302188_104255302 111Ga0311339_112724021 112Ga0302306_100885152 113Ga0302181_103715541 114Ga0302181_104171781 115Ga0311372_118504642 116Ga0311355_102240173 117Ga0311356_105190931 118Ga0316363_100284354 119Ga0265459_129748672 120Ga0265459_142308061 121Ga0265745_10094701 122Ga0265741_1037321 123Ga0265765_10705341 124Ga0307498_103448751 125Ga0307500_100087531 126Ga0302307_101308842 127Ga0265340_104663621 128Ga0310686_1053153391 129Ga0310686_1165587591 130Ga0307476_103794152 131Ga0307476_107357611 132Ga0306917_112445321 133Ga0307475_102477843 134Ga0307475_108238431 135Ga0307475_115276332 136Ga0307478_102462672 137Ga0302315_105065772 138Ga0306926_100665103 139Ga0307479_119915932 140Ga0306924_102055281 141Ga0311301_100699447 142Ga0307470_106116182 143Ga0348332_143701641 144Ga0335085_101359954 145Ga0335078_100665316 146Ga0335078_103877762 147Ga0335080_110544032 148Ga0335081_101795891 149Ga0335069_120017591 150Ga0335084_121106562 151Ga0310810_109984402 152Ga0316212_10235162 153Ga0314866_026429_756_875
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82 1AP72_2010_repI_A01DRAFT_10072423 2JGI1027J12803_1016650881 3JGI12269J14319_101995602 4Ga0063455_1003851841 5Ga0066395_108317672 6Ga0070709_110643531 7Ga0070732_104392691 8Ga0070732_108650661 9Ga0070761_110962782 10Ga0066706_100754593 11Ga0070763_102811222 12Ga0070717_101157411 13Ga0066665_100882961 14Ga0099827_118652661 15Ga0116134_11562161 16Ga0116223_100442561 17Ga0126379_111277652 18Ga0126361_110573402 19Ga0126356_107359992 20Ga0137398_106335452 21Ga0137394_112981012 22Ga0137419_108059183 23Ga0164307_110967891 24Ga0182038_119462061 25Ga0187808_102945142 26Ga0187879_105459651 27Ga0187781_113161991 28Ga0187772_100969723 29Ga0187769_109626041 30Ga0187771_115243671 31Ga0179594_104035942 32Ga0210403_100462121 33Ga0210403_107067361 34Ga0210399_107625911 35Ga0210400_102842891 36Ga0210405_107030091 37Ga0210390_108333431 38Ga0126371_128939822 39Ga0213853_100956121 40Ga0224556_11434802 41Ga0208236_10148002 42Ga0209008_10068454 43Ga0209275_101565561 44Ga0209380_100841313 45Ga0137415_113010201 46Ga0302199_10887342 47Ga0308309_107979372 48Ga0311330_108632212 49Ga0311355_102240173 50Ga0316363_100284354 51Ga0265459_129748672 52Ga0265459_142308061 53Ga0307475_108238431 54Ga0307475_115276332 55Ga0307478_102462672 56Ga0335078_103877762 57Ga0335069_120017591
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0164304_114793421 2JGI12269J14319_101995602 3Ga0062389_1002421071 4Ga0063455_1003851841 5Ga0070709_110643531 6Ga0070732_104392691 7Ga0070764_110466241 8Ga0070717_101157411 9Ga0075019_104682541 10Ga0066665_100882961 11Ga0099827_118652661 12Ga0116221_13956961 13Ga0116223_100442561 14Ga0126379_111277652 15Ga0126361_110573402 16Ga0137361_117409161 17Ga0137394_112981012 18Ga0137419_108059183 19Ga0126369_100755131 20Ga0134087_106072321 21Ga0164307_110967891 22Ga0182019_101250314 23Ga0187802_103448351 24Ga0187781_113161991 25Ga0187777_108305772 26Ga0187804_102207941 27Ga0179594_104035942 28Ga0210403_100462121 29Ga0210403_107067361 30Ga0210400_102842891 31Ga0210405_107030091 32Ga0210390_104425462 33Ga0210398_107723251 34Ga0126371_128939822 35Ga0213851_16294221 36Ga0213853_100956121 37Ga0224569_1026992 38Ga0208194_10011531 39Ga0179587_104488481 40Ga0209008_10068454 41Ga0208696_12360862 42Ga0209274_107319942 43Ga0209380_100841313 44Ga0209526_108982692 45Ga0302221_101100342 46Ga0308309_107979372 47Ga0311326_103182741 48Ga0311330_108632212 49Ga0302188_104255302 50Ga0302306_100885152 51Ga0302181_103715541 52Ga0265459_129748672 53Ga0265459_142308061 54Ga0265741_1037321 55Ga0302307_101308842 56Ga0310686_1053153391 57Ga0307478_102462672 58Ga0311301_100699447 59Ga0348332_143701641 60Ga0310810_109984402 61Ga0316212_10235162
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF02687	FtsX	88.24
PF10080	FtrD-like	3.92
PF12704	MacB_PCD	2.61
PF00005	ABC_tran	1.31
PF05649	Peptidase_M13_N	0.65
PF01229	Glyco_hydro_39	0.65
PF01177	Asp_Glu_race	0.65
PF12680	SnoaL_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG3664	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.65

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	92.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %
Unclassified	root	N/A	1.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	20.26 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	15.69 %
Unclassified	root	N/A	1.31 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1007242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1908	Open in IMG/M
3300000955\|JGI1027J12803_101665088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1454	Open in IMG/M
3300001356\|JGI12269J14319_10199560	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300001867\|JGI12627J18819_10226045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	754	Open in IMG/M
3300004092\|Ga0062389_100242107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1820	Open in IMG/M
3300004153\|Ga0063455_100385184	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300004633\|Ga0066395_10831767	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005434\|Ga0070709_10316399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1144	Open in IMG/M
3300005434\|Ga0070709_11064353	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005437\|Ga0070710_10374647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	948	Open in IMG/M

Showing 1 to 10 of 153 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.42%
Host-Associated	Host-Associated	4.58%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	11.76%
Plants	Host-Associated → Plants	4.58%
Terrestrial	Environmental → Terrestrial	83.66%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	9.80%
Peat	Environmental → Terrestrial → Peat	12.42%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Roots	Host-Associated → Plants → Roots	0.65%
Sediment	Environmental → Aquatic → Sediment	1.96%
Soil	Environmental → Terrestrial → Soil	70.59%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	15.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.84%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.31%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.31%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.23%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.31%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M

Showing 1 to 10 of 139 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10072423	3300000579	Forest Soil	MIQIKDVTKLYPAKQVGNGSGKEAGNGAIHALDHISLHVTPGEWL
JGI1027J12803_1016650881	3300000955	Soil	MIQIKDVTKLYPAKEAGNGAGKDNANGAIHALDHISLHVAAGEWLSIMGP
JGI12269J14319_101995602	3300001356	Peatlands Soil	MIQIKNVTKLYPAKAAGNENANAKGDQNGAGVIRALDHISLLVAQGEWLSIMGPS
JGI12627J18819_102260452	3300001867	Forest Soil	MIQIKDVTKLYPAKEAGNGSAKDAGNGAIHALDHISLHVTPGEWLSIM
Ga0062389_1002421071	3300004092	Bog Forest Soil	MIEIKNVTKLYPAKAAGNENANGNGGRDGAIHALDDISLHVAQGEWLSIMGP
Ga0063455_1003851841	3300004153	Soil	MIQIKDVTKLYPAKAAGNGSGKDNGAGSIHALDHISLHVAAGEWLS
Ga0066395_108317672	3300004633	Tropical Forest Soil	MIQIKDVTKLYPAKEAGNGTGKDAVNGTANIHALDHISLH
Ga0070709_103163991	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIHIKDVTKLYPAKEAGNGLGKDNGNGAIHALDHISLHVTPGEWLSIM
Ga0070709_110643531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIQIKDVTKLYPAKESGDRENSSIHALDHISLHVTAGEWLSIMGPSGS
Ga0070710_103746471	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIQIKNVTKLYPAKEAGNGSGKDNGAIHALDHISLHVTPGEWLSIMGPSGS
Ga0070732_104392691	3300005542	Surface Soil	MIQIKNVTKLYPAKESGKGVGKEEGSIHALDHISLHVQLGEWLS
Ga0070732_108650661	3300005542	Surface Soil	MIQIKNVTKLYPAKESGDGAGKDSANGAIHALDHISLH
Ga0070761_110962782	3300005591	Soil	MIQINNVTKLYPAKEAGNGSGNPKDGPGKDASIHALDHISLHVAAGEWLSIMGPSGSG
Ga0066706_100754593	3300005598	Soil	MIEIKDVTKLYPAKEAGNGSASAAGNGKESGSIHALDHISLHV
Ga0070763_102811222	3300005610	Soil	MIQINDVTKLYPTKEAAVLSGGKDNASIHALDHISL
Ga0070764_110466241	3300005712	Soil	MIQIKDVTKLYPAKAAGDENANPKGEQNGAIHALDHISLNVARGEWLSIMGPS
Ga0070717_101157411	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIQIKDVTKLYPAKEAGNESANGDGKIDGKASGKERESGAIHALDHISLHVGAGEW
Ga0075019_104682541	3300006086	Watersheds	MIEIKDVTKLYPAKEAGNGTGKDNGAGSIHALDHISLHVAQGE
Ga0075014_1001280112	3300006174	Watersheds	MIQIKDVIKLYPAKEAGNGAGGSGSDNGSIHALDHISLHVAQGEWLSIM
Ga0066665_100882961	3300006796	Soil	MIQIKNVTKLYPAKAAEIGSGNGNATSSSGVIRALDDISLRVVPGEW
Ga0079221_109082331	3300006804	Agricultural Soil	MIQIKDVTKLYPAKEAGNGSGKDNGDGAIHALDHISLHVTPGEWLSIM
Ga0066793_107326973	3300009029	Prmafrost Soil	MIQIKDVTKLYPAKEAGNGNGSGKDNGSGSIHALDHISLHVTQGEWLSIMGPSGSG
Ga0099827_118652661	3300009090	Vadose Zone Soil	MIQIKNVTKLYPAKASGETANGKGDQSGAIHALDHISLHVA
Ga0105241_115524491	3300009174	Corn Rhizosphere	MIQIKDVTKLYPAKEAGNGAGKDSSSIHALDHISLHVAAGEWLSIMGPSGS
Ga0116221_13956961	3300009523	Peatlands Soil	MIQIKDVTKLYPAKEAGNGNGSGKDNGSSSIHALDHISLHVAPGEWLSIMGPSG
Ga0116127_11755891	3300009618	Peatland	MIEIKDVTKLYPAKAAGNENGNGKENQNGAIHALDHISLHVAQGEWLSIMGP
Ga0116134_11562161	3300009764	Peatland	MIQIKDVTKLYPAKAAGNEKGSGNGGRNSKDKENGAIHALDHISLHVSQ
Ga0116223_100442561	3300009839	Peatlands Soil	MIQIKNVTKLYPAKEAGNGSGNGGGKENGSIHALDHIALQVTPGEWLSIMG
Ga0126379_111277652	3300010366	Tropical Forest Soil	MIQIKDVSKRYPAKKARSGMGKDSGNGAIHGLDHIS
Ga0136449_1001105757	3300010379	Peatlands Soil	MIEIKDVTKLYPAKAAGNENGNGKENQNGAIHALDHISLHVAQGEWLSIMGPSG
Ga0126361_110573402	3300010876	Boreal Forest Soil	MIQINDVTKLYPSQGAGQDGASGNESKGDAIHALDHISLQV
Ga0126356_107359992	3300010877	Boreal Forest Soil	MIQIKDVTKLYPAKAAGNENGNESQSSAIHALDHISLHVAQD
Ga0137384_100743424	3300012357	Vadose Zone Soil	MIQIKDVTKLYPAKEAGNGSGKDASSGSIHALDHISL
Ga0137361_117409161	3300012362	Vadose Zone Soil	MIEIRDVTKLYPAKEAGDGSASAAGNGRDSGSIHALDHISLHVAAGE
Ga0137398_106335452	3300012683	Vadose Zone Soil	MIQIKDVTKLYPAKAAGNENGKESQSSAIHALDHISLHVAQGEWLSIMGPSGSGK*
Ga0137394_112981012	3300012922	Vadose Zone Soil	MIEIKDVTKLYPAKESGNGSVSAADNGRESSSIHALDHISLHVAAG*
Ga0137419_108059183	3300012925	Vadose Zone Soil	MIEIKDVTKLYPAKESGDAGASVAGNGKESGSIHALDHIS
Ga0164302_119367212	3300012961	Soil	MIQIKNVTKLYPAKEAGNGSGKDDGSIHALDHINLHV
Ga0126369_100755131	3300012971	Tropical Forest Soil	MIQIKDVIKLYPAKEAGSGMGKDSGNGAIHALDHISLHVAKGEWLS
Ga0134087_106072321	3300012977	Grasslands Soil	MIQIKDVTKLYPAKEAGNGTGKDNAAIHALDHISLHVAA
Ga0164304_114793421	3300012986	Soil	MIQIKDVTKLYPAKEAGNGAGKDNGAIHALDHISLHVTPGEW
Ga0164307_110967891	3300012987	Soil	MIQIKDVTKLYPAKEAGNGGARDPGAIHALDHISLHVASG
Ga0182019_101250314	3300014498	Fen	MIQIKDVIRLYPAKESNNGSGKDKDKDSSIHALDHISLHVAQGEWLSIMGPS
Ga0182039_113379851	3300016422	Soil	MIQIKNVTKLYPAKESGNGAKDNNGNGAIHALDHINLHVVPGEW
Ga0182038_119462061	3300016445	Soil	MIQIKDVTKLYPAKEAGSAKENGSSAIHALDHISLHVTPGE
Ga0187802_103448351	3300017822	Freshwater Sediment	MIQIKDVTKLYPAKEAANGGNGSAKESASIHALDHISLHVTKGEWLSIMGPS
Ga0187801_104763501	3300017933	Freshwater Sediment	MIQIKDVTKLYPAKEAGNGSGKENGLIHALDHISLHVEAGEWLSIMGPSG
Ga0187853_104305381	3300017940	Peatland	MIQIKDVTKLYPAKAAGNENGNGKENQNGAIHALDHISLHV
Ga0187808_102945142	3300017942	Freshwater Sediment	MIQIKDVTKLYPAKAAGNENGSGKENGNGAIHALDHISL
Ga0187879_105459651	3300017946	Peatland	MIQIKDVTKLYPAKEAGNGKGSGKDDASGFISALD
Ga0187781_108866711	3300017972	Tropical Peatland	MIQIKNVTKLYPAKEEGNGNGAGRGNGAIHALDHISLHVTKGEW
Ga0187781_113161991	3300017972	Tropical Peatland	VTKLYPANEAAGAEAAGKVKESSAIHALDHISLHVTPGEWLSIMGPSGSG
Ga0187777_108305772	3300017974	Tropical Peatland	MIQINNVTKLYPAKEAGDASGKDNGAIHALDHISLHVVSGEWLSIMG
Ga0187804_102207941	3300018006	Freshwater Sediment	MIQIKDVTKLYPAKEAGNGSGKENGSIHALDHISLQVEAGEWLSIMGPSGS
Ga0187851_107370691	3300018046	Peatland	MIQINDVTKLYPAKEAGNGSGKDNGASSIHALDHISLH
Ga0187772_100969723	3300018085	Tropical Peatland	MIQIKDVTKLYPAKAAGNESANGNGGGNGKDNGAIR
Ga0187769_109626041	3300018086	Tropical Peatland	MIQIKNVTKLYPAKEVGNGNGSGKDNGMIHALDHISLHVT
Ga0187771_115243671	3300018088	Tropical Peatland	MIEIKNVTKLYPAKEAGNGNGSGKDNGSIHALDHIS
Ga0182031_13664261	3300019787	Bog	MIQIKNVTKLYPAKAAGNEKDNAKGNQNSAIHALDHISLHVAQGEWLSIMGPSGRVNRRW
Ga0179594_104035942	3300020170	Vadose Zone Soil	MIEITNVAKLYPAKELGNERGNGAGKESGSIHALDHISLHVAPG
Ga0210403_100462121	3300020580	Soil	MIQIKDVTKLYPAKESAAAGGGKDNASIHALDHISLHVAAGE
Ga0210403_107067361	3300020580	Soil	MIQIKDVTKLYPAKQSGDGPAKDVASSIHALDHISLHV
Ga0210399_107625911	3300020581	Soil	MIRIKDVTKLYSAKGAGNEDSNVKESQSGAIHALDRISLDVA
Ga0210400_102842891	3300021170	Soil	MIQIKNVTKLYPAKEAGGVNGAAGSSSIHALEQISLHVAAGEWLSIMG
Ga0210405_107030091	3300021171	Soil	MIQIKDVTKLYPAKEAGTGKGSGKDERSAKDEDSGFIRALDHISLHVTQGEWLSIMGPSGSGK
Ga0210408_104614561	3300021178	Soil	MIQIKDVTKIYPAKETGNGSGKDNIHALDHISLHVAQGEWLSIM
Ga0210389_106551652	3300021404	Soil	MIQIKGVTKLYPAKAAGDENANPKGEQNGVIHALDHISLNVARGEWLSIMGPS
Ga0210391_113562381	3300021433	Soil	MIQIKDVTKLYPAKEAGDGKDGGSGFISALDHISLHVTQGEWLSIMGPSGS
Ga0210390_104425462	3300021474	Soil	MIQIKNVTKLYPAKAAGNGTGKDNGASSIHALDHISLHVRPGE
Ga0210390_108333431	3300021474	Soil	MIQIKDVTKLYPAQESGNGTGKDNSASSIHALDHISLHVAQGEWLSIM
Ga0210398_107723251	3300021477	Soil	MIQIKDVTKLYPAKAAGNEAANGGRNGKESGAIHALDHISLHVS
Ga0126371_128939822	3300021560	Tropical Forest Soil	MIQIKDVTKLYPAKEAADGGSQPGSGKDNGVIHALDHISLHVTVGEWLSI
Ga0213851_16294221	3300021860	Watersheds	MIQIKDVIKLYPAKEAGSGAGGSGSDNGSIHALDHISLHVAQGEWLSIMGPSGS
Ga0213853_100956121	3300021861	Watersheds	MIEIKDVTKLYPAKESGNGSGTNKDNGSIHALDHISLHV
Ga0213853_107378591	3300021861	Watersheds	MIQIKDVTKLYPAKEAGSGNGSGKDNSSIHALDHISLHVTAGEWLS
Ga0224569_1026992	3300022732	Rhizosphere	MIQINNVTKLYPSQGAGQENASGKESPKGAIHALDHISLHVAQGEWLSIMGPSGSG
Ga0224571_1003293	3300022734	Rhizosphere	MIQINNVTKLYPSQGAGQENASGKESPKGAIHALDHISLHVAQG
Ga0224556_11434802	3300024295	Soil	MIQIKNVTKLYPAKAAGNENENGKGNQNGAINALD
Ga0208194_10011531	3300025412	Peatland	MIQIKDVTKLYPAKAAGNPTSPGQNGAIHALDHISLHVAQGEWLSIMGPSGS
Ga0207654_109909202	3300025911	Corn Rhizosphere	MIQIKDVTKLYPAKEAGNGTGKDNAAIHALDHISLHVAAGEWLSIM
Ga0179587_104488481	3300026557	Vadose Zone Soil	MIQIKDVTKLYPAKAAGNENSKESQSSAIHALDHISLHVAQGEWLSIMGP
Ga0208236_10148002	3300027066	Forest Soil	MIEIKNATKLYPAKESRAAKDLAASIHALDHISLNVAP
Ga0209419_10775982	3300027537	Forest Soil	MIQIKDVTKLYPAKEAGNGAGKDASSSSIHALDHISLHVTQGEW
Ga0209008_10068454	3300027545	Forest Soil	MIEIKDVTKLYPSQGAGQESANGKEHQSAAIHALDHISLRVLAGEWLS
Ga0209527_10042616	3300027583	Forest Soil	MIQIKNVTKLYPAKAADIGSGNGNASSSSGVIRALDDISLHVEPGEWLSIMGPSGS
Ga0209009_11238382	3300027667	Forest Soil	MIQIKDVTKLYPAKEAGNGTGKDSSVHALDHISLH
Ga0208696_12360862	3300027696	Peatlands Soil	MIQIKNVTKLYPAKESGNGNGAGKDNGSIHALDHISLHVTQGEWLSIMGP
Ga0209038_102457021	3300027737	Bog Forest Soil	MIQIKDVTKLYPAKAAGNEKGNDSSIHALDHISLHVAKGEWLSIMGPSG
Ga0209060_102778091	3300027826	Surface Soil	MIQIKDVTKLYPAKESGNGTGKDSGAIHALDHISLH
Ga0209274_107319942	3300027853	Soil	MIQINNVTKLYPAKEAGNGSGNPKDGPGKDASIHALDHISLHVAAGEWLSIMGPSGSGK
Ga0209517_100608164	3300027854	Peatlands Soil	MIQIKNVTKLYPAKEAGNGNGSGKDNGAIHALDHISLHVTKGEWLSIMGP
Ga0209275_101565561	3300027884	Soil	MIQIKDVTKLYPAKEAGDGKDGGSGFISALDHISLHVTQ
Ga0209380_100841313	3300027889	Soil	MIEIKNVTKLYPAQAAGNEPAKGEQSGTIHALDDISLH
Ga0209380_104806692	3300027889	Soil	MIQIKNVTKLYPAKAAGNGTGKDNGASSIHALDHISLH
Ga0209624_100545213	3300027895	Forest Soil	MIQIKDVTKLYPSQGAGQESANGKENQSPAIHALDHISL
Ga0209067_104475602	3300027898	Watersheds	MIQIKDVTKLYPAKESGNGTGKDNSASSIHALDHISLN
Ga0209006_103024771	3300027908	Forest Soil	MIQIKDVTKLYPAKESGNGPGKDKDKDGASIHALDHISLHV
Ga0209526_108982692	3300028047	Forest Soil	MIQIKDVTKLYPAKESGNENAGGKEKESGAIHALDHISLDVAPGEWLSIMG
Ga0137415_113010201	3300028536	Vadose Zone Soil	MIQIKDVTKLYPAKESGKESAKGGGKENAKESGAIHALDH
Ga0302231_104874092	3300028775	Palsa	MIQINNVTKLYPSQGAGQESANGKESQNDAIHALDRISLHVAQGEWLSIMGPSGSGK
Ga0265338_100184312	3300028800	Rhizosphere	MIQIKDVTKLYPAKETGNGSGKDNIHALDHISLHVTQGEWLSIMGP
Ga0302221_101100342	3300028806	Palsa	MIQIKNVTKLYPSKAAGNETAAGKENQNSSIHALDH
Ga0302199_10887342	3300028860	Bog	MIQIKDVTKLYPAKGAGKEPAGENPGKENGSIHALDHISLHVAKGE
Ga0302278_101770531	3300028866	Bog	MIQIKDVTKLYPAKAAGNGNGKAEQNSSIHALDHISLHVAQGEWLSIMGPSGSG
Ga0308309_107979372	3300028906	Soil	MIQIKDVTKLYPAKESGPAGGSGEDNGSGFIHALDHI
Ga0311368_106865401	3300029882	Palsa	MIEIKNVTKLYPAKAAGNEGANGAGNQSGAIHALD
Ga0311329_102355803	3300029907	Bog	MIQIKNVTKLYPAKAAGNEKDNGKGNQNSAIHALDHISLHVAQG
Ga0311326_103182741	3300029917	Bog	MIQIKNVSKLYPAKAAGNENASGKESQNGAIHALDHISLHVAQGEWLSIMGPSGSG
Ga0311330_108632212	3300029945	Bog	MIQIKNVTKLYPAKAAGNEKDNGKGNQNSAIHALDHISLHVAQGEWL
Ga0302188_104255302	3300029986	Bog	MIQIKDVTKLYPAKGAGKEPAGENPGKENGSIHALDHISLHVAKGEWLSIMGP
Ga0311339_112724021	3300029999	Palsa	MIQIKNVSKLYPAKAAGNENASGKESQNGAIHALDHISLHVAQGEWLSIMG
Ga0302306_100885152	3300030043	Palsa	MIQIKDVTKLYPAKETGNGSGKDATSIHALDDISLHVAAGEWLSIMGPSGS
Ga0302181_103715541	3300030056	Palsa	MIQINNVTKLYPSQGAGQESANGKESQNDAIHALDRISLH
Ga0302181_104171781	3300030056	Palsa	MIQIKNVTKLYPAKAAGNENASGKENQNGAIHALDHISLHVAQ
Ga0311372_118504642	3300030520	Palsa	MIQIKNVTKLYPAKAAGNENASGKENQNGAIHALDHISLHVAQGEWLSIMGPSGSG
Ga0311355_102240173	3300030580	Palsa	MIQINNVTKLYPSQGAGQESANGKESQNDAIHALDRISLHVAQGEWLSIMGPSG
Ga0311356_105190931	3300030617	Palsa	MIEIKNVTKLYPAKAAGNESATGPGNQNGAIHALDHISLHVAQGEWLSIMGPSGSG
Ga0316363_100284354	3300030659	Peatlands Soil	MIQIKNVTKLYPAKEAGNGSGNGGGKENGSIHALDH
Ga0265459_129748672	3300030741	Soil	VIRIEDVTKLYPAKAGGSENANAKENQSSAIHALDHISLHVAPGE
Ga0265459_142308061	3300030741	Soil	MIEIKDATKLYPAKESRAARDSAASIHALDHISLDVAPGEWVSIMGPS
Ga0265745_10094701	3300030759	Soil	MIQIKGVTKLYPAKAAGDENANGKGEQNGVIHALDHISLN
Ga0265741_1037321	3300030814	Soil	MIQINDVTKLYPAKEAAIASGGKDNASIHALDHITLHV
Ga0265765_10705341	3300030879	Soil	MIQIKDVTKLYPAKAAGNESANGKGEQNGAIHALDHISLDVARGEWLSIMGP
Ga0307498_103448751	3300031170	Soil	MIQIKDVTKLYPAKEVGNGSGKDNASIHALDHISL
Ga0307500_100087531	3300031198	Soil	MIQIKGVTKLYPAKEAGNGTGKDNGSGSIHALDHISLHVAQGEWLSI
Ga0302307_101308842	3300031233	Palsa	MIQINDVTKLYPAKETASTGAKDNASIHALDHISLHVAAGEWLSIMGPS
Ga0265340_104663621	3300031247	Rhizosphere	MIQIKDVTKLYPAKETGNGSGKDNIHALDHISLHVTQGEWLSI
Ga0310686_1053153391	3300031708	Soil	MIEIKNVTKLYPAKAAGNEHAKGMGAQSGAIHALDDISLQVAQG
Ga0310686_1165587591	3300031708	Soil	MIQIKEVTKLYPAKAGENENASGKEGQNGAIHALDHISLHVAQGEW
Ga0307476_103794152	3300031715	Hardwood Forest Soil	MIQIKDVTKLYPAKAAGDENANGKGEQNGAIHALDHISLRVAQGEWLSIMGP
Ga0307476_107357611	3300031715	Hardwood Forest Soil	MIQIKDVTKLYPAKAAGNENGKDSQSGAIHALDHISL
Ga0306917_112445321	3300031719	Soil	MIQIKNVTKLYPAKESGNGAKDNNGNGAIHALDHINLHVV
Ga0307475_102477843	3300031754	Hardwood Forest Soil	MIQIKDVTKLYPAKESGNGTGKDNGAGSIHALDHISLH
Ga0307475_108238431	3300031754	Hardwood Forest Soil	MIQIKDVTKLYPAREAGNERGDGKESQNAVIHALD
Ga0307475_115276332	3300031754	Hardwood Forest Soil	MIQIKDVTKLYPAKEVENASGNGAGKDSGSIHALDHISLHVAP
Ga0307478_102462672	3300031823	Hardwood Forest Soil	MIEIKDITKLYPAKEAGDRADGSGRDSGSIHALDHISLHVALGEWLSIMGPSGSG
Ga0302315_105065772	3300031837	Palsa	MIQIKNVSKLYPAKAAGNENASGKENQNGAIHALDHISLHVAQG
Ga0306926_100665103	3300031954	Soil	MIQIKDVTKLYPAKEAGDGSAKDAGNGAIHALDHISLHVTPGEWL
Ga0307479_119915932	3300031962	Hardwood Forest Soil	MIQIKNVTKLYPAKAAEIASGNGNAASSSGVIRALDDISLHVVPGEWLSIMGPSGSGK
Ga0306924_102055281	3300032076	Soil	MIQIKDVTKLYPAKEAGDGSAKDAGNGAIHALDHISLHVTPGEW
Ga0311301_100699447	3300032160	Peatlands Soil	MIQIKNVTKLYPAKAAENDSANGNGSQNGAIHALDHISLHVAQG
Ga0307470_106116182	3300032174	Hardwood Forest Soil	MIQIKDVTKLYPAKAAGNENGKESQSSAIHALDHIS
Ga0348332_143701641	3300032515	Plant Litter	MIRIKDVTKLYPAKGAGNENSNVKESQSGAIHALDHISLDVAP
Ga0335085_101359954	3300032770	Soil	MIQIKNVTKLYPAKEAGYGSGKDNGNGAIHALDHINLHVTPGEWLS
Ga0335078_100665316	3300032805	Soil	MIQIKNVTKLYPAKEAGNGAGKENNGAIHALDHISLHVTAGEWLS
Ga0335078_103877762	3300032805	Soil	MIQIKNVTKLYPAKESGNGSGKDNGAIHALDHISLHVTPGEWLSIMGPPAQGNRRWSI
Ga0335080_110544032	3300032828	Soil	MIQIKNVTKLYPAKEAGNGTGKDNGNGAIHALDHINLH
Ga0335081_101795891	3300032892	Soil	MIQIKNVTKLYPAKEAGNGTGKDNGNGAIHALDHISLHVTAGEWLSIMGPSGS
Ga0335069_120017591	3300032893	Soil	MIQIKNVTKLYPAKASGNGAGKDNGSIHALDHISLHVT
Ga0335084_121106562	3300033004	Soil	MIQIKDVTKLYPAKASGNGSGKDNGGGSIHALDHISLHVTAGE
Ga0310810_109984402	3300033412	Soil	MIQIKDVTKLYPAKEIDGPGKESGAIHALDHISLHVAPGEWLSIMGPSGS
Ga0316212_10235162	3300033547	Roots	MIQIKDVTKRYPAQETGNGKDGGSGFISALDHISL
Ga0314866_026429_756_875	3300033807	Peatland	MIQIKNVTKLYPAKEAGNGTGKDNGAIHALDHISLHVTKG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045288

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences