NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045279

Metagenome / Metatranscriptome Family F045279

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045279
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 52 residues
Representative Sequence TVALARIYVALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSALR
Number of Associated Samples 139
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 7.19 %
% of genes from short scaffolds (< 2000 bps) 7.84 %
Associated GOLD sequencing projects 130
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (92.810 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(20.261 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.980 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.91%    β-sheet: 0.00%    Coil/Unstructured: 53.09%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF13620CarboxypepD_reg 52.94
PF13602ADH_zinc_N_2 0.65
PF10518TAT_signal 0.65
PF12900Pyridox_ox_2 0.65



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A92.81 %
All OrganismsrootAll Organisms7.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001166|JGI12694J13545_1020299All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300001867|JGI12627J18819_10394614All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300005568|Ga0066703_10590674All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300009143|Ga0099792_11084102All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300012927|Ga0137416_11528645All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300019786|Ga0182025_1060230All Organisms → cellular organisms → Bacteria → Acidobacteria1475Open in IMG/M
3300020579|Ga0210407_11006707All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300020579|Ga0210407_11306631All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300021402|Ga0210385_11092700All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300027911|Ga0209698_11051708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300028047|Ga0209526_10744204All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300031474|Ga0170818_105724911Not Available608Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland7.84%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.23%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.58%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.92%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.27%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.27%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.27%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.61%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.61%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.96%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.31%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.31%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.31%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.65%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.65%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.65%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.65%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.65%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.65%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.65%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.65%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001166Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2EnvironmentalOpen in IMG/M
3300001174Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004101Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005883Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025406Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025854Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026006Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300026014Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)EnvironmentalOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028017Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029993Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030879Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12694J13545_102029913300001166Forest SoilLLLRRNAIFALLRIYIALAWPNSGLAATRVLRGYEQLNGSAMLLGRLQNPAVPVRISATL
JGI12679J13547_101369623300001174Forest SoilAFALLNIYIALAWPNSGLAAASVLQGYEQLNGAAMLLGRLQNPTAPVRISASF*
JGI12635J15846_1051002823300001593Forest SoilYLALAWPNSGFAAVRVVERYEQLSGAAMLLGRLQNPAVPVRLSARL*
C688J18823_1083157723300001686SoilIYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISASL*
JGI12627J18819_1039461423300001867Forest SoilFALLKIYVALAWPNSGLAAASVLQGYEQLNGAAMLLGRLQNPAAPVRISASF*
JGI25616J43925_1000688383300002917Grasslands SoilNATFVLIRIHIALAWPNSGLAAAPVIDGYGRLSSSAMLLGRLQNPATPVRLAAL*
Ga0062384_10057616813300004082Bog Forest SoilFVALVRIRIALVWPNFGLEATPVLDGYRELSGAAMLLGRLQNPAEPVRIAAS*
Ga0062387_10139313113300004091Bog Forest SoilRNATVALARIYLALAWPYSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSAMR*
Ga0062389_10318507613300004092Bog Forest SoilRIYLALAWPNSGFATVRLVDGYEQLSGAAMLLGRLQNPAVPVRLSAMLQM*
Ga0058896_119898913300004101Forest SoilRRNATFALLRIYVALAWPNSGLAVAPILRDYERLSGSAMLLGRLRNPAAPVRLASTL*
Ga0058899_1087755423300004631Forest SoilFALFRIYIALAWPHAGFAAAPVLDGYRHLNSSAMLLGRLQNPSAVMRISA*
Ga0066672_1043881623300005167SoilLSLAKIYAAMAWPNAGLAATRVADGYERLNGSAMLLGRLQNPAVRLSAALR*
Ga0070710_1029522713300005437Corn, Switchgrass And Miscanthus RhizosphereAWPNSGLAVTSVLHCYEQLNGSAMLLGRLQNPAVPVRISATL*
Ga0070710_1127783313300005437Corn, Switchgrass And Miscanthus RhizosphereLIRIYIALAWPNGGATAGPILHGYEQLNGSAMLLGRLQNPAAPMRISATL*
Ga0070735_1000421593300005534Surface SoilNCAFALIRIYIALAWPSGGATAALILHGYEQLNGSAMLLGRLQNPAAPVRISATL*
Ga0070735_1045902523300005534Surface SoilMFQIYLALAWPQSRFAAVRVVDRYERLSGSAMLLGRLQNPAMAVRLSSRTTM*
Ga0070730_1006416023300005537Surface SoilLLKIYVALAWPNSGLAAAPVLHGYERLNGSAMLLGRLRNPAVPVRISAT*
Ga0070731_1005424323300005538Surface SoilFALIRIYIALAWPNSGIAAVRVADRYEQLSGAAMLLGRLQNPAVAVRLAALR*
Ga0066661_1070700723300005554SoilLLLRRNASVALLRIYVALAWPHSALAAAPVLHGYEQLNGRAMLLGRLQNPGVPMRISAN*
Ga0066703_1059067413300005568SoilATLALFRIYVAMAWPDWDLAAAPILNGYIQLNGAAMLLGRLQNPAAPLRISAR*
Ga0066654_1014692423300005587SoilKIYVALAWPNSGFAAKPIVVGYQKLSGSAMLLGRLQNPAVPVRISAGM*
Ga0070762_1112265113300005602SoilQNAAVALFRIYIALAWPNSGLAATPVLDGYRELSGAAMLLGRLQNPAEPVRIAAS*
Ga0075287_105289713300005873Rice Paddy SoilYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISAG*
Ga0075293_107017113300005875Rice Paddy SoilTFALLKIYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISAG*
Ga0075299_100421013300005883Rice Paddy SoilLKIYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISAG*
Ga0070717_1162248613300006028Corn, Switchgrass And Miscanthus RhizosphereLRRNATFALIQIHIALAWPNSGLAAETVLNGYGRLNSSAMLLGRLQNPAVPVRLAAH*
Ga0066696_1074489423300006032SoilTFALLKIYVALAWPNSGFAASPVLHSYEQLNGTAMLLGRLQNPGVPVRISAGL*
Ga0075015_10013840413300006102WatershedsVALAWPSLGLAAAPILDGYERLNGSAMLLGRLQNPAAPVRISATW*
Ga0075030_10107057323300006162WatershedsALAWPPSSLAAAPVLDGYQQLSGAAMLLGRLQNPAAPVRISAL*
Ga0075014_10042855513300006174WatershedsALAWPFPNEAAAPILRGYEQLNGCTLLLTRLQNPAAPVHISANW*
Ga0070765_10060443223300006176SoilLLQIYVALAWPNSGLPAKPVLQGYEHLNASAMLLGRLQNPAAPVRIAAPR*
Ga0066659_1167353913300006797SoilPHVSLGSTPVVQRYERLNISAMLLGRLQTPSSPVRIAATS*
Ga0066660_1135692623300006800SoilALLLRRNATVALARIYLALAWPNSGFAAVPVFDRYERLSGAAMLLGRLQNPAVPVRLSALP*
Ga0075436_10050349623300006914Populus RhizosphereRRNATFALVKIYVATAWPNSGFAAKPIVACYQQLSGSAMLLGRLQNPAAPVRISASM*
Ga0102924_117999013300007982Iron-Sulfur Acid SpringIYVALAWPTSGPAADPVLRSYEELNGAAMLLGRLQNPAVPVRISATF*
Ga0099792_1070838313300009143Vadose Zone SoilTVALARIYLALAWPNSGFAAVRVVDRYERLSGTAMLLGRLQNPAVPVRLSTLP*
Ga0099792_1108410233300009143Vadose Zone SoilAKIYAAMAWPNSGLAASRVADGYEHLNGSAMLLGRLQNPTVPVRLSAAVR*
Ga0116218_110904623300009522Peatlands SoilYLALAWPNSGFAAAPILHGYEQLNGSAMLLGRLQNPAAPVRISARF*
Ga0116215_120564623300009672Peatlands SoilFALLRIYVALAWPNSGLAVAPILGDYERLNGSAMLLGRLQNPAVPVRLASTL*
Ga0116219_1029990023300009824Peatlands SoilVLLRIYGARFRPNSDLPAASVLYRYSQLSGAAMLLGRLQNPAAPVRI*
Ga0116223_1002305633300009839Peatlands SoilYVALAWPNSGLSVAPILGDYERLNGSAMLLGRLQNPAVPVRLASTL*
Ga0074046_1002618923300010339Bog Forest SoilVRIYLALALPNSGFAAVRVVDRYEHLSGVAMLLGRLQNPAAAIRLSALR*
Ga0136449_10056897923300010379Peatlands SoilRRNAAFVLLRIYLALAWPNAGLAAAPMVDHYQRLNSSAMLLGRLQDPTTPVRISS*
Ga0137399_1146681213300012203Vadose Zone SoilTLLRRNAALSLAKIYVALAWPNSGLAASRVADGYERLNGSAMLLGRLQNPGVPVRLSAVLR*
Ga0137398_1019651613300012683Vadose Zone SoilMARIYFALAWPNSTFAAVRVVERYEQLNGAAMLLGRLQNPAMPVRLSAQL*
Ga0137395_1056030323300012917Vadose Zone SoilSLAKIYAAMAWPNSGLAVSRVADGYERLNGSAMLLGRLQNPAVPVRLSAALR*
Ga0137416_1145006523300012927Vadose Zone SoilYLALAWPNSGFAAVRVVDRYERLSGTAMLLGRLQNPAASVRLSALR*
Ga0137416_1152864513300012927Vadose Zone SoilALLLRRNAALALLKIYLALAWPNAELGAGRIVEGYVQLSGSAMLLGRLQNPATPVRL*
Ga0137407_1239785823300012930Vadose Zone SoilAWPKSGLAATPVLRGYERLNGSATLLGRLQNPAAPVRISAR*
Ga0182015_1092345013300014495PalsaDALLLRRNTTVALVRIYLALAWPSSGFAALRVVERYEQLSGAAMRLGRLQNPAVAVRLSASI*
Ga0181525_1022687813300014654BogQVALARIYLAIAWPNSDFAAVRVVERYERLSCSAMLLGRLQNPAVPVRLSARI*
Ga0137418_1084945113300015241Vadose Zone SoilLLRRNAALSLAKIYVAMAWPNSAPAASHVADGYERLNGSAMLLGRLQNPAVPVRLSAALR
Ga0134072_1046597923300015357Grasslands SoilALVKIYVALAWPNSGFAAKPIVVGYQQLSGSAMLLGRLQNPAVPVRISAAM*
Ga0132256_10145066113300015372Arabidopsis RhizosphereRNATIAMLRIYVALVWPQSSPAAAPLLHGYEQMSGRAMLLGRLQNPAVPVRISAN*
Ga0182032_1192841213300016357SoilALLRIYVALAWPESGLAAAPIVHGYEQLSNRAMLLGRLQDPAIPVRIAINL
Ga0182034_1208520413300016371SoilVALAWPTSRPLAAPILLGYERLNGSAMLLGRLTNPAVPVRISAMS
Ga0181511_122262313300016702PeatlandALLLRRNSTVALARIYIALAYPNSGFAALRVVDRYEQLSSSAMLLGRLQNPAAAVRLFRS
Ga0187806_116556123300017928Freshwater SedimentVRIYIALAWPNGGSAAGPVLDGYRHLHGSAMLLGRLQNPATPVRISAS
Ga0187848_1016300723300017935PeatlandLLRRNTTVALARIYLALAWPNSGFAAVRVVDRYQDVSSTAMLLGRLQNPAVPVRLSSLS
Ga0187819_1056277023300017943Freshwater SedimentLLLRRNAAFVLLRIYVALAWPNAGLAAAPMVDHYKRLNSSAMLLGRLQDPSTPVRISS
Ga0187847_1077593913300017948PeatlandSDALMLRRNSTVALARIYLALAWPNSDFAAVRVVDRYERLSGAAMLLGRLQNPAIPVRIAAH
Ga0187805_1049866723300018007Freshwater SedimentVWPELGLRGGQIAEGYVRLSGSAMLLGRLQNPAATVRVSASRL
Ga0187888_126485223300018008PeatlandARIYLALAWPNSGFAAVRVFDRYQDVSSTAMLLGRLQNPAVPVRLSSLS
Ga0187884_1044677223300018009PeatlandRRNSTVALARIYLALAWPRSGFAALRVVDGYEHLSGAAMLLGRLQNPAAPVRLSALL
Ga0187872_1049618423300018017PeatlandVRIYLALVYPGSGFAAVRVVDRYEQLNGSAMLLGRLQNPAAAVRLSSHS
Ga0187882_118459023300018021PeatlandYLALVYPGSGFAAVRVVDRYEQLNGSAMLLGRLQNPAAAVRLSSHS
Ga0187864_1044247613300018022PeatlandTTVALVRIYLALVYPGSGFAAVRVVDRYEQLNGSAMLLGRLQNPAAAVRLSSHS
Ga0187871_1001279143300018042PeatlandARIYLALAWPNSEFAAERVVDRYEQLSGSAMLLGRLQNPAAAVRLASHS
Ga0187871_1076920023300018042PeatlandNTTLALARIYVALALPSSNFAAVRVIERYEQVSGSAMLLGRLQNPRAAVRLSARI
Ga0187887_1064308623300018043PeatlandARIYLALAWPNSEFAAERVVDRYEQLSGSAMLLGRLQNPAAAVRLASYS
Ga0187858_1040734913300018057PeatlandALLRIYIALAWPNSGLVAAPVLNVYEQLNGAAMLLGRLQNPAVPVRISATF
Ga0187769_1003732123300018086Tropical PeatlandNAGLALLRIYGARAWPNRGLTAAPILDGYVRLSSMAMLLGRLQNPAAPVRISTR
Ga0182025_106023033300019786PermafrostLVDRALLLRRNTTIAQARIYLAVAWPHSTFAAVRVIDRYEQVSGSAMLLGRLQNPAAAVRLSAQS
Ga0193729_109471123300019887SoilTVALARIYVALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSALR
Ga0210407_1100670713300020579SoilLRRNATFALLRIYVALAWPNSGLAVATILRDYERLSGSAMLLGRLRNPAAPVRLASTL
Ga0210407_1130663113300020579SoilKIYGAMAWPNSGLAVSRVADGYERLNGSAMLLGRLQNPAAPVRLSAALR
Ga0210401_1057130823300020583SoilLRRNATVALARIYLALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVAVRLSARL
Ga0210404_1011532913300021088SoilRNTTVALARIYLALAWPNSDFAAVRVVDRYEQLSGTAMLLGRLQNPAVPVRLSALQ
Ga0210400_1001602143300021170SoilNAILALIRIYMALAWSRSEFAAVRVVDRYEQLSGSAMLLGRLQNPAAAVRLSSSN
Ga0210388_1128054213300021181SoilIYVALAWPNSGLAAEPVLRGYEKLNGSAMLLGRLQNPAIPVRISATL
Ga0210385_1109270013300021402SoilIALAWPNSGLAAVAVLHGYEQLNGSAMLLGRLQNPAAPVRISATL
Ga0210386_1050134913300021406SoilPRLLRNTTVALLRIYLALAWPNSPLAAARVIDRYEQVSGSAMLLGRLQNPAAAVRLSSRS
Ga0210383_1004554313300021407SoilLLRIYIAMAWPTSGLAAAPVLHSYEQLNGSAMLLGRLQNPAAPVRIAAML
Ga0210384_1189411913300021432SoilTTIAMFRIYVALAWPDSGLTATPVLQSYEQLNGSAMLLGRLQNPAAPLRIAATS
Ga0210392_1034687713300021475SoilALVLRRNTTVALARIYLALPWPNSGFAAERVVDRYEQLSGAAMLLGRLQNPAVPVRLSAL
Ga0210392_1103729713300021475SoilLRIYVALAWPHSALAAAPVLHGYEQLNGRAMLLGRLQNPAVPVRISAN
Ga0213853_1141896913300021861WatershedsNAGFAAAPVLDGYRQLHGSAMLLGRLQNPAIPVRISVSL
Ga0212123_1040632323300022557Iron-Sulfur Acid SpringFALLRIYVALAWPNPASSAAPVLTGYERLNGAAMLLGRLQNPAAPVRISAM
Ga0242661_116232623300022717SoilLRIYFALAWPHSALAAAPVLQGYEQLNGRAMLLGRLQNPAVPVRISAN
Ga0208035_100049863300025406PeatlandLLRRNATIALLRIYVALAWPNSGFAAERVVERYEQVSSVAMLLGRLQNPGAAVRL
Ga0209176_1011208123300025854Arctic Peat SoilRIYIALVWPNSGLAATPILHGYERLNGSAMLLGRLQNPAAPVRISASL
Ga0207684_1033159313300025910Corn, Switchgrass And Miscanthus RhizosphereNAAFALVRIYIALAWPNSGLAAVPVLDGYLQLNGSAMLLGRLQNPAVPVRISATL
Ga0208533_10854323300026006Rice Paddy SoilLKIYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISAG
Ga0208776_101676023300026014Rice Paddy SoilLLMRRNATFALLKIYVALAWPNSGFAAKPIVLGYQQLSGSAMLLGRLQNPAVPVRISAG
Ga0209849_104004623300026215SoilIYVALAWPHASLGSTPVVQRYERLNVSAMLLGRLQNPAAPVRIAATS
Ga0209131_132852613300026320Grasslands SoilARIYLALAWPNSGFAAVRVVDRYERLSGTAMLLGRLQNPAASVRLSAIR
Ga0257154_102976313300026467SoilFALLRIYVALAWPNSGLAAEPVLRGYEKLNGSAMLLGRLQNPATPVRISASL
Ga0209156_1043119613300026547SoilLLMRRNATFALVKIYVALAWPNSGFAAKPIVVGYQQLSGSAMLLGRLQNPAVPVRIFAGM
Ga0209648_1046257633300026551Grasslands SoilMAWPNSGLVASRVADGYERLNGSAMLLGRLQNPAVAVRLSAALR
Ga0179587_1079990313300026557Vadose Zone SoilLALAWPNSGFAAVRVVEHYEQLSGAAMLLGRLQNPAVPVRLAARL
Ga0209729_103081223300027061Forest SoilRRNASVALLRIYVALVWPHSPFAAAPVLHGYEQLSGRAMLLGRLQNPAVPVRIAAN
Ga0209525_111752313300027575Forest SoilVNQALVLRRNSAVTLVKIYVAMAWPYSGLAAVRVIERYEQMSGSAMLLGRLQEPGAAVRLSRT
Ga0208044_113464323300027625Peatlands SoilLLLRRNATVALARIYLALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSAMR
Ga0209009_109903613300027667Forest SoilALMRIYVALAWPNSKFAAVRVVDRYERLSGAAMLLGRLQNPAAPVRISASF
Ga0209009_115492023300027667Forest SoilALAWPNSGFAAVRVVERYEQLSGAAMLLGRLQNPVVPVRLSAST
Ga0209656_1040022113300027812Bog Forest SoilVNDALLVRRNAAFALMRLYVAWAWPHVGFAAAPVLDGYRHLDSSAMLLGRLKNPSAVVRISA
Ga0209040_1012407323300027824Bog Forest SoilLIRIHVALAWPNAGLPAAPVLHGYERLNGAAMLLGRLQNPAVPVRISATS
Ga0209773_1005882213300027829Bog Forest SoilRNATVALARIYLALAWPYSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSAMR
Ga0209693_1015692323300027855SoilAWLWPHFDRPTITILNSYERLNGSAMLLGRLQNPSAPVRISATS
Ga0209169_1006499323300027879SoilRVVNDALLLRRNTTIALVRIYLALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLS
Ga0209169_1067981113300027879SoilTLALARIYLALAWPNSGVAALRVVDRYERLSGSAMLLGRLQNPAATVRLSPR
Ga0209590_1008860013300027882Vadose Zone SoilLLRRNTTVALARIYLALAWPNSGFAAVRVVERYEQLSGAAMLLGRLQNPAVAVRLSARL
Ga0209590_1096975513300027882Vadose Zone SoilVRIYIALAWPNSGLAAAPVLHGYLQLNGSAMLLGRLQNPAVPVRISATL
Ga0209380_1085285713300027889SoilLRRNTTVALVRIYLALAWPSSGFAALRVVERYEQLSGAAMRLGRLQNPAAAVRLSASI
Ga0209415_1034816513300027905Peatlands SoilYIALAWPNSGLVAAPVLNGYEQLNGAAMLLGRLQNPAVPVRISATF
Ga0209698_1105170813300027911WatershedsALAWPPSSLAAAPVLDGYQQLSGAAMLLGRLQNPAAPVRISAL
Ga0209168_1001374713300027986Surface SoilNCAFALIRIYIALAWPSGGATAALILHGYEQLNGSAMLLGRLQNPAAPVRISATL
Ga0265356_101017013300028017RhizosphereLLRRNTTVALARIYLALAWPYSEFAAVRVVERYEHLSGAAMLLGRLQNPAVAVRLSAVR
Ga0209526_1074420423300028047Forest SoilNAAFALMRIYVALAWPNSGLAAEPVLQRYEQLNGSAMLLGRLQNPASPMRISASL
Ga0137415_1125118823300028536Vadose Zone SoilYLALAWPNSGFAAVRVVDRYERLSGTAMLLGRLQNPAASVRLSALR
Ga0302156_1004471423300028748BogAMARIYMALAWPNSGFAAVRVVDRYEKLSGAAMLLGRLQNPAAPVRLSALR
Ga0302225_1005596013300028780PalsaALAWPNFDLAAEPILRGYERLNRSAMLLGRLQNPAAPVRISATL
Ga0302279_1037982123300028783BogIYIALAWPRSDFAAVRVVDRYEKLSGSAMLLGRLQDPATAVRLSSRR
Ga0302189_1023504623300028788BogIYMALAWPNSGFAAVRVVDRYEKLSGAAMLLGRLQNPAAPVRLSALR
Ga0302228_1016737323300028808PalsaLAWPNFDLAAEPILRGYERLNRSAMLLGRLQNPAAPVRISATL
Ga0308309_1176041823300028906SoilRIYLAMAWPNSGFAAARVVDRYEHLSGAAMLLGRLQNPAVPVRISALP
Ga0302304_1007567023300029993PalsaALLLRRNAHVALARIYLALAWPNSDFAAVRVVERYEHLSGAAMLLGRLQNPAVPVRLTAS
Ga0311339_1038580113300029999PalsaTTLALARIYVALAWPYSTFAAVRVIDRYEQVSGSAMLLGRLQNPALAVRLSARG
Ga0302270_1071744313300030011BogHVALARIYLALAWPNSDFAAVRVVERYEHLSGAAMLLGRLQNPAVPVRLSA
Ga0210277_1051496813300030528SoilNDALVLRRNTTLALAQIYLALAWPSSGFAAVRVVDRYERLSGSAMLLGRLQNPAVPVRLSSLR
Ga0265460_1299280523300030740SoilNATVALARIYLALAWPNSGFAAVRVVDRYERLSGAAMLLGRLQNPAVPVRLSALR
Ga0265765_106809423300030879SoilEALLLRRNTSVTLARIYLAMAWPNSGFAAARVVDRYEHLSGAAMLLGRLQNPAVPVRISALP
Ga0302180_1018932113300031028PalsaRIYVALAWPYSTFAAVRVIDRYEQVSGSAMLLGRLQNPALAVRLSARG
Ga0170824_10124599713300031231Forest SoilLALAWPTSGLAAAPVLRSYEQLNGSAMLLGRLQNPAAPVRIAAML
Ga0170824_10590359223300031231Forest SoilLLRIYVALAWPNSGLAAAPILRGYERLNGSAMLLGRLQNPAAPVRISATL
Ga0170824_10593571713300031231Forest SoilRRNASVALLRIYVALAWPHSALAAAPVLHGYEQLNGRAMLLGRLQNPAVPVRISAN
Ga0170818_10572491123300031474Forest SoilAFFALMKIRAAWMWPNSGLGVSPILVGYERLNGSAMLLGRLRNPSTAVRISANS
Ga0265314_1053230123300031711RhizosphereAWPNSPLSADPILRGYEQLNGSAMLLGRLQNPAVPVRISATW
Ga0307469_1089703913300031720Hardwood Forest SoilALARIYLALAWPNSGFAAVRVVERYEQLSGAAMLLGRLQNPAVPVRLAARL
Ga0307475_1042995113300031754Hardwood Forest SoilNATLALIRIYMALAWPRSEFAAVRVVDRYEQLSGSAMLLGRLQNPAAAVRLSSSN
Ga0307475_1136529813300031754Hardwood Forest SoilNAAFALLKIYVALAWPGSNISATPVLRGYEQLNFSAMLLGRLQNPSAVVRISA
Ga0307478_1035556113300031823Hardwood Forest SoilLLRRNAAFALLRIYLAQAWPNSGLAAEPVLRGYEKLNGSAMLLGRLQNPATPVRISAPL
Ga0306925_1032150413300031890SoilRRNATIALLRIYVALAWPQSALVAAPIVHGYEQLSGRAMLLGRLQNPAVPVRISSSL
Ga0310913_1077386213300031945SoilLLRIYVALAWPTSRPLAAPILLGYERLNGSAMLLGRLTNPAVPVRISAMS
Ga0307470_1161189423300032174Hardwood Forest SoilRRNATFALFKIYVALAWPNAGLAADRILHSYERLNGSAMLLGRLQSSASPGRTSAS
Ga0307471_10422937523300032180Hardwood Forest SoilRNCTLALARIYMALAWPNSGFAAVRVVDRYEQLSGAAMLLGRLQNPAVPVRLSALL
Ga0335079_1011050223300032783SoilNSTIALLRIYVALAWPQSALAAAPIVHGYEQLSGRAMLLGRLQNPAAPVRIAVNP
Ga0335078_1188557423300032805SoilALLKIYTVWAWPSSVQSAVSILHGYEQMSGSAMLLGRLQNPAVPVRI
Ga0335076_1046245813300032955SoilAFALLKIYTVWAWPSSVQSAVSILHGYEQMSGSAMLLGRLQNPAVPVRI
Ga0335077_1222568623300033158SoilLRRNATFALLRIYIAMAWPDSNMAAAPILQGYVQLNGSAMLLGRLQNPAVPVRISAT
Ga0326724_0086719_2_1873300034091Peat SoilDALLVRRNATVALARIYIALAWPNSGVAAVRVVDRYERLSGSAMLLGRLQNPATPVRLSP
Ga0370515_0303069_523_6753300034163Untreated Peat SoilLARIYLALAWPNSDFAAVRVVERYEHLSGAAMLLGRLQNPAVPVRLTASI
Ga0370515_0447047_1_1443300034163Untreated Peat SoilIYFALAWPNSDFAAVRVVDRYERLSGAAMLLGRLQNPGVPVRLAASR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.