NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045278

Metagenome / Metatranscriptome Family F045278

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045278
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 63 residues
Representative Sequence ADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR
Number of Associated Samples 137
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.66 %
% of genes near scaffold ends (potentially truncated) 96.73 %
% of genes from short scaffolds (< 2000 bps) 93.46 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.386 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(13.072 % of family members)
Environment Ontology (ENVO) Unclassified
(25.490 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.712 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106
1Ga0058904_14332981
2Ga0062595_1008186872
3Ga0062378_100158182
4Ga0062594_1024017581
5Ga0066672_105872921
6Ga0066677_108485422
7Ga0066680_103553821
8Ga0066678_106888791
9Ga0066676_104881432
10Ga0070676_108842062
11Ga0066388_1046129802
12Ga0066388_1065069432
13Ga0068868_1012326301
14Ga0070708_1009960492
15Ga0066689_100961093
16Ga0066682_106303792
17Ga0070732_103046622
18Ga0070695_1001439034
19Ga0070704_1001834151
20Ga0066703_101375511
21Ga0066691_101540301
22Ga0066691_107788201
23Ga0066706_101671221
24Ga0070766_100483945
25Ga0066651_101257182
26Ga0066696_104225362
27Ga0075028_1010170412
28Ga0075019_105529161
29Ga0075014_1004429282
30Ga0070765_1018220281
31Ga0075422_102214701
32Ga0066659_118691051
33Ga0075420_1015411992
34Ga0075434_1001549221
35Ga0068865_1006515033
36Ga0075424_1017588832
37Ga0099793_105265601
38Ga0099830_108104121
39Ga0099830_118329101
40Ga0111539_124535082
41Ga0066709_1010604762
42Ga0114129_118024701
43Ga0116218_15484241
44Ga0126304_104931722
45Ga0126311_117824851
46Ga0127497_11243361
47Ga0134082_101705772
48Ga0134086_104805061
49Ga0134111_100290801
50Ga0134111_105298141
51Ga0126376_108177891
52Ga0126372_103486442
53Ga0126378_100959671
54Ga0105239_130836101
55Ga0126383_102293203
56Ga0126383_121939512
57Ga0150983_144568902
58Ga0137438_12537821
59Ga0137365_110400882
60Ga0137363_117872832
61Ga0137380_108806672
62Ga0137377_100161357
63Ga0137459_10920281
64Ga0137371_103803802
65Ga0137371_113972331
66Ga0137385_110358011
67Ga0137361_100104401
68Ga0134047_11524481
69Ga0134053_12166241
70Ga0137396_104363741
71Ga0137394_107544832
72Ga0137410_100939661
73Ga0137410_119775251
74Ga0181538_104502541
75Ga0075323_11633461
76Ga0157380_111012422
77Ga0182024_114367832
78Ga0132256_1026786752
79Ga0132257_1022889212
80Ga0132257_1037227911
81Ga0132255_1009310093
82Ga0134069_11985421
83Ga0134112_100540303
84Ga0187817_101027341
85Ga0187822_102810982
86Ga0187822_103114791
87Ga0184610_12632852
88Ga0184627_100623321
89Ga0184627_105123341
90Ga0184639_103533551
91Ga0184639_104953582
92Ga0190265_114302333
93Ga0066655_105130172
94Ga0190274_132200051
95Ga0210407_106658641
96Ga0210399_102334201
97Ga0210400_115893892
98Ga0210405_102366571
99Ga0210405_108987131
100Ga0210405_110945481
101Ga0210405_113699782
102Ga0210397_114822492
103Ga0210389_106596462
104Ga0210383_117331242
105Ga0210398_108923192
106Ga0210402_118577622
107Ga0210410_116717382
108Ga0210409_112217432
109Ga0242642_10389502
110Ga0242660_10366971
111Ga0242654_103301991
112Ga0224564_10221331
113Ga0137417_14346041
114Ga0209109_103244141
115Ga0209108_101740092
116Ga0209640_100916754
117Ga0207649_112269251
118Ga0207704_109903502
119Ga0207679_119912722
120Ga0207677_111053292
121Ga0207648_110632582
122Ga0209472_11776362
123Ga0209801_13097011
124Ga0209267_11273021
125Ga0209057_12105701
126Ga0209378_12922282
127Ga0209003_10283372
128Ga0209682_101683052
129Ga0209178_11017952
130Ga0209060_105067512
131Ga0209701_103942112
132Ga0209579_101747601
133Ga0209590_102589911
134Ga0209590_109262301
135Ga0209488_100314546
136Ga0308309_102043111
137Ga0311339_115968111
138Ga0307500_103166492
139Ga0302324_1023293011
140Ga0307408_1000849763
141Ga0307484_1170862
142Ga0310686_1086119623
143Ga0310686_1100595622
144Ga0307476_108110051
145Ga0307474_105485221
146Ga0307469_102999591
147Ga0307475_104112172
148Ga0307412_102376202
149Ga0310901_103486552
150Ga0307479_101908933
151Ga0315281_106396271
152Ga0307470_107568373
153Ga0335085_116876021
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.71%    β-sheet: 25.00%    Coil/Unstructured: 64.29%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055ADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
97.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Sediment
Bog
Wetland Sediment
Freshwater Sediment
Soil
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Soil
Natural And Restored Wetlands
Permafrost
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Palsa
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
3.3%3.9%13.1%3.3%5.9%11.8%11.1%4.6%3.3%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058904_143329813300004100Forest SoilADYSDYADHGEILTDIKSPGHMVQKQGGSTVLDIQIKSWDANNPYLVFPIPRNVKMATQQSSKVAER*
Ga0062595_10081868723300004479SoilSEAEYSGYADHAEVLTDVKTPAHMVFKRGGRTVADITVKTWETNNPYLVFPVPPNVKATPATTSR*
Ga0062378_1001581823300004780Wetland SedimentVLTDIKTPGHIVRQQAGRTVLDITVKNWETNNLYLVFPVPANVKAATPASAR*
Ga0062594_10240175813300005093SoilNLATETTYSDYADRAEVLTDIQTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR*
Ga0066672_1058729213300005167SoilILTDIKSPGHIVEKRAGVTVLDIQIKMWDANNPYLVFPVPPSVKGGGTQQSVNRTQ*
Ga0066677_1084854223300005171SoilEVRPGNAALANLASETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR*
Ga0066680_1035538213300005174SoilKTDNAALANLAFETEYSGYADHGEILTDIQSPGRIVIKQGGSTVQDIQIKAWEANNPYVVFPVPGNVKTAAGNSR*
Ga0066678_1068887913300005181SoilSLAFETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKAWESNNPYLIFPVPPNVKTVANSR*
Ga0066676_1048814323300005186SoilRPDNASLANLALETEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTAANSR*
Ga0070676_1088420623300005328Miscanthus RhizosphereASLATETEYSDYADRGEVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPVPQNVKTAAAASSR*
Ga0066388_10461298023300005332Tropical Forest SoilETRPDNPARANLATQTEYSNYADHGEVLTDIKSPGHIVRKQGGRTVLDIEVKNWEANNHYIVFPVPPNVKTAATTSR*
Ga0066388_10650694323300005332Tropical Forest SoilHGEVLTDIKSPGRIVQKQGGRPVLDLQIKTWEANNPYLVFPVPGNVKTASASR*
Ga0068868_10123263013300005338Miscanthus RhizosphereEVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPVPQNVKTAAAASSR*
Ga0070708_10099604923300005445Corn, Switchgrass And Miscanthus RhizosphereDNLARANLATETEYSNYADHAEVLTDIKTPGHIVRKQGGRTMFDLQVKTWETNNPYLVFPVPPNVKSASPPNSR*
Ga0066689_1009610933300005447SoilETRPDNPALANMATETEYSGYADHGEVLTDIKSPGRIVKKQGGRPILDIQVSMWEANNPYLVFPVPPNVKTAASR*
Ga0066682_1063037923300005450SoilNLVAEYSDYADHGEILTDIQSPGHIVQKQGGRTTLDIQIKTWEANNPYLVFPVPPNVTGRK*
Ga0070732_1030466223300005542Surface SoilADHGEILTDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQESSKVAER*
Ga0070695_10014390343300005545Corn, Switchgrass And Miscanthus RhizosphereTYSDYADRAEVLTDIQTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR*
Ga0070704_10018341513300005549Corn, Switchgrass And Miscanthus RhizosphereALVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKAWETNNPYLVFPVPPSARAAAPNSR*
Ga0066703_1013755113300005568SoilADHGEILTDIKSPGRIVQKQGGSPVLDIQIKVWDANNPYLVFPIPGNVKNATAPGQSASRQP*
Ga0066691_1015403013300005586SoilEYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR
Ga0066691_1077882013300005586SoilKVETRPDNPALANMATETEYSDYADHGEILTDIKSPGHIVQKQGGRPLLDIQVKLWEANNPYLVFPVPPNVKTNSR*
Ga0066706_1016712213300005598SoilLAFEIEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKAAGADSR*
Ga0070766_1004839453300005921SoilIATDVKSPGHIVRKQGGHPVLDIQVKMLDANNPYLVFPVPENVKKAAAH*
Ga0066651_1012571823300006031SoilTLDAKNLVTKVEARPENAALDTLAFEIEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0066696_1042253623300006032SoilYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIAVKMWEANNPYLVFPVPGNVKTAAGNSH
Ga0075028_10101704123300006050WatershedsYADHGEIATDVKSPGHIVRKQGGHPVLDIRVKMLDANNPYLVFPVPENVKKAAAH*
Ga0075019_1055291613300006086WatershedsADHGEIATDVKSPGHIVRKQGGHPVLDLQVKTLDANNPYLVFPVPENVKKAAAH*
Ga0075014_10044292823300006174WatershedsYADHGEIATDVKSPGHIVRKQGGHPVLDIQVKMWDANNPYLVFPVPENVKKAAAN*
Ga0070765_10182202813300006176SoilSDYADHGELLTDIKSPGHIVEKQAGRPVLDIRVKMVDANNPYLVFPVPPNVKAAAATGK*
Ga0075422_1022147013300006196Populus RhizosphereLVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKTWETNNPYLVFPVPPNVKAPAAANPR*
Ga0066659_1186910513300006797SoilNMETQYFDYADHGEVLTDIKSPGHIVQKQGGRTILDIRIKTWEANNPYLVFPVPKNVTAAR*
Ga0075420_10154119923300006853Populus RhizosphereLVTGVETRSETPALVTQTDYANYADRAEILTDIKTPGRIVRRQGGRTVLDIEVKTWETNNPYLVFPVPPNVKAPAAANPR*
Ga0075434_10015492213300006871Populus RhizosphereAEYSGYADHGEILSDIQSPGHIVQKQGGRTTLDMQIKAWEANNPYLVFPVPKNVTGSK*
Ga0068865_10065150333300006881Miscanthus RhizosphereANLALQTEYSDYADHAEVLTDIKTPGHIVGKRDGRTVFDLTVKSWETNNPYLVFPVPPNVKAAATTSPTSR*
Ga0075424_10175888323300006904Populus RhizosphereTRPDNPSLVNLAIEAEYSDYADHGEILTDIQSPGRIVQRQGGRTILDIQIKTWEANNPYLIFPVPQNVSGQK*
Ga0099793_1052656013300007258Vadose Zone SoilADRGEVLTDIKSPGHIVRRQGGRPLLDIRVKMWEANNPYLVFPVPPNLKTGA*
Ga0099830_1081041213300009088Vadose Zone SoilYADHGEIPTDVKSPGHIVQKQGGHTLLDIQVKKVDANNPYLVFPVPENVKKAAAH*
Ga0099830_1183291013300009088Vadose Zone SoilSKNFITKVETRPDNPALTNLATETEYSDYADHGEVLTDIKSPGHIVHKQAGRPALDIQVKMVDANDPYLVFPVPSNVKAAATASASKTGGN*
Ga0111539_1245350823300009094Populus RhizosphereDHGEILTDVKSPGHIVEKLAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARTQAGSSR*
Ga0066709_10106047623300009137Grasslands SoilADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR*
Ga0114129_1180247013300009147Populus RhizosphereVRKVETRPDNPSLANLAIETEYSDYADHGEILTDIQSPGRIVQRQGGRTVLDIQIKTWEANNPYLIFPVPQNVSGQK*
Ga0116218_154842413300009522Peatlands SoilYADHGEILTDIKSPGHIVRKQGGHPSLDIKVKTLDANNPYLVFPVPDNVKKAAAH*
Ga0126304_1049317223300010037Serpentine SoilYADYADRAEVLTDIKTPGRIVRRQGCRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR*
Ga0126311_1178248513300010045Serpentine SoilADRAEVLTDIKTPGHIVRKQGGRTVLDVTIKNWETNDPYLVFPVPPNVKSAATR*
Ga0127497_112433613300010109Grasslands SoilTRPENAALANLAFETEYSGYRDHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAVATDSR*
Ga0134082_1017057723300010303Grasslands SoilGEILTDIRSPGRIVRKQGGRTVLDIAVKMWEANNPYLVFPVPGNVKTAAGNSR*
Ga0134086_1048050613300010323Grasslands SoilNAALANLASETEYSGYADHGEILTDIQSPGRIVQKQGSRTVLDIQIKTWESNNPYLIFPVPPNVKTAANSR*
Ga0134111_1002908013300010329Grasslands SoilEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKLWEANNPYVVFPVPGNVKTAAGNSR*
Ga0134111_1052981413300010329Grasslands SoilTEYSDFADHGEILTDIKSPGHIVRRQGGRPILDIQVKTWEANNPYLVFPVPPNVKTAAANSR*
Ga0126376_1081778913300010359Tropical Forest SoilSDYADHGEILTDLESPGRIVEKQGGTTVLDIQVKMADLNNPYLVFPVPDTVKKASAELIQKR*
Ga0126372_1034864423300010360Tropical Forest SoilRPDNPALTNMVTETEYSDYADHGEVLTDIKSPGRIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKAAAVSR*
Ga0126378_1009596713300010361Tropical Forest SoilVEAHSDNPKLAGMIAEADYSDYADHGEILTDLESPGRIVEKQGGTTVLDIQVKMADLNNPYLVFPVPDTVKKASAELIQKR*
Ga0105239_1308361013300010375Corn RhizosphereANLACTVEYSNYADHAEVLTDVQTPGRIVAKEGGRTVLDMTVKTWETNNPYLVFPVPPNVKAAPASTTSR*
Ga0126383_1022932033300010398Tropical Forest SoilANLAIEAEYSDYADHGEILTDIQSPGRIVQRQGGRTVLDIQIKTWEANNPYLIFPVPPNVSGRK*
Ga0126383_1219395123300010398Tropical Forest SoilSLITKVETKPENSALAGLAFETEYSGYADHGEVLTDIKSPGHVVQKQAGRPVLDLQIKTWEGNNPYLVFPVPGNVKTASR*
Ga0150983_1445689023300011120Forest SoilDIEADYSDYADHGEILTDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER*
Ga0137438_125378213300011431SoilTEYSNYADHAEVLTDIKSPGRIVRKQGGRTTFDIQVKAWETNNPYLVFPVPPNVKTAATANSR*
Ga0137365_1104008823300012201Vadose Zone SoilFETEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0137363_1178728323300012202Vadose Zone SoilLTDVKSPGHIIRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR*
Ga0137380_1088066723300012206Vadose Zone SoilGEILTDIKSPGRIVQKQGGSPVLDIQIKMWDANNPYLVFPIPGNVKNATAPGQSASRQP*
Ga0137377_1001613573300012211Vadose Zone SoilLTDIKSPGRIVQKQGGSPVLDIQIKMWDANNPYLVFPIPGSVKNAAAPGQSASRQP*
Ga0137459_109202813300012228SoilVETRSDIPALATLTTQTEYSNYADRAEVLTMRPGVLMSVRKQGGRTILDIEVKTWETNNLYLVFPVPANVKAAATGNSR*
Ga0137371_1038038023300012356Vadose Zone SoilPENAALANLAFETEYSGYADHGEILTDIRSPGRIIRKQGGRTVLDIEVKMWEANNPYVVFPVPGNVKTAAGNSR*
Ga0137371_1139723313300012356Vadose Zone SoilRPDNPALANMATETEYSDYADHGEILTDIKSPGHIVQKQGGRPLLDIQVKWWEANNPYLVFPVPPNVKTNSR*
Ga0137385_1103580113300012359Vadose Zone SoilQDTQALANMTTQTEYSDYADHGEILTNIKSPGHIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKTNSR*
Ga0137361_1001044013300012362Vadose Zone SoilDIKSPGHIVEKQAGRPVLDLQVKMVNANDPYLVFTVRANVKAATTQTSATGTGGN*
Ga0134047_115244813300012380Grasslands SoilANLSFEAEYSGYADHGEILTDIRSPGRIIRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR*
Ga0134053_121662413300012406Grasslands SoilDHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR*
Ga0137396_1043637413300012918Vadose Zone SoilALANLVTETEYSDYADHGEILTDIKSPGHIVQRQGGRPILDIQVNMWEANNPYLVFPIPPNVRTAASR*
Ga0137394_1075448323300012922Vadose Zone SoilETEYSGYADHGEILTNIKSPDHIVQRQGGRLMLDIQVKMWEANNPYLVFPVPPNVKTATR
Ga0137410_1009396613300012944Vadose Zone SoilLAMETEYSDYADRGEVPTDIKSPGRIVQKQGGRPMLDIQVKTWEANNPYLVFPVPPNVKTASR*
Ga0137410_1197752513300012944Vadose Zone SoilTRADNPARANLVTVTEYSNYADRGEVPTDIKTPGRIIRRMGGRTLLDIEVKSWETNDPYLVFPVPPNVKTAAAGNSR*
Ga0181538_1045025413300014162BogLLTDIKSPGHIVEKQAGSPVLDIRVKGVDANNPYLVFPVPANVKAASATGK*
Ga0075323_116334613300014301Natural And Restored WetlandsEVPTDIKTPGHIVRKRGGRTVLDVTVKNWETNDPYLVFPVPPNVSTH*
Ga0157380_1110124223300014326Switchgrass RhizosphereAEVLTDIKTPGRIVRRQGTRTVLDVNVMVWETNNPYLVFPVPANVKGAAANR*
Ga0182024_1143678323300014501PermafrostDLNLEAEFTDYADHGEIPTDVKSPGHIVEKQGGKPMLDLQIKTWDANNPYLVFPVPENVKKAGGQ*
Ga0132256_10267867523300015372Arabidopsis RhizosphereGEILTDVKSPGHIVLKQAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARGQAGSSR*
Ga0132257_10228892123300015373Arabidopsis RhizosphereGEILTDVKSPGRIVQRVGGKPLLDVKITKVDANNPYLVFPVPPNVKAARTQAGSSR*
Ga0132257_10372279113300015373Arabidopsis RhizosphereSNYADHATEVLTDVKSPGHIVRKQGGRTVLDITVKSWEANDPYLVFPVPPNVKSAPSSR*
Ga0132255_10093100933300015374Arabidopsis RhizosphereYADHGEILTDVKSPGHIVLKQAGKPLLDVKTTKVDANNPYLVFPVPPNVKAARGQAGSSR
Ga0134069_119854213300017654Grasslands SoilTLDSKNFVTKVETRPDNPTLANMAIETEYFDYADHGEIQTDIKSPGHIVQRQGGRPMLDIQVKMWEANNPYLVFPVPPNVKTNSR
Ga0134112_1005403033300017656Grasslands SoilLTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYLVFPVPGNVKTAAGNSR
Ga0187817_1010273413300017955Freshwater SedimentADHGELLTDIKSPGHIVEKQAGRPMLDIRVKGVDANNPYLVFPVPANVKAASATAK
Ga0187822_1028109823300017994Freshwater SedimentVRATLDSKNLVTKVETHSENPALTNFVTEYSEYADHGELLTDVMSPGHVVQKQDGRLVLDLRIKMVDANNPYLVFPVPQSVKTAAAATSGPK
Ga0187822_1031147913300017994Freshwater SedimentHGEIATDILSPGHIVRKQGGHPVLDIQVKMLDANNPYLVFPVPENVKKAAAH
Ga0184610_126328523300017997Groundwater SedimentSNYADHGEILTDIKSPGRIVRRQRGRTILDIEVKTWEANNPYLVFPIPPNVRGAATANR
Ga0184627_1006233213300018079Groundwater SedimentNPARVNLATQTEYSSYADRGEVLTDIKSPGHIIRRQGGRTLFDMEVKAWESNNPYLVFPVPPNVKAAATATSR
Ga0184627_1051233413300018079Groundwater SedimentVTHTEYSNYADRAEILKDIKTPGRIVRKQGGRTILDLELKTAETNNPYLVFPVPPNVKAAASQSR
Ga0184639_1035335513300018082Groundwater SedimentLTDIKSPGRIIRRQGGRTLLDIEVKTWETNNLYLVFPVPPNVKTAATANSR
Ga0184639_1049535823300018082Groundwater SedimentEYSNYADRAEILTNIKSPGRIVRRQDGRTILDIAVKTWETNNPYLVFPVPPNVKAAATAKSR
Ga0190265_1143023333300018422SoilRAEDLTDIKTPGRIVRRQGGRTILDLELKTAETNNPYLVFPVPPNVKTAASQSR
Ga0066655_1051301723300018431Grasslands SoilYSGYADHGEILTDIQSPGRIVQKQGGRTVLDIQIKTWESNNPYLIFPVPPNVKTVANSR
Ga0190274_1322000513300018476SoilVLSDIKSPGHIVRRQGGRTVLDIEVKTWESNNPYLVFPVPTNVKTATPANSR
Ga0210407_1066586413300020579SoilDHGEILTDIKSPGHMVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210399_1023342013300020581SoilPALTNLVTETEYSDYADHGEVLTDIKSPGHIVEKQGGKPFLDLQVKMVNANDPYLVFPVPPNVKSATTQASANTNK
Ga0210400_1158938923300021170SoilEIATDVKSPGHIVRKQGGHPVLDVQVKTWDANNPYLVFPVPENVKQAASH
Ga0210405_1023665713300021171SoilILTDIKSPGHVVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210405_1089871313300021171SoilVDHGEILTDIKSPGHIIQEQEGHPALDIHVTKVDANNPYLVFPVPENVKKAKTP
Ga0210405_1109454813300021171SoilVETRPDNPALTNLATETEYSDYADHGEVLTDIKSPGHIIEKQGGKPLLDLQVIMVNANDPYLVFPVPPNVKSATTQASAITSGRK
Ga0210405_1136997823300021171SoilLTDIKSPGHMVEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210397_1148224923300021403SoilTDIKSPGHIVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0210389_1065964623300021404SoilDYKDHGEIATDVMSPGHIRWKQGGHPVMDLQVKMLDANNPYLVFPVPENVKQAAAR
Ga0210383_1173312423300021407SoilYADHGEIATDVKSPGHIVRKQGGHLLLDIKVKMLDANNPYLVFPVPQNVKMAAAH
Ga0210398_1089231923300021477SoilDYADHGELLTDVKSPGHIVEKQAGRPVLDIRVKMVDANNPYLVFPVPPNVKAASATGK
Ga0210402_1185776223300021478SoilADHGEIATDVKSPGHIVRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKTAAH
Ga0210410_1167173823300021479SoilTETEYSDYADHGELLTDIKSPGHIVQKQTGHPLLDIQVKKVDANNPYLVFPVPENVKKPVAR
Ga0210409_1122174323300021559SoilDYADHGEILTDVKSPGHIVRKQSGHPLLDIQVKMLDANNPYLVFPVPENVKKAAAH
Ga0242642_103895023300022504SoilPDNPALTNLATETEYSDYADHGEVLTDIKSPGHIVEKQGGKLLLDLQVKMVNANDPYLVFPVPPNVKSATTQASAITSGRR
Ga0242660_103669713300022531SoilGEVLTDIKSPGHIVEKQGGKPLLDLQVIMVNANDPYLVFPVPPNVKSATTQASAITSGRK
Ga0242654_1033019913300022726SoilTNLVTETEYSDYADHGEVLTDIKSPGHIVEKQGGKPFLDLQVKMVNANDPYLVFPVPPNVKSATTQASANTPGAK
Ga0224564_102213313300024271SoilELLTETEYSDYADHGEILTDVKSPGHIVQKQGGHTVLDIQVKKVDANNPYLVFPVPENIKKAAVN
Ga0137417_143460413300024330Vadose Zone SoilGEILTDVKSPGHIVRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR
Ga0209109_1032441413300025160SoilTRVETRPDNPALATLATQTEFANYADRAEVLTDIKSPGRMIRKQGGRTLLDIDVKTWETNNPYLVFPVPPNVKTAAN
Ga0209108_1017400923300025165SoilVLTDIKTPGRIIRKQNGRMRTLLDVEVKTWETNNPYLVFPVPPNVKTAAPANSR
Ga0209640_1009167543300025324SoilVLTDIKTPGRIIRKQNGRTLLDVEVKTWETNNPYLVFPVPPNVKTAAPANSR
Ga0207649_1122692513300025920Corn RhizosphereEYSGYADHAEVLTDVKTPAHMVFKRGGRTVADITVKTWETNNPYLVFPVPPNVKAAPATTSR
Ga0207704_1099035023300025938Miscanthus RhizosphereHAEVLTDIKTPGHIVGKRDGRTVFDLTVKSWETNNPYLVFPVPPNVKAAATTSPTSR
Ga0207679_1199127223300025945Corn RhizosphereNLATETDYSDYADRAEVLTDIKTPGHIVRKQAGRTTLDITVKNWETNDPYLVFPVPVNVKSAPTPTSR
Ga0207677_1110532923300026023Miscanthus RhizosphereATETEYSDYADRGEVLTDIKSPGHIVRRQGGRPVLDIRVKMWEANNLYLVFPIPQNVKTAAAASSR
Ga0207648_1106325823300026089Miscanthus RhizosphereSDYADRAEVLTDIKTPGHIVRKQGGRTVLDIQVKTWETNDPYLVFPVPPNVKSAATR
Ga0209472_117763623300026323SoilSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANNPYLVFPVPGNVKAAATDSR
Ga0209801_130970113300026326SoilNLAFETEYSGYADHGEILTDIRSPGRIVRKQGGRTVLDIEVKLWEANNPYVVFPVPGNVKTAAGNSR
Ga0209267_112730213300026331SoilVTKVETTPDNSSLNNLATETEYSDYADHGEVLTDIKSPGHIVQKQAGRLVLDLQVKMVDANNPYFVFPVPPNVKAATSASARGTGGN
Ga0209057_121057013300026342SoilSGYRDHGEILTDIRSPGRIVRKQGGRTVLDIEVKMWEANDPYLVFPVPGNVKAAGADSR
Ga0209378_129222823300026528SoilALANMATETEYSGYADHGEVLTDIKSPGRIVKKQGGRPILDIQVSMWEANNPYLVFPVPPNVKTAASR
Ga0209003_102833723300027576Forest SoilLTDIKSPGHLIEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQESSKVAEK
Ga0209682_1016830523300027716Wetland SedimentVLTDIKTPGHIVRQQAGRTVLDITVKNWETNNLYLVFPVPANVKAATPASAR
Ga0209178_110179523300027725Agricultural SoilILTDVKSPGHIVEKQAGKPLLDLQVKMVNANDPYLVFPVPQNVKSAAASTSASATGRN
Ga0209060_1050675123300027826Surface SoilSKSLITKVESKPSNPSQTNLAREVEYSDYADHGEILTDMKSPGHIVEKEAGKPLLDLQVKMVNADNPYLVFPVPQNVKAAAATQTSASANTAK
Ga0209701_1039421123300027862Vadose Zone SoilYADHGEIPTDVKSPGHIVQKQGGHTLLDIQVKKVDANNPYLVFPVPENVKKAAAH
Ga0209579_1017476013300027869Surface SoilDHGDILTDIKSPGHIVQKQGATTLLDIQIKMWDANNPYLVFPVPPNVKKTGSQQSANRAQ
Ga0209590_1025899113300027882Vadose Zone SoilTEYSNYADRGEVLTDIKSPGHIVRKQSGRTILDIEVKTWETNNPYLVFPVPPSVKAATTGTSR
Ga0209590_1092623013300027882Vadose Zone SoilSDYADHAEVLTDIKTPGHVVRKQGGRTVLDIQIKSWETNDPYLVFPVPPNVKSAATR
Ga0209488_1003145463300027903Vadose Zone SoilHGEILTDVKSPGHIIRKQGGHPVLDIQVKMVDANNPYLVFPVPENVKKAAAR
Ga0308309_1020431113300028906SoilDILTDIKSPGRIVQKQGATTLLDIQIKMWDANNPYVVFPVPPNVKKTGTQQSANRAQ
Ga0311339_1159681113300029999PalsaTQTDNPAMGDLATEVDYSDYADHGEILTDVKSPGHIVEKKAGRTVLDIQIKTWDANNPYLVFPVPEVVKKAGA
Ga0307500_1031664923300031198SoilRAEVLTDIKTPGHMVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR
Ga0302324_10232930113300031236PalsaLATEVDYSDYADHGEILTDVKSPGHIVEKKAGRTVLDIQIKTWDANNPYLVFPVPEVVKKAGA
Ga0307408_10008497633300031548RhizosphereANNLVTRVETRSDNPALVTQTDYADYADRAEVLTDIKTPGRIVRRQGGRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR
Ga0307484_11708623300031663Hardwood Forest SoilYADHGEILTDIKSPGHVVEKQGGSTVLDIQIKNWDANNPYLVFPIPQNVKMATQQSSKVAER
Ga0310686_10861196233300031708SoilEILTDVKSPGHIVRKQNGHTVLDIKVKTLDANNPYLVFPVPENVKKAAAH
Ga0310686_11005956223300031708SoilADLNTETEYSDYADHGEILTDVKSPGHIVRKQNGHTVLDIKVKTLDANNPYLVFPVPADIKKVAAD
Ga0307476_1081100513300031715Hardwood Forest SoilDHGEVLTDIKSPGHIVEKQGGKPVLDLQVKMVNANDPYLVFPVPPNVKSATAQASANSSGSK
Ga0307474_1054852213300031718Hardwood Forest SoilLTGMATETEYSEYADHGEIATDVKSPGHIVRKQAGHPVLDLHVKMLDANNPYLVFPVPENVKKAAAQ
Ga0307469_1029995913300031720Hardwood Forest SoilANMAIEADYSDYADHAEVLTDIKTPGHIVRKQGGRTVLDIQIKSWETNDPYLVFPVPPNVKTAATR
Ga0307475_1041121723300031754Hardwood Forest SoilYADHGEILTDIKSPGHIVEKQGGSTVLDIQIKSWDANNPYLVFPIPQNVKMATQQSSKVAEK
Ga0307412_1023762023300031911RhizosphereEVLTDIKTPGRIVRRQGGRTVLDIEVKNWETNNPYLVFPVPPNLKAPAAANSR
Ga0310901_1034865523300031940SoilCTVEYSNYADHAEVLTDVQTPGRIVAKEGGRTVLDMTVKTWETNNPYLVFPVPPNVKAAPASTTSR
Ga0307479_1019089333300031962Hardwood Forest SoilVLTDIKSPGHIVEKRAGQAVLDLQVKMVDANDPYLVFPVPPNVKAATASASAGKTGGD
Ga0315281_1063962713300032163SedimentTRPDNPARVNLATQTEYSNYADRGEVLSDIKSPGHIVRRQGGRTLLDIEVKAWETNNPYLVFPVPPNVKTAATANSR
Ga0307470_1075683733300032174Hardwood Forest SoilYADRAEVLTDIKTPGHIVRKQGGRTVLDIQVKNWETNDPYLVFPVPSNVKSAATR
Ga0335085_1168760213300032770SoilDYADRAEVLTDIKTPGHIVRKEGGRTVLDIDVKTWETNNPYAVFPVPASVKASSSTPAR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.