Metagenome / Metatranscriptome Family F045246

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F045246
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	48 residues
Representative Sequence	LQPVVGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV
Number of Associated Samples	94
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.34 %
% of genes near scaffold ends (potentially truncated)	65.36 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.399 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.105 % of family members)
Environment Ontology (ENVO)	Unclassified (52.288 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.052 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.68% β-sheet: 0.00% Coil/Unstructured: 49.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF00805	Pentapeptide	3.92
PF00589	Phage_integrase	1.96
PF13676	TIR_2	1.96
PF13473	Cupredoxin_1	1.96
PF13683	rve_3	1.31
PF13531	SBP_bac_11	1.31
PF03807	F420_oxidored	1.31
PF00561	Abhydrolase_1	1.31
PF01068	DNA_ligase_A_M	0.65
PF04014	MazE_antitoxin	0.65
PF07508	Recombinase	0.65
PF12697	Abhydrolase_6	0.65
PF13936	HTH_38	0.65
PF02357	NusG	0.65
PF12681	Glyoxalase_2	0.65
PF01850	PIN	0.65
PF02620	YceD	0.65
PF13975	gag-asp_proteas	0.65
PF09335	SNARE_assoc	0.65
PF13518	HTH_28	0.65
PF05050	Methyltransf_21	0.65
PF02771	Acyl-CoA_dh_N	0.65
PF01569	PAP2	0.65
PF13458	Peripla_BP_6	0.65
PF12689	Acid_PPase	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	3.92
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.65
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.65
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.65
COG1399	23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria)	Translation, ribosomal structure and biogenesis [J]	0.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.65
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.05 %
Unclassified	root	N/A	35.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.40 %
Unclassified	root	N/A	35.95 %
Viruses	superkingdom	All Organisms → Viruses	0.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.40 %
Unclassified	root	N/A	35.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.33 %
Unclassified	root	N/A	35.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.87 %
Unclassified	root	N/A	35.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.31 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	10.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.54 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.27 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.31 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.65 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.65 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.65 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	10.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.27 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.31 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.65 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.65 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.65 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	10.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.27 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1.31 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.31 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.65 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.65 %
Mesorhizobium escarrei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium escarrei	0.65 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	8.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.27 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	1.96 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	1.31 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.65 %
Bradyrhizobium sp. AUGA SZCCT0160	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0160	0.65 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	0.65 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.65 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.65 %
Mesorhizobium escarrei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium escarrei	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.95 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	8.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.27 %
Rhizobium sp. SG570	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. SG570	1.96 %
Spirosoma validum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma validum	1.31 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.65 %
Bradyrhizobium sp. AUGA SZCCT0160	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0160	0.65 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	0.65 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.65 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.65 %
Mesorhizobium escarrei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium escarrei	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01ATMID	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
2170459018\|G1P06HT02FOX53	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
2189573005\|GZGK9D402F1CWS	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10081175	Not Available	812	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10136981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1093139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300000955\|JGI1027J12803_101048755	Not Available	962	Open in IMG/M
3300000956\|JGI10216J12902_119751274	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005332\|Ga0066388_100483685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1876	Open in IMG/M
3300005332\|Ga0066388_103937261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	757	Open in IMG/M
3300005332\|Ga0066388_103981607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	753	Open in IMG/M
3300005332\|Ga0066388_104388998	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300005332\|Ga0066388_108086025	Not Available	526	Open in IMG/M
3300005332\|Ga0066388_108202734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	521	Open in IMG/M
3300005363\|Ga0008090_15411747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1428	Open in IMG/M
3300005468\|Ga0070707_100606816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300005713\|Ga0066905_100019793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3545	Open in IMG/M
3300005713\|Ga0066905_100460520	Not Available	1048	Open in IMG/M
3300005713\|Ga0066905_102142080	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_100365648	All Organisms → cellular organisms → Bacteria → Proteobacteria	2345	Open in IMG/M
3300005764\|Ga0066903_102466362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1006	Open in IMG/M
3300005764\|Ga0066903_102792139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	947	Open in IMG/M
3300005764\|Ga0066903_102841141	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma validum	939	Open in IMG/M
3300005764\|Ga0066903_103274609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300005764\|Ga0066903_104161074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	774	Open in IMG/M
3300005764\|Ga0066903_105918094	Not Available	641	Open in IMG/M
3300005764\|Ga0066903_107824334	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma validum	549	Open in IMG/M
3300006175\|Ga0070712_101302334	Not Available	633	Open in IMG/M
3300006847\|Ga0075431_101169135	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300009137\|Ga0066709_102594972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	679	Open in IMG/M
3300009147\|Ga0114129_10658113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1351	Open in IMG/M
3300009792\|Ga0126374_10873566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	694	Open in IMG/M
3300009792\|Ga0126374_11157493	Not Available	617	Open in IMG/M
3300010038\|Ga0126315_10364333	Not Available	903	Open in IMG/M
3300010041\|Ga0126312_10245232	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300010043\|Ga0126380_11267384	Not Available	639	Open in IMG/M
3300010046\|Ga0126384_12276474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	523	Open in IMG/M
3300010048\|Ga0126373_10453592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1317	Open in IMG/M
3300010339\|Ga0074046_10006533	All Organisms → cellular organisms → Bacteria → Proteobacteria	9146	Open in IMG/M
3300010358\|Ga0126370_10357146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1183	Open in IMG/M
3300010358\|Ga0126370_10824680	Not Available	830	Open in IMG/M
3300010358\|Ga0126370_11478416	Not Available	645	Open in IMG/M
3300010360\|Ga0126372_11775789	Not Available	659	Open in IMG/M
3300010361\|Ga0126378_10325074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0160	1645	Open in IMG/M
3300010361\|Ga0126378_10834005	Not Available	1030	Open in IMG/M
3300010361\|Ga0126378_10857458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300010361\|Ga0126378_11415316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	787	Open in IMG/M
3300010361\|Ga0126378_12365113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	607	Open in IMG/M
3300010362\|Ga0126377_13239553	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_12757693	Not Available	588	Open in IMG/M
3300010376\|Ga0126381_100383784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1952	Open in IMG/M
3300010398\|Ga0126383_10472396	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300010403\|Ga0134123_12086667	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010868\|Ga0124844_1070932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300010868\|Ga0124844_1090532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300010937\|Ga0137776_1054338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2717	Open in IMG/M
3300012349\|Ga0137387_10612783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	789	Open in IMG/M
3300012353\|Ga0137367_11008291	Not Available	568	Open in IMG/M
3300012359\|Ga0137385_10324948	Not Available	1320	Open in IMG/M
3300012971\|Ga0126369_10771901	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300012971\|Ga0126369_11170119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	859	Open in IMG/M
3300012971\|Ga0126369_11937772	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012971\|Ga0126369_13557269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300012986\|Ga0164304_10806532	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300015371\|Ga0132258_10485318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3087	Open in IMG/M
3300015374\|Ga0132255_101442084	Not Available	1041	Open in IMG/M
3300016270\|Ga0182036_10053214	Not Available	2554	Open in IMG/M
3300016270\|Ga0182036_10958440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	704	Open in IMG/M
3300016294\|Ga0182041_10039441	Not Available	3106	Open in IMG/M
3300016294\|Ga0182041_11910443	Not Available	552	Open in IMG/M
3300016319\|Ga0182033_11123043	Not Available	702	Open in IMG/M
3300016319\|Ga0182033_11129190	Not Available	700	Open in IMG/M
3300016341\|Ga0182035_11068882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	717	Open in IMG/M
3300016341\|Ga0182035_11679197	Not Available	574	Open in IMG/M
3300016357\|Ga0182032_10088796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2147	Open in IMG/M
3300016357\|Ga0182032_10705729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	847	Open in IMG/M
3300016371\|Ga0182034_10311591	Not Available	1265	Open in IMG/M
3300016387\|Ga0182040_11261261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. SG570	623	Open in IMG/M
3300016404\|Ga0182037_10792041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	817	Open in IMG/M
3300016404\|Ga0182037_11530633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	592	Open in IMG/M
3300016422\|Ga0182039_11308706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	657	Open in IMG/M
3300016422\|Ga0182039_11399977	Not Available	635	Open in IMG/M
3300016422\|Ga0182039_11542523	Not Available	605	Open in IMG/M
3300016445\|Ga0182038_10968131	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300017970\|Ga0187783_10121721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1923	Open in IMG/M
3300017975\|Ga0187782_10623277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300021560\|Ga0126371_10575333	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300025922\|Ga0207646_10800250	Not Available	839	Open in IMG/M
3300027783\|Ga0209448_10316762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	510	Open in IMG/M
3300027873\|Ga0209814_10515737	Not Available	530	Open in IMG/M
3300028047\|Ga0209526_10101712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2023	Open in IMG/M
3300031543\|Ga0318516_10730719	Not Available	561	Open in IMG/M
3300031543\|Ga0318516_10811383	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031546\|Ga0318538_10653331	Not Available	570	Open in IMG/M
3300031546\|Ga0318538_10791067	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031573\|Ga0310915_10560930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	810	Open in IMG/M
3300031679\|Ga0318561_10074900	Not Available	1741	Open in IMG/M
3300031681\|Ga0318572_10604247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. SG570	653	Open in IMG/M
3300031713\|Ga0318496_10146411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1288	Open in IMG/M
3300031744\|Ga0306918_10176824	Not Available	1595	Open in IMG/M
3300031744\|Ga0306918_10957240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	666	Open in IMG/M
3300031747\|Ga0318502_10137548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1384	Open in IMG/M
3300031747\|Ga0318502_10516702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. SG570	716	Open in IMG/M
3300031763\|Ga0318537_10050569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1507	Open in IMG/M
3300031768\|Ga0318509_10532946	Not Available	655	Open in IMG/M
3300031771\|Ga0318546_10121349	Not Available	1737	Open in IMG/M
3300031771\|Ga0318546_10638046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300031780\|Ga0318508_1049495	Not Available	1108	Open in IMG/M
3300031781\|Ga0318547_10364198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	884	Open in IMG/M
3300031781\|Ga0318547_10408287	Not Available	834	Open in IMG/M
3300031782\|Ga0318552_10660332	Not Available	533	Open in IMG/M
3300031797\|Ga0318550_10072133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1591	Open in IMG/M
3300031797\|Ga0318550_10184583	Not Available	1007	Open in IMG/M
3300031833\|Ga0310917_10289920	All Organisms → Viruses → Predicted Viral	1106	Open in IMG/M
3300031833\|Ga0310917_11068838	Not Available	539	Open in IMG/M
3300031845\|Ga0318511_10250335	Not Available	795	Open in IMG/M
3300031846\|Ga0318512_10094648	Not Available	1397	Open in IMG/M
3300031879\|Ga0306919_11294219	Not Available	552	Open in IMG/M
3300031890\|Ga0306925_10360499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1561	Open in IMG/M
3300031890\|Ga0306925_11074401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300031890\|Ga0306925_11633967	Not Available	625	Open in IMG/M
3300031890\|Ga0306925_11989675	Not Available	549	Open in IMG/M
3300031910\|Ga0306923_10391714	Not Available	1582	Open in IMG/M
3300031910\|Ga0306923_10899615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300031910\|Ga0306923_12537158	Not Available	504	Open in IMG/M
3300031912\|Ga0306921_12164555	Not Available	587	Open in IMG/M
3300031941\|Ga0310912_11405368	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031942\|Ga0310916_10858402	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300031945\|Ga0310913_10045304	All Organisms → cellular organisms → Bacteria → Proteobacteria	2855	Open in IMG/M
3300031947\|Ga0310909_10657082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	873	Open in IMG/M
3300031947\|Ga0310909_10756729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300031947\|Ga0310909_11325521	Not Available	578	Open in IMG/M
3300031954\|Ga0306926_10304565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300031954\|Ga0306926_10306261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1966	Open in IMG/M
3300031954\|Ga0306926_11986408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium escarrei	654	Open in IMG/M
3300032001\|Ga0306922_10107063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2962	Open in IMG/M
3300032001\|Ga0306922_11179897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300032001\|Ga0306922_11515565	Not Available	670	Open in IMG/M
3300032001\|Ga0306922_11520729	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032035\|Ga0310911_10126144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	1425	Open in IMG/M
3300032039\|Ga0318559_10077552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1442	Open in IMG/M
3300032044\|Ga0318558_10425864	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300032052\|Ga0318506_10330567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	676	Open in IMG/M
3300032055\|Ga0318575_10692495	Not Available	515	Open in IMG/M
3300032064\|Ga0318510_10403795	Not Available	582	Open in IMG/M
3300032261\|Ga0306920_103638051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	567	Open in IMG/M
3300033289\|Ga0310914_10181719	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300033289\|Ga0310914_10218215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1707	Open in IMG/M
3300033289\|Ga0310914_11064341	Not Available	709	Open in IMG/M
3300033289\|Ga0310914_11169587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300033289\|Ga0310914_11350765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	615	Open in IMG/M
3300033289\|Ga0310914_11534862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.27%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.77%
Plants	Host-Associated → Plants	3.27%
Aquatic	Environmental → Aquatic	1.31%
Solid Waste	Engineered → Solid Waste	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.31%
Freshwater	Environmental → Aquatic → Freshwater	0.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Grass	Engineered → Solid Waste → Grass	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Loam	Environmental → Terrestrial → Soil → Loam	15.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Composting	Engineered → Solid Waste → Grass → Composting	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.65%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.65%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_02751240	2067725002	Soil	MFVDLQNKYDWVLQPVVGYPSIDRLIEVLEDKVVRPAEAKFNELLARRTQRLRVENV
2MG_00305130	2170459018	Switchgrass, Maize And Mischanthus Litter	MFVDLQNKYDWVLQPVIGYSSVGRLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV
FG3_09188620	2189573005	Grass Soil	MFVDLQNKYDWVLQPVVGYPSVERLIEVLEDKVVRPAEAKFNELLARWTNQLRVENIPA
AF_2010_repII_A1DRAFT_100811753	3300000597	Forest Soil	MVPFAPGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTNQLRVENV*
AF_2010_repII_A1DRAFT_101369811	3300000597	Forest Soil	VVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTQQLRVENV*
AF_2010_repII_A100DRAFT_10931391	3300000655	Forest Soil	VDRLIEVLEDKVVRPAEAKFNELLARRTQQLRVENV*
JGI1027J12803_1010487551	3300000955	Soil	VLQPVIRYPTVDRLIEVLKDEVIRPAEAKFNELLARRTNELRVKNV*
JGI10216J12902_1197512743	3300000956	Soil	VASTVLEDKVVRPAEAKFNELLARRTQQLRVENV*
Ga0066388_1004836853	3300005332	Tropical Forest Soil	VAVAYPPVDRLIEVLEDKVVRPAEAKFKRLLARRTNQLRVENV*
Ga0066388_1039372612	3300005332	Tropical Forest Soil	VLQPVVGYPSVDRLIEVLQDKVVRPAEAKFNELLARRTKLLRVENI*
Ga0066388_1039816072	3300005332	Tropical Forest Soil	VLQPVVGYTSVDRLIEDKIVRPSEAKFNELLERRMKQLRVEKV*
Ga0066388_1043889983	3300005332	Tropical Forest Soil	WVLQPVVGYPSVDRLIEVLEDEVVRPAEAKFNELIVRRTNELRVKNI*
Ga0066388_1080860252	3300005332	Tropical Forest Soil	PVIAYPTVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV*
Ga0066388_1082027342	3300005332	Tropical Forest Soil	WVLQPVVGYPSVDRLIEVLEDKIVDPPEAKFNELLARRANQLRVENV*
Ga0008090_154117471	3300005363	Tropical Rainforest Soil	PVVGYPSVDRLIEVLEDKIVGPVEAKFNELLARRTNQLRVENV*
Ga0070707_1006068162	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFVDLQNKYDWVLQDVIGYPSVDRLIEVLEDEVVKPAEAKFNELLARRTNQLRVKNV*
Ga0066905_1000197936	3300005713	Tropical Forest Soil	VPDTMVPFAPGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTNQLRVENV*
Ga0066905_1004605204	3300005713	Tropical Forest Soil	RLIEVLEDKVVRPAEAKFNELLARRTQQLRVENV*
Ga0066905_1021420801	3300005713	Tropical Forest Soil	VLDLQNRYDWVFDVIEYPSVNRLIEVFEVEIVQPAEAKFDELTRRTKQLRVKNI*
Ga0066903_1003656483	3300005764	Tropical Forest Soil	MFVDLQNMYDWVLRPVVRYPSVDRLIEVLEDKVVRPAEAKFRRLLTRRTKRLRVENV*
Ga0066903_1024663623	3300005764	Tropical Forest Soil	DWVLKDVIVYPSVDRLIEVLEREIIGPAEAKFSELLSRRTEQLRLKKV*
Ga0066903_1027921393	3300005764	Tropical Forest Soil	VLQPVLGYPSVERLIEVLEDEVVRPAEAKFNELLARRTNELRVKNI*
Ga0066903_1028411413	3300005764	Tropical Forest Soil	VLQPVVGYPSVERLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV*
Ga0066903_1032746092	3300005764	Tropical Forest Soil	MPELPSHRSPNDWVFQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTTRLRVENV*
Ga0066903_1041610742	3300005764	Tropical Forest Soil	VVGYPSVDRLIEVLEDKVVRTAEAKFNELLARRTNQLRVENV*
Ga0066903_1059180943	3300005764	Tropical Forest Soil	QNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV*
Ga0066903_1078243342	3300005764	Tropical Forest Soil	VVGYPSVERLIEVLEDKIVRPAEAKFNELLAQRTKVLRVENV*
Ga0070712_1013023343	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VLKPVIGYSSIDRLLAVLENKIVRRAEAKFNELLARRTEQLRVENV*
Ga0075431_1011691353	3300006847	Populus Rhizosphere	DLQNKYDWVLQPVIEYPSVDRLIEVLKDEIVSPAEAKFDELLARRTDELRVKKV*
Ga0066709_1025949722	3300009137	Grasslands Soil	VQKAPSTSVDRLMEVVEEKIVKPAEAKFNELLARRTKQLRVEAV*
Ga0114129_106581134	3300009147	Populus Rhizosphere	RLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV*
Ga0126374_108735662	3300009792	Tropical Forest Soil	VGYPSVERLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV*
Ga0126374_111574931	3300009792	Tropical Forest Soil	VLKPVIGYPSFDRLIEVLEDKIVRPAESKFNQLLARRTEQLRVESV*
Ga0126315_103643331	3300010038	Serpentine Soil	LQNKYDWVLKPVMKYSSVDRLIERLEVKIVRRAEAKFNKLLARRTKQFRVENI*
Ga0126312_102452322	3300010041	Serpentine Soil	MFVDLQNKYDWVLQPVIRYPSVDRPIEVLEDKVVRPAEAKFNELLGRRTRQLRVENV*
Ga0126380_112673841	3300010043	Tropical Forest Soil	PVVGYPSVDRLIEVLEYEVVRPAEAKFNELLARRTNELRVKNIRA*
Ga0126384_122764742	3300010046	Tropical Forest Soil	MMISLRRRLIEVLEDKIVRPAEAKFNELLARRTNQLRVENV*
Ga0126373_104535923	3300010048	Tropical Forest Soil	MFAGLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV*
Ga0074046_100065335	3300010339	Bog Forest Soil	VLKPVIGYPSVDRLLEVLEDEVIRPAETKFNELLERRTHQLRIKNV*
Ga0126370_103571462	3300010358	Tropical Forest Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKQLRVENV*
Ga0126370_108246801	3300010358	Tropical Forest Soil	KYDWVLKDVIVYPSVDRLIEVLEHEIIGPAEAKFSELLSRRTEQLRLKKV*
Ga0126370_114784162	3300010358	Tropical Forest Soil	VGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTNQLRVENV*
Ga0126372_117757891	3300010360	Tropical Forest Soil	KYDWVLQPVVGYPSVERLIEVLEDEIVRPAEAKFNELLARRTNELRVKNI*
Ga0126378_103250742	3300010361	Tropical Forest Soil	MMISLRRRLIEVLEDKIVRPAEAKFNELLARRSNQLRVENI*
Ga0126378_108340052	3300010361	Tropical Forest Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDEVVRPAEAMFDKLLLRRTNELRVKKV*
Ga0126378_108574581	3300010361	Tropical Forest Soil	VVGYSLVDRLIEVLEDKIVRPAEAKFNELLARRTNQLRVETV*
Ga0126378_114153161	3300010361	Tropical Forest Soil	SDADWVLQPVVGYPSVERLIEVLEDKIVRPAEAKFNELLARRTKQLRIKNV*
Ga0126378_123651131	3300010361	Tropical Forest Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRANQLRVDNV*
Ga0126377_132395531	3300010362	Tropical Forest Soil	MVPFAPGYPSVDRLIEVLEDKIVRPAEAKFNELLKDRTEQLRVENV*
Ga0126379_127576932	3300010366	Tropical Forest Soil	WVLTVIRYPSVERLIDVLEEKIVRSAEAKFNQLLARRTKQLRVESV*
Ga0126381_1003837841	3300010376	Tropical Forest Soil	MFADLQNEYDWVLKPAIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV*
Ga0126383_104723964	3300010398	Tropical Forest Soil	YPSVDRLIEVLEREIIGPAEAKFSELLSRRTEQLHLKKV*
Ga0134123_120866671	3300010403	Terrestrial Soil	MFVDLQNRYDWVLKPVIGYSSVDRLMEVLEDKIVRPAEVKFNELLARRTEQLRVENV*
Ga0124844_10709323	3300010868	Tropical Forest Soil	ADCGCPCSGQGGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV*
Ga0124844_10905322	3300010868	Tropical Forest Soil	PCSGQGGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV*
Ga0137776_10543382	3300010937	Sediment	MFADLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV*
Ga0137387_106127831	3300012349	Vadose Zone Soil	MFVELQNKYDWVLQDVIGYPSVDRLIAVLEDEVVKPAEAKFNELLAR
Ga0137367_110082911	3300012353	Vadose Zone Soil	QPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKQLRVENV*
Ga0137385_103249483	3300012359	Vadose Zone Soil	DRLIEVLEEKIVRPAETKFNELLVRRTRQLRVENV*
Ga0126369_107719011	3300012971	Tropical Forest Soil	KPVIIYPSVSRLIDVFEDRIVRPAETKFNELLTRRTEQLRVEKV*
Ga0126369_111701191	3300012971	Tropical Forest Soil	LWGRGFEHLQGKYDWVLKPVVGYPLVDRLIEVLEDKVVRPAEAKFNELLARRTKQLRVENV*
Ga0126369_119377721	3300012971	Tropical Forest Soil	IGYPSVDRLIEVLEDKIVRPAKAKFNELLARRTKQLRVENV*
Ga0126369_135572692	3300012971	Tropical Forest Soil	SLCSAAGRRGGVAVAYPPVDRLIEVLEDKVVRPAEAKFKRLLARRTNQLRVENV*
Ga0164304_108065322	3300012986	Soil	VLKPVIGYSSVDRLIVVWDYNIIRPAEAKFNELLARRTEQLRVENV*
Ga0132258_104853184	3300015371	Arabidopsis Rhizosphere	WVLPVIRYSSIDRLIEVLEDKIVMPAEAKFNQLLARRTKQLRVEIV*
Ga0132255_1014420841	3300015374	Arabidopsis Rhizosphere	AMFVDLQNKYDWVLQPVIEYPSGDRLIEVLKDEIVIPAEAKFDELLARRTNQLRTKKV*
Ga0182036_100532141	3300016270	Soil	QPVVGYPSVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0182036_109584401	3300016270	Soil	DWVLKPVIGYSSVDRLIEVLEDKVVKPAGAMFNELLTRRTKQLRVENV
Ga0182041_100394419	3300016294	Soil	SVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0182041_119104431	3300016294	Soil	DLQNKYDWVLQPVVGYPSVDRLIEVLEDEVIRPAEAKFNELLSRRTNELRVKNI
Ga0182033_111230432	3300016319	Soil	VGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTNQLRVENV
Ga0182033_111291902	3300016319	Soil	VDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0182035_110688821	3300016341	Soil	MFVDFQNKYDWVLRDVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTK
Ga0182035_116791971	3300016341	Soil	NKYDWVLQPIFSYPSVERLIEGLEDKIVRPAEAKFNELQARRTKQLRVESV
Ga0182032_100887961	3300016357	Soil	SYPSVERLIEGLEDKIVRPAEAKFNELQARRTKQLRVESV
Ga0182032_107057291	3300016357	Soil	VGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0182034_103115914	3300016371	Soil	PSVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0182040_112612613	3300016387	Soil	LQPVVGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV
Ga0182037_107920412	3300016404	Soil	MATFVDQQNKYDWVPVIGYRSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV
Ga0182037_115306332	3300016404	Soil	VLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0182039_113087063	3300016422	Soil	VDRLIEVLEHKVVRPAEAKFNELLARRTKLLRVEN
Ga0182039_113999772	3300016422	Soil	DLQNKYDWVLQPVVGYPSVDRLIEVLEIEVVRPAEAKFNELLERRTNQLRVENV
Ga0182039_115425232	3300016422	Soil	NKYDWVLQPVVGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTNQLRVENV
Ga0182038_109681311	3300016445	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLL
Ga0187783_101217214	3300017970	Tropical Peatland	MFADLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV
Ga0187782_106232773	3300017975	Tropical Peatland	MFADLQNEYDWVLKLETAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV
Ga0126371_105753332	3300021560	Tropical Forest Soil	MATFVDQQNKYDWVPVIGYPSVDRLIAVLEDKIVRPAEAKSNELLTRRTKQLRVENV
Ga0207646_108002502	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFVDLQNKYDWVLQDVIGYPSVDRLIEVLEDEVVKPAEAKFNELLARRTNQLRVKNV
Ga0209448_103167621	3300027783	Bog Forest Soil	DWVLQPVVGYHSVERLVEALEDRVVRPAEAKFNELLTRRTNQLRVENI
Ga0209814_105157371	3300027873	Populus Rhizosphere	FVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTNQLRVKNV
Ga0209526_101017121	3300028047	Forest Soil	DRLIEVLEDKVIRPAEEKFNQLLARRTNQLRVENV
Ga0318516_107307192	3300031543	Soil	PVVGYPSVDRLIEVLEDKVVKPAEAKFNELLARRTEQLRVENV
Ga0318516_108113831	3300031543	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0318538_106533311	3300031546	Soil	NKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNQLLARRAEQLRVENV
Ga0318538_107910672	3300031546	Soil	VLQPVVGYPSVDRLIEMLEDKVVRPAEAKFNELLGAADQQLRVENT
Ga0310915_105609302	3300031573	Soil	MFVDFQNKYDWVLRDVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0318561_100749002	3300031679	Soil	VVGYPSVDRLIEVLEDKVVRPAEAKFNEPLARRTKLLRVENV
Ga0318572_106042473	3300031681	Soil	NKYDWVLQPVVGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV
Ga0318496_101464112	3300031713	Soil	EQIHRVLQPVVGYPSVDRLIEMLEDKVVRPAEAKFNELLGAADQQLRVENT
Ga0306918_101768245	3300031744	Soil	LQNKYDWVLQPVVGYPLVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0306918_109572401	3300031744	Soil	VLQPVVGYRSVERLIEVLEDAVVRPAEAKFNELLARRTKLLRVENV
Ga0318502_101375484	3300031747	Soil	YPSVERLIEGLEDKIVRPAEAKFNELQARRTKQLRVESV
Ga0318502_105167023	3300031747	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVENV
Ga0318537_100505691	3300031763	Soil	QNKYDWVLQPIFSYPSVERLIEGLEDKIVRPAEAKFNELQAPRTKQLRVESV
Ga0318509_105329463	3300031768	Soil	KYDWVLQPVVGYPSVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0318546_101213495	3300031771	Soil	DRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0318546_106380462	3300031771	Soil	VLQPVDGYPSVDRLIEVLEDKVVGPAEAKFNELLARRTKQLRVEKV
Ga0318508_10494953	3300031780	Soil	LVDLQNKYDWVLQPIFSYPSVERLIEGLEDKIVRPAEAKFNELQARRTKQLRVESV
Ga0318547_103641982	3300031781	Soil	MFVDLQNKYDWVLQPVVGYPSVERLIEVLEDKVVRPAEAKFNELLARRTKLLCVENV
Ga0318547_104082874	3300031781	Soil	IRYPSVDRLIEVLKDKIVRPAEKKFNKLVARRTKRLRVENV
Ga0318552_106603322	3300031782	Soil	DWVLQPIFSYPSVERLIEGLEDKIVRPAEAKFNELQAPRTKQLRVESV
Ga0318550_100721331	3300031797	Soil	MFVDFQNKYDWVLRDVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLL
Ga0318550_101845831	3300031797	Soil	SVDRLIEVLEDKVVKPAEAKFNELLTRRTKQLRVENV
Ga0310917_102899201	3300031833	Soil	DSVLKPVIGYSSVDRLIEVLEDKVVKPAEAMFNELLTQRTKQLRVENV
Ga0310917_110688381	3300031833	Soil	SMFVDLQNKYDWVLQPVVGYPSVDRLVEVLEEKVVRPAEAKFNELLARRTKLLRVENV
Ga0318511_102503353	3300031845	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRRAEAKFNELLARRTKRLRVENV
Ga0318512_100946481	3300031846	Soil	VIGYSSVDRLIEVLEDKVVKPAEAKFNELLTRRTKQLRVENV
Ga0306919_112942191	3300031879	Soil	PMATFVDQQNKYDWVPVIGYPSVDRLIAVLEDKIVRPAEAKSNELLTRRTKQLRVENV
Ga0306925_103604995	3300031890	Soil	MFADLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAK
Ga0306925_110744011	3300031890	Soil	YDWVPVIGYPSVDRLIAVLEDKIVRPAEAKSNELLTRRTKQLRVENV
Ga0306925_116339671	3300031890	Soil	DRLIEVLEDKVVRPAEAKFNQLLARRTNQLRVENV
Ga0306925_119896752	3300031890	Soil	MPELPSHRSPNDWVLQPVDGYPSVDRLIEVLEDKVVGPAEAKFNELLARRTKQLRVEKV
Ga0306923_103917141	3300031910	Soil	VVGYPSVERLIGLEDEVVRPAEAKFNELLERRTKRLRVENV
Ga0306923_108996151	3300031910	Soil	MFADLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQFRIEKV
Ga0306923_125371583	3300031910	Soil	SVDRLVEVLEEKVVRPAEAKFNELLTRRTKLLRVENV
Ga0306921_121645551	3300031912	Soil	QSPTLCDFRKPSNLQNKYDWVLKPVIGYPSVDRLIEVPEDKIVRPAEVKFNELLARRTKQFRVANV
Ga0310912_114053681	3300031941	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEIEVVRPAEAKFNELLARRTNELRVKNV
Ga0310916_108584021	3300031942	Soil	YDWVLQPVVGYPSVDRLIEVLEIEVVRPAEAKFNELLARRTNELRVKNV
Ga0310913_100453041	3300031945	Soil	PIFSYPSVERLIEGLEDKIVRPAEAKFNELQAPRTKQLRVESV
Ga0310909_106570823	3300031947	Soil	KPVIGYSSVDRLIEVLEDKVVKPAGAMFNELLTRRTKQLRVENV
Ga0310909_107567291	3300031947	Soil	SHSLDRLIEVLEDKIIRSAEAKFNELLARRTKQLRVENV
Ga0310909_113255211	3300031947	Soil	QPVVGYPSVDRLIEVLEDKVVRPAEAKFNQLLARRAEQLRVENV
Ga0306926_103045653	3300031954	Soil	MLADLQNEYDWVLKPVIAYPSVDRLIEVLEDKIVEPAKAKFNQLLARRSEQLRIEKV
Ga0306926_103062611	3300031954	Soil	VDRLIEVLEDKVVKPAEAMFNELLTRRTKQLRVENV
Ga0306926_119864082	3300031954	Soil	VLQPAVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0306922_101070636	3300032001	Soil	DLQNRYDWVLKPVIGYSSVDRLIEVLEDKVVKPAEAMFNELLTQRTKQLRVENV
Ga0306922_111798971	3300032001	Soil	VDRLIEVLEDKIVRPAEAKFNELLARRTKQLRVDNV
Ga0306922_115155651	3300032001	Soil	NKYDWVLQPVIGYSSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLSVEKV
Ga0306922_115207291	3300032001	Soil	MFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKQLRVEN
Ga0310911_101261444	3300032035	Soil	DWVLRDVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0318559_100775524	3300032039	Soil	MLVDLQNKYDWVLQPIFSYPSVERLIEGLEDKIVRPAEAKFNELQAPRTKQLRVESV
Ga0318558_104258641	3300032044	Soil	SQMFVDLQNKYDWVLQPVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0318532_102452562	3300032051	Soil	VVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKL
Ga0318506_103305671	3300032052	Soil	MFVDFQNKYDWVLRDVVGYPSVDRLIEVLEDKVVRPAEAKFNELLARRTKL
Ga0318575_106924951	3300032055	Soil	SVNRLIEVLEDKVVRPAEAKFNELLARRTKLLRVENV
Ga0318510_104037951	3300032064	Soil	KYDWVLQPAVGYPSVDRLIEVLEDKVIRPAEAKFNELLARRTNQLRVENV
Ga0306920_1036380511	3300032261	Soil	VLQPVVGYPSVERLIGLEDEVVRPAEAKFNELLERRTKRLRVENV
Ga0310914_101817193	3300033289	Soil	FVDLQNKYDWVLQPVIGYSSVDRLIEVLEDKIVRPAEAKFNELLARRTKQLSVEKV
Ga0310914_102182151	3300033289	Soil	FVDLQNKYDWVLRPVVRYPSVDRLIEVLEDKVVRRAEAKFNKLLARRNKRLRVENV
Ga0310914_110643411	3300033289	Soil	SVERLIEGLEDKIVRPAEAKFNELQARRTKQLRVESV
Ga0310914_111695872	3300033289	Soil	PTRNRVSHSLDRLIEVLEDKIIRSVEAKFNELLARRTKQLRVENV
Ga0310914_113507651	3300033289	Soil	ADLQNKYDWVLQPVVGYPSVDRLIEVLEHKVVRPAEAKFNELLARRTKLLRVEN
Ga0310914_115348621	3300033289	Soil	YSSVDRLMEVFEEKIVRPAEAKFNQLLARRTKQLRVENV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045246

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences