Metagenome / Metatranscriptome Family F045203

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045203
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	57 residues
Representative Sequence	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIA
Number of Associated Samples	131
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.21 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	87.58 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.386 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.876 % of family members)
Environment Ontology (ENVO)	Unclassified (30.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.57% β-sheet: 0.00% Coil/Unstructured: 46.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF03401	TctC	81.05
PF02423	OCD_Mu_crystall	7.84
PF01546	Peptidase_M20	2.61
PF07883	Cupin_2	1.31
PF02776	TPP_enzyme_N	0.65
PF13249	SQHop_cyclase_N	0.65
PF01636	APH	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	81.05
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	7.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.70 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.05 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	75.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.23 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.16 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.96 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.16 %
Unclassified	root	N/A	2.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.16 %
Unclassified	root	N/A	2.61 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.16 %
Unclassified	root	N/A	2.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JO55Z	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
2088090014\|GPIPI_16932059	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
2228664021\|ICCgaii200_c0904274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1083407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300000732\|JGI12023J11887_1005329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10087711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300000890\|JGI11643J12802_10602974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300000890\|JGI11643J12802_11818186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300001283\|JGI11804J14045_102946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300001661\|JGI12053J15887_10265972	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300001686\|C688J18823_10493701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300001867\|JGI12627J18819_10065727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1509	Open in IMG/M
3300002070\|JGI24750J21931_1045786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300004463\|Ga0063356_103708467	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005165\|Ga0066869_10079079	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005332\|Ga0066388_107681830	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005332\|Ga0066388_107759082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300005335\|Ga0070666_11142111	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005436\|Ga0070713_100161463	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300005437\|Ga0070710_10256795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300005440\|Ga0070705_100553232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300005456\|Ga0070678_102263998	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005471\|Ga0070698_100467723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1197	Open in IMG/M
3300005713\|Ga0066905_100466984	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005713\|Ga0066905_100708129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300005713\|Ga0066905_100761315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300005713\|Ga0066905_101638356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300005718\|Ga0068866_10951618	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005764\|Ga0066903_102661861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300006041\|Ga0075023_100562155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300006177\|Ga0075362_10784132	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006797\|Ga0066659_11920086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300006845\|Ga0075421_102130010	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300006846\|Ga0075430_100082539	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300006847\|Ga0075431_101414508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300006847\|Ga0075431_101773550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300006854\|Ga0075425_102088140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300006871\|Ga0075434_101600133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300006954\|Ga0079219_11363835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300006969\|Ga0075419_10556740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300009012\|Ga0066710_104817728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300009088\|Ga0099830_10102795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2135	Open in IMG/M
3300009088\|Ga0099830_11799892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300009093\|Ga0105240_12716749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300009100\|Ga0075418_10881995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300009143\|Ga0099792_10260963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300010043\|Ga0126380_11328231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300010046\|Ga0126384_11132931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300010046\|Ga0126384_11341530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300010048\|Ga0126373_11471201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300010048\|Ga0126373_12159523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300010048\|Ga0126373_12642876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300010321\|Ga0134067_10073540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300010358\|Ga0126370_11234995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300010358\|Ga0126370_12660608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010361\|Ga0126378_12874015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010371\|Ga0134125_10967026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300010373\|Ga0134128_10400280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1533	Open in IMG/M
3300010373\|Ga0134128_10831807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300010376\|Ga0126381_101089774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1154	Open in IMG/M
3300010376\|Ga0126381_104895501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300010403\|Ga0134123_11711090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300011119\|Ga0105246_12435318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300011269\|Ga0137392_10668096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	861	Open in IMG/M
3300012212\|Ga0150985_113111275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300012356\|Ga0137371_10408063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300012357\|Ga0137384_10635851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	869	Open in IMG/M
3300012910\|Ga0157308_10290971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300012948\|Ga0126375_11064054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300012971\|Ga0126369_12266564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300012986\|Ga0164304_10661913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300015242\|Ga0137412_10422902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300015245\|Ga0137409_11525534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300015374\|Ga0132255_104188582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300016270\|Ga0182036_11578817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300016319\|Ga0182033_10969997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300016357\|Ga0182032_10227809	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300016387\|Ga0182040_10467589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300016404\|Ga0182037_11967296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300016404\|Ga0182037_12134131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300018081\|Ga0184625_10030024	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300018468\|Ga0066662_11923932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300018482\|Ga0066669_10022485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3559	Open in IMG/M
3300019356\|Ga0173481_10496120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300020170\|Ga0179594_10268184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300021170\|Ga0210400_10956634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300021377\|Ga0213874_10137700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300021560\|Ga0126371_12514042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300024288\|Ga0179589_10589627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300025885\|Ga0207653_10166245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300025926\|Ga0207659_10136462	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300025931\|Ga0207644_10070985	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300025981\|Ga0207640_11882372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300026310\|Ga0209239_1361078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300026547\|Ga0209156_10258474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300027073\|Ga0208366_1034769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300027310\|Ga0207983_1040256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300027873\|Ga0209814_10276696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300027909\|Ga0209382_11428283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300027909\|Ga0209382_12247366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300027993\|Ga0247749_1043344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300028799\|Ga0307284_10346609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300028885\|Ga0307304_10364919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300031198\|Ga0307500_10025995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1295	Open in IMG/M
3300031226\|Ga0307497_10153007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300031421\|Ga0308194_10015578	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300031474\|Ga0170818_100309162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300031543\|Ga0318516_10753357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031546\|Ga0318538_10012965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3526	Open in IMG/M
3300031549\|Ga0318571_10391946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300031572\|Ga0318515_10300903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300031573\|Ga0310915_10354387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300031679\|Ga0318561_10018224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3217	Open in IMG/M
3300031723\|Ga0318493_10288782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300031744\|Ga0306918_11060379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031764\|Ga0318535_10044270	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300031768\|Ga0318509_10704251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300031778\|Ga0318498_10424200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300031780\|Ga0318508_1011690	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300031782\|Ga0318552_10140921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300031793\|Ga0318548_10095438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1419	Open in IMG/M
3300031793\|Ga0318548_10653064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031819\|Ga0318568_10006574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5771	Open in IMG/M
3300031821\|Ga0318567_10262530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300031833\|Ga0310917_10002464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	9032	Open in IMG/M
3300031846\|Ga0318512_10206651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	961	Open in IMG/M
3300031854\|Ga0310904_11315179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031858\|Ga0310892_11253794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031860\|Ga0318495_10090577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1373	Open in IMG/M
3300031879\|Ga0306919_11174807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031890\|Ga0306925_10276408	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300031912\|Ga0306921_10016610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7998	Open in IMG/M
3300031942\|Ga0310916_10626219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300031942\|Ga0310916_10852784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300031942\|Ga0310916_11257069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031946\|Ga0310910_11041657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300031954\|Ga0306926_10024474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	7009	Open in IMG/M
3300031954\|Ga0306926_12366400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300032009\|Ga0318563_10169994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1172	Open in IMG/M
3300032042\|Ga0318545_10010304	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300032042\|Ga0318545_10250038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300032051\|Ga0318532_10086419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300032060\|Ga0318505_10034267	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300032065\|Ga0318513_10030281	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300032065\|Ga0318513_10043169	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300032065\|Ga0318513_10272322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300032067\|Ga0318524_10579088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300032091\|Ga0318577_10132902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1179	Open in IMG/M
3300033290\|Ga0318519_10975602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	17.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.39%
Plants	Host-Associated → Plants	17.65%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Sediment	Environmental → Aquatic → Sediment	1.96%
Roots	Host-Associated → Plants → Roots	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.63%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.31%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.31%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.31%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001283	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03734990	2065487018	Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGISVEQVRRRGARDGSIP
GPIPI_02783340	2088090014	Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILL
ICCgaii200_09042741	2228664021	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTLTV
AF_2010_repII_A100DRAFT_10834072	3300000655	Forest Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYHLPFDARLFPIVIGSAGILLTLGIAVEQVRRRGA
JGI12023J11887_10053291	3300000732	Forest Soil	MNARARSFWREEIALVALLFAFFAGIVCFALPLPFDARLFPLVIGGAGILLTLAIAAVE
AF_2010_repII_A001DRAFT_100877112	3300000793	Forest Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYHLPFDARLFPIVIGSAGILLTLGIAVEQVRRRGARDASMVD
JGI11643J12802_106029741	3300000890	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTLTVALAQV
JGI11643J12802_118181861	3300000890	Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGISVEQVRRRGARDGSIPRNE
JGI11804J14045_1029461	3300001283	Forest Soil	MNARARSFWREEIALVALLFAFFAGIVCFALPLPFDARLFPLVIGGAGILLTLAIAAV
JGI12053J15887_102659721	3300001661	Forest Soil	MSTDTKVKSYRREEFALIALLLLFFIGIVAFSYNLPFDARLFPLIIGIAGLSSHTCDR
C688J18823_104937012	3300001686	Soil	MLIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQV
JGI12627J18819_100657273	3300001867	Forest Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAG
JGI24750J21931_10457862	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQV
Ga0063356_1037084672	3300004463	Arabidopsis Thaliana Rhizosphere	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAIEQVRRRGARDA
Ga0066869_100790791	3300005165	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCA
Ga0066388_1076818302	3300005332	Tropical Forest Soil	MSTDSRGYWREELALIALLLLFFIAIVALSYPLPFDARLFPLVIGSAGILLTLGIAIEQM
Ga0066388_1077590821	3300005332	Tropical Forest Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYHLPFDARLFPLVI
Ga0070666_111421112	3300005335	Switchgrass Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTLTVALAQVRRR
Ga0070713_1001614631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDSRGYWREELTLIAILLAFFIGIVVLSYHLPFDARLFPLVIGTAGILLTLGIAIEQVRRRGARDA
Ga0070710_102567952	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLF
Ga0070705_1005532322	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDSRGYWREEFALIAILLAFFIGIVALSHHLPFDARLFPLVIGTA
Ga0070678_1022639981	3300005456	Miscanthus Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGI
Ga0070698_1004677232	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSIDTRARSYWREEFALIALLLLFFIGIVTFSYNTPFDARLFPLIIGGAGIVLTLLIGVEQVGLCRS
Ga0070672_1008019241	3300005543	Miscanthus Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQVRR
Ga0066905_1004669841	3300005713	Tropical Forest Soil	MSTDSRGYWREEFSLIAILLVFFVGIVALSYRIPFDARLFPLVIGSAGILLTLAIAIEQV
Ga0066905_1007081292	3300005713	Tropical Forest Soil	MSTDDRGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIIGTAGILLMLGIGIEQLRRRRARD
Ga0066905_1007613151	3300005713	Tropical Forest Soil	MSTDSRGYWREELSLIALLLLFFIGIVALSYPLPFDARLFP
Ga0066905_1016383561	3300005713	Tropical Forest Soil	MSSDARISGYWREEFSLIAVLLLFFAGIVAFSFKNPFDARLFPLVIGTAGILL
Ga0068866_109516181	3300005718	Miscanthus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTL
Ga0066903_1026618612	3300005764	Tropical Forest Soil	MSREPPAQLPQLRAYVREEWVLIALLLAFFLGIIVLAVGIPFDARLFPLVVGGAGILFTLAI
Ga0075023_1005621552	3300006041	Watersheds	MDARARNFWREELALVGLLLLFFAGIVGFSFQSPFDARLFPLVVGGAGILLTLGIAASVLGR
Ga0075362_107841322	3300006177	Populus Endosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVVFGYSLPFDARLFPLIIGCAGIV
Ga0075366_108147822	3300006195	Populus Endosphere	MSIDARMRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQVRRHR
Ga0066659_119200861	3300006797	Soil	MSTDCRRYWREEFFLIAILLSFFVAIVALSYHVPLDARLFPVVIGSAGILLTIGLAVEQMRGRGADDAPVVGE
Ga0075421_1021300101	3300006845	Populus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGIAAEQVRRRGARDGSTPRNEEHVV
Ga0075430_1000825394	3300006846	Populus Rhizosphere	MVPDSRVSGYWREEFSLIAVLLLFFAGIVVFSFKNPFDARLFPLVIG
Ga0075431_1014145082	3300006847	Populus Rhizosphere	MSADSKARSFWREEFSLIAVLLCFFIGIIAFVYKTPFDARLFPLVIGSAGILLTLVIAAEQLRRRHADETSVLDESDPASKPG
Ga0075431_1017735502	3300006847	Populus Rhizosphere	MSTDSRGYWREEFALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTL
Ga0075425_1020881401	3300006854	Populus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLI
Ga0075434_1016001332	3300006871	Populus Rhizosphere	MAADANIRSYWREEFALVALLLIFFIGIVGFSYNTPFDARLFPVIVGVAGIALTLFIAVEQVRLCRLNASAAV
Ga0079219_113638352	3300006954	Agricultural Soil	MSNDSRRYWREEFSLIAILLSFFVAIVALSYHVPFDARLFPIVIGSAGILLTAGLAV
Ga0075419_105567402	3300006969	Populus Rhizosphere	MPVDTRAREYRREELALIAILLVFFVAIVAFAVSLSFDARLFPLIIGGAGILLSLGVAV
Ga0066710_1048177281	3300009012	Grasslands Soil	MPNDIRMRGYRREEFALIAILLAYFIGIVAFSLNVPFDARLFPQVIGGAGILLMLAVGIERL
Ga0099830_101027953	3300009088	Vadose Zone Soil	MSIDSRGYWREELALIAILLAFFIGIVALSYHLPF
Ga0099830_117998922	3300009088	Vadose Zone Soil	MSNNARIRGYWREELALIALLFFFFIGIVALSFNNPFDARLFPIVIGSAGILLTLVIAIEQLRRRRAGDAS
Ga0105240_127167492	3300009093	Corn Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQVR
Ga0075418_108819951	3300009100	Populus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARL
Ga0099792_102609632	3300009143	Vadose Zone Soil	MSTDSRGYWQEELALIAILLVFFIGIVALSYHLPFDARLFPLIIGTAGILLTLGIAIEQ
Ga0126380_113282311	3300010043	Tropical Forest Soil	MSTDDRGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIIGTAGILLMLGIGIEQLRRRRALDASTLE
Ga0126384_111329311	3300010046	Tropical Forest Soil	MSTDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIEQMRGR
Ga0126384_113415301	3300010046	Tropical Forest Soil	MSGDARTREYRREELALIAILLVFFVAIVAFAVSLPFDARLFPLIIGSAGILLSLGVAL
Ga0126373_114712011	3300010048	Tropical Forest Soil	MSTDSRGYWREEFFLIAILLVFFVGIVALSYHIPFDARLFPLVIGSAG
Ga0126373_121595231	3300010048	Tropical Forest Soil	MSTDDRGYWREEFSLIGILLVFFIVIVALGYDVPFDAGLFPVIIVTAGILLMLGIGIE
Ga0126373_126428761	3300010048	Tropical Forest Soil	MSTDSRGYWREEFSLIVLLLLFFIGIVALSYPLPFDARLFPLVIGSA
Ga0134067_100735401	3300010321	Grasslands Soil	MKARMSDDTQVRGYWREEFALIAILLAFFAGIVAFAFHIPFDARLFPMVIGSAGMLLVLAVALEQMRRRGAAAP
Ga0126370_112349951	3300010358	Tropical Forest Soil	MSIGKSVRNYWREEFALIALLLVFFAGIVVLARGIPFDARLFPVIIGSLGIALTLLVAFEQWRLA
Ga0126370_126606082	3300010358	Tropical Forest Soil	LSGRQARIASYWREEFALIALLLLFFVGIVALTYKIPFDARLFPVVVGSAGIVLTLAIAVEQV
Ga0126378_128740152	3300010361	Tropical Forest Soil	MSTDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGS
Ga0134125_109670261	3300010371	Terrestrial Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGISVEQVRRRGARD
Ga0134128_104002801	3300010373	Terrestrial Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGISVEQVRRRG
Ga0134128_108318071	3300010373	Terrestrial Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTL
Ga0126381_1010897741	3300010376	Tropical Forest Soil	MSTDERGYWREEFSLIGILLIFFIAIVALAYDVPFDARLFPLVIGTAGILLMLGIGIEQLRRRRARDASTLDA
Ga0126381_1048955011	3300010376	Tropical Forest Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYHLPFDARLFPIVIGSAGILLTLGIAVEQVRRRGAR
Ga0134123_117110902	3300010403	Terrestrial Soil	MSIDARVRAYWREEFSLIALLLLFFVAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQVRR
Ga0105246_124353182	3300011119	Miscanthus Rhizosphere	MSTEAQIKGYWREELALIALLFIFFVGIVALSFNTPFDARLFPIVIGSAG
Ga0137392_106680962	3300011269	Vadose Zone Soil	MSIDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAIEQV
Ga0150985_1131112751	3300012212	Avena Fatua Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVTFGYSLPFDARLFPLIIGCAGIVL
Ga0137371_104080633	3300012356	Vadose Zone Soil	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAI
Ga0137384_106358511	3300012357	Vadose Zone Soil	MSTDSRGYWREELSLIAVLLLFFVGIVALSYHLPFDARLFPMVIGSAGIL
Ga0157308_102909712	3300012910	Soil	MSIDARMRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPVIIGCAGIVLTLAVALDQVRRHH
Ga0126375_110640541	3300012948	Tropical Forest Soil	MSTDSRAYWREELSLIALLLLFFIGIVALSYHLPFDARLFPIVIGSA
Ga0126369_122665641	3300012971	Tropical Forest Soil	MSTDCRRYWREEFFLIAILLAFFVAIVALSYHVPFDARLFPVVIGSAGILLTIGLAVEQMRARGA
Ga0164304_106619131	3300012986	Soil	MSTDSRGYWREEFSLIAILLAFFIGIVVLSYHLPFDARLFPLVIGTAGILLTL
Ga0137412_104229022	3300015242	Vadose Zone Soil	MLSVSNVRGYWREELSLIALLLLFFVGIVAFSYKTPFDARLFPLIIGVSGIALTLLIAVGQV
Ga0137409_115255342	3300015245	Vadose Zone Soil	MAADSRVRGFWREEFSLIALLLVFFIGIVVFSYNTPFDARLFPLIIGSAGILLTLGIAVE
Ga0132255_1041885822	3300015374	Arabidopsis Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGMLLMLAIAA
Ga0182036_115788172	3300016270	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGI
Ga0182033_109699971	3300016319	Soil	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAG
Ga0182032_102278093	3300016357	Soil	MSTDSRGYWREELTLIAILLVFFIGIVALSYHLPFDARLF
Ga0182040_104675892	3300016387	Soil	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIG
Ga0182037_119672962	3300016404	Soil	MSTDSRGYWREEFSLIAILFVFFVGIVALSYHIPFDARLFPLVIGSAGILLTLAIAI
Ga0182037_121341311	3300016404	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGIL
Ga0184625_100300244	3300018081	Groundwater Sediment	MSSDARIRGYWREEFSLIAVLLLFFAGIVVFSFKNPFDARLFPLVIGTAGILLTLVIAVEQIRRQRAG
Ga0066662_119239322	3300018468	Grasslands Soil	MSTDSRGYWREELSLIAVLLLFFVGIVALSYHLPFDARLFPMVIGRAGILLTLGIAIEQVRRHGARDA
Ga0066669_100224851	3300018482	Grasslands Soil	MSTDCRRYWREEFFLIAILLSFFVAIVALSYHVPLDA
Ga0173481_104961202	3300019356	Soil	MPTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAIEQVRRRGARDATTMDDD
Ga0179594_102681842	3300020170	Vadose Zone Soil	MAVDSNVRGYRREELSLIGLLLLFFVGIVAFSYNTPFDARLFPVILGSAGIALTLLIAVEQMRLRRSDD
Ga0210400_109566342	3300021170	Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGISV
Ga0213874_101377001	3300021377	Plant Roots	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLGI
Ga0126371_125140421	3300021560	Tropical Forest Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYHLPFDARLFPIVIGSAGILLTLGIAIEQM
Ga0179589_105896271	3300024288	Vadose Zone Soil	MSTDSRGYWREELALIAILLVFFIGIAALSYHLPFDARLFPLVI
Ga0207653_101662451	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTVLLA
Ga0207659_101364621	3300025926	Miscanthus Rhizosphere	MSIDARVRAYWHEEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGSAGIV
Ga0207644_100709851	3300025931	Switchgrass Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAV
Ga0207640_118823722	3300025981	Corn Rhizosphere	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTL
Ga0209239_13610781	3300026310	Grasslands Soil	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGIL
Ga0209156_102584742	3300026547	Soil	MSTDCRRYWREEFFLIAILLSFFVAIVALSYHVPLDARL
Ga0208366_10347691	3300027073	Forest Soil	MSTDSRGYWREEFSLTAILLAFFIGIVALSYHIPF
Ga0207983_10402562	3300027310	Soil	MSTDSRGYWREEFSLIAILLAFFIGIVVLSYHIPFDARLFPLV
Ga0209814_102766961	3300027873	Populus Rhizosphere	MSSDARIRGYWREEFSLIAVLLLFFAGIVVFSFRNPFDARLFPLVIGTAGILLTLVI
Ga0209382_114282832	3300027909	Populus Rhizosphere	MSADSKARSFWREEFSLIAVLLCFFIGIIGFVYKTPFDARLFPLVIGSAGILLTLVIAAEQLRRR
Ga0209382_122473661	3300027909	Populus Rhizosphere	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPL
Ga0209069_104788401	3300027915	Watersheds	MSLDTNARAYWREEFSLIALLLLFFIAIVAFAYTLPFDARLFPLIIGCAGIALTLAVALEQMRRRRAGAA
Ga0247749_10433442	3300027993	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALD
Ga0307284_103466091	3300028799	Soil	MSTDSRGYWREEFSLIALLLLFFIAIVALSYHIPFDARLFPLLIGSAGILLTLG
Ga0307289_102647541	3300028875	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIVLTLAVALDQVRRRRA
Ga0307304_103649191	3300028885	Soil	MSLDTSARTYWREEFSLIALLLLFFIAIVAFAYTLPFDARLFPLIIGCAGIALTLVVALE
Ga0307500_100259951	3300031198	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGCAGIALTLAVALDQVRRR
Ga0307497_101530072	3300031226	Soil	LSQIRGYWGEEFSLIGLLLLFFVGIVAFSYKTPFDARPFPVIIGASGIA
Ga0308194_100155781	3300031421	Soil	MSLDTNARAYWREEFSLIALLLLFFIAIVAFAYTLPFDARLFPLIIGCAGIALTLA
Ga0170818_1003091621	3300031474	Forest Soil	MSLDTNARAYWREEFSLIALLLLFFIAIVAFACTLPFDARLFPLIIGCAGI
Ga0318516_107533572	3300031543	Soil	MSTDSRGYWREELALIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIA
Ga0318538_100129651	3300031546	Soil	MSTDSRGYWREELSLIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGI
Ga0318571_103919462	3300031549	Soil	MSTDSRGYWREEFSLIAILFVFFVGIVALSYHIPFDARLFPLVIGSAGILLTLAIA
Ga0318515_103009031	3300031572	Soil	MSTDDKGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIVGTAGILLMLGIG
Ga0310915_103543871	3300031573	Soil	MSSDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGIL
Ga0318561_100182241	3300031679	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYHLPFDARLFPLVIGTAG
Ga0318493_102887822	3300031723	Soil	MSTDDKGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIVGTAGILLMLGIGIEQL
Ga0306918_110603792	3300031744	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIVQMRGRG
Ga0318535_100442701	3300031764	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYPLPFDARLFPLVIGTAGILLTLGIA
Ga0318509_107042511	3300031768	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIV
Ga0318498_104242002	3300031778	Soil	MSTDSRGYWREEFSLIAILLAFFIGIVALCYHLPFD
Ga0318508_10116903	3300031780	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYPLPFDARLFPLVIGSAGILL
Ga0318552_101409212	3300031782	Soil	MSNDAELRGYWREEFALIAILLAFFVSIVAFAFHIPFDAR
Ga0318548_100954381	3300031793	Soil	MSTDSRGYWREEFSLIAILLAFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAVEQVRRRGARDASTMD
Ga0318548_106530642	3300031793	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIG
Ga0318568_100065741	3300031819	Soil	MSSDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIV
Ga0318567_102625302	3300031821	Soil	MSNDAELRGYWREEFALIAILLAFFVSIVAFAFHIPFDARLFP
Ga0310917_100024649	3300031833	Soil	MSTDSRGYWREEFSLIAMLLLFFVGIVALSYHLPFDARLFPIVIGSAGILLTLGIAIEQMRWRGA
Ga0318512_102066511	3300031846	Soil	MSTDSRGYWREEFSLIAILFVFFVGIVALSYHIPFDARLFP
Ga0310904_113151792	3300031854	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTLTVAL
Ga0310892_112537942	3300031858	Soil	MSIDARVRAYWREEFSLIALLLLFFIAIVAFGYSLPFDARLFPLIIGGAGIVLTLTVALA
Ga0318495_100905771	3300031860	Soil	MSNDAELRGYWREEFALIAILLAFFVSIVAFAFHIPFDARLFPVVIGGAGI
Ga0306919_111748072	3300031879	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIEQMRGRGARD
Ga0306925_102764081	3300031890	Soil	MSTDSRGYWREEFSLIAMLLLFFVGIVALSYHLPFDARLFPIVIGSAGILLTLGIAIEQM
Ga0306921_100166101	3300031912	Soil	MSTDDKGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIVGTAGILLMLGIGIEQLRRRRARDVSTLDADDP
Ga0310916_106262191	3300031942	Soil	MSTDSRGYWREEFSLIAILLAFFIGIVALSYHLPFDARLFPLVIGSAGILLTLAIAIEQVRRRGARDAA
Ga0310916_108527841	3300031942	Soil	MSTDDKGYWREEFSLIGILLVFFIAIVALAYDVPFDARLFPVIVGTAGILLMLGIGIEQLRRRRAR
Ga0310916_112570692	3300031942	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIVQ
Ga0310910_110416572	3300031946	Soil	MSSDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIVQMRGRGTR
Ga0306926_100244747	3300031954	Soil	MSSDSRGYWREELSLIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIVQMRGRGTRD
Ga0306926_123664002	3300031954	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIAIVQMRGRGTRD
Ga0318563_101699941	3300032009	Soil	MSTDSRGYWREEFSLIAILFAFFIGIVALSYHLPFDARLFPLVIGSAGILLTLAIA
Ga0318545_100103044	3300032042	Soil	MSTDSRGYWREEFSLIAMLLLFFVGIVALSYHLPFDARLFPIVIGSAGILLTLGIAIEQMRRRGARDASTVDEDD
Ga0318545_102500381	3300032042	Soil	MSNDAELRGYWREEFALIAILLAFFVSIVAFAFHIPFD
Ga0318532_100864191	3300032051	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYHLPFDARLFPLVIGTAGILLTLGIAVEQV
Ga0318505_100342673	3300032060	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYPLPFDARLF
Ga0318513_100302811	3300032065	Soil	MSTDSRGYWREELALIALLLLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGIA
Ga0318513_100431691	3300032065	Soil	MSTDSRGYWREELALIAILLVFFIGIVALSYPLPFDARLFPLVIGTAGILLTL
Ga0318513_102723221	3300032065	Soil	MSTDSRGYWREEFSLIAMLLLFFVGIVALSYHLPFDARLFPIVIGSAGILLTLGIAIEQMRRRCR
Ga0318524_105790881	3300032067	Soil	MSTDSRGYWREEFSLIAILFVFFVGIVALSYHIPFDARLFPLVIGSAGILLTLAIAIEQVRRR
Ga0318577_101329022	3300032091	Soil	MSSDSRGYWREELALIALLFLFFIGIVALSYPLPFDARLFPLVIGSAGILLTLGI
Ga0318519_109756022	3300033290	Soil	MSTDSRGYWREELSLIALLLLFFVGIVALSYPLPFDARLFPFVIGSAGILLTLGIAIEQATRRGARDASTVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences