NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045085

Metagenome / Metatranscriptome Family F045085

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045085
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 51 residues
Representative Sequence KLYKVIDLTVGLVFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK
Number of Associated Samples 125
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 6.62 %
% of genes near scaffold ends (potentially truncated) 26.80 %
% of genes from short scaffolds (< 2000 bps) 64.05 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (48.366 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(22.876 % of family members)
Environment Ontology (ENVO) Unclassified
(64.706 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(70.588 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.25%    β-sheet: 0.00%    Coil/Unstructured: 38.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF00588SpoU_methylase 16.34
PF00483NTP_transferase 3.27
PF00583Acetyltransf_1 3.27
PF01068DNA_ligase_A_M 1.96
PF04851ResIII 1.31
PF00293NUDIX 1.31
PF01041DegT_DnrJ_EryC1 0.65
PF00565SNase 0.65
PF00574CLP_protease 0.65
PF00303Thymidylat_synt 0.65
PF13578Methyltransf_24 0.65
PF13385Laminin_G_3 0.65
PF07963N_methyl 0.65
PF01592NifU_N 0.65
PF04321RmlD_sub_bind 0.65
PF07460NUMOD3 0.65
PF00186DHFR_1 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG0219tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domainTranslation, ribosomal structure and biogenesis [J] 16.34
COG0565tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferaseTranslation, ribosomal structure and biogenesis [J] 16.34
COG0566tRNA G18 (ribose-2'-O)-methylase SpoUTranslation, ribosomal structure and biogenesis [J] 16.34
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 1.96
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 1.96
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.31
COG1086NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsCCell wall/membrane/envelope biogenesis [M] 1.31
COG0702Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domainsGeneral function prediction only [R] 1.31
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.31
COG0451Nucleoside-diphosphate-sugar epimeraseCell wall/membrane/envelope biogenesis [M] 1.31
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.65
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.65
COG0207Thymidylate synthaseNucleotide transport and metabolism [F] 0.65
COG0822Fe-S cluster assembly scaffold protein IscU, NifU familyPosttranslational modification, protein turnover, chaperones [O] 0.65
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.65
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.65
COG1087UDP-glucose 4-epimeraseCell wall/membrane/envelope biogenesis [M] 0.65
COG1088dTDP-D-glucose 4,6-dehydrataseCell wall/membrane/envelope biogenesis [M] 0.65
COG1089GDP-D-mannose dehydrataseCell wall/membrane/envelope biogenesis [M] 0.65
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 0.65
COG1091dTDP-4-dehydrorhamnose reductaseCell wall/membrane/envelope biogenesis [M] 0.65
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.65
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.65
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.65
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.65

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.93 %
UnclassifiedrootN/A30.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000882|FwDRAFT_10059020All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1158Open in IMG/M
3300001213|JGIcombinedJ13530_105427395All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon542Open in IMG/M
3300002278|B570J29590_107632All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon628Open in IMG/M
3300002408|B570J29032_109634156All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon968Open in IMG/M
3300003277|JGI25908J49247_10032554All Organisms → Viruses → Predicted Viral1465Open in IMG/M
3300003388|JGI25910J50241_10032618Not Available1750Open in IMG/M
3300004240|Ga0007787_10062803All Organisms → Viruses → Predicted Viral1681Open in IMG/M
3300004240|Ga0007787_10150253All Organisms → Viruses → Predicted Viral1118Open in IMG/M
3300004795|Ga0007756_11604174Not Available806Open in IMG/M
3300005527|Ga0068876_10009988Not Available6291Open in IMG/M
3300005527|Ga0068876_10537076All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon639Open in IMG/M
3300005580|Ga0049083_10150481Not Available798Open in IMG/M
3300005581|Ga0049081_10001149Not Available9982Open in IMG/M
3300005583|Ga0049085_10075013All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1186Open in IMG/M
3300005583|Ga0049085_10193684Not Available676Open in IMG/M
3300005584|Ga0049082_10170647All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon750Open in IMG/M
3300005584|Ga0049082_10199365All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon685Open in IMG/M
3300005585|Ga0049084_10013500All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3330Open in IMG/M
3300005585|Ga0049084_10110973All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon978Open in IMG/M
3300005662|Ga0078894_10043816All Organisms → Viruses → Predicted Viral3759Open in IMG/M
3300005805|Ga0079957_1005153Not Available10690Open in IMG/M
3300005941|Ga0070743_10223643Not Available615Open in IMG/M
3300006484|Ga0070744_10250010Not Available501Open in IMG/M
3300006641|Ga0075471_10168882All Organisms → Viruses → Predicted Viral1150Open in IMG/M
3300006805|Ga0075464_10758764All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon602Open in IMG/M
3300006875|Ga0075473_10049932Not Available1619Open in IMG/M
3300007546|Ga0102874_1076788All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1064Open in IMG/M
3300007548|Ga0102877_1101398All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon821Open in IMG/M
3300007562|Ga0102915_1008006All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3527Open in IMG/M
3300007597|Ga0102919_1275395Not Available524Open in IMG/M
3300007606|Ga0102923_1002616All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon5397Open in IMG/M
3300007618|Ga0102896_1020702All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2230Open in IMG/M
3300007620|Ga0102871_1003704All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4825Open in IMG/M
3300007642|Ga0102876_1113241Not Available732Open in IMG/M
3300007653|Ga0102868_1085620All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon711Open in IMG/M
3300007735|Ga0104988_11020Not Available110467Open in IMG/M
3300007973|Ga0105746_1003954All Organisms → Viruses → Predicted Viral4048Open in IMG/M
3300008107|Ga0114340_1003741Not Available9807Open in IMG/M
3300008108|Ga0114341_10159681All Organisms → Viruses → Predicted Viral2304Open in IMG/M
3300008111|Ga0114344_1114417Not Available963Open in IMG/M
3300008117|Ga0114351_1062472All Organisms → Viruses → Predicted Viral2283Open in IMG/M
3300008259|Ga0114841_1191214Not Available753Open in IMG/M
3300008267|Ga0114364_1039443All Organisms → Viruses → Predicted Viral3565Open in IMG/M
3300008450|Ga0114880_1046196All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1861Open in IMG/M
3300008450|Ga0114880_1155152All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon819Open in IMG/M
3300008450|Ga0114880_1252229Not Available549Open in IMG/M
3300008962|Ga0104242_1000428All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon8922Open in IMG/M
3300009068|Ga0114973_10226925All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1013Open in IMG/M
3300009068|Ga0114973_10348060All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon783Open in IMG/M
3300009068|Ga0114973_10714250Not Available509Open in IMG/M
3300009152|Ga0114980_10053597Not Available2441Open in IMG/M
3300009152|Ga0114980_10262963All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1006Open in IMG/M
3300009152|Ga0114980_10302015All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon928Open in IMG/M
3300009158|Ga0114977_10467763All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon694Open in IMG/M
3300009159|Ga0114978_10349682All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon894Open in IMG/M
3300009159|Ga0114978_10391926All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon833Open in IMG/M
3300009159|Ga0114978_10869648All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon505Open in IMG/M
3300009161|Ga0114966_10238013All Organisms → Viruses → Predicted Viral1131Open in IMG/M
3300009161|Ga0114966_10373836Not Available841Open in IMG/M
3300009161|Ga0114966_10736399All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon537Open in IMG/M
3300009163|Ga0114970_10157711All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1360Open in IMG/M
3300009164|Ga0114975_10207101Not Available1107Open in IMG/M
3300009183|Ga0114974_10462120All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon717Open in IMG/M
3300009183|Ga0114974_10530760All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon657Open in IMG/M
3300010160|Ga0114967_10160583All Organisms → Viruses → Predicted Viral1240Open in IMG/M
3300010312|Ga0102883_1160254All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon642Open in IMG/M
3300011010|Ga0139557_1007056Not Available2313Open in IMG/M
3300011335|Ga0153698_1219Not Available26971Open in IMG/M
3300011995|Ga0153800_1005997Not Available1150Open in IMG/M
3300012663|Ga0157203_1006251All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2201Open in IMG/M
3300012754|Ga0138278_1048537Not Available509Open in IMG/M
3300013006|Ga0164294_10139657All Organisms → Viruses → Predicted Viral1760Open in IMG/M
(restricted) 3300013126|Ga0172367_10038260All Organisms → Viruses → Predicted Viral4030Open in IMG/M
3300013295|Ga0170791_15003462All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon663Open in IMG/M
3300017761|Ga0181356_1010503Not Available3545Open in IMG/M
3300017788|Ga0169931_10041921Not Available5120Open in IMG/M
3300019784|Ga0181359_1047212All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1663Open in IMG/M
3300019784|Ga0181359_1231455All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon574Open in IMG/M
3300020151|Ga0211736_10247129All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1319Open in IMG/M
3300020151|Ga0211736_10700401All Organisms → Viruses → Predicted Viral1556Open in IMG/M
3300020160|Ga0211733_11181772All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1046Open in IMG/M
3300020161|Ga0211726_10263422Not Available2727Open in IMG/M
3300020172|Ga0211729_10153468All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon660Open in IMG/M
3300020172|Ga0211729_10311336All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon986Open in IMG/M
3300020498|Ga0208050_1000668Not Available5218Open in IMG/M
3300021961|Ga0222714_10141304All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1457Open in IMG/M
3300021961|Ga0222714_10212758All Organisms → Viruses → Predicted Viral1108Open in IMG/M
3300021962|Ga0222713_10016731All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon6297Open in IMG/M
3300021963|Ga0222712_10505044Not Available714Open in IMG/M
3300022179|Ga0181353_1149576Not Available538Open in IMG/M
3300022752|Ga0214917_10005078Not Available14199Open in IMG/M
3300023179|Ga0214923_10004165Not Available17668Open in IMG/M
3300023179|Ga0214923_10017497Not Available6640Open in IMG/M
3300023179|Ga0214923_10093664All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2056Open in IMG/M
3300023184|Ga0214919_10046755All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4198Open in IMG/M
3300024346|Ga0244775_10826813All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon739Open in IMG/M
3300024348|Ga0244776_10079767All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2485Open in IMG/M
3300024549|Ga0256308_1001994All Organisms → Viruses → Predicted Viral4112Open in IMG/M
3300024560|Ga0256306_1166909All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon504Open in IMG/M
3300027126|Ga0255098_1001175All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon6243Open in IMG/M
3300027156|Ga0255078_1063485Not Available727Open in IMG/M
3300027205|Ga0208926_1006346All Organisms → Viruses → Predicted Viral1738Open in IMG/M
3300027224|Ga0208164_1035629All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon911Open in IMG/M
3300027224|Ga0208164_1080793Not Available557Open in IMG/M
3300027468|Ga0209247_1052362All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon591Open in IMG/M
3300027578|Ga0255075_1014252All Organisms → Viruses → Predicted Viral1585Open in IMG/M
3300027586|Ga0208966_1097096Not Available810Open in IMG/M
3300027586|Ga0208966_1185066All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon538Open in IMG/M
3300027608|Ga0208974_1008723All Organisms → Viruses → Predicted Viral3356Open in IMG/M
3300027627|Ga0208942_1103747Not Available806Open in IMG/M
3300027649|Ga0208960_1030929All Organisms → Viruses → Predicted Viral1923Open in IMG/M
3300027659|Ga0208975_1002922All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon6640Open in IMG/M
3300027733|Ga0209297_1040831All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2129Open in IMG/M
3300027734|Ga0209087_1037112All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2296Open in IMG/M
3300027736|Ga0209190_1145735All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1032Open in IMG/M
3300027736|Ga0209190_1176070All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon903Open in IMG/M
3300027746|Ga0209597_1045728All Organisms → Viruses → Predicted Viral2199Open in IMG/M
3300027756|Ga0209444_10179250Not Available786Open in IMG/M
3300027759|Ga0209296_1012076All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon5138Open in IMG/M
3300027759|Ga0209296_1125821All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1186Open in IMG/M
3300027759|Ga0209296_1227605All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon781Open in IMG/M
3300027759|Ga0209296_1244360All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon742Open in IMG/M
3300027763|Ga0209088_10102841All Organisms → Viruses → Predicted Viral1308Open in IMG/M
3300027769|Ga0209770_10014416All Organisms → Viruses → Predicted Viral3534Open in IMG/M
3300027770|Ga0209086_10109259All Organisms → Viruses → Predicted Viral1401Open in IMG/M
3300027782|Ga0209500_10019824All Organisms → cellular organisms → Archaea3936Open in IMG/M
3300027798|Ga0209353_10081033All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300027804|Ga0209358_10056075All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2310Open in IMG/M
3300027836|Ga0209230_10168928Not Available1251Open in IMG/M
3300027971|Ga0209401_1176795All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon814Open in IMG/M
3300027973|Ga0209298_10025202All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2932Open in IMG/M
3300027974|Ga0209299_1130203All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon964Open in IMG/M
3300028394|Ga0304730_1311588Not Available537Open in IMG/M
3300031746|Ga0315293_10056787All Organisms → Viruses → Predicted Viral3386Open in IMG/M
3300031758|Ga0315907_10089376All Organisms → Viruses → Predicted Viral2649Open in IMG/M
3300031772|Ga0315288_11445683Not Available572Open in IMG/M
3300031784|Ga0315899_10180103All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2141Open in IMG/M
3300031787|Ga0315900_10083808All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3174Open in IMG/M
3300031857|Ga0315909_10264280All Organisms → Viruses → Predicted Viral1311Open in IMG/M
3300031952|Ga0315294_10687344All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon900Open in IMG/M
3300031963|Ga0315901_10609812All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon827Open in IMG/M
3300032050|Ga0315906_10243091All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1660Open in IMG/M
3300032053|Ga0315284_10451424All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1572Open in IMG/M
3300032093|Ga0315902_10133207All Organisms → Viruses → Predicted Viral2622Open in IMG/M
3300033978|Ga0334977_0036887All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Pycnogonida → Pantopoda → Nymphonidae → Nymphon → Nymphon striatum2756Open in IMG/M
3300033994|Ga0334996_0002858Not Available11842Open in IMG/M
3300033996|Ga0334979_0716003All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon521Open in IMG/M
3300034073|Ga0310130_0000089Not Available94826Open in IMG/M
3300034102|Ga0335029_0070763All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2514Open in IMG/M
3300034104|Ga0335031_0137881All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300034167|Ga0335017_0206544All Organisms → Viruses → Predicted Viral1126Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake22.88%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake11.11%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic9.15%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.15%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.15%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater4.58%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.58%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.92%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.61%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.61%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.96%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.65%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.65%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.65%
Freshwater And MarineEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine0.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.65%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.65%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.65%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.65%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000882Freshwater microbial communities from the Columbia RiverEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002278Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003388Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004795Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005585Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007546Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02EnvironmentalOpen in IMG/M
3300007548Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3EnvironmentalOpen in IMG/M
3300007562Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02EnvironmentalOpen in IMG/M
3300007597Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02EnvironmentalOpen in IMG/M
3300007606Estuarine microbial communities from the Columbia River estuary - metaG 1569-02EnvironmentalOpen in IMG/M
3300007618Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02EnvironmentalOpen in IMG/M
3300007620Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02EnvironmentalOpen in IMG/M
3300007642Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3EnvironmentalOpen in IMG/M
3300007653Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3EnvironmentalOpen in IMG/M
3300007735Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014OctEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010312Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02EnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011335Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - GumanEnvironmentalOpen in IMG/M
3300011995Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300012754Freshwater microbial communities from Lake Montjoie, Canada - M_130821_M_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024549Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024560Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027126Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8dEnvironmentalOpen in IMG/M
3300027144Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300027156Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027205Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027224Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027375Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8dEnvironmentalOpen in IMG/M
3300027468Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027578Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8hEnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027627Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027649Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027746Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027974Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034167Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FwDRAFT_1005902033300000882Freshwater And MarineMNKVIDLTIGLIFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
JGIcombinedJ13530_10542739523300001213WetlandMSKIINLILGLIFGTIFAVGLLLVLAIFFAVLIPFIFYFTVKEILRALIKN*
B570J29590_10763233300002278FreshwaterMNTLYKLIDLTLGLIFGSVFALGLILVLCIFFTVLIPFLFYFTVKEVV
B570J29032_10963415623300002408FreshwaterMSKIINLTLGLIFGTIFAVGLLLVLAIFFVVLIPFIFYFTVKEVLRSLIKN*
JGI25908J49247_1003255423300003277Freshwater LakeMNKVIDLTVGLIFGTIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK*
JGI25910J50241_1003261863300003388Freshwater LakeMNKLYKVIDLIIGLIFGSIFAIGIIFVITIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0007787_1006280313300004240Freshwater LakeNTLYKLIDLTLGLIFGSVFAIGLILVLCIFFVVLIPFLFYFTVREVLKQLIVNK*
Ga0007787_1015025323300004240Freshwater LakeMSKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN*
Ga0007756_1160417433300004795Freshwater LakeLIFGSVFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLTVIK*
Ga0068876_10009988123300005527Freshwater LakeMSKIINLTVGLIFGSIFAIALILVLMIFFAVLIPFFFYFTLKEVLKYLTNTK*
Ga0068876_1053707623300005527Freshwater LakeMNKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN*
Ga0049083_1015048123300005580Freshwater LenticMKIINWTFTLIYGIIFAIGLGLLIVFTIFFVVLVPFILYFTVKEVLKALTKTK*
Ga0049081_10001149173300005581Freshwater LenticMNKIINLILGLIFGTIFAVGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN*
Ga0049085_1007501333300005583Freshwater LenticMNKIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTLKEVLKALTKTK*
Ga0049085_1019368413300005583Freshwater LenticIFAMAILLVITIFFGILIPFLFYFILKEVLKALTKTK*
Ga0049082_1017064733300005584Freshwater LenticMNKVIDLTVGLVFGSIFAMAILLVITIFFGILIPFLFYFILKEVLKA
Ga0049082_1019936523300005584Freshwater LenticMKIINWTFTLIYGIIFAMAILLVITIFFGILIPFLFYFILKEVLKALTKTK*
Ga0049084_1001350053300005585Freshwater LenticMNKLYKVIDLTIGLIFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0049084_1011097333300005585Freshwater LenticMNKVIDLTVGLVFGTIFAIGLLIVLTIFFVVLVPFVFYFTVKEVLKALTKTK*
Ga0078894_1004381623300005662Freshwater LakeMNTLYKLIDLTLGLIFGSVFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLTVIK*
Ga0079957_1005153153300005805LakeMNKLINLTVGLLFGIIFAIGLLLILTIFFAVLIPFIFYLTVREVLKHLTNAK*
Ga0070743_1022364313300005941EstuarineVIDLTIGLIMGSLFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0070744_1025001023300006484EstuarineMNKLYKVIDLTVGLVFGSLFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK*
Ga0075471_1016888253300006641AqueousMNILCKLIDLTIGLIFGTIFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLT
Ga0075464_1075876423300006805AqueousMNKLYKVIDLIIGLIFGSLFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0075473_1004993213300006875AqueousKLIDLTIGLIFGTIFALGLILVLCIFFTVLIPFLFYFTVKEVIKQLTVIK*
Ga0102874_107678833300007546EstuarineMNKLYKVIDLTVGLVFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0102877_110139833300007548EstuarineMNKLYKVIDLTVGLVFGSIFAIGIILVIAIFFTVLIPSIFYFTVREVLKQLTKK*
Ga0102915_100800683300007562EstuarineMNKLYKVIDLTIGLIFGSIFAIGIILVIAIFFTVLIPSIFYFTVREVLKQLTKK*
Ga0102919_127539523300007597EstuarineNNLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK*
Ga0102923_100261633300007606EstuarineMNKLYKVIDLTIGLIFGSLFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0102896_102070233300007618EstuarineMNKLYKVIDLTVGLVFGSIFAIGIILVIAIFFVVLIPSIFYFTVREVLKQLTKK*
Ga0102871_100370483300007620EstuarineMNKIINLTVGLIFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0102876_111324113300007642EstuarineFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0102868_108562013300007653EstuarineMNKLYKVIDLTIGLIMGSLFAMAILLVITIFFAVLIPFIFYFTVREVLKQLTKK*
Ga0104988_11020473300007735FreshwaterMNKIIDLTVGIIFGTLFALALILVLMIFFAVLIPFLFYFTLKEVLKYLTNTK*
Ga0105746_100395453300007973Estuary WaterMNILCKLIDLTLGLIFGSIFALGLILVLCIFFVVLIPFLFYFTVKEVLRKLMTNK*
Ga0114340_100374183300008107Freshwater, PlanktonMSKIINLTVGIIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR*
Ga0114341_1015968173300008108Freshwater, PlanktonMNTLYKLIDLTLGLIFGSVFAIGLILVLCIFFVVLIPFLFYFTVKEVLRKLMTNK*
Ga0114344_111441713300008111Freshwater, PlanktonFKKMMRIIDLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVREVLKQLTKR*
Ga0114351_106247253300008117Freshwater, PlanktonMNTLYKLIDLTLGLIFGSVFAIGLILVLCIFFVVLIPFLFYFTVREVLKQLIVNK*
Ga0114841_119121433300008259Freshwater, PlanktonRIIDLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVREVLKQLTKR*
Ga0114364_103944353300008267Freshwater, PlanktonMSKIINLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR*
Ga0114880_104619613300008450Freshwater LakeMSKIINLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYL
Ga0114880_115515213300008450Freshwater LakeMSKIINLTVGIIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYL
Ga0114880_125222913300008450Freshwater LakeIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR*
Ga0104242_100042893300008962FreshwaterMNILCKLIDLIIGLIFGTIFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLTVIK*
Ga0114973_1022692533300009068Freshwater LakeMNRIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK*
Ga0114973_1034806023300009068Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0114973_1071425013300009068Freshwater LakeKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTLKEVLKALTKTK*
Ga0114980_1005359713300009152Freshwater LakeMNKVIDLTVGLLFGTLFAIGLLIVLTIFFVVLIPFIYYFTVKEVLKALTKTK*
Ga0114980_1026296323300009152Freshwater LakeMNKLYKLIDLIIGLIFGSLFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0114980_1030201523300009152Freshwater LakeMNKVIDVTVGLIFGTIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK*
Ga0114977_1046776333300009158Freshwater LakeMNNLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK*
Ga0114978_1034968223300009159Freshwater LakeMNKLYKVIDLTVGLVFGTIFAIGIILVIAIFFVVLIPSIFYFTVREVLKQLIKK*
Ga0114978_1039192633300009159Freshwater LakeMNKVIDLTVGLLFGSIFAIGLLIVLTIFFGILIPFLFYFTVREVLKQLTKK*
Ga0114978_1086964823300009159Freshwater LakeMNKLYKVIDLTIGLVFGSLFAIGIVLVITIFFVVLIPSIFYFTVREVLKQLTKK*
Ga0114966_1023801333300009161Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFVFYFTVKEVLKALTKTK*
Ga0114966_1037383613300009161Freshwater LakeVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK*
Ga0114966_1073639923300009161Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKKSFKKGE
Ga0114970_1015771123300009163Freshwater LakeMNNLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTLKEVLKALTKTK*
Ga0114975_1020710143300009164Freshwater LakeLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK*
Ga0114974_1046212023300009183Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFLLYFTVKEVLKALTKTK*
Ga0114974_1053076033300009183Freshwater LakeMNKLYKVIDLTVGLVFGSLFAIGIILVITIFFVVLIPSIFYFTVREVLKQLIKK*
Ga0114967_1016058323300010160Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK*
Ga0102883_116025423300010312EstuarineMNKLYKVIDLTIGLIFGSIFSIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK*
Ga0139557_100705613300011010FreshwaterVFGTIFAIGLLIVLTIFFVVLVPFVFYFTVKEVLKALTKTK*
Ga0153698_1219183300011335FreshwaterMNKVIDLTVGLLFGSIFAIGLLIVLTIFFVVLIPFIYYFTLKEVLKALTKTK*
Ga0153800_100599713300011995FreshwaterIGLIFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK*
Ga0157203_100625173300012663FreshwaterLIFGSIFAIGIVLVITIFFAVLIPSIFYFTVREVLKQLTKK*
Ga0138278_104853723300012754Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVIAIFFAVLRQSIFYFTVREVLKQLTKK*
Ga0164294_1013965723300013006FreshwaterMNKVIDLTVGLVFGTIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKSLTKTK*
(restricted) Ga0172367_1003826073300013126FreshwaterMNKVIDIIIGTLIGSIFALGLILTLSIFLTVLIPCLFYFTIKEVIKQLTKR*
Ga0170791_1500346233300013295FreshwaterMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFLLYFTVKEVLKAL
Ga0181356_101050313300017761Freshwater LakeLVFGSIFAIGIILVITIFFVVLIPSIFYFTVRAVLKQLTKK
Ga0169931_10041921103300017788FreshwaterMNKVIDIIIGTLIGSIFALGLILTLSIFLTVLIPCLFYFTIKEVIKQLTKR
Ga0181359_104721243300019784Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIYYFTVKEVLKSLTKTK
Ga0181359_123145523300019784Freshwater LakeMNKIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK
Ga0211736_1024712923300020151FreshwaterMNKLYKVIDLTVGLLFGSIFAMGLILVLIIFIAVLIPFLFYFTVREVLKQLTKTN
Ga0211736_1070040153300020151FreshwaterMSKIINLTVGLIFGSIFAISMILVLMIFFAVLIPFFFYFTVKEVLKYLTKR
Ga0211733_1118177223300020160FreshwaterMNKIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTLKEVLKALTKTK
Ga0211726_1026342283300020161FreshwaterMSKIINLTVGLIFGSIFAISLILVLMIFFAVLIPVLFYFTVKEVLKYLTKR
Ga0211729_1015346813300020172FreshwaterMKIIDLTVGLLFGSIFAMAILLVLTIFFVVLIPFLFYFTVREVL
Ga0211729_1031133633300020172FreshwaterMKIIDLTVGLIMGSLFAIAILLVLTIFFVVLIPFLFYFTVREVLKQLTKR
Ga0208050_100066873300020498FreshwaterMNTLYKLIDLTLGLIFGSVFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLTVIK
Ga0222714_1014130423300021961Estuarine WaterMNILYKLIDLTIGLIFGTIFALGLILVLFIFLVVLIPFLFYFTVREVLKQLTKT
Ga0222714_1021275843300021961Estuarine WaterMSKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEILRALIKN
Ga0222713_1001673123300021962Estuarine WaterMRFIDLTVGLIMGSLFAIAILLVLTIFFVVLIPFLFYFTVREVLKQLTKR
Ga0222712_1050504413300021963Estuarine WaterMNKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN
Ga0181353_114957623300022179Freshwater LakeKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN
Ga0214917_1000507853300022752FreshwaterMNILCKLIDLIIGLIFGTIFALGLILVLCIFFTVLIPFLFYFTVKEVVKQLTVIK
Ga0214923_10004165213300023179FreshwaterMKILLKLIDLTFGLIFGSLFAMGVLLVLSIFFVILIPFMFYFIVKEVLRKLITNK
Ga0214923_10017497133300023179FreshwaterMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFILYFTVKEVLKALTKTK
Ga0214923_1009366463300023179FreshwaterMNKLYKVIDLTVGLVFGSIFAIGIVLVIAIFFAVLIPSIFYFTVREVLKQLTKK
Ga0214919_10046755103300023184FreshwaterMNKIINLILGLIFGTIFAVGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN
Ga0244775_1082681323300024346EstuarineMNKLYKVIDLTIGLIFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK
Ga0244776_1007976733300024348EstuarineMNKLYKVIDLTVGLVFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK
Ga0256308_100199473300024549FreshwaterMNTLYKLIDLTLGLIFGSVFAIGLILVLCIFFVVLIPFLFYFTVREVLKQLIVNK
Ga0256306_116690933300024560FreshwaterMNILCKLIDLTLGLIFGSIFALGLILVLCIFFVVLIPFLFYFTVREVLK
Ga0255098_1001175123300027126FreshwaterMNILCKLIDLTLGLIFGSIFALGLILVLCIFFVVLIPFLFYFTVKEVLRKLMTNK
Ga0255102_103086813300027144FreshwaterTIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK
Ga0255078_106348513300027156FreshwaterNLTVGLIFGSIFAISLILVLIIFFAVLIPFLFYFTVKEVLKYLTKR
Ga0208926_100634633300027205EstuarineMNKLYKVIDLTIGLIFGSIFAIGIILVIAIFFTVLIPSIFYFTVREVLKQLTKK
Ga0208164_103562913300027224EstuarineMNILCKLIDLTLGLIFGSIFALGLILVLCIFFVVLIPFLFYFTVKEVLRKLMT
Ga0208164_108079313300027224EstuarineFGSIFAIGIILVIAIFFAVLIPSIFYFTVREVLKQLTKK
Ga0255137_109223013300027375FreshwaterLIFGSIFAIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK
Ga0209247_105236223300027468Freshwater LakeMNKVIDLTVGLIFGTIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK
Ga0255075_101425213300027578FreshwaterMNTLYKLINLTIGLIFGSIFAIGLLLILTIFFVVLIPCIFYFTVKEVLKF
Ga0208966_109709613300027586Freshwater LenticMKIINWTFTLIYGIIFAMAILLVITIFFGILIPFLFYFILKEVLKALTKTK
Ga0208966_118506613300027586Freshwater LenticMNKLYKVIDLIIGLIFGSIFAIGIIFVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0208974_100872393300027608Freshwater LenticMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK
Ga0208942_110374713300027627Freshwater LenticKIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTLKEVLKALTKTK
Ga0208960_103092933300027649Freshwater LenticMNKVIDLTVGLVFGTLFAIGLLIVLTIFFVVLVPFVFYFTVKEVLKALTKTK
Ga0208975_100292223300027659Freshwater LenticMNKLYKVIDLTVGLVFGSLFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK
Ga0209297_104083133300027733Freshwater LakeMNNLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK
Ga0209087_103711223300027734Freshwater LakeMNKLYKVIDLTIGLVFGSLFAIGIVLVITIFFVVLIPSIFYFTVREVLKQLTKK
Ga0209190_114573533300027736Freshwater LakeMNRIINLTVGLIFGSIFAIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK
Ga0209190_117607023300027736Freshwater LakeMNNLYKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTLKEVLKALTKTK
Ga0209597_104572863300027746Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0209444_1017925033300027756Freshwater LakeLIFGSIFAIGIVLAITIFFVVLIPSIFYFTVREVLKQLTKK
Ga0209296_101207643300027759Freshwater LakeMNKLYKVIDLTVGLVFGSLFAIGIILVITIFFVVLIPSIFYFTVREVLKQLIKK
Ga0209296_112582133300027759Freshwater LakeMNKVIDLTVGLLFGTLFAIGLLIVLTIFFVVLIPFIYYFTVKEVLKALTKTK
Ga0209296_122760523300027759Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFLLYFTVKEVLKALTKTK
Ga0209296_124436023300027759Freshwater LakeMNKVIDVTVGLIFGTIFAIGLLIVLTIFFVVLIPFIFYFTVKNVLKALTKIK
Ga0209088_1010284143300027763Freshwater LakeMNKLYKVIDLTVGLVFGTIFAIGIILVIAIFFVVLIPSIFYFTVREVLKQLIKK
Ga0209770_1001441633300027769Freshwater LakeMNILYKLIDLTLGLIFGSVFAIGLILVLCIFFVVLIPFLFYFTVREVLKQLIVNK
Ga0209086_1010925943300027770Freshwater LakeMNKLYKVIDLTVGLVFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK
Ga0209500_1001982433300027782Freshwater LakeMNKVIDLTVGLLFGSIFAIGLLIVLTIFFGILIPFLFYFTVREVLKQLTKK
Ga0209353_1008103323300027798Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVFTIFFVVLVPFILYFTVKEVLKALTKTK
Ga0209358_1005607553300027804Freshwater LakeMSKIINLILGLIFGTIFAIGLLLVLAIFFAVLIPFIFYFTVKEVLRALIKN
Ga0209230_1016892843300027836Freshwater And SedimentIFCSIFAIGIVLVITIFFAVLIPFIFYFTVKEVLKALTKTK
Ga0209401_117679523300027971Freshwater LakeMNKVIDLTVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTLKEVLKALTKTK
Ga0209298_1002520213300027973Freshwater LakeMNKLYKVIDLTVGLVFGTIFAIGIILVIAIFFVVLIPSIFYFTV
Ga0209299_113020343300027974Freshwater LakeMNKLYKVIDLIIGLIFGSLFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0304730_131158813300028394Freshwater LakeKLYKVIDLTVGLVFGSIFAIGIILVITIFFVVLIPSIFYFTVREVLKQLTKK
Ga0315293_1005678723300031746SedimentMNKLYKVIDLTIGLIMGSLFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0315907_1008937643300031758FreshwaterMSKIINLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR
Ga0315288_1144568313300031772SedimentGLIMGSLFAIGIILVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0315899_1018010323300031784FreshwaterMRIIDLTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVREVLKQLTKR
Ga0315900_1008380893300031787FreshwaterMSKIINLTVGIIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR
Ga0315909_1026428013300031857FreshwaterMNKVINLTIGLIFGSIFALGLILVLCIFFVVLIPFLFYFTIREVVKQLIVNK
Ga0315294_1068734413300031952SedimentMKIINWTFTLIYGIIFAMAILLVITIFFAVLIPSIFYFTVREVLKQLTKK
Ga0315901_1060981213300031963FreshwaterMSKIINLILGLIFGTIFALGLILVLAIFFAVLIPFIFYFTVKEVLR
Ga0315906_1024309153300032050FreshwaterMNILYKLIDLTIGLIFGTIFALGLILVLCIFFTVLIPFLFYFTVKEVIKQLTVIK
Ga0315284_1045142433300032053SedimentMNKLYKVIDLTIGLIMGSLFAIGIILVIAIFFAVLIPTIFYFTVREVLKQLTKK
Ga0315902_1013320713300032093FreshwaterTVGLIFGSIFAISLILVLMIFFAVLIPFLFYFTVKEVLKYLTKR
Ga0334977_0036887_2372_25273300033978FreshwaterMSKIINLTLGLIFGTIFAVGLLLVLAIFFVVLIPFIFYFTVKEVLRSLIKN
Ga0334996_0002858_551_7153300033994FreshwaterMNILYKLINLTIGLIFGSIFAIGLLLILSIFFVVLIPFIFYFTVREVLKQLTKR
Ga0334979_0716003_190_3483300033996FreshwaterMNKVIDLTVGLVFGTIFAIGLLIVLTIFFVVLVPFVFYFTVKEVLKALTKTK
Ga0310130_0000089_29628_297833300034073Fracking WaterMSKIINLILGLIFGTIFALGLILVLAIFFAVLIPFIFYFTVKEVLRALIKN
Ga0335029_0070763_74_2383300034102FreshwaterMNILYKLVNLTIGLIFGSIFAIGLLLVLSIFFVVLIPSIFYFTVREVLKQLTKR
Ga0335031_0137881_604_7623300034104FreshwaterMNKGIDLTVGLVFGSIFAIGLLIVLTIFFVILVPFVFFFTVKEVLKALTKTK
Ga0335017_0206544_2_1363300034167FreshwaterVGLVFGSIFAIGLLIVLTIFFVVLVPFIFYFTVKEVLKALTKTK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.