NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F045013

Metagenome / Metatranscriptome Family F045013

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045013
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 46 residues
Representative Sequence MARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCDQNNPNTCK
Number of Associated Samples 118
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.85 %
% of genes near scaffold ends (potentially truncated) 21.57 %
% of genes from short scaffolds (< 2000 bps) 64.71 %
Associated GOLD sequencing projects 113
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.118 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.994 % of family members)
Environment Ontology (ENVO) Unclassified
(26.144 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(35.948 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 36.00%    β-sheet: 9.33%    Coil/Unstructured: 54.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF12833HTH_18 11.76
PF13424TPR_12 9.80
PF00072Response_reg 6.54
PF13411MerR_1 4.58
PF13374TPR_10 1.96
PF01966HD 1.96
PF12019GspH 1.31
PF04264YceI 1.31
PF07963N_methyl 1.31
PF04011LemA 1.31
PF13487HD_5 0.65
PF01435Peptidase_M48 0.65
PF01176eIF-1a 0.65
PF03951Gln-synt_N 0.65
PF14684Tricorn_C1 0.65
PF01208URO-D 0.65
PF07969Amidohydro_3 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG1704Magnetosome formation protein MamQ, lipoprotein antigen LemA familyCell wall/membrane/envelope biogenesis [M] 1.31
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 1.31
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 0.65
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.65
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.12 %
UnclassifiedrootN/A5.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001086|JGI12709J13192_1001231All Organisms → cellular organisms → Bacteria4035Open in IMG/M
3300002558|JGI25385J37094_10169772All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300002886|JGI25612J43240_1016904All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1078Open in IMG/M
3300002907|JGI25613J43889_10087517All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300003267|soilL1_10173710All Organisms → cellular organisms → Bacteria2655Open in IMG/M
3300004779|Ga0062380_10552040All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005171|Ga0066677_10020733All Organisms → cellular organisms → Bacteria3036Open in IMG/M
3300005177|Ga0066690_10346551All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1007Open in IMG/M
3300005440|Ga0070705_100021206All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300005440|Ga0070705_100510261All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005444|Ga0070694_101215625All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium632Open in IMG/M
3300005450|Ga0066682_10239397All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300005468|Ga0070707_100134122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2409Open in IMG/M
3300005471|Ga0070698_100071411All Organisms → cellular organisms → Bacteria3482Open in IMG/M
3300005471|Ga0070698_101318656All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005518|Ga0070699_100111652All Organisms → cellular organisms → Bacteria2400Open in IMG/M
3300005536|Ga0070697_101536706All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300005536|Ga0070697_101909126All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300005549|Ga0070704_100422691All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300005561|Ga0066699_10397072All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300005566|Ga0066693_10293313All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium649Open in IMG/M
3300005576|Ga0066708_10038831All Organisms → cellular organisms → Bacteria2599Open in IMG/M
3300006031|Ga0066651_10566793All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium602Open in IMG/M
3300006046|Ga0066652_101916070All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006796|Ga0066665_10211173All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300006800|Ga0066660_10302093All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300006844|Ga0075428_100101606All Organisms → cellular organisms → Bacteria3135Open in IMG/M
3300006844|Ga0075428_100123275All Organisms → cellular organisms → Bacteria2821Open in IMG/M
3300006845|Ga0075421_100017579All Organisms → cellular organisms → Bacteria8946Open in IMG/M
3300006845|Ga0075421_100191967All Organisms → cellular organisms → Bacteria2533Open in IMG/M
3300006847|Ga0075431_102223707All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300006852|Ga0075433_11199975All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium658Open in IMG/M
3300006854|Ga0075425_100932819All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium992Open in IMG/M
3300006876|Ga0079217_10184593All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300006903|Ga0075426_10056573All Organisms → cellular organisms → Bacteria2800Open in IMG/M
3300007255|Ga0099791_10141414All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300007265|Ga0099794_10000006All Organisms → cellular organisms → Bacteria130517Open in IMG/M
3300009012|Ga0066710_103309204All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium615Open in IMG/M
3300009090|Ga0099827_11155110All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300009100|Ga0075418_10710316All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300010399|Ga0134127_10084874All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2731Open in IMG/M
3300010399|Ga0134127_10678484All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300010400|Ga0134122_10389230All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1227Open in IMG/M
3300011429|Ga0137455_1086583All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300011433|Ga0137443_1203962All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300011437|Ga0137429_1052277All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300011438|Ga0137451_1055825All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300011442|Ga0137437_1113832All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300011444|Ga0137463_1002808All Organisms → cellular organisms → Bacteria → Proteobacteria5724Open in IMG/M
3300012201|Ga0137365_10007259All Organisms → cellular organisms → Bacteria8834Open in IMG/M
3300012203|Ga0137399_10030276All Organisms → cellular organisms → Bacteria3714Open in IMG/M
3300012203|Ga0137399_10118510All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300012203|Ga0137399_10345516All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1235Open in IMG/M
3300012203|Ga0137399_11455816All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012204|Ga0137374_10080855All Organisms → cellular organisms → Bacteria3147Open in IMG/M
3300012225|Ga0137434_1084150All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300012226|Ga0137447_1126495Not Available519Open in IMG/M
3300012355|Ga0137369_10232153All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300012358|Ga0137368_10082012All Organisms → cellular organisms → Bacteria2568Open in IMG/M
3300012360|Ga0137375_10565617All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300012361|Ga0137360_11891669All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300012532|Ga0137373_10561196All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium865Open in IMG/M
3300012918|Ga0137396_11316600Not Available501Open in IMG/M
3300012930|Ga0137407_10925692All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium825Open in IMG/M
3300012944|Ga0137410_10473178All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300012944|Ga0137410_10503843All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300015256|Ga0180073_1126468All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300015358|Ga0134089_10007752All Organisms → cellular organisms → Bacteria3369Open in IMG/M
3300017997|Ga0184610_1004716All Organisms → cellular organisms → Bacteria3204Open in IMG/M
3300018028|Ga0184608_10128676All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300018031|Ga0184634_10044851All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1807Open in IMG/M
3300018052|Ga0184638_1196993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium710Open in IMG/M
3300018054|Ga0184621_10050770All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300018054|Ga0184621_10149099All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium842Open in IMG/M
3300018056|Ga0184623_10507763All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300018063|Ga0184637_10251750All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300018071|Ga0184618_10000472All Organisms → cellular organisms → Bacteria9255Open in IMG/M
3300018071|Ga0184618_10015972All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2371Open in IMG/M
3300018071|Ga0184618_10112898All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300018071|Ga0184618_10145799All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300018071|Ga0184618_10383323All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium597Open in IMG/M
3300018071|Ga0184618_10396906All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300018074|Ga0184640_10507549All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300018076|Ga0184609_10390077All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300018077|Ga0184633_10085999All Organisms → cellular organisms → Bacteria1620Open in IMG/M
3300018078|Ga0184612_10013599All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4144Open in IMG/M
3300018079|Ga0184627_10064211All Organisms → cellular organisms → Bacteria1913Open in IMG/M
3300018082|Ga0184639_10168344All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300018084|Ga0184629_10578033All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300018482|Ga0066669_10797984All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium836Open in IMG/M
3300018482|Ga0066669_12148376Not Available528Open in IMG/M
3300019259|Ga0184646_1140302All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300019875|Ga0193701_1042489All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300019879|Ga0193723_1000272All Organisms → cellular organisms → Bacteria19695Open in IMG/M
3300019879|Ga0193723_1004002All Organisms → cellular organisms → Bacteria5146Open in IMG/M
3300019880|Ga0193712_1004524All Organisms → cellular organisms → Bacteria2830Open in IMG/M
3300019883|Ga0193725_1002879All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes5000Open in IMG/M
3300019883|Ga0193725_1026428All Organisms → cellular organisms → Bacteria1565Open in IMG/M
3300019886|Ga0193727_1000617All Organisms → cellular organisms → Bacteria13975Open in IMG/M
3300020003|Ga0193739_1000128All Organisms → cellular organisms → Bacteria19948Open in IMG/M
3300020010|Ga0193749_1015081All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300020068|Ga0184649_1537901All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300021073|Ga0210378_10061670All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1474Open in IMG/M
3300021073|Ga0210378_10075213All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300021073|Ga0210378_10087466All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300021073|Ga0210378_10255977All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300021080|Ga0210382_10295361All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium712Open in IMG/M
3300021081|Ga0210379_10024890All Organisms → cellular organisms → Bacteria2289Open in IMG/M
3300021510|Ga0222621_1005740All Organisms → cellular organisms → Bacteria2199Open in IMG/M
3300021972|Ga0193737_1000647All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium4531Open in IMG/M
3300025155|Ga0209320_10214309All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium831Open in IMG/M
3300025324|Ga0209640_10576577All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300025324|Ga0209640_11049131All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium624Open in IMG/M
3300025922|Ga0207646_10121197All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2350Open in IMG/M
3300026285|Ga0209438_1002409All Organisms → cellular organisms → Bacteria6271Open in IMG/M
3300026285|Ga0209438_1095132All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium919Open in IMG/M
3300026295|Ga0209234_1154433All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium811Open in IMG/M
3300026320|Ga0209131_1018118All Organisms → cellular organisms → Bacteria4262Open in IMG/M
3300026327|Ga0209266_1019109All Organisms → cellular organisms → Bacteria3825Open in IMG/M
3300026551|Ga0209648_10037678All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae4195Open in IMG/M
3300027266|Ga0209215_1000362All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae4770Open in IMG/M
3300027587|Ga0209220_1000072All Organisms → cellular organisms → Bacteria53066Open in IMG/M
3300027909|Ga0209382_10009246All Organisms → cellular organisms → Bacteria12356Open in IMG/M
3300027909|Ga0209382_10597856All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300027909|Ga0209382_11692818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium621Open in IMG/M
3300028711|Ga0307293_10035285All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1524Open in IMG/M
3300028784|Ga0307282_10002069All Organisms → cellular organisms → Bacteria7232Open in IMG/M
3300028791|Ga0307290_10059391All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300028793|Ga0307299_10263462All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium647Open in IMG/M
3300030903|Ga0308206_1139257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium576Open in IMG/M
3300030987|Ga0308155_1030744All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300031081|Ga0308185_1035834Not Available611Open in IMG/M
3300031125|Ga0308182_1025636Not Available523Open in IMG/M
3300031965|Ga0326597_10156456All Organisms → cellular organisms → Bacteria2715Open in IMG/M
3300031965|Ga0326597_10168641All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2597Open in IMG/M
3300031965|Ga0326597_10329436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1724Open in IMG/M
3300031965|Ga0326597_10649232All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300031965|Ga0326597_11212706All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300033407|Ga0214472_10072926All Organisms → cellular organisms → Bacteria3440Open in IMG/M
3300033407|Ga0214472_10414178All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300033407|Ga0214472_10542672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1074Open in IMG/M
3300033407|Ga0214472_10969467All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium754Open in IMG/M
3300033417|Ga0214471_10417439All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300033417|Ga0214471_10424986All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300034164|Ga0364940_0012299All Organisms → cellular organisms → Bacteria2093Open in IMG/M
3300034176|Ga0364931_0010862All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2400Open in IMG/M
3300034177|Ga0364932_0012383All Organisms → cellular organisms → Bacteria3198Open in IMG/M
3300034178|Ga0364934_0275595All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium637Open in IMG/M
3300034643|Ga0370545_173017All Organisms → cellular organisms → Bacteria505Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.99%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment14.38%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.76%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.19%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment5.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil3.92%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.31%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.65%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011433Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019880Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020068Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12709J13192_100123133300001086Forest SoilMARRIRFALSLLLVSFALSAAACADATGPSGTTCDTSNPVTCK*
JGI25385J37094_1016977223300002558Grasslands SoilMSRRIRYALSLVLVSFALAASACASATGPSTETCDQSNPVTCHH*
JGI25612J43240_101690423300002886Grasslands SoilMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCENNNPNTCR*
JGI25613J43889_1008751723300002907Grasslands SoilMARRIRFALSLLLVSFAMTAAACADATAPTPSADVTCDHNNPNTCH*
soilL1_1017371043300003267Sugarcane Root And Bulk SoilMSRRIRAALSLLLVSFALTAAACADATAPSADTTCDQNNPATCK*
Ga0062380_1055204023300004779Wetland SedimentMPRRIRALLALFLVSFALSAAACADATAPTPSAEVTCDTNNPNVCR*
Ga0066677_1002073333300005171SoilMTRRIRFALSLVLVSFALAASACASATGPATETCDQSNPVTCHH*
Ga0066690_1034655123300005177SoilMTRRIRFALSLVLVSFALVASACASATGPSTETCDTSNPVTCHH*
Ga0070705_10002120613300005440Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMAAAACADASTGPTPNADTTCDQSNPNTCHH*
Ga0070705_10051026123300005440Corn, Switchgrass And Miscanthus RhizosphereRFALSLLLVSFAMVAAACADASTGPTMNAETTCDQNNPNTCK*
Ga0070694_10121562523300005444Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCEQNNPNTCK*
Ga0066682_1023939713300005450SoilMARRIRFALSLLLVSFAMVASACADATAPTPSADLTCDHNNPVTCH*
Ga0070707_10013412213300005468Corn, Switchgrass And Miscanthus RhizosphereVEALMARRIRFALSLLLVSFAMAAAACADASTGPTPNADTTCDQSNPNTCHH*
Ga0070698_10007141153300005471Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDQNNPNTCK*
Ga0070698_10131865613300005471Corn, Switchgrass And Miscanthus RhizosphereMARRIRFAFSLLLVSFAMVASACADATGPSMNADTTCETSNPNTCK*
Ga0070699_10011165223300005518Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCDQNNPNTCK*
Ga0070697_10153670613300005536Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLVLVSFAMVAAACADATAPAPTADVVCDHNNPNTCK*
Ga0070697_10190912623300005536Corn, Switchgrass And Miscanthus RhizosphereESGGPMSRRIRFALSLVLVSFALTAAACADATGPAHGTCDQNNPVTCH*
Ga0070704_10042269123300005549Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDTNNPNTCK*
Ga0066699_1039707213300005561SoilRRIRFALSLVLVSFALAASACASATGPATETCDTSNPVTCHH*
Ga0066693_1029331323300005566SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAGTTCDTNNPNTCH*
Ga0066708_1003883153300005576SoilMTRRIRFALSLVLVSFALAASACASATGPATETCDTSNPVTCHH*
Ga0066651_1056679323300006031SoilIRFALSLVLVSFALAASACASATGPATETCDQSNPVTCHH*
Ga0066652_10191607023300006046SoilMARRIRFALSLLLVSFAMVASACADASTGPKMNAETTCDTNNPNTCH*
Ga0066665_1021117323300006796SoilVPTQLEFGGPMSRRIRYALSLVLVSFALAASACASATGPSTETCDQSNPVTCHH*
Ga0066660_1030209323300006800SoilMTRRIRFALSLVLVSFALAAPACASATRPATETCDQSNPVTCHH*
Ga0075428_10010160623300006844Populus RhizosphereMSRRIRSVLSLLLVSFAMTAAACADSTAPTPTADVTCDANNPNTCR*
Ga0075428_10012327543300006844Populus RhizosphereMSRRIRFALSLLLVSFAMVASACADATGPTMNADTTCETSNPNTCK*
Ga0075421_10001757923300006845Populus RhizosphereMARRIRFAVSLVLVSFAMALAACADASTGPQMNAETTCDQNNPNTCK*
Ga0075421_10019196743300006845Populus RhizosphereMSRRIRSALSLLLVSFAMTAAACADSTAPTPTADVTCDANNPNTCR*
Ga0075431_10222370713300006847Populus RhizosphereMARRIRFALSLLLVSFAMVASACADATGPTMNADTTCDQNNPNTCK*
Ga0075433_1119997523300006852Populus RhizosphereMARRIRFALSLLLVSFAMAAAACADASTGPTMNADTTCDQNNPNTCK*
Ga0075425_10093281923300006854Populus RhizosphereMSRRIRFALSLLLVSFAMVASACADATGPKMNAETTCEQNNPNTCK*
Ga0079217_1018459323300006876Agricultural SoilMSRRIRYALSLLLVSFALTAAACADATGPRAETVCDTNNPATCK*
Ga0075426_1005657323300006903Populus RhizosphereMARRIRFALSLLLVSFAMAAAACADATAPTPSADVTCDHNNPNTCH*
Ga0099791_1014141423300007255Vadose Zone SoilMARRIRFALSLLLVSFAMAAAACADSTAPTPNADTTCDQSNPNTCHH*
Ga0099794_10000006693300007265Vadose Zone SoilMTRRIRFALSLVLVSFALAASACASPTAPRTQTCDTNNPVTCH*
Ga0066710_10330920413300009012Grasslands SoilLMARRIRFALSLLLVSFAMTAAACADATAPAPSADVTCDHNNPNTCH
Ga0099827_1115511023300009090Vadose Zone SoilMARRIRFALSLLLVSFAMTAAACADASTGPKMNAETTCDQNNPNTCH*
Ga0075418_1071031623300009100Populus RhizosphereLMSRRIRSALSLLLVSFAMTAAACADSTAPTPTADVTCDANNPNTCR*
Ga0134127_1008487413300010399Terrestrial SoilLTVEALMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCDQNNPNTCK*
Ga0134127_1067848423300010399Terrestrial SoilMSRRIRYALSLLLVSFALTAAACADATAPSAETTCDQNNPATCK*
Ga0134122_1038923023300010400Terrestrial SoilMARRIRFALSLLLVSFAMVAAACADASTGPQMNAETTCDQNNPNTCK*
Ga0137446_113624023300011419SoilMARRIRFAVSLVLVSFALVAAACADASTGPQMNAE
Ga0137455_108658323300011429SoilMARRIRFALSLLLVSFALTAAACADATAPTPTADVVCDHNNPNTCK*
Ga0137443_120396213300011433SoilMARRIRFAVSLVLVSFALVAAACADASTGPQMNAETTCDQNNPNTCK*
Ga0137429_105227713300011437SoilIQPDRGGVMARRIRFALVLFLVSFALSAAACADASGPSETTCDQNNPLCK*
Ga0137451_105582523300011438SoilMARRIRFALSLVLVSFAMVAAACADATAPTPSAEVVCDHNNPNVCK*
Ga0137437_111383223300011442SoilRIRFALSLVLVSFAMVAAACADASTGPTMNAETTCDQSNPNTCK*
Ga0137463_100280873300011444SoilMARRIRFAFSLVLVSFAMVAAACADASTGPTMNAETTCDHNNPNTCH*
Ga0137365_1000725973300012201Vadose Zone SoilMARRIRFALSLLLVSFAMVASACADATAPTPSADLTCDQNNPNTCH*
Ga0137399_1003027653300012203Vadose Zone SoilMARRIRFALSLLLVSFAMAAAACADATAPTPSADLVCDTSNPNVCHH*
Ga0137399_1011851033300012203Vadose Zone SoilMTRRIRFALSLVLVSFALAASACASATGPVANTTCDQNNPVTCH*
Ga0137399_1034551623300012203Vadose Zone SoilMARRIRFAFSLLLVSFAMVASACADASTGPTMNAETTCEQNNPNTCH*
Ga0137399_1145581623300012203Vadose Zone SoilMARRIRFALSLLLVSFAFAAAACADATAPTASADLVCDQSNPVTCR*
Ga0137374_1008085553300012204Vadose Zone SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDQSNPNTCR*
Ga0137434_108415013300012225SoilMARRIRFALSLVLVSFAMALAACADASTGPQMNAETTCDQSNPNTCK*
Ga0137447_112649523300012226SoilMARRIRFALSLVLVSFALTAAACADATGPRAETTCDTNNPAVCK*
Ga0137369_1023215323300012355Vadose Zone SoilMARRIRFALSLLLVSFAMVASACADASTGPAMNAETTCDQSNPNTCR*
Ga0137368_1008201253300012358Vadose Zone SoilMSRQFRALAALLLVSFALSASACADATAPTASAHLVCAHNNPNICR*
Ga0137375_1056561713300012360Vadose Zone SoilMSRQIRALAALLLVSFALSAAACADATAPTPSADLVCDQNNPNICR*
Ga0137360_1189166923300012361Vadose Zone SoilMARRIRFALSLLLVSFAMTAAASADASTGRKMNAETTCDT
Ga0137373_1056119623300012532Vadose Zone SoilHGGIMSRRIRFALALVLVSFALTAAACADATAPTPKVCDHSNPITC*
Ga0137396_1131660013300012918Vadose Zone SoilMERRIRFALSLLLVSFAMAAAACADSTAPTPNADTTCDQSNPNTCHH*
Ga0137407_1092569223300012930Vadose Zone SoilMARRIRFALSLLLVSFAMAAAACADASTGPTMNAETTCEQNNPNTCR*
Ga0137410_1047317823300012944Vadose Zone SoilMARRIRFALSLLLVSFAMAAAACADATAPTPSADLVCDTSNPNVCHN*
Ga0137410_1050384323300012944Vadose Zone SoilLMARRIRFALSLLLVSFALTAAACADATAPTPSADVTCDVSNPVTCR*
Ga0180073_112646823300015256SoilMARRIRFALSLLLVSFALTAAACADATAPTPTADVTCDTNNPNLCK*
Ga0134089_1000775263300015358Grasslands SoilMSRRIRYALSLVLVSFALAASACASATGPATETCDQSNPVTCHH*
Ga0184610_100471643300017997Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATGPRAETCDTSNPGVC
Ga0184608_1012867613300018028Groundwater SedimentAPMARRIRFALSLVLVSFAMVAAACADASTGPQMNAETVCDHNNPNVCK
Ga0184634_1004485123300018031Groundwater SedimentMARRIRFALSLVLVSFALVTAACADASTGPTMSAETVCDTSNPHTCK
Ga0184638_119699323300018052Groundwater SedimentMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCDQNNPNTCK
Ga0184621_1005077023300018054Groundwater SedimentMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCEQNNPNTCK
Ga0184621_1014909923300018054Groundwater SedimentMARRIRFALSLVLVSFAMVAAACADASTGPTMNAETVCDHNNPNVCK
Ga0184623_1050776313300018056Groundwater SedimentMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETVCDTSNPNTCK
Ga0184637_1025175023300018063Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATGPSAGICDQSNPAVCK
Ga0184618_1000047233300018071Groundwater SedimentMTRRIRALLSLLLVSFALSVAACADATAPTPTADVTCDVSNPVTCR
Ga0184618_1001597223300018071Groundwater SedimentMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDQNNPNTCHK
Ga0184618_1003441243300018071Groundwater SedimentMARRIRFALSLVLVSFAMVAAACADASTGPQMNAE
Ga0184618_1011289823300018071Groundwater SedimentTVEAPMARRIRFALSLVLVSFAMVAAACADASTGPQMNAETICDQSNPNTCK
Ga0184618_1014579923300018071Groundwater SedimentTVEAPMARRIRFALSLVLVSFAMVAAACADASTGPQMNAETVCDHNNPNVCK
Ga0184618_1038332313300018071Groundwater SedimentMARRIRFALSLLLVSFAMAAAACADASTGPTMNAETTCDHNNPNTCR
Ga0184618_1039690623300018071Groundwater SedimentMIRRIRALLSLLLVSFALSAAACADATAPTPSADVLCDQNNPVTCR
Ga0184640_1050754913300018074Groundwater SedimentMARRIRFAVSLVLVSFALVAAACADTSTGPQMNAETTCEQNNPNTCR
Ga0184609_1039007723300018076Groundwater SedimentMARRIRFALSLLLVSFAFAATACADASTGPTLNAETTCGQNNPNTCK
Ga0184633_1008599913300018077Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATGPRGICDTNNPSVCK
Ga0184612_1001359933300018078Groundwater SedimentMARRIRFALSLLLVSFAMAAAACADASTGPTMNAETTCENNNPNTCK
Ga0184627_1006421123300018079Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATGPRGICDTSNPAVCH
Ga0184639_1016834423300018082Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATGPSAGICDTNNPAVCR
Ga0184629_1057803323300018084Groundwater SedimentMARRIRFAVSLVLVSFAMVAAACADATAPTPSAEVVCDHNNPNVCK
Ga0066669_1079798423300018482Grasslands SoilMTRRIRFALSLVLVSFALAASACASATGPATETCDQSNPVTCHH
Ga0066669_1214837623300018482Grasslands SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAGTTCDTNNPNTCH
Ga0184646_114030213300019259Groundwater SedimentMNRRIRALLSLLLVSFAMSVAACADATAPTPSAELTCDVSNPNVCR
Ga0193701_104248923300019875SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCEQNNPNT
Ga0193723_100027263300019879SoilMARRIRFALSLLLVSFAMVAAACADASTGPTPNAETTCEQNNPNTCR
Ga0193723_100400233300019879SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDHNNPNTCK
Ga0193712_100452433300019880SoilMARRIRFALSLLLVSFAMVAAACADASTGPTMSAETTCDQNNPNTCK
Ga0193713_102337113300019882SoilMARRIRFAFSLLLVSFAMVASACADASTGPTMNAET
Ga0193725_100287953300019883SoilMARRIRFAFSLLLVSFAMVAAACADASTGPVSAETTCEQNNPNTCK
Ga0193725_102642823300019883SoilPPILTVEALMARRIRFALSLLLVSFAMVAAACADATAPTPSADLTCDTSNPNVCHH
Ga0193727_1000617133300019886SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDTNNPNTCHH
Ga0193739_1000128113300020003SoilMARRIRFALSLVLVSFALATAACADASTGPTMNAETVCDQSNPNTCK
Ga0193749_101508113300020010SoilPILTVEALMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDTSNPNTCH
Ga0184649_153790123300020068Groundwater SedimentMTRRIRALLSLLLVSFALSAAACADATAPTPSADLTCDQNNPNICK
Ga0210378_1006167023300021073Groundwater SedimentMARRIRFALSLLLVSFAFAATACADASTGPTMNAETTCDQNNPNTCK
Ga0210378_1007521313300021073Groundwater SedimentMARRIRFALSLVLVSFAMVAAACADASTGPQMNAETICDQSNP
Ga0210378_1008746613300021073Groundwater SedimentLTVEAPMARRIRFALSLVLVSFAMVAAACADASTGPQMNAETVCDHNNPNVCK
Ga0210378_1025597723300021073Groundwater SedimentMARRIRFAVSLVLVSFAMVAAACADATAPAPTADVTCDHNNPNVCK
Ga0210382_1029536123300021080Groundwater SedimentMTRRIRALLSLLLVSFALSAAACADATAPAPSADLTCDQSNPVTCR
Ga0210379_1002489043300021081Groundwater SedimentMVRRIRFALSLVLVSFAMVAAACADASTGPQMNAETTCDTNNPNTCK
Ga0222621_100574033300021510Groundwater SedimentMARRIRFALSLLLVSFALSAAACADATAPTPTAELTCDVNNPNVCHK
Ga0193737_100064723300021972SoilMARRIRFALSLVLVSFAMALAACADASTGPQMNAETVCDHNNPNTCK
Ga0209320_1021430923300025155SoilMIRRIRALLSLLLVSFALTAAACADATAPTPSAELTCDQNNPNICK
Ga0209640_1057657723300025324SoilMSRRIRFAVSLVLVSFALSTAACADATAPRADTVCDHNNPATCK
Ga0209640_1104913123300025324SoilMSRRIRALLSLLFVSFALTAAACADATAPTPSAELTCDQNNPNICK
Ga0207646_1012119723300025922Corn, Switchgrass And Miscanthus RhizosphereMARRIRFALSLLLVSFAMAAAACADASTGPTPNADTTCDQSNPNTCHH
Ga0209438_100240963300026285Grasslands SoilMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCENNNPNTCR
Ga0209438_109513223300026285Grasslands SoilMARRIRFALSLLLVSFAMVAAACADASTGPTMNAETTCDTSNPNTCHH
Ga0209234_115443323300026295Grasslands SoilMTRRIRFALSLVLVSFALAASACASATGPATETCDTSNPVTCHH
Ga0209131_101811833300026320Grasslands SoilMARRIRFALSLLLVSFAMTAAACADATAPTPSADVTCDHNNPNTCH
Ga0209266_101910923300026327SoilMSRRIRYALSLVLVSFALAASACASATGPSTETCDQSNPVTCHH
Ga0209648_1003767843300026551Grasslands SoilMSRRIRFALSLVLVSFALAASACASATGPSTETCDTNNPATCHH
Ga0209215_100036223300027266Forest SoilMARRIRFALVLFLVSVALSAAACADASGPAADTTCDHNNPIC
Ga0209220_1000072263300027587Forest SoilMARRIRFALSLLLVSFALSAAACADATGPSGTTCDTSNPVTCK
Ga0209382_10009246123300027909Populus RhizosphereMARRIRFAVSLVLVSFAMALAACADASTGPQMNAETTCDQNNPNTCK
Ga0209382_1059785623300027909Populus RhizosphereMSRRIRSALSLLLVSFAMTAAACADSTAPTPTADVTCDANNPNTCR
Ga0209382_1169281823300027909Populus RhizosphereLLVSFAMAAAACADASTGPQMNADTTCEQNNPNTCR
Ga0307293_1003528523300028711SoilMARRIRFALSLLLVSFAMAAAACADASTGPTMNADTTCENNNPNTCK
Ga0307282_1000206963300028784SoilMARRIRFALSLLLVSFAMVASACADASTGPQMNAETTCDTNNPNTCHH
Ga0307290_1005939123300028791SoilILTVEALMARRIRFALSLLLVSFAMAAAACADASTGPTMNADTTCENNNPNTCK
Ga0307299_1026346213300028793SoilRFALSLVLVSFAMVAAACADASTGPQMNAETVCDHNNPNVCK
Ga0307308_1007368443300028884SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAE
Ga0308206_113925713300030903SoilMARRIRLALSLVLVSFAMVAAACADATAPTPTADVTCDTSNPHTCK
Ga0308155_103074423300030987SoilPNLTVEAPMARRIRFALSLLLVSFALSAAACADATAPTPTAELTCDVNNPNVCHK
Ga0308185_103583423300031081SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDTNNPNTCHK
Ga0308182_102563623300031125SoilMARRIRFALSLLLVSFAMVASACADASTGPTMNAETTCDHSNPNTCR
Ga0326597_1015645623300031965SoilMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTSNPWTCKS
Ga0326597_1016864143300031965SoilMIRRIRALLSLLLVSFALTAAACADATAPTPSAELTCDVNNPNVCK
Ga0326597_1032943623300031965SoilMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTNNPWTCKS
Ga0326597_1064923213300031965SoilMIRRIRALLSLLLVSFALTAAACADATAPTPSAEVTCDQNNPNTCK
Ga0326597_1121270623300031965SoilGLMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDQNNPWVCKS
Ga0214472_1007292643300033407SoilMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTSNPYICKN
Ga0214472_1041417813300033407SoilRRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTNNPYICKN
Ga0214472_1054267223300033407SoilMARRIRYALSLLLVSFALSAAACADATAPTMSAPSAEQTCDINNPWVCKS
Ga0214472_1096946723300033407SoilMARRIRFALSLLLVSFALTAAACADATAPTPSAELTCEQNNPNTCK
Ga0214471_1041743923300033417SoilMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTSNPWVCKS
Ga0214471_1042498613300033417SoilGGLMARRIRYALSLLLVSFALSAAACADATAPTPSADVVCDTNNPWTCKS
Ga0364940_0012299_293_4333300034164SedimentMARRIRFALSLLLVSFALTAAACADATAPTPSADVTCDTSNPNTCK
Ga0364931_0010862_2133_22763300034176SedimentMARRIRFALSLALVSFAMVAAACADASTGPQMNAETTCDTNNPNTCK
Ga0364932_0012383_676_8163300034177SedimentMARRIRFALSLLLVSFALTAAACADATAPTPSADVVCDHNNPNVCK
Ga0364934_0275595_1_1263300034178SedimentRFAVSLVLVSFAMVAAACADATAPTPSAEVVCDHNNPNVCK
Ga0370545_173017_19_1623300034643SoilMARRIRFALSLLLVSFAMAAAACADATAPTPSADVTCDQSNPNTCHH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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