NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F045001

Metagenome / Metatranscriptome Family F045001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045001
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 37 residues
Representative Sequence LRRLTPLSGLQEDILQRLGLGASLYRQLEIQEIGN
Number of Associated Samples 109
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.66 %
% of genes near scaffold ends (potentially truncated) 98.69 %
% of genes from short scaffolds (< 2000 bps) 86.93 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (70.588 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(43.791 % of family members)
Environment Ontology (ENVO) Unclassified
(45.098 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.248 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.10%    β-sheet: 0.00%    Coil/Unstructured: 61.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF01609DDE_Tnp_1 2.61
PF03050DDE_Tnp_IS66 1.96
PF13546DDE_5 1.96
PF03400DDE_Tnp_IS1 1.96
PF13592HTH_33 1.31
PF01656CbiA 1.31
PF14319Zn_Tnp_IS91 1.31
PF13565HTH_32 1.31
PF07592DDE_Tnp_ISAZ013 1.31
PF00881Nitroreductase 1.31
PF12697Abhydrolase_6 0.65
PF13613HTH_Tnp_4 0.65
PF03330DPBB_1 0.65
PF08241Methyltransf_11 0.65
PF02518HATPase_c 0.65
PF13649Methyltransf_25 0.65
PF01610DDE_Tnp_ISL3 0.65
PF10282Lactonase 0.65
PF01526DDE_Tnp_Tn3 0.65
PF05195AMP_N 0.65
PF13384HTH_23 0.65
PF06114Peptidase_M78 0.65
PF09969DUF2203 0.65
PF08240ADH_N 0.65
PF14261DUF4351 0.65
PF13544Obsolete Pfam Family 0.65
PF04014MazE_antitoxin 0.65
PF02281Dimer_Tnp_Tn5 0.65
PF01370Epimerase 0.65
PF01051Rep_3 0.65
PF13924Lipocalin_5 0.65
PF13419HAD_2 0.65
PF01844HNH 0.65
PF01522Polysacc_deac_1 0.65
PF04255DUF433 0.65
PF14690zf-ISL3 0.65
PF04199Cyclase 0.65
PF01436NHL 0.65
PF04851ResIII 0.65
PF00534Glycos_transf_1 0.65
PF13020NOV_C 0.65
PF05598DUF772 0.65
PF14104DUF4277 0.65
PF03781FGE-sulfatase 0.65
PF05685Uma2 0.65
PF01381HTH_3 0.65
PF13612DDE_Tnp_1_3 0.65
PF06782UPF0236 0.65
PF13401AAA_22 0.65
PF03958Secretin_N 0.65
PF06537DHOR 0.65
PF00589Phage_integrase 0.65
PF13431TPR_17 0.65
PF00528BPD_transp_1 0.65
PF13551HTH_29 0.65
PF00664ABC_membrane 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 2.61
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 2.61
COG5421TransposaseMobilome: prophages, transposons [X] 2.61
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 2.61
COG3293TransposaseMobilome: prophages, transposons [X] 2.61
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 2.61
COG3436TransposaseMobilome: prophages, transposons [X] 1.96
COG1662Transposase and inactivated derivatives, IS1 familyMobilome: prophages, transposons [X] 1.96
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.65
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 0.65
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.65
COG3464TransposaseMobilome: prophages, transposons [X] 0.65
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 0.65
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.65
COG4644Transposase and inactivated derivatives, TnpA familyMobilome: prophages, transposons [X] 0.65
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.65
COG5527Protein involved in initiation of plasmid replicationMobilome: prophages, transposons [X] 0.65
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.65


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.59 %
UnclassifiedrootN/A29.41 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_10381585Not Available648Open in IMG/M
3300004016|Ga0058689_10161802All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005178|Ga0066688_11028515All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005574|Ga0066694_10069185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1625Open in IMG/M
3300005576|Ga0066708_10470077All Organisms → cellular organisms → Bacteria → Terrabacteria group809Open in IMG/M
3300005598|Ga0066706_10813719All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300005764|Ga0066903_107031525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria583Open in IMG/M
3300006796|Ga0066665_11364507All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300006844|Ga0075428_101326244All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis756Open in IMG/M
3300006847|Ga0075431_100972655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium816Open in IMG/M
3300006880|Ga0075429_101381846Not Available613Open in IMG/M
3300006969|Ga0075419_10222622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1254Open in IMG/M
3300007004|Ga0079218_11028887All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300007255|Ga0099791_10023955Not Available2642Open in IMG/M
3300007255|Ga0099791_10526944All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Doudnabacteria575Open in IMG/M
3300007258|Ga0099793_10677108All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300009012|Ga0066710_100630063All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300009012|Ga0066710_104300091Not Available532Open in IMG/M
3300009038|Ga0099829_10299145All Organisms → cellular organisms → Bacteria1319Open in IMG/M
3300009038|Ga0099829_10826161All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300009038|Ga0099829_11713227Not Available516Open in IMG/M
3300009089|Ga0099828_10028886Not Available4442Open in IMG/M
3300009089|Ga0099828_10371931Not Available1288Open in IMG/M
3300009089|Ga0099828_10635530Not Available960Open in IMG/M
3300009090|Ga0099827_10201659All Organisms → cellular organisms → Bacteria1655Open in IMG/M
3300009090|Ga0099827_10274683All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300009090|Ga0099827_10357412Not Available1243Open in IMG/M
3300009090|Ga0099827_11319421All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300009090|Ga0099827_11710487All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300009090|Ga0099827_11901864All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300009100|Ga0075418_10153220All Organisms → cellular organisms → Bacteria2453Open in IMG/M
3300009100|Ga0075418_11155841All Organisms → cellular organisms → Bacteria → Terrabacteria group838Open in IMG/M
3300009137|Ga0066709_100154822All Organisms → cellular organisms → Bacteria2939Open in IMG/M
3300009137|Ga0066709_100496657All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1717Open in IMG/M
3300009143|Ga0099792_10499309All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium762Open in IMG/M
3300009146|Ga0105091_10094322All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1366Open in IMG/M
3300009147|Ga0114129_10346252Not Available1970Open in IMG/M
3300009156|Ga0111538_12853937All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300009156|Ga0111538_12955915Not Available594Open in IMG/M
3300009553|Ga0105249_11909085Not Available666Open in IMG/M
3300009691|Ga0114944_1128528Not Available983Open in IMG/M
3300009792|Ga0126374_11394554Not Available570Open in IMG/M
3300009809|Ga0105089_1083551All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300009813|Ga0105057_1078594All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Nitrococcus → Nitrococcus mobilis → Nitrococcus mobilis Nb-231583Open in IMG/M
3300009815|Ga0105070_1119732All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300009815|Ga0105070_1121405All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300010046|Ga0126384_12060586Not Available547Open in IMG/M
3300010360|Ga0126372_11436289All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300010362|Ga0126377_10476593All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → unclassified Methylocaldum → Methylocaldum sp.1275Open in IMG/M
3300010398|Ga0126383_11338107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300011269|Ga0137392_10937524Not Available712Open in IMG/M
3300011270|Ga0137391_11117559All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300011270|Ga0137391_11385838Not Available549Open in IMG/M
3300011422|Ga0137425_1037537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_61066Open in IMG/M
3300012189|Ga0137388_11444852Not Available626Open in IMG/M
3300012199|Ga0137383_10137797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_41784Open in IMG/M
3300012199|Ga0137383_11317155Not Available514Open in IMG/M
3300012201|Ga0137365_10087280All Organisms → cellular organisms → Bacteria2349Open in IMG/M
3300012201|Ga0137365_11211957Not Available539Open in IMG/M
3300012204|Ga0137374_10191783All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae1770Open in IMG/M
3300012205|Ga0137362_10261036All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300012206|Ga0137380_11475781Not Available565Open in IMG/M
3300012209|Ga0137379_10235540Not Available1744Open in IMG/M
3300012209|Ga0137379_10406737All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300012209|Ga0137379_11211939All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012210|Ga0137378_10423146All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1235Open in IMG/M
3300012210|Ga0137378_10494674Not Available1130Open in IMG/M
3300012210|Ga0137378_11418686Not Available607Open in IMG/M
3300012210|Ga0137378_11670381All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300012211|Ga0137377_10738138All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300012211|Ga0137377_10896915All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp.818Open in IMG/M
3300012349|Ga0137387_10079642All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2249Open in IMG/M
3300012359|Ga0137385_10908198All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Jacksonbacteria → Candidatus Jacksonbacteria bacterium728Open in IMG/M
3300012359|Ga0137385_11486446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300012359|Ga0137385_11525421All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina532Open in IMG/M
3300012361|Ga0137360_10663652Not Available894Open in IMG/M
3300012362|Ga0137361_10470865Not Available1154Open in IMG/M
3300012362|Ga0137361_10526440All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300012363|Ga0137390_10956341All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis810Open in IMG/M
3300012582|Ga0137358_11018580Not Available534Open in IMG/M
3300012685|Ga0137397_11286495Not Available521Open in IMG/M
3300012917|Ga0137395_10271508All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300012918|Ga0137396_10020780All Organisms → cellular organisms → Bacteria → Proteobacteria4211Open in IMG/M
3300012922|Ga0137394_10797336Not Available792Open in IMG/M
3300012923|Ga0137359_10135451All Organisms → cellular organisms → Bacteria → Proteobacteria2192Open in IMG/M
3300012929|Ga0137404_10001899All Organisms → cellular organisms → Bacteria13755Open in IMG/M
3300012929|Ga0137404_10955105All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium783Open in IMG/M
3300012948|Ga0126375_11150520Not Available642Open in IMG/M
3300012971|Ga0126369_10046042All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor3697Open in IMG/M
3300012971|Ga0126369_10557663All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300012971|Ga0126369_13602545Not Available507Open in IMG/M
3300013306|Ga0163162_12658696All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300014154|Ga0134075_10433268All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300018063|Ga0184637_10104380Not Available1745Open in IMG/M
3300018071|Ga0184618_10022838Not Available2071Open in IMG/M
3300021073|Ga0210378_10342439All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300021086|Ga0179596_10250781All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300021476|Ga0187846_10366154All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300025910|Ga0207684_10060761All Organisms → cellular organisms → Bacteria3210Open in IMG/M
3300025916|Ga0207663_11534546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi536Open in IMG/M
3300025922|Ga0207646_10073392Not Available3056Open in IMG/M
3300025961|Ga0207712_10833424Not Available812Open in IMG/M
3300026296|Ga0209235_1244370All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300026310|Ga0209239_1055610All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales1770Open in IMG/M
3300026325|Ga0209152_10505816Not Available500Open in IMG/M
3300026333|Ga0209158_1331037All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300026358|Ga0257166_1041361All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300026528|Ga0209378_1086581All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina1405Open in IMG/M
3300026537|Ga0209157_1386509All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300027655|Ga0209388_1094348All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300027655|Ga0209388_1184474All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300027655|Ga0209388_1232308Not Available505Open in IMG/M
3300027675|Ga0209077_1159853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300027875|Ga0209283_10617210All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia686Open in IMG/M
3300027875|Ga0209283_10630040All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella677Open in IMG/M
3300027875|Ga0209283_10686955Not Available641Open in IMG/M
3300027882|Ga0209590_10052122All Organisms → cellular organisms → Bacteria2285Open in IMG/M
3300027882|Ga0209590_10106858All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300027882|Ga0209590_10421178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Okeania → unclassified Okeania → Okeania sp. SIO3B3863Open in IMG/M
3300027882|Ga0209590_10547860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi746Open in IMG/M
3300027882|Ga0209590_10605538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium crusticola705Open in IMG/M
3300027882|Ga0209590_10721507All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300027882|Ga0209590_10787487Not Available605Open in IMG/M
3300027882|Ga0209590_10946832All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium540Open in IMG/M
3300027909|Ga0209382_10007192All Organisms → cellular organisms → Bacteria14231Open in IMG/M
3300027961|Ga0209853_1153506All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis555Open in IMG/M
3300028587|Ga0247828_10019959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2613Open in IMG/M
3300028717|Ga0307298_10021801All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300028814|Ga0307302_10127209All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300028828|Ga0307312_11136351Not Available517Open in IMG/M
3300030006|Ga0299907_10782943All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300030619|Ga0268386_11013055All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300030905|Ga0308200_1062254All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella723Open in IMG/M
3300031094|Ga0308199_1034379All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300031547|Ga0310887_10035004All Organisms → cellular organisms → Bacteria2138Open in IMG/M
3300031573|Ga0310915_10179647All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300031890|Ga0306925_11160628All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300031901|Ga0307406_10687943All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300031912|Ga0306921_10361396Not Available1697Open in IMG/M
3300032001|Ga0306922_10253096All Organisms → cellular organisms → Bacteria1893Open in IMG/M
3300032004|Ga0307414_11674995Not Available593Open in IMG/M
3300032075|Ga0310890_10533429All Organisms → cellular organisms → Bacteria → Proteobacteria898Open in IMG/M
3300032180|Ga0307471_102112731Not Available708Open in IMG/M
3300032180|Ga0307471_103050906All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300032261|Ga0306920_103905879All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300033289|Ga0310914_11388027Not Available605Open in IMG/M
3300033289|Ga0310914_11469536All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix nivea585Open in IMG/M
3300033407|Ga0214472_10000291All Organisms → cellular organisms → Bacteria64544Open in IMG/M
3300033407|Ga0214472_10050476All Organisms → cellular organisms → Bacteria4213Open in IMG/M
3300033550|Ga0247829_11145927All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300033551|Ga0247830_10610620All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella863Open in IMG/M
3300034176|Ga0364931_0341247All Organisms → cellular organisms → Bacteria500Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil43.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.27%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.31%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.31%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.31%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.65%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.65%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.65%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.65%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.65%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.65%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1038158513300000550SoilEEILRRLTPLSGVQEDILQRQGLGTSLYGQLEIQVMGN*
Ga0058689_1016180223300004016AgaveTGEDILRRLTPLSGLQEDILQRLGLGAALYGQLEIQGMGT*
Ga0066688_1102851523300005178SoilTGEDILRRLTPLSALQKDILQRLGLGASLYGQLEIQEMRN*
Ga0066694_1006918513300005574SoilEILRRLTPLSALQEDILQRLGFGASLYGQLEIQEMGN*
Ga0066708_1047007713300005576SoilAGEDMLRRLTPLSGLQADILQRLGLGATLYGQLEIQATGT*
Ga0066706_1081371913300005598SoilEEILRRLTSLSGLQEDILQRLGLGASLYGQLEIQEMRN*
Ga0066903_10703152513300005764Tropical Forest SoilRRLTPLSGLQEDILQRLGLGASLYGQLEIQEMGN*
Ga0066665_1136450723300006796SoilRRLTPLSGLQEDILQRLGLGATLYGQLEIQTIGI*
Ga0075428_10132624413300006844Populus RhizosphereEEILRRLTPLSRVQEAILQRLGLGTNLYRQLEIQNMES*
Ga0075431_10097265513300006847Populus RhizosphereLRRLTPLSGLQEEILQRLGLGVTLYRQLEIQAIGT*
Ga0075429_10138184623300006880Populus RhizosphereTNAAGENIIRRLTPLSGLQEDILQRLGLGTALYRQLEI*
Ga0075419_1022262213300006969Populus RhizosphereRRLTPLSGVQEDILQRLGLGAALYGQLEIPAIGT*
Ga0079218_1102888723300007004Agricultural SoilRRMTPLAGGQETILQRLGLGTQLYRQLAIPHMGS*
Ga0099791_1002395513300007255Vadose Zone SoilDILRRLTPLSGLQEDILQRLGLGAALYEQLEIQGIGT*
Ga0099791_1052694413300007255Vadose Zone SoilAAGEDILRYLTPLSGLQEDILQRLGLGAALYGQLEIQTIGN*
Ga0099793_1067710813300007258Vadose Zone SoilDILRRLTPLPGVQEAFLQRLGLGTNLYRQLEIQNMKS*
Ga0066710_10063006313300009012Grasslands SoilLRRLTPLSGLQADILQRLGLGATLYGQLEIQATGT
Ga0066710_10430009113300009012Grasslands SoilAAGEDILRRLTPLSGLQEDILQRLGLGAALYEQLEIQAIGH
Ga0099829_1029914513300009038Vadose Zone SoilNAAGEEILRRLTPLSGVQEDILQRLGLGTALYRQLEIQEMGN*
Ga0099829_1082616123300009038Vadose Zone SoilRRLTPLSGLQEEILQRLGLGTSLYRQLEIQEIGN*
Ga0099829_1171322713300009038Vadose Zone SoilRRLTPLSGVQEDILQRLGLGTALYRQLEIQDIGN*
Ga0099828_1002888663300009089Vadose Zone SoilRRLTPRSALQEDILQRLGLGASLYRQLEIQEMGN*
Ga0099828_1037193123300009089Vadose Zone SoilRRLTPLSGLQEDILQRLGLGAALYGQLEIEGIRN*
Ga0099828_1063553013300009089Vadose Zone SoilTAGEEILRRLTPLSGLQEEILQRLGLGTSLYRQLEIQEIGN*
Ga0099827_1020165933300009090Vadose Zone SoilRRLTPRSAIKEDILQRLGSGASLYRQLEIQEMGN*
Ga0099827_1027468333300009090Vadose Zone SoilLRRLTPLSGLQEDILQRLGLGATLYAQLEMQAIGT*
Ga0099827_1035741243300009090Vadose Zone SoilLRRLTPLSGLQEDILQRLGLGTTLYRQLEIQVIGT*
Ga0099827_1131942113300009090Vadose Zone SoilRRLTPLSGVQEAILQRLGLGAALYGQLAIQNMRS*
Ga0099827_1171048713300009090Vadose Zone SoilNAAGEEILRRLTPLSGVQEDILQRLGLGTALYRQLEIQEMDN*
Ga0099827_1190186423300009090Vadose Zone SoilLRRLTPLSGVQETILQCLGLGTSLYRQLEIQGIGN*
Ga0075418_1015322043300009100Populus RhizosphereRRLTPLSSLQQEVLRRLGLETSLYRQLEIHDMGN*
Ga0075418_1115584123300009100Populus RhizosphereILRRLTPLSALQEDILQRLGLGVTLYRQLEIQTIEV*
Ga0066709_10015482243300009137Grasslands SoilGEDILRRLTPLSGLQEDILQRLGLGAALYGQLEMQAIGN*
Ga0066709_10049665713300009137Grasslands SoilRRLTPLSGLQEAILQRLGLGTHLYRQLEIQNMRS*
Ga0099792_1049930913300009143Vadose Zone SoilLRRLTPLAWLQEDILQRLGLGATLYAQLEIQAMGN*
Ga0105091_1009432243300009146Freshwater SedimentRRLTPLSGVQEDILQRLGLGATLYGQLEIQAIEA*
Ga0114129_1034625253300009147Populus RhizosphereRRLTSLSGLQEDILQRLGLDASLYGQLEIQEMGN*
Ga0111538_1285393713300009156Populus RhizosphereGEEILRRLTPLSRVQEAILQRLGLGTNLYRQLEIQNMES*
Ga0111538_1295591513300009156Populus RhizosphereDILRRLTPLSGVQEDLLQRLGCGALLYGQLAIQTIGI*
Ga0105249_1190908513300009553Switchgrass RhizosphereQRLTPLSALQQDILQRLGLDPFLYQQLEIHDTGN*
Ga0114944_112852813300009691Thermal SpringsIIKTATGEDILRRLTPLSALQQDILRRLGLGTSLY*
Ga0126374_1139455423300009792Tropical Forest SoilAGEDILRRLTPLSGLQEDILQRLGWGAALYRQLEMQVIGT*
Ga0105089_108355113300009809Groundwater SandRRLTPLSRVQEAILQRLGLGTTLYRQLEMQNMES*
Ga0105057_107859413300009813Groundwater SandLRRLPPLARVQEDILHRLGLGASLYRQLDIQEMGS*
Ga0105070_111973213300009815Groundwater SandRRLTPLSGLQEDILQRLGLGAALYGQLEIQTIGN*
Ga0105070_112140513300009815Groundwater SandTGEDILRRLTPLSGVQEDILQRLGLGTALYRQLEIQEIGN*
Ga0126384_1206058613300010046Tropical Forest SoilAAGEDILRRLTPLAGLQEDILQRLGLGAALYRQLEIQASGT*
Ga0126372_1143628923300010360Tropical Forest SoilRRLTPLSGLQEDILQRLGLGVALYGQLEIQGSGT*
Ga0126377_1047659333300010362Tropical Forest SoilAAGEEILRRLTSLSGLQAHILQRLGLGAALYGQLEIQEMGN*
Ga0126383_1133810713300010398Tropical Forest SoilILRRLTPLSGVQEDILQRLGLGTVLYRQLEIQAIGN*
Ga0137392_1093752423300011269Vadose Zone SoilRRLTPLSKLQEDILQRLGLGTSLYGQLEIQEIEN*
Ga0137391_1111755933300011270Vadose Zone SoilRRLTPLSRVQEAILQRLGLGTNLYRQLEIQNMES*
Ga0137391_1138583823300011270Vadose Zone SoilATGEEVLRRLTPLSGLQEDILQRLGLSASLYRQLEIQEIGN*
Ga0137425_103753723300011422SoilRRLTPLSGLQEDILQRLGLGAALYRQLEIQAIGH*
Ga0137388_1144485213300012189Vadose Zone SoilAGEEILRRLIPLSGLQEEILQRLGLGASLYGQLEIQEIGN*
Ga0137383_1013779713300012199Vadose Zone SoilRRLTPLSGLQEDILQRQGCGTALYRQLEMQNMSN*
Ga0137383_1131715523300012199Vadose Zone SoilRWLTPLSALQQAILYRLGLATSLYQQLERQNSGN*
Ga0137365_1008728053300012201Vadose Zone SoilGEEILRRLTPLSGLQKDILQRLGVGTNLYRQLEIQNMGS*
Ga0137365_1121195713300012201Vadose Zone SoilEDILRRLTPLSTLQQEILRRLGLGASLYRQLEIDDIGNG*
Ga0137374_1019178333300012204Vadose Zone SoilWRLTPLSALQEDILQRLGLGATLYGQLEIQAIGT*
Ga0137362_1026103623300012205Vadose Zone SoilAGEEILRRLTPLSRVQEAILQRLGLGTNLYRQLEIQNMES*
Ga0137380_1147578113300012206Vadose Zone SoilRRLTSLSRLQEDILQRLGLGVTLYAQLEIQAMGT*
Ga0137379_1023554033300012209Vadose Zone SoilRWLTPLSALQQEILHRLGLATSLYRQLEIQNGGN*
Ga0137379_1040673713300012209Vadose Zone SoilDILRRLTPLSGLQEDILQRLGLGATLYRQLEIQAIGT*
Ga0137379_1121193923300012209Vadose Zone SoilRRLTPLSAVQEDILQRLGLGAALYRQLEIQEMGN*
Ga0137378_1042314613300012210Vadose Zone SoilQRLTPLSALQQDILQRLGLGVSLYQQLEIQNMRG*
Ga0137378_1049467423300012210Vadose Zone SoilGEEILRRLTPLSGLQEDILQRQGLSTALYGQLEIQEIGN*
Ga0137378_1141868613300012210Vadose Zone SoilAAGDYMLWRLTPLSALQEDILQRLGLGATLYGQLEIQAIGT*
Ga0137378_1167038123300012210Vadose Zone SoilRRLTPLSGLQEDILQRLGLGATLYGQLEIQTIAI*
Ga0137377_1073813833300012211Vadose Zone SoilAAGEEILRRLTPLSGLQEELLQRQGLGTSLYRQLEIRDIGN*
Ga0137377_1089691523300012211Vadose Zone SoilRRLTPLSGLQKDILQRLGLGTNLYRQLEIQNMES*
Ga0137387_1007964213300012349Vadose Zone SoilAGEEILRRLTPLSGLQEDILQRQGCGTALYRQLEMQNMSN*
Ga0137385_1090819823300012359Vadose Zone SoilDILRRLTPLSGLQEDILQRLGLGAALYEQLEIQAIGH*
Ga0137385_1148644633300012359Vadose Zone SoilRRLTPLSGLQEDILQRQGFGTALYRQLEMQNMSN*
Ga0137385_1152542123300012359Vadose Zone SoilDILRRLTPLSGLQEDILQRLGLGAALYGQLEIQTIGN*
Ga0137360_1066365213300012361Vadose Zone SoilAAGEDMLRRLTPLTGLQEDILQRLGLGATLYGQLEIPAIGT*
Ga0137361_1047086523300012362Vadose Zone SoilATGEEMLRRLTPLSGVQEAILHRLELGTHLYRQLEI*
Ga0137361_1052644013300012362Vadose Zone SoilGEDILRRLTPLSTLQQEILRRLGLGASLYRQLEIHDIGNG*
Ga0137390_1095634113300012363Vadose Zone SoilILRRLTPLSRVQEAILQRLGLGTNLYRQLEIQNMEG*
Ga0137358_1101858013300012582Vadose Zone SoilVRRLTPLSACQEDILQRLGLGTALYGQLEIQNIEK*
Ga0137397_1128649513300012685Vadose Zone SoilILRRLTPLSGVQETILQCLGLDTSLYRQLEIQGIGN*
Ga0137395_1027150833300012917Vadose Zone SoilAAGEEILRRLTPLSKLQEEILQRLGLDTSLYGQLEIQEIEN*
Ga0137396_1002078013300012918Vadose Zone SoilEILRRLTPLSGLQEDILQRLGLGATLYAQLEIQAIGD*
Ga0137394_1079733623300012922Vadose Zone SoilRRLTPLTGLQEDILQRLGLGATLYGQLEIPAIGT*
Ga0137359_1013545133300012923Vadose Zone SoilGEEILRRLTPLSGVQEAILQRLGLGTNLYRQLEIQNIEK*
Ga0137404_10001899173300012929Vadose Zone SoilHRLTPLSGVQEDILQRLGVGATLDGQLEIQAIEA*
Ga0137404_1095510513300012929Vadose Zone SoilRRLTPLSGVQEAILQRLGLGTNLYRQLEIQNMKN*
Ga0126375_1115052023300012948Tropical Forest SoilAGEDILRRLTSLSRLQEDILQRLGLGATLYTQLEIQAMGT*
Ga0126369_1004604213300012971Tropical Forest SoilEDILRRLTPLSGVQEDILQRLGLGTALYGQLEIQTMGT*
Ga0126369_1055766333300012971Tropical Forest SoilAAGEDILRRLTPLSELQEDILQRLGLGVTLSRQLEMQTMEV*
Ga0126369_1360254523300012971Tropical Forest SoilRRLTPLSGLQEDILQRLGLGASLYEQLEIQEMGN*
Ga0163162_1265869613300013306Switchgrass RhizosphereRRITPLSGVQEAILQRLGLGTNLYRQLEIQNMGS*
Ga0134075_1043326813300014154Grasslands SoilAGEDILRRLTPLSGFQEDILQRLGLGATLYGQLEIQTIGI*
Ga0184637_1010438043300018063Groundwater SedimentRRLTPLSGLQEDILQRQGLGVSLYGQLAIQEIGNG
Ga0184618_1002283823300018071Groundwater SedimentMLRRLTPLTGLQEDILQRLGLGATLYGQLEIPAIGT
Ga0210378_1034243913300021073Groundwater SedimentGEEILRWLTPLAGLQEDIQRRLGLDTALYRQLEIHDIGN
Ga0179596_1025078123300021086Vadose Zone SoilLRRLTPLSGVQEDILQRLGLGTALYRQLEIQEMEN
Ga0187846_1036615423300021476BiofilmLRRLTSLSGLQKDILQRLGLGASLYGQLEIQEMGN
Ga0207684_1006076163300025910Corn, Switchgrass And Miscanthus RhizosphereANLWVKRQTPLSGLQEELLQRQGLGTSLYRQLEIRDIGN
Ga0207663_1153454623300025916Corn, Switchgrass And Miscanthus RhizosphereLRRLTPLSGVQEAILQRLGLGTNLYRQLEIQNMKS
Ga0207646_1007339213300025922Corn, Switchgrass And Miscanthus RhizosphereLRRLTPLSGLQEDILQRLGLGASLYRQLEIQEMGN
Ga0207712_1083342433300025961Switchgrass RhizosphereLRRLTPLSTLQQEVLRRLGLETSLYRQLEIHDMGN
Ga0209235_124437013300026296Grasslands SoilLRRLTPLSGLQEDILQRLGLGATLYGQLEIQTIAI
Ga0209239_105561033300026310Grasslands SoilLRRLTPLSGGQEAILQRLGLGANLYQQLEIQNIEK
Ga0209152_1050581613300026325SoilILRRLTPLSWLQEDILQRLGLGATLYRQLEIQAIGT
Ga0209158_133103723300026333SoilLRRLTPLSGLQEDILQRLGLGATFYGQLEIQAMST
Ga0257166_104136113300026358SoilMRRLTPLSAVQEAIVQRLGLGTNLYRQLEIQNMKN
Ga0209378_108658133300026528SoilAGGEEILRRITPLSGVQEAILQRLGLSTHLYRQLEIQNMGS
Ga0209157_138650913300026537SoilGEEILRRLTPLSAVQEDILQRLGLGAALYRQLEIQEMGN
Ga0209388_109434823300027655Vadose Zone SoilLRRLTPLTGLQEDILQRLGLGATLYGQLEIPAIGT
Ga0209388_118447423300027655Vadose Zone SoilLRRITPLSGVQEAILQRLGLGTHLYRQLEIQNMGS
Ga0209388_123230823300027655Vadose Zone SoilRRWLTPLSALQQAILYGLGLTPSLYQQLEMQNSGN
Ga0209077_115985333300027675Freshwater SedimentLRRLTPLSGVQEDILQRLGLGATLYGQLEIQAIEA
Ga0209283_1061721023300027875Vadose Zone SoilLRRLTPLSGVQEAILQRLGLGVSLYGQLEIHDSGN
Ga0209283_1063004023300027875Vadose Zone SoilLRRLTPRSALQEDILQRLGLGASLYRQLEIQEMGN
Ga0209283_1068695523300027875Vadose Zone SoilILRRLTPLSGLQEEILQRLGLGTSLYRQLEIQEIGN
Ga0209590_1005212213300027882Vadose Zone SoilLQRLTPLSTLPQDILQRLGLDPSLSQQLDMHDTGN
Ga0209590_1010685823300027882Vadose Zone SoilLRRLTPLSGLQEDILRRLGLSAALYEQLEIQAIGH
Ga0209590_1042117823300027882Vadose Zone SoilMRRLTPLSGLQEEILQRQGLGTSLYGQLEIQEIGN
Ga0209590_1054786023300027882Vadose Zone SoilLRRLTPLSELQEDILQRLGLGVTLYRQLEIQTIEV
Ga0209590_1060553823300027882Vadose Zone SoilLRRLTPLSGLQEDILQRLGLGAALYGQLEIQTIGN
Ga0209590_1072150713300027882Vadose Zone SoilLRRLTPLSGLQEDILQRQGLGPALYRQLEIQNMSN
Ga0209590_1078748713300027882Vadose Zone SoilLRRLTPLSELQKDILQRLGLDAALYEQLEIQTIGN
Ga0209590_1094683223300027882Vadose Zone SoilLRWLTPLSVLQEEILQRQGFGIALYRQLAIQHIRN
Ga0209382_1000719213300027909Populus RhizosphereLRRLTPLSGVQEDILQRLGLGAALYGQLEIPAIGT
Ga0209853_115350623300027961Groundwater SandHAAGEDILRRLTPLSGLQEDLLQRLGLGATLYGQLEIQTIGI
Ga0247828_1001995913300028587SoilLRRITPLSGVQEAILQRLGLGTNLYRQLEIQNMGS
Ga0307298_1002180113300028717SoilLRRLTPLSTLQQESLRRLGLGASLYRQLAIHDIGNG
Ga0307504_1016985313300028792SoilRRWLTPLSALQQAILSRLGLATALYQQLEIQNSGN
Ga0307302_1012720913300028814SoilLQRLTPLSTLQQAILQRLGLDMSLYQQLEIHYTGKGLGEW
Ga0307312_1113635113300028828SoilLRRLTPLSGLQEDILQRLGLGAALYRQLEIQAIGH
Ga0299907_1078294313300030006SoilLRRLTPLSGLQEDILQRLGLGASLYRQLEIQEIGN
Ga0268386_1101305513300030619SoilLRRLTPLSEVQQDILRRLGLGVSLYRQLEIQDIRNG
Ga0308200_106225423300030905SoilDILRRLTPLSGLQEEILQRLGLGATLYRQLEIQAIGT
Ga0308199_103437933300031094SoilAAGEEILRRLTPLSGLQEEILQRQGLGTSLYRQLEIRDIGN
Ga0310887_1003500413300031547SoilLRRLTPLSGLQEDILQRLGLGATLYMQLEIQAIGI
Ga0310915_1017964713300031573SoilLRRLTPLSGLQEDILQRLGLDAALYGQLEIQAIGH
Ga0306925_1116062823300031890SoilLRRLTSLSGLQEDILQRLGLGASLYGQLEIQEMGN
Ga0307406_1068794323300031901RhizosphereLRRLTPLSGLQEDILQRLGLGASLYGQLEIQEMGT
Ga0306921_1036139613300031912SoilVRRLTPLSALQEDILQRLGLGTSLYRQLEMQDIGQ
Ga0306922_1025309613300032001SoilLRRLTPLSGLQEDILQRLGLGAALYRQLEIQEMVN
Ga0307414_1167499513300032004RhizosphereDILRRLTPLSGVQETILQCLGLGTSLYRQLEIQGIGH
Ga0310890_1053342933300032075SoilSAAGEDILRRLTPLSGVQEDILQRLGLGTALYGQLEIQTMGT
Ga0307471_10211273123300032180Hardwood Forest SoilLRRLTPLSGLQEDILQRLGLGAVLYGQLEIQAIGH
Ga0307471_10305090613300032180Hardwood Forest SoilGEEILRRMTPLSGGQETILQRLGLGTQLYRQLAIQHMGS
Ga0306920_10390587913300032261SoilLRRITPLSGVQEAILQRLGLGTTLYRQLEIQNMGS
Ga0310914_1138802713300033289SoilMRRLTPLSALQQDILHRLGLGTALYRQLEMHNIGNG
Ga0310914_1146953613300033289SoilEILRRLTPLSGVQEDILQRLGLGTVLYRQLEIQAIGN
Ga0214472_1000029113300033407SoilLRQVTPLSAVQEEILKRLGLSLSLYRQLEIQETRN
Ga0214472_1005047663300033407SoilILRQVTPLSAVQEEILKRLGLSLSLYRQLEIQETRN
Ga0247829_1114592723300033550SoilATGEGILRRLTPLSGVQETILQCLGLGTSLYRQLETYISRE
Ga0247830_1061062013300033551SoilLRRLTPLSGLQEDILQRLGWGAALYGQLEIQGIGT
Ga0364931_0341247_3_1163300034176SedimentEIVRRLTPLSELQQDILRRLGLGTSLYRQLEIQDSGN


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