NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F044962

Metagenome Family F044962

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F044962
Family Type Metagenome
Number of Sequences 153
Average Sequence Length 79 residues
Representative Sequence MFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA
Number of Associated Samples 123
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 39.22 %
% of genes near scaffold ends (potentially truncated) 51.63 %
% of genes from short scaffolds (< 2000 bps) 77.12 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.346 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.725 % of family members)
Environment Ontology (ENVO) Unclassified
(32.026 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.131 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.36%    β-sheet: 27.27%    Coil/Unstructured: 46.36%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.198.3.1: YjbR-liked2a1va12a1v0.77771
d.198.3.1: YjbR-liked2fkia12fki0.67177
d.198.5.2: TfoX N-terminal domain-liked2od0a12od00.57943
d.198.2.1: Arp2/3 complex subunitsd1k8kf_1k8k0.56606
d.248.2.1: Ferredoxin-dependent bilin reductased3i94a_3i940.56235

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF01266DAO 39.87
PF01035DNA_binding_1 22.88
PF12833HTH_18 9.80
PF02870Methyltransf_1N 5.23
PF01804Penicil_amidase 3.92
PF02585PIG-L 1.96
PF13439Glyco_transf_4 1.96
PF00731AIRC 1.31
PF12681Glyoxalase_2 1.31
PF00903Glyoxalase 1.31
PF02222ATP-grasp 0.65
PF08811DUF1800 0.65
PF14224DUF4331 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 28.10
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 22.88
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 3.92
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 1.96
COG5267Uncharacterized conserved protein, DUF1800 familyFunction unknown [S] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.35 %
UnclassifiedrootN/A0.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725003|GPWSG_F5G3JLY01B0RFBAll Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105379472All Organisms → cellular organisms → Bacteria → Acidobacteria1163Open in IMG/M
3300000443|F12B_11700203All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300000550|F24TB_12314342All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300000574|JGI1357J11328_10186683All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300002128|JGI24036J26619_10081909All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300003319|soilL2_10095249All Organisms → cellular organisms → Bacteria4570Open in IMG/M
3300003324|soilH2_10013642All Organisms → cellular organisms → Bacteria9855Open in IMG/M
3300003324|soilH2_10162677All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300004019|Ga0055439_10019402All Organisms → cellular organisms → Bacteria1614Open in IMG/M
3300004058|Ga0055498_10055834All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300004114|Ga0062593_100027382All Organisms → cellular organisms → Bacteria3168Open in IMG/M
3300004114|Ga0062593_101717780All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300004114|Ga0062593_103212983All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300004267|Ga0066396_10019977All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300004480|Ga0062592_101559586All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300005175|Ga0066673_10744018All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300005186|Ga0066676_10325906All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300005289|Ga0065704_10710818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.557Open in IMG/M
3300005293|Ga0065715_10098416All Organisms → cellular organisms → Bacteria3528Open in IMG/M
3300005294|Ga0065705_10004912All Organisms → cellular organisms → Bacteria7782Open in IMG/M
3300005295|Ga0065707_10003963All Organisms → cellular organisms → Bacteria → Proteobacteria4111Open in IMG/M
3300005329|Ga0070683_101850946All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005330|Ga0070690_100590905All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300005330|Ga0070690_101404909All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005331|Ga0070670_100006412All Organisms → cellular organisms → Bacteria9958Open in IMG/M
3300005332|Ga0066388_100471004All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300005332|Ga0066388_100722877All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300005332|Ga0066388_101915992All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300005332|Ga0066388_108052863All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005333|Ga0070677_10054116All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300005334|Ga0068869_101352057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia629Open in IMG/M
3300005335|Ga0070666_10997041All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005336|Ga0070680_100291930All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300005338|Ga0068868_101786055All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005343|Ga0070687_100027649All Organisms → cellular organisms → Bacteria2743Open in IMG/M
3300005343|Ga0070687_100168613All Organisms → cellular organisms → Bacteria → Acidobacteria1301Open in IMG/M
3300005355|Ga0070671_100007002All Organisms → cellular organisms → Bacteria9034Open in IMG/M
3300005364|Ga0070673_101097773All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300005366|Ga0070659_100584877All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300005367|Ga0070667_100959811All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300005367|Ga0070667_101827853All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005406|Ga0070703_10614138All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300005438|Ga0070701_10119486All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300005440|Ga0070705_100777181All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005441|Ga0070700_100253453All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300005444|Ga0070694_100003293All Organisms → cellular organisms → Bacteria → Proteobacteria9658Open in IMG/M
3300005444|Ga0070694_101118580All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005444|Ga0070694_101175615All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300005456|Ga0070678_102019877All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300005466|Ga0070685_11147546All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005467|Ga0070706_100454548All Organisms → cellular organisms → Bacteria → Acidobacteria1192Open in IMG/M
3300005468|Ga0070707_100055682All Organisms → cellular organisms → Bacteria3792Open in IMG/M
3300005468|Ga0070707_101107592All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300005471|Ga0070698_101812811All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005518|Ga0070699_100009676All Organisms → cellular organisms → Bacteria → Proteobacteria8346Open in IMG/M
3300005526|Ga0073909_10626850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300005536|Ga0070697_101942658All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005544|Ga0070686_100332217All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300005545|Ga0070695_100129532All Organisms → cellular organisms → Bacteria → Acidobacteria1738Open in IMG/M
3300005546|Ga0070696_100008463All Organisms → cellular organisms → Bacteria6883Open in IMG/M
3300005546|Ga0070696_100036784All Organisms → cellular organisms → Bacteria3376Open in IMG/M
3300005549|Ga0070704_101516537All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005552|Ga0066701_10485280All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300005556|Ga0066707_10223710All Organisms → cellular organisms → Bacteria1221Open in IMG/M
3300005615|Ga0070702_100133353All Organisms → cellular organisms → Bacteria1572Open in IMG/M
3300005841|Ga0068863_100046046All Organisms → cellular organisms → Bacteria4139Open in IMG/M
3300006049|Ga0075417_10562162All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300006844|Ga0075428_100001298All Organisms → cellular organisms → Bacteria26510Open in IMG/M
3300006844|Ga0075428_100266017All Organisms → cellular organisms → Bacteria1846Open in IMG/M
3300006852|Ga0075433_10198792All Organisms → cellular organisms → Bacteria1782Open in IMG/M
3300006854|Ga0075425_100033622All Organisms → cellular organisms → Bacteria5703Open in IMG/M
3300006871|Ga0075434_100183666All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300006871|Ga0075434_100338251All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300006871|Ga0075434_102141723All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300006871|Ga0075434_102141725All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300006871|Ga0075434_102457948All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300006881|Ga0068865_101367783All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300006903|Ga0075426_11105740All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300007076|Ga0075435_100096712All Organisms → cellular organisms → Bacteria2443Open in IMG/M
3300009792|Ga0126374_10114174All Organisms → cellular organisms → Bacteria → Acidobacteria1564Open in IMG/M
3300010362|Ga0126377_10064358All Organisms → cellular organisms → Bacteria3240Open in IMG/M
3300010362|Ga0126377_10120436All Organisms → cellular organisms → Bacteria → Acidobacteria2424Open in IMG/M
3300010397|Ga0134124_11184536All Organisms → cellular organisms → Bacteria → Acidobacteria783Open in IMG/M
3300010397|Ga0134124_11271160Not Available758Open in IMG/M
3300010399|Ga0134127_11499576All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.747Open in IMG/M
3300012958|Ga0164299_10322830All Organisms → cellular organisms → Bacteria → Acidobacteria959Open in IMG/M
3300012971|Ga0126369_13573950All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300013306|Ga0163162_10130008All Organisms → cellular organisms → Bacteria2626Open in IMG/M
3300014875|Ga0180083_1033814All Organisms → cellular organisms → Bacteria → Acidobacteria1011Open in IMG/M
3300015371|Ga0132258_11480315All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1715Open in IMG/M
3300015371|Ga0132258_11955107All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300015371|Ga0132258_13390764All Organisms → cellular organisms → Bacteria → Acidobacteria1094Open in IMG/M
3300015372|Ga0132256_100184090All Organisms → cellular organisms → Bacteria → Acidobacteria2125Open in IMG/M
3300018061|Ga0184619_10454601All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.571Open in IMG/M
3300018476|Ga0190274_13814864All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300020005|Ga0193697_1004608All Organisms → cellular organisms → Bacteria3405Open in IMG/M
3300021080|Ga0210382_10213386All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.840Open in IMG/M
3300021445|Ga0182009_10003698All Organisms → cellular organisms → Bacteria4579Open in IMG/M
3300023071|Ga0247752_1031176All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300025558|Ga0210139_1012188All Organisms → cellular organisms → Bacteria → Acidobacteria1606Open in IMG/M
3300025893|Ga0207682_10040746All Organisms → cellular organisms → Bacteria → Acidobacteria1893Open in IMG/M
3300025901|Ga0207688_10177087All Organisms → cellular organisms → Bacteria → Proteobacteria1270Open in IMG/M
3300025903|Ga0207680_10922280All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300025921|Ga0207652_11001595All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.734Open in IMG/M
3300025922|Ga0207646_10048102All Organisms → cellular organisms → Bacteria3824Open in IMG/M
3300025922|Ga0207646_10125762All Organisms → cellular organisms → Bacteria2305Open in IMG/M
3300025922|Ga0207646_10792878All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300025923|Ga0207681_11488655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300025926|Ga0207659_10000815All Organisms → cellular organisms → Bacteria18445Open in IMG/M
3300025926|Ga0207659_10157137All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1782Open in IMG/M
3300025927|Ga0207687_11066938All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300025931|Ga0207644_10250681All Organisms → cellular organisms → Bacteria → Acidobacteria1412Open in IMG/M
3300025935|Ga0207709_10903947All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.718Open in IMG/M
3300025937|Ga0207669_10522955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria953Open in IMG/M
3300025944|Ga0207661_11905011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300025945|Ga0207679_10248705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1510Open in IMG/M
3300025960|Ga0207651_10136591All Organisms → cellular organisms → Bacteria → Acidobacteria1887Open in IMG/M
3300025960|Ga0207651_10459821All Organisms → cellular organisms → Bacteria → Acidobacteria1093Open in IMG/M
3300026023|Ga0207677_11273743All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.675Open in IMG/M
3300026067|Ga0207678_11173702All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300026088|Ga0207641_10061725All Organisms → cellular organisms → Bacteria3197Open in IMG/M
3300026089|Ga0207648_12087334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300026118|Ga0207675_100038281All Organisms → cellular organisms → Bacteria4475Open in IMG/M
3300026121|Ga0207683_10457352All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300026285|Ga0209438_1000348All Organisms → cellular organisms → Bacteria13814Open in IMG/M
3300027835|Ga0209515_10006938All Organisms → cellular organisms → Bacteria13859Open in IMG/M
3300027873|Ga0209814_10119203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1125Open in IMG/M
3300027873|Ga0209814_10478927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300027880|Ga0209481_10123503All Organisms → cellular organisms → Bacteria → Acidobacteria1264Open in IMG/M
3300027882|Ga0209590_10606106All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.704Open in IMG/M
3300028536|Ga0137415_10429809All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300028792|Ga0307504_10231247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300028799|Ga0307284_10113300All Organisms → cellular organisms → Bacteria → Acidobacteria1024Open in IMG/M
3300028828|Ga0307312_10660836All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
(restricted) 3300031197|Ga0255310_10039866All Organisms → cellular organisms → Bacteria → Acidobacteria1219Open in IMG/M
3300031716|Ga0310813_11031668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium751Open in IMG/M
3300031720|Ga0307469_10830399All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300031740|Ga0307468_100512887All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300031740|Ga0307468_100887358All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300031938|Ga0308175_102134873All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300031940|Ga0310901_10022013All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300031943|Ga0310885_10840026All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300032003|Ga0310897_10305376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300032012|Ga0310902_11161261All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300032174|Ga0307470_11099425All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.639Open in IMG/M
3300032180|Ga0307471_100014338All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis5505Open in IMG/M
3300032180|Ga0307471_100541579All Organisms → cellular organisms → Bacteria → Acidobacteria1317Open in IMG/M
3300032180|Ga0307471_101524688All Organisms → cellular organisms → Bacteria → Acidobacteria826Open in IMG/M
3300032205|Ga0307472_100521570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1030Open in IMG/M
3300033004|Ga0335084_11767269All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300033412|Ga0310810_10679596All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300033475|Ga0310811_10212105All Organisms → cellular organisms → Bacteria2346Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.23%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.61%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.96%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.31%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.65%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.65%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.65%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.65%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725003Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000574Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 mEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025558Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPWSG_021640602067725003SoilPYAGRKMFVCLIEDGLIVKLPEHFAREELRCGHATPFTRRGRPSKAWVKYVPRTTREAQGLAPVLELAARHVAETA
INPhiseqgaiiFebDRAFT_10537947223300000364SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELQRGHATPFTRRGRPSXAWIKYVPRTARDAYRLAPMLELAARHVAETA*
F12B_1170020313300000443SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATAFRRRGRPSKAWIKYVPRTARDAYRLAPVLELAARHVADGA*
F24TB_1231434223300000550SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATAFTRRGRPSKAWIKYVPRTARDAYRLAPVLELAARHVAETA*
JGI1357J11328_1018668313300000574GroundwaterPAGYAGRKLFVCLMEDGLVVKLPEHVAKDEVRSGKAALFIRQGRPSKAWVKYKPRTAREASRLAPILEVAARHVVQTA*
JGI24036J26619_1008190923300002128Corn, Switchgrass And Miscanthus RhizosphereHHRGLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
soilL2_1009524933300003319Sugarcane Root And Bulk SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRCGHATPFTRRGRPSKAWVKYVPRTTREAHRLAPVLELAARHVAEIA*
soilH2_1001364223300003324Sugarcane Root And Bulk SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEPLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDARRLAPVLELAARHVAETA*
soilH2_1016267723300003324Sugarcane Root And Bulk SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQFVREELRCGHATPFTRRGRPSKAWVKYVPRTTREAHRLAPVLELAARHVAEIA*
Ga0055439_1001940223300004019Natural And Restored WetlandsMFGLPAGYAGRKMFVCLIEDGLIVKLPEPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVTETA*
Ga0055498_1005583423300004058Natural And Restored WetlandsMFGLPAGYAGRKMFVCLIDDGFIVKLPPGVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG*
Ga0062593_10002738223300004114SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAHRLAPLLELAARHVAETA*
Ga0062593_10171778023300004114SoilMGRLFGRPAGYAGRRMFVCLMNDGFIVKLPLGIAKDEVRAGRASLFERRGRVSKAWIKYTPGTARQAGRLTPILELSAQHAAHA*
Ga0062593_10321298313300004114SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA*
Ga0066396_1001997713300004267Tropical Forest SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPAPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAP
Ga0062592_10155958613300004480SoilGLRRGRMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLELAARHVAETA*
Ga0066673_1074401813300005175SoilMFGLPAGYAGRKMFVCLIEEGLIVKLPERVAKDELRAGNAKVFVRRGRPSKKWIKYSPCNTREVGRLAPILEVAARYVVEAA*
Ga0066676_1032590623300005186SoilGRMFGLPAGYAGRKMFVCLIEEGLIVKLPERVAKDEVRAGNAKVFVRRGRPSKKWIKYSPRNTREAGRLAPILEVAARYVVEAA*
Ga0065704_1071081823300005289Switchgrass RhizosphereMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRL
Ga0065715_1009841643300005293Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0065705_1000491293300005294Switchgrass RhizosphereYAGRKMFVCLVEDGLIVKLPEQLAREELRRGKATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA*
Ga0065707_1000396323300005295Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEQLAREELRRGKATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA*
Ga0070683_10185094623300005329Corn RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLELAARHVAETA*
Ga0070690_10059090523300005330Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFTREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA*
Ga0070690_10140490913300005330Switchgrass RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPAVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVEEAA*
Ga0070670_10000641213300005331Switchgrass RhizosphereYAGRKMFVCLIEDGLIVKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAHRLAPLLELAARHVAETA*
Ga0066388_10047100423300005332Tropical Forest SoilMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRSARDAHRLAPVLELAARHVAETA*
Ga0066388_10072287723300005332Tropical Forest SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPAPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVAETA*
Ga0066388_10191599223300005332Tropical Forest SoilMFGLPAGYAGRRMFVCLIENGLIVKLPAPVAKEEIRRGHATAFTRRGRLSKTWIKYVPRTTREAYRLARVLELAARHVAETA*
Ga0066388_10805286313300005332Tropical Forest SoilAGRMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGKVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA*
Ga0070677_1005411623300005333Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA*
Ga0068869_10135205713300005334Miscanthus RhizosphereKMFVCLIEDGLIVKLPEHFAREELRCGHATPFTRRGRPSKAWVKYVPRTTREAQGLAPVLELAARHVAETA*
Ga0070666_1099704123300005335Switchgrass RhizosphereGLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070680_10029193013300005336Corn RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRL
Ga0068868_10178605513300005338Miscanthus RhizosphereRGLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070687_10002764913300005343Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHR
Ga0070687_10016861323300005343Switchgrass RhizosphereRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070671_10000700223300005355Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGRVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA*
Ga0070673_10109777323300005364Switchgrass RhizosphereYAGRKMFVCLVEDGLIVKLPETLAKEELRRGNAAPFIRRGKVSRSWIKYVPRTAREAQRLGPLLELAARHVAETA*
Ga0070659_10058487713300005366Corn RhizosphereGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLELAARHVAETA*
Ga0070667_10095981113300005367Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLELAARH
Ga0070667_10182785313300005367Switchgrass RhizosphereGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070703_1061413823300005406Corn, Switchgrass And Miscanthus RhizosphereLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070701_1011948623300005438Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLL
Ga0070705_10077718123300005440Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCVIEDGFIVKLPQRVAKDEVRGGKAVPFVRRGRPSRSWIKYTPHSAPDANRLAPILEIAARYVAEAA*
Ga0070700_10025345323300005441Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPAVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG*
Ga0070694_10000329333300005444Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCVIEDGFIVKLPQRVAKDEVRGGKAVPFVRRGRPSRSWIKYTPRSAPDANRLAPILEIAARYVAEAA*
Ga0070694_10111858023300005444Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPEPLAREELRRGKATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA*
Ga0070694_10117561523300005444Corn, Switchgrass And Miscanthus RhizosphereYAGRKMFVCLIEDGFIVKLPERLAREELRRGHATPFTRRGRPSKAWIKYVPRTVRDAHRLAPVLELAARHVAETA*
Ga0070678_10201987713300005456Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVP
Ga0070685_1114754623300005466Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRT
Ga0070706_10045454813300005467Corn, Switchgrass And Miscanthus RhizosphereLPAGYAGRKMFVCLIEDGFIVKLPPAVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAHW*
Ga0070707_10005568253300005468Corn, Switchgrass And Miscanthus RhizosphereAGRRMFVCLIEDGFIVKLPQSVAKDEVRAGKASPFVRRGRPSRLWIKYAPRTVGEAGRLAPILEMAARHVVEF*
Ga0070707_10110759223300005468Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCVIEDGFIVKLPQRVAKDEVRGGKAVPFVRRGRPSRSWIKYTPRSAPDANRLAPILEIAARYVVEAA*
Ga0070698_10181281113300005471Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRAGKAVPFVRRGRPSKLWIKYTPRTAHDAGRLAPILERAARHAAHW
Ga0070699_10000967683300005518Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRASRLWIKYTPRTAHDAGRLAPILERAARH
Ga0073909_1062685023300005526Surface SoilGLRAGRMFGLPAGYAGRKMFVCLIEEGFIVKLPEHVAKDEVRAGNAKVFVRRGRPSKKWIKYSPRNAREAGRLAPILEAAARYVVGV*
Ga0070697_10194265823300005536Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPESVAKDQVREGKAVPFVRRGRPSRAWIKYTPRTAPDANRLAPILEMAARHAAHW*
Ga0070686_10033221723300005544Switchgrass RhizosphereRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA*
Ga0070695_10012953213300005545Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG*
Ga0070696_10000846353300005546Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVAHW*
Ga0070696_10003678423300005546Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCVIEDGFIVKLPQRVAKDEVRGGKAVPFVRRGRPSRSWIKYTPRRAPDANRLAPILEIAARYVAEAA*
Ga0070704_10151653713300005549Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLEL
Ga0066701_1048528023300005552SoilGRRMFVCLIEEGFIVKLPERVAKNEVQAGKAKVFVRRGRPSKKWIKYSPRTAREAGRLAPILEVAARYVAEAA*
Ga0066707_1022371033300005556SoilMFGLPAGYAGRRMFVCLIEEGFIVKLPERVAKNEVQAGKAKVFVRRGRPSKKWIKYSPRTAREAGRLAPILEV
Ga0070702_10013335313300005615Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPV
Ga0068863_10004604643300005841Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGKVSKSWIKYVPRTAREAHRLAPLLEVAARHVAETA*
Ga0075417_1056216223300006049Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPQQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHAAETA
Ga0075428_100001298253300006844Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPERLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVAETT*
Ga0075428_10026601723300006844Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA*
Ga0075433_1019879223300006852Populus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAHW*
Ga0075425_10003362243300006854Populus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAH*
Ga0075434_10018366613300006871Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPERLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPV
Ga0075434_10033825123300006871Populus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEQLAKEELRRGNAAPFTRRGKVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA*
Ga0075434_10214172323300006871Populus RhizosphereRMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAHS*
Ga0075434_10214172523300006871Populus RhizosphereRMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAH*
Ga0075434_10245794823300006871Populus RhizosphereGLPAGYAGRRMFVCLIEDGFIVKLPPSVAKDELRAGKASPFVRRGRPSRLWVKYAPRTAREAARLAPILEMAARHVVSL*
Ga0068865_10136778313300006881Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLA
Ga0075426_1110574013300006903Populus RhizosphereAGRRMFVCLIEDGFIVKLPPSVAKDELRAGNASPFVRRGRPSRLWVKYAPRTAREAGRLAPILEMAVRHVVSL*
Ga0075435_10009671223300007076Populus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPASLAKEELRRGNAAPFTRRGKVSKSWIKYVPRTARDVQRLAPVLEFAARHVAETA*
Ga0126374_1011417433300009792Tropical Forest SoilYAGRRMFVCLIENGLIVKLPAPVAKEEIRRGHATAFTRRGRLSKTWIKYVPRTTREAYRLARVLELAARHVAETA*
Ga0126377_1006435823300010362Tropical Forest SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPAQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA*
Ga0126377_1012043643300010362Tropical Forest SoilGRKMFVCLIEDGLIVKLPAPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVAETA*
Ga0134124_1118453623300010397Terrestrial SoilFGLPAGYAGRKMFVCLIEDGFIVKLPERLAREELRRGHATPFTRRGRPSKAWIKYVPRTVRDAHRLAPVLELAARHVAETA*
Ga0134124_1127116023300010397Terrestrial SoilAGYAGRKMFVCLIEDGFIVKLPPAVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVEEAA*
Ga0134127_1149957623300010399Terrestrial SoilMFGLPAGYAGRKMFVCLIEDGFIVKLPERLAREELRRGHATPFTRRGRPSKAWIKYVPRTVRDAHRLAPVLELAARHVAETA*
Ga0164299_1032283013300012958SoilRMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGKVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA*
Ga0126369_1357395023300012971Tropical Forest SoilMFVCLIENGLIVKLPAPVAKEEIRRGHATAFTRRGRLSKAWIKYVPRTRREAYRLAPVLELAARHVAETA*
Ga0163162_1013000823300013306Switchgrass RhizosphereMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYSPRTTREAHRLAPLLELAARHVAETA*
Ga0180083_103381423300014875SoilGLPAGYAGRKLFVCLMEDGLIVKLPEHVAKDEVRSGKAAMFIRQGRPSKAWVKYKPRTAREASRLAPILEVAARHVVQTA*
Ga0132258_1148031523300015371Arabidopsis RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPPQFAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA*
Ga0132258_1195510723300015371Arabidopsis RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREADRLAPVLELAARHAAETA*
Ga0132258_1339076423300015371Arabidopsis RhizosphereLRMGRMFGLPAGYAGRKMFVCLIEDGLIVKLPLTLAKDQLRAGKAAAFVRRGRPSRSWIKATPRTA*
Ga0132256_10018409033300015372Arabidopsis RhizosphereYAGRKMFVCLVEDGLIVKLPEQLATEELRCGKATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA*
Ga0184619_1045460113300018061Groundwater SedimentMFGLPAGYAGRKLFVCLIEDGFIVKLPEQVAKDEVRSGKAAIFRRQGKPGTSWVKYKPRTAREAGRLAP
Ga0190274_1381486423300018476SoilLRLGRLFGLPAGFAGRRLFACLVEDQLIVKLPERLARDEVRSGKAAPYRRGKGPSKSWVAYAPRSASEAARLAPILEVAARHVVEAA
Ga0193697_100460833300020005SoilMFGLPAGYAGRKMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG
Ga0210382_1021338623300021080Groundwater SedimentMFGLPAGYAGRKLFVCLMEDGLIVKLPEQIAGTEVRTGKGVRESRIPYPGGVWVKYKPRTAREATRLAPILEVAARHVAEAA
Ga0182009_1000369823300021445SoilMFGLPAGYAGRKMFVCLVEDGLIVKLPETLAKEELRRGNAAPFIRRGKVSRSWIKYVPRTAREAQRLGPLLELAARHVAETA
Ga0247752_103117623300023071SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAHRLAPLLELAARHVAETA
Ga0210139_101218823300025558Natural And Restored WetlandsMFGLPAGYAGRKMFVCLIEDGLIVKLPEPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVTETA
Ga0207682_1004074623300025893Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA
Ga0207688_1017708723300025901Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA
Ga0207680_1092228023300025903Switchgrass RhizosphereGLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA
Ga0207652_1100159513300025921Corn RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPERLAREELRRGHATPFTRRGRPSKAWIKYVPRTVRDAHRLAPVLELAARHVAETA
Ga0207646_1004810213300025922Corn, Switchgrass And Miscanthus RhizosphereRRMFVCLIEDGFIVKLPQSVAKDEVRAGKASPFVRRGRPSRLWIKYAPRTVGEAGRLAPILEMAARHVVEF
Ga0207646_1012576223300025922Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHAAHW
Ga0207646_1079287823300025922Corn, Switchgrass And Miscanthus RhizosphereMFGLPAGYAGRRMFVCVIEDGFIVKLPQRVAKDEVRGGKAVPFVRRGRPSRSWIKYTPRSAPDANRLAPILEIAARYVVEAA
Ga0207681_1148865523300025923Switchgrass RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPAVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG
Ga0207659_1000081573300025926Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAQFAREELRRGNATPFTRRGRPSKAWIKYVPRTPRDAHRLAPVLELAARHVAETA
Ga0207659_1015713733300025926Miscanthus RhizosphereLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA
Ga0207687_1106693823300025927Miscanthus RhizosphereLIEDGLIMKLPQQLAREELRRGNATPFTRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA
Ga0207644_1025068123300025931Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGRVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA
Ga0207709_1090394713300025935Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVQG
Ga0207669_1052295533300025937Miscanthus RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPAPLAKEEVRRGNAAPFTRRGKVSKSWIKYVPRTAREAQRLA
Ga0207661_1190501123300025944Corn RhizosphereMGRLFGRPAGYAGRRMFVCLMNDGFIVKLPLGIAKDEVRAGRASLFERRGRVSKAWIKYTPGTARQAGRLTPILELS
Ga0207679_1024870523300025945Corn RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA
Ga0207651_1013659123300025960Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGKVSKGWIKYVPRTAREAHRLAPLLEVAARHVAETA
Ga0207651_1045982113300025960Switchgrass RhizosphereRGLRQGRMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAHRLAPLLELAARHVAETA
Ga0207677_1127374323300026023Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAH
Ga0207678_1117370213300026067Corn RhizosphereKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA
Ga0207641_1006172533300026088Switchgrass RhizosphereMFGLPAGYAGRKMFVCLVEDGLIVKLPEPLAKEELRRGNAAPFTRRGKVSKSWIKYVPRTAREAHRLAPLLEVAARHVAETA
Ga0207648_1208733423300026089Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPI
Ga0207675_10003828113300026118Switchgrass RhizosphereAGRKMFVCLIEDGLIVKLPQQLAREELRRGSATPFARRGRPSRAWIKYVPRTAREAHRLAPLLELAARHVAETA
Ga0207683_1045735223300026121Miscanthus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA
Ga0209438_1000348103300026285Grasslands SoilMFGLPAGYAGRRMFVCLIEDGLIVKLPPAVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLEPILERAARHVVEAA
Ga0209515_1000693853300027835GroundwaterMFGLPAGYAGRRLFVYVMEDGLIVKLPEDVAKDEVRNGKAAMFRRQGKPGKSWVKYRPRTAREASRLAPILEVAARHVVEAA
Ga0209814_1011920323300027873Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPERLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVAETT
Ga0209814_1047892713300027873Populus RhizosphereMFGLPAGYAGRRMFVCLIEDGFIVKLPPGVAKDELRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERARATIAQFDLDRSE
Ga0209481_1012350323300027880Populus RhizosphereMFGLPAGYAGRKMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA
Ga0209590_1060610613300027882Vadose Zone SoilMFGLPAGYAGRRMFVCLIEGGFIVKLPPGVARDELRAGKAVPFVRRGRPSRLWIKYTPRTAPDANRLAPIL
Ga0137415_1042980923300028536Vadose Zone SoilMFGLPAGYAGRRMFVCLIEDGLIVKLPSAVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLEPIL
Ga0307504_1023124713300028792SoilGLRIGRMFGLPAGYAGRRMFVCLIEDGLIVKLPPAVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLEPILERAARHVVEAA
Ga0307284_1011330023300028799SoilRVGRMFGLPAGYAGRKMFVCLIEEGFIVKLPERVAKDEVRAGNARVFVRRGRPSKKWIKYSPRNAREAGRLAPILEAAARYVAEAA
Ga0307312_1066083613300028828SoilRMFGLPAGYAGRKMFVCLIEEGFIVKLPERVAKDEVRAGNARVFVRRGRPSKKWIKYSPRNAREAGRLAPILEAAARYVAEAA
(restricted) Ga0255310_1003986613300031197Sandy SoilAGYAGRKMFVCLIEEGFIVKLPERIAKDEVRAGNAKVFVRRGRPSKKWIKYSPRNAREAGRLAPILEAAARYVVGV
Ga0310813_1103166823300031716SoilMGRLFGRPAGYAGRRMFVCLMNDGFIVKLPLGIAKDEVRAGRASLFERRGRVSKAWIKYTPGTARQAGRLTPILELSAQHAAHA
Ga0307469_1083039923300031720Hardwood Forest SoilGRMFGLPAGYAGRKMFVCLIEDGFIVKLPPGVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHEAGRLAPILERAARHVVQG
Ga0307468_10051288723300031740Hardwood Forest SoilMFGRPAGYAGRRMFVCLIEDGLIVKLPERLAKEEVRGGRAAEFTRGGRPSKSWIKYTPRSTRDAGRLAPILEVAARYVAEAA
Ga0307468_10088735823300031740Hardwood Forest SoilMFGLPAGYAGRKMFVCLIEDGLIVKLPEPLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAYRLAPVLELAARHVAETA
Ga0308175_10213487323300031938SoilMGRLFGRPAGYAGRRMFVCLMDDGLIVKLPHGIASDEVRAGRASVVERRGRVSRNWIKYAPGTTRQAGRLTPILELAAHYAVRA
Ga0310901_1002201323300031940SoilMFGLPAGYAGRKMFVCLIEDGLIMKLPQQLAREELRRGNATPFIRRGRPSKAWIKYIPRTTREAHRLAPLLELAARHVAETA
Ga0310885_1084002623300031943SoilRKLFVCLMEDGLIVKLPEHVAKDEVRSGKAALFIRQGRPSRAWVKYKPRTAREASRLAPILEVAARHVVQTA
Ga0310897_1030537623300032003SoilMFGLPAGYAGRKLFVCLMEDGLIVKLPEHVAKDEVRSGKAALFIRQGRPSRAWVKYKPRTAREASRLAPILEVAARHVVQTA
Ga0310902_1116126113300032012SoilGRMFGLPAGYAGRKLFVCLMEDGLIVKLPEHVAKDEVRSGKAALFIRQGRPSRAWVKYKPRTAREASRLAPILEVAARHVVQTA
Ga0307470_1109942513300032174Hardwood Forest SoilMFGLPAGYAGRKMFVCLIEDGFIVKLPPGVAKDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLA
Ga0307471_10001433833300032180Hardwood Forest SoilMFGLPAGYAGRRMFVCLIEDGLIVKLPPGVAKDELRAGKAAPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVEAA
Ga0307471_10054157923300032180Hardwood Forest SoilHRGLRIGRMFGLPAGYAGRRMFVCLIEDGFIVKLPQSLARDELRAGKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVEAA
Ga0307471_10152468813300032180Hardwood Forest SoilGYAGRKMFVCLIDDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTAREAHRLAPVLELAARHVAETA
Ga0307472_10052157023300032205Hardwood Forest SoilMFGLPAGYAGRKMFVCLIEDGFIVKLPPDVAKDQLRARKAVPFVRRGRPSRLWIKYTPRTAHDAGRLAPILERAARHVVEAA
Ga0335084_1176726913300033004SoilHHRGLRMGRMFGRPAGYAGRKMFVCLMDDGLIVKLPERVAKDEVRDGNASVFTMRGRASKAWIKYSPRSAREAGRLAPILEVAARYVAEVA
Ga0310810_1067959623300033412SoilMFVCLIEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPVLELAARHVAETA
Ga0310811_1021210513300033475SoilMFGLPAGYAGRKMFVCLVEDGLIVKLPEQLAREELRRGNATPFTRRGRPSKAWIKYVPRTARDAHRLAPV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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