Metagenome / Metatranscriptome Family F044879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044879
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	61 residues
Representative Sequence	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Number of Associated Samples	102
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.42 %
% of genes near scaffold ends (potentially truncated)	56.21 %
% of genes from short scaffolds (< 2000 bps)	96.73 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.007 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (71.895 % of family members)
Environment Ontology (ENVO)	Unclassified (88.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (72.549 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.11% β-sheet: 0.00% Coil/Unstructured: 48.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF03108	DBD_Tnp_Mut	0.65
PF00931	NB-ARC	0.65
PF14223	Retrotran_gag_2	0.65
PF00665	rve	0.65
PF00078	RVT_1	0.65
PF13966	zf-RVT	0.65
PF07727	RVT_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.65
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.65
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.65
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
All Organisms	root	All Organisms	16.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
cellular organisms	root	All Organisms → cellular organisms	16.34 %
Viruses	superkingdom	All Organisms → Viruses	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	16.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	16.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	16.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	16.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	16.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	15.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	13.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	13.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	11.11 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	11.11 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	11.11 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	11.11 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	9.80 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	0.65 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.01 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	9.80 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	0.65 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005335\|Ga0070666_10527503	Not Available	857	Open in IMG/M
3300005353\|Ga0070669_100389152	Not Available	1138	Open in IMG/M
3300005355\|Ga0070671_101971734	Not Available	520	Open in IMG/M
3300005365\|Ga0070688_100806382	Not Available	734	Open in IMG/M
3300005365\|Ga0070688_101191981	Not Available	611	Open in IMG/M
3300005441\|Ga0070700_101345725	Not Available	602	Open in IMG/M
3300005467\|Ga0070706_101406212	Not Available	638	Open in IMG/M
3300005544\|Ga0070686_101616074	Not Available	549	Open in IMG/M
3300005618\|Ga0068864_101186802	Not Available	761	Open in IMG/M
3300005719\|Ga0068861_101565092	Not Available	648	Open in IMG/M
3300005842\|Ga0068858_101033926	Not Available	805	Open in IMG/M
3300005843\|Ga0068860_102206836	Not Available	571	Open in IMG/M
3300005843\|Ga0068860_102833273	Not Available	502	Open in IMG/M
3300005844\|Ga0068862_102242815	Not Available	557	Open in IMG/M
3300009101\|Ga0105247_10718906	Not Available	754	Open in IMG/M
3300009553\|Ga0105249_11726762	Not Available	698	Open in IMG/M
3300009872\|Ga0130079_14275155	Not Available	703	Open in IMG/M
3300009975\|Ga0105129_116953	Not Available	545	Open in IMG/M
3300009980\|Ga0105135_119012	Not Available	594	Open in IMG/M
3300009981\|Ga0105133_101068	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300009989\|Ga0105131_105383	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	973	Open in IMG/M
3300009989\|Ga0105131_131920	Not Available	565	Open in IMG/M
3300009990\|Ga0105132_130693	Not Available	575	Open in IMG/M
3300009990\|Ga0105132_132149	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	567	Open in IMG/M
3300009990\|Ga0105132_132905	Not Available	562	Open in IMG/M
3300009992\|Ga0105120_1024812	Not Available	682	Open in IMG/M
3300009994\|Ga0105126_1006910	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1001	Open in IMG/M
3300009994\|Ga0105126_1014680	Not Available	794	Open in IMG/M
3300009995\|Ga0105139_1114261	Not Available	523	Open in IMG/M
3300015270\|Ga0182183_1001978	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1445	Open in IMG/M
3300015270\|Ga0182183_1045119	Not Available	638	Open in IMG/M
3300015273\|Ga0182102_1003739	Not Available	955	Open in IMG/M
3300015280\|Ga0182100_1045899	Not Available	657	Open in IMG/M
3300015280\|Ga0182100_1048364	Not Available	646	Open in IMG/M
3300015290\|Ga0182105_1065928	Not Available	601	Open in IMG/M
3300015290\|Ga0182105_1078354	Not Available	566	Open in IMG/M
3300015293\|Ga0182103_1028457	Not Available	756	Open in IMG/M
3300015297\|Ga0182104_1114316	Not Available	512	Open in IMG/M
3300015300\|Ga0182108_1005555	Not Available	1181	Open in IMG/M
3300015306\|Ga0182180_1041320	Not Available	677	Open in IMG/M
3300015310\|Ga0182162_1119932	Not Available	518	Open in IMG/M
3300015313\|Ga0182164_1020808	Not Available	972	Open in IMG/M
3300015315\|Ga0182120_1014980	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1085	Open in IMG/M
3300015315\|Ga0182120_1088264	Not Available	601	Open in IMG/M
3300015317\|Ga0182136_1044707	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	768	Open in IMG/M
3300015317\|Ga0182136_1094408	Not Available	589	Open in IMG/M
3300015319\|Ga0182130_1042048	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	764	Open in IMG/M
3300015319\|Ga0182130_1103117	Not Available	561	Open in IMG/M
3300015320\|Ga0182165_1087132	Not Available	619	Open in IMG/M
3300015324\|Ga0182134_1004291	Not Available	1535	Open in IMG/M
3300015324\|Ga0182134_1024152	Not Available	956	Open in IMG/M
3300015324\|Ga0182134_1053265	Not Available	740	Open in IMG/M
3300015324\|Ga0182134_1054551	Not Available	733	Open in IMG/M
3300015325\|Ga0182148_1102582	Not Available	577	Open in IMG/M
3300015326\|Ga0182166_1017910	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1015	Open in IMG/M
3300015326\|Ga0182166_1051483	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	735	Open in IMG/M
3300015326\|Ga0182166_1100968	Not Available	579	Open in IMG/M
3300015327\|Ga0182114_1049639	Not Available	799	Open in IMG/M
3300015327\|Ga0182114_1058783	Not Available	751	Open in IMG/M
3300015327\|Ga0182114_1104071	Not Available	605	Open in IMG/M
3300015328\|Ga0182153_1052666	Not Available	748	Open in IMG/M
3300015328\|Ga0182153_1114222	Not Available	565	Open in IMG/M
3300015328\|Ga0182153_1127165	Not Available	542	Open in IMG/M
3300015328\|Ga0182153_1143616	Not Available	516	Open in IMG/M
3300015329\|Ga0182135_1076414	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	663	Open in IMG/M
3300015330\|Ga0182152_1018883	Not Available	1058	Open in IMG/M
3300015331\|Ga0182131_1043480	Not Available	814	Open in IMG/M
3300015331\|Ga0182131_1054501	Not Available	753	Open in IMG/M
3300015332\|Ga0182117_1019164	Not Available	1136	Open in IMG/M
3300015332\|Ga0182117_1070950	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	723	Open in IMG/M
3300015332\|Ga0182117_1097974	Not Available	636	Open in IMG/M
3300015333\|Ga0182147_1070352	Not Available	716	Open in IMG/M
3300015333\|Ga0182147_1108089	Not Available	606	Open in IMG/M
3300015333\|Ga0182147_1128761	Not Available	565	Open in IMG/M
3300015333\|Ga0182147_1158760	Not Available	517	Open in IMG/M
3300015334\|Ga0182132_1030949	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	957	Open in IMG/M
3300015334\|Ga0182132_1082895	Not Available	675	Open in IMG/M
3300015334\|Ga0182132_1115676	Not Available	591	Open in IMG/M
3300015335\|Ga0182116_1070622	Not Available	743	Open in IMG/M
3300015337\|Ga0182151_1019852	Not Available	1071	Open in IMG/M
3300015337\|Ga0182151_1131951	Not Available	554	Open in IMG/M
3300015338\|Ga0182137_1056158	Not Available	809	Open in IMG/M
3300015338\|Ga0182137_1073794	Not Available	730	Open in IMG/M
3300015338\|Ga0182137_1113382	Not Available	614	Open in IMG/M
3300015339\|Ga0182149_1024343	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1047	Open in IMG/M
3300015339\|Ga0182149_1128339	Not Available	572	Open in IMG/M
3300015340\|Ga0182133_1121383	Not Available	614	Open in IMG/M
3300015348\|Ga0182115_1136846	Not Available	782	Open in IMG/M
3300015348\|Ga0182115_1234363	Not Available	585	Open in IMG/M
3300015348\|Ga0182115_1286299	Not Available	521	Open in IMG/M
3300015349\|Ga0182185_1040279	Not Available	1188	Open in IMG/M
3300015349\|Ga0182185_1118191	Not Available	773	Open in IMG/M
3300015349\|Ga0182185_1125246	Not Available	753	Open in IMG/M
3300015350\|Ga0182163_1099650	Not Available	880	Open in IMG/M
3300015350\|Ga0182163_1263325	Not Available	540	Open in IMG/M
3300015352\|Ga0182169_1126853	Not Available	827	Open in IMG/M
3300015352\|Ga0182169_1136091	Not Available	798	Open in IMG/M
3300015352\|Ga0182169_1179968	Not Available	691	Open in IMG/M
3300015352\|Ga0182169_1259985	Not Available	563	Open in IMG/M
3300015354\|Ga0182167_1235163	Not Available	664	Open in IMG/M
3300015354\|Ga0182167_1249628	Not Available	640	Open in IMG/M
3300015354\|Ga0182167_1263010	Not Available	620	Open in IMG/M
3300015354\|Ga0182167_1289307	Not Available	584	Open in IMG/M
3300017408\|Ga0182197_1041046	Not Available	825	Open in IMG/M
3300017408\|Ga0182197_1051157	Not Available	760	Open in IMG/M
3300017414\|Ga0182195_1044069	Not Available	925	Open in IMG/M
3300017414\|Ga0182195_1157952	Not Available	578	Open in IMG/M
3300017421\|Ga0182213_1192669	Not Available	579	Open in IMG/M
3300017432\|Ga0182196_1050322	Not Available	743	Open in IMG/M
3300017439\|Ga0182200_1071671	Not Available	672	Open in IMG/M
3300017440\|Ga0182214_1086920	Not Available	657	Open in IMG/M
3300017445\|Ga0182198_1197884	Not Available	508	Open in IMG/M
3300017447\|Ga0182215_1074621	Not Available	739	Open in IMG/M
3300017447\|Ga0182215_1082211	Not Available	707	Open in IMG/M
3300017691\|Ga0182212_1113056	Not Available	612	Open in IMG/M
3300017693\|Ga0182216_1144726	Not Available	600	Open in IMG/M
3300017694\|Ga0182211_1085184	Not Available	735	Open in IMG/M
3300017694\|Ga0182211_1106909	Not Available	656	Open in IMG/M
3300026088\|Ga0207641_11983121	Not Available	583	Open in IMG/M
3300028050\|Ga0268328_1054183	Not Available	559	Open in IMG/M
3300028054\|Ga0268306_1021716	Not Available	590	Open in IMG/M
3300028056\|Ga0268330_1007829	Not Available	1002	Open in IMG/M
3300028058\|Ga0268332_1044932	Not Available	621	Open in IMG/M
3300028064\|Ga0268340_1008688	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1064	Open in IMG/M
3300028151\|Ga0268308_1032827	Not Available	508	Open in IMG/M
3300028256\|Ga0268304_1004846	Not Available	723	Open in IMG/M
3300028262\|Ga0268310_1002121	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1365	Open in IMG/M
3300028471\|Ga0268323_1009311	Not Available	649	Open in IMG/M
3300028472\|Ga0268315_1020769	Not Available	551	Open in IMG/M
3300030772\|Ga0061013_12738755	Not Available	624	Open in IMG/M
3300031118\|Ga0061019_14275155	Not Available	703	Open in IMG/M
3300032466\|Ga0214503_1018580	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1847	Open in IMG/M
3300032467\|Ga0214488_1000697	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3627	Open in IMG/M
3300032467\|Ga0214488_1017953	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1414	Open in IMG/M
3300032514\|Ga0214502_1022226	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	2078	Open in IMG/M
3300032589\|Ga0214500_1002688	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3242	Open in IMG/M
3300032590\|Ga0214489_1014729	Not Available	1116	Open in IMG/M
3300032592\|Ga0214504_1021872	Not Available	1211	Open in IMG/M
3300032698\|Ga0214485_1005360	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	1878	Open in IMG/M
3300032699\|Ga0214494_1053450	Not Available	777	Open in IMG/M
3300032699\|Ga0214494_1054749	Not Available	767	Open in IMG/M
3300032812\|Ga0314745_1013326	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1580	Open in IMG/M
3300032823\|Ga0314723_1025275	Not Available	1101	Open in IMG/M
3300032824\|Ga0314735_1078495	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	619	Open in IMG/M
3300032844\|Ga0314743_1003769	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	2613	Open in IMG/M
3300032913\|Ga0314739_1041798	Not Available	864	Open in IMG/M
3300032914\|Ga0314750_1141680	Not Available	560	Open in IMG/M
3300032915\|Ga0314749_1105245	Not Available	605	Open in IMG/M
3300032916\|Ga0314734_1089862	Not Available	610	Open in IMG/M
3300032934\|Ga0314741_1145477	Not Available	531	Open in IMG/M
3300032953\|Ga0314729_100255	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2857	Open in IMG/M
3300033530\|Ga0314760_1099275	Not Available	719	Open in IMG/M
3300033534\|Ga0314757_1166086	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.73%
Environmental	Environmental	3.27%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	94.77%
Terrestrial	Environmental → Terrestrial	3.27%
Mammals	Host-Associated → Mammals	1.96%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	79.09%
Unclassified	Host-Associated → Plants → Unclassified	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Soil	Environmental → Terrestrial → Soil	3.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.27%
Digestive System	Host-Associated → Mammals → Digestive System	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	79.09%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	7.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.58%
Loam	Environmental → Terrestrial → Soil → Loam	3.27%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.31%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	79.09%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	7.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.31%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	0.65%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	71.90%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	7.84%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	6.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.31%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	0.65%
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009872	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Switchgrass. Combined Assembly of Gp0148675, Gp0148676	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017691	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300030772	Coassembly of Cow X Switchgrass	Host-Associated	Open in IMG/M
3300031118	Coassembly of Cow X and Y Switchgrass	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032514	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032589	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032590	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_31MAY2016_LR3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032592	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032698	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032812	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032823	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032824	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032844	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032913	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032914	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032915	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032916	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032934	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032953	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_05JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033530	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033534	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070666_105275032	3300005335	Switchgrass Rhizosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0070669_1003891522	3300005353	Switchgrass Rhizosphere	VTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSFQVYNKTKDLSNSKCRKFEKYT*
Ga0070671_1019717341	3300005355	Switchgrass Rhizosphere	MTTIIVTNEFVQLNEILSLIWSYVKEALQFHYSKRRSPYSTQVCNKTKDLSSPKCHKVEKDT*
Ga0070688_1008063822	3300005365	Switchgrass Rhizosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSRYSTQVYNKTKDLSSSKCRKVEKDT*
Ga0070688_1011919811	3300005365	Switchgrass Rhizosphere	MTTIIVTNEFVQLNETLLLIWSYVKEAPQFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT*
Ga0070700_1013457252	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTIIIVTNEFVQFNEILSLIGSYVNEAPKFLYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT*
Ga0070706_1014062123	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0070686_1016160741	3300005544	Switchgrass Rhizosphere	KHLGPQGMFRLMTTIIVTNEFVQLNKILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKCRKVEKDT
Ga0068864_1011868021	3300005618	Switchgrass Rhizosphere	VQLNETLSLIWSYVKEAPQFHYSKRRSRYSTQIYIKTKDLSSPKCRKVEKDT*
Ga0068861_1015650921	3300005719	Switchgrass Rhizosphere	IIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSWYSTQVYNKTKDLSSPKCCKVEKDT*
Ga0068858_1010339262	3300005842	Switchgrass Rhizosphere	MTTIIVTNKFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0068860_1022068362	3300005843	Switchgrass Rhizosphere	MTTIIVTNEFVQLNETLSLIWSYVKEAPEFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT*
Ga0068860_1028332732	3300005843	Switchgrass Rhizosphere	MFRLMTAIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0068862_1022428152	3300005844	Switchgrass Rhizosphere	MFRLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0105247_107189061	3300009101	Switchgrass Rhizosphere	VQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0105249_117267621	3300009553	Switchgrass Rhizosphere	MFRLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0130079_142751551	3300009872	Rumen	VCVVINHQKGGDCKHLGPQGMFRRLVITIIVTNEFVQLNEILSHIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0105129_1169531	3300009975	Switchgrass Associated	IIVTNEFVQLNEILSLIGSYVKEAPQFRRSRYSTQVYNKTKYLSSPKCRKVEKDT*
Ga0105135_1190121	3300009980	Switchgrass Associated	EFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0105133_1010681	3300009981	Switchgrass Associated	MTTIIVTNEFVQLNEILSLIGSYAKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKYRKVEKDT*
Ga0105131_1053832	3300009989	Switchgrass Associated	MTTIIVTNEFVQLNELLSLIGSCVKEAPKFHYSKWRSRYSTQVYNKTKDLSSPKCRK
Ga0105131_1319201	3300009989	Switchgrass Associated	MTTIIVTNEFVQLNEMLSLIWSYVKRGPSNFGYSKRRSRYSTKDYVKTKDLSSPKCHKAEKDT*
Ga0105132_1306931	3300009990	Switchgrass Associated	TIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDI
Ga0105132_1321491	3300009990	Switchgrass Associated	MTIIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKCHKVEKDT*
Ga0105132_1329051	3300009990	Switchgrass Associated	MTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRYRYSTQVYNKTKDLSSPKCRKVEKDTYVSIG
Ga0105120_10248121	3300009992	Switchgrass Associated	TNEFVQLNEILSLIGSYVKDAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0105126_10069101	3300009994	Switchgrass Associated	MTTIIMTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSRYSTQVYNKTLDLSSPKCRKVEKDT*
Ga0105126_10146802	3300009994	Switchgrass Associated	MFRLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCPKVEKYT
Ga0105139_11142611	3300009995	Switchgrass Associated	MTIIIVTNEFVHLNEILSLIGSYVKDAPKFHYSKMRSWYSTQVYNKTKDLSSLKCRKVE
Ga0182183_10019784	3300015270	Switchgrass Phyllosphere	MTTIIVINEFVQLNETLSLIWSYVKEAPKFHYSKRRSRYSTQIYIKTKDL
Ga0182183_10451191	3300015270	Switchgrass Phyllosphere	MTIIIVTNEFVQLNESLLLIWSYVKEAPKFHYSKRRFRYSTQIYIKTKDLSSPKCRKVEKDT*
Ga0182102_10037392	3300015273	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182100_10458992	3300015280	Switchgrass Phyllosphere	MTTIIVTNEFVQLNETLSLIRSYVKEAPQFHYSKRRSRYSTQACNKTKDLSSPKCRKVEK
Ga0182100_10483641	3300015280	Switchgrass Phyllosphere	MTNIIVTNEIIQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQLYVKTKDLSSPKYQKIEKDTWVSIGFIVL*
Ga0182105_10659281	3300015290	Switchgrass Phyllosphere	MTTITVTNEFVQLNDILSLIGSYVKEAPQFHYSKRRSPYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182105_10783541	3300015290	Switchgrass Phyllosphere	MTIIIVTNEFVQLNEILSIIGSYVKEAPKFHYSKRRSRYSFQVYNKTKDLCSPKCHKVEKDT*
Ga0182103_10284571	3300015293	Switchgrass Phyllosphere	LMTTIIVTNEFVQLNEILSLIGSYVKEALKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182104_11143161	3300015297	Switchgrass Phyllosphere	MFRLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKMRSWYSTQVYNKTKDLSSPKCRKVEKDT
Ga0182108_10055551	3300015300	Miscanthus Phyllosphere	KHLGPQGMFRLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSRYSTQVYNKTKDLSSPKCHKVEKDT
Ga0182180_10413201	3300015306	Switchgrass Phyllosphere	RPNIVTNEFVQLNELLSFIGSYIKEAPKFRYSKRRSRYSTQIYNKTKYLSSPKCHKVEKDT*
Ga0182162_11199321	3300015310	Switchgrass Phyllosphere	MTTIIVTNEIVQLNEILLLIWSYVKEALQFHYSKRRSPYSTQVCNKTKDLSSPKCRKVEKDT*
Ga0182164_10208081	3300015313	Switchgrass Phyllosphere	MTIIIVTNEFVQLNESLSLIGSYVKEAPKFHHSKKRSWYSTQVYNKTKDLSSPKC
Ga0182120_10149801	3300015315	Switchgrass Phyllosphere	MTIIIVNNEFVQLNEIFLLIWSYIKEAPKFHDSKRRFWYSTQVCNKTKDLS
Ga0182120_10882641	3300015315	Switchgrass Phyllosphere	MTTIIVTNKFVQFNEILSLIGSYVKDAPKFHYSKRSRYSTQVYNKTKDLSSPKCYKVEKDT
Ga0182136_10447071	3300015317	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEDPKFHYSKRRSRYSTQVYNKTKDLSSPKCR
Ga0182136_10944081	3300015317	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLS
Ga0182130_10420481	3300015319	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSHVKEAPKFHYSKRRSRYSFQVYNKTKDLSSPKCRKVEKDT
Ga0182130_11031172	3300015319	Switchgrass Phyllosphere	MTTITVTNEFVQLNDILSLIGSYVKEAPQFHYSKRRSWYSTQVYNKTKDLSSP
Ga0182165_10871321	3300015320	Switchgrass Phyllosphere	MTIIIVTNEFVQLNEILSLIGSYIKEASKFHYSKSQSRYSTQVCNKTKDLSNPKCHKVEKDI*
Ga0182134_10042912	3300015324	Switchgrass Phyllosphere	MFRLMTTIIVTNEFVQLNETLSLIWSYVKEAPQFRYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT
Ga0182134_10241521	3300015324	Switchgrass Phyllosphere	MTTIIVTNEFVQLIEILSLIGSCVKEAPQFHYSKRRSRFSTHLYVKTKDLSSPKCHKVEKDT*
Ga0182134_10532651	3300015324	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFDYSKRRSRYSTQVYNKTKDLSSPKCRKVEKNT*
Ga0182134_10545511	3300015324	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEASQFHYSKMRSRYSTQVYNKTKDLSSPNCRKVEKDT*
Ga0182148_11025821	3300015325	Switchgrass Phyllosphere	MTIIIVINEFVPLNKILSLIGSYVKEVSKFHYPKMRSRYSTQVYNKTKDLSSPKCRKVGKDT*
Ga0182166_10179101	3300015326	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSFQVYNKTKDFSSPKCRKVEKDT*
Ga0182166_10514831	3300015326	Switchgrass Phyllosphere	MFRLMTTIIVTNEFVQHNEILSLIGSYVKEAPKFHYSKRRSRYSTQIFNKTKDLFSPKCRKVEKDT
Ga0182166_11009681	3300015326	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKNKDLSSPKCCKVEKDTYVSIGFVVL*
Ga0182114_10496391	3300015327	Switchgrass Phyllosphere	MTTIIVTNEFVQLNESLSLIWSYVKEAPQFHYLKRRSRYSTQIYIKTKDLSSPKCRK
Ga0182114_10587831	3300015327	Switchgrass Phyllosphere	MSNVKGKHLGPQGMFR*LMTTIIATNKFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPK
Ga0182114_11040711	3300015327	Switchgrass Phyllosphere	EILSLVGSYVKEAPKFHYSKRQSRYSTQVYNKTKDLSSPKCRKIEKDT*
Ga0182153_10526661	3300015328	Switchgrass Phyllosphere	MTTIIVINEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPK
Ga0182153_11142221	3300015328	Switchgrass Phyllosphere	NEFVQLNEILSLIVSYVKEAPKFHYSKRRSRYSTQISNKTKNLSSPKCRKVETDT*
Ga0182153_11271651	3300015328	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKNLSSPKCHKVEK
Ga0182153_11436161	3300015328	Switchgrass Phyllosphere	NEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDTYVSIGFIVL*
Ga0182135_10764142	3300015329	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTNDLSSP
Ga0182152_10188832	3300015330	Switchgrass Phyllosphere	MITIIVTNEFVQLNEILLLIGSYVKEVPQFQYSKRRSRYSTQIYNKTKDLPSP
Ga0182131_10434801	3300015331	Switchgrass Phyllosphere	MTTIIVTNEFVQLNKILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSP
Ga0182131_10545011	3300015331	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIESYVKEASQFHYSNRRSQYSTQVNIKTNDISSPKGHKVEKDT*
Ga0182117_10191641	3300015332	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILTLIGSYVKEALKFHHSKRRSWYSTQVYNKTKDLSSPKCHKVE
Ga0182117_10709501	3300015332	Switchgrass Phyllosphere	MTTIIVTNEFVQLNETLSLIWSYVKEAPQFHYSKRRSRYSTQIYIKTKDLSSPKCRKV
Ga0182117_10979741	3300015332	Switchgrass Phyllosphere	MTIIIVTNEFVELNEILSLIGSYVKEGPQFHYSKRRSRYSTQVCNKTKDLSSPKCHKIENDT*
Ga0182147_10703521	3300015333	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKKCSRYSTQVYNKTKDLSSPKCRKV
Ga0182147_11080891	3300015333	Switchgrass Phyllosphere	MITIFVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSQYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182147_11287611	3300015333	Switchgrass Phyllosphere	VTNKFVQFNKILSLIGSYVKEAPKFHYSKRQSLYSTQVYNKTKDFSSPKCRKVEKDT*
Ga0182147_11587601	3300015333	Switchgrass Phyllosphere	MTNEFVQLNESLSLIWSFVKEAPQFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKTLR
Ga0182132_10309492	3300015334	Switchgrass Phyllosphere	MTIIIVTNEFVQLNEILSLIRSYVKEAPQFYYSKRRSRYLTQIYNKTKDLSSP
Ga0182132_10828952	3300015334	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIRSYVKEAPKFHYSERQSRYSTQIYNKTKDLSSPKCCKVE
Ga0182132_11156762	3300015334	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILLHIGSYVKEARKFLYSKRRSRYSTQVYNKTKDLSSPK
Ga0182116_10706221	3300015335	Switchgrass Phyllosphere	MSTIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQIYNKTKDLFSPKCRKVEKDT*
Ga0182151_10198521	3300015337	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIESYVKEASQFHYLNRRSQYSTQVNIKTNDLS
Ga0182151_11319512	3300015337	Switchgrass Phyllosphere	MTIIIVTNEFVQINETLSLIWSYVKHAPKFHYSKRRPQYLTLIYVKTKDLSSPKCHKVEQDT*
Ga0182137_10561581	3300015338	Switchgrass Phyllosphere	VTNEFVQLNEILSLIGSYVKETPKFHHSKRRSRYSTQLYNKTKDLSSPKCRKVEKDT*
Ga0182137_10737943	3300015338	Switchgrass Phyllosphere	MTTIIVTNKFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKC
Ga0182137_11133822	3300015338	Switchgrass Phyllosphere	VTNEFVQLNEILSLIGSYVKEVPKFHYSKRRSWYPTQVYNKTKDLSSPMCRKVEM
Ga0182149_10243431	3300015339	Switchgrass Phyllosphere	VTNEFVQLNEFLSLIWSYVKEAPQFHYSKRRSRYSTQAYKKTKDLSSPKCRKVEK
Ga0182149_11283391	3300015339	Switchgrass Phyllosphere	MTTIFVTNEFVQLNETLSLIWSYIKEAPQFHYSKRRSRYSTQAYKKTKDLSSPKCRKVEK
Ga0182133_11213831	3300015340	Switchgrass Phyllosphere	NEILSLIGSYVKEAPKFHYPKRRSRYSTQIYNKTKDLSSPKCQKVEKDT*
Ga0182115_11368461	3300015348	Switchgrass Phyllosphere	MITIFVTNEFVQLNEILSLIGSYAKEAPQFHYSKR*SQYSTQVYNKTKDLSSPKCRKVEKDT
Ga0182115_12343631	3300015348	Switchgrass Phyllosphere	VNNDNHYCDNEFVQLNETISLNWSYVKEAPKFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT*
Ga0182115_12862991	3300015348	Switchgrass Phyllosphere	MTIIIVINEFVPLNKILSLIGSYVKEVSKFHYPKMRSRYSTQVYNKTKDLSSLKCRKVE
Ga0182185_10402791	3300015349	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIESYVKEASQFHYSNRRSQYSTQVNIKTNDLSSPKCHKVEKDT*
Ga0182185_11181911	3300015349	Switchgrass Phyllosphere	MTIIIVTNEFVHLNEILSLIGSYVKDAPKFHYSKR*SRYSTQAYNKTKDIS
Ga0182185_11252461	3300015349	Switchgrass Phyllosphere	MFRLMTIIIVTNEFVQLNEILSLIGSYVKDAPKFHYSKRRSRYSTQVYNKTKDPSSPKCRKVEKDT
Ga0182163_10996501	3300015350	Switchgrass Phyllosphere	MTTIIVTNEFVHLNEILSLIGSYVKDAPKFHYSKMRSWYSTQVYNKTKDLSSPKC
Ga0182163_12633251	3300015350	Switchgrass Phyllosphere	MTTVIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQVCNKTKDLSSPKRRKVEK
Ga0182169_11268531	3300015352	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQLYVKTKDLSSPMCHKVEKDT*
Ga0182169_11360911	3300015352	Switchgrass Phyllosphere	MTTIIVTNEFVQLNRSLSLIWSYVKEAPQFYYSKRRSRYSTQIYNKTKDLSSPKCRKVE
Ga0182169_11799681	3300015352	Switchgrass Phyllosphere	MFRLMTTIIVTNVFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSHKCRKVEKDT
Ga0182169_12599851	3300015352	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRYRYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182167_12351632	3300015354	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSFQVYNKTKDLSSPKCR
Ga0182167_12496282	3300015354	Switchgrass Phyllosphere	MTIIIVTNEFVQLNESLLLIWSYVKEAPKFHYSKRRFRYSTQIYIKTKDLSSPKCLKVEKDT*
Ga0182167_12630101	3300015354	Switchgrass Phyllosphere	MTTIIVTNDFVQLNEILSLIGSYVKEAPKFHYSKRQSLYSTQVYNKTKYFSSPKCRKVEKDT*
Ga0182167_12893072	3300015354	Switchgrass Phyllosphere	MQLNEILSLIGSYVKEAPKFHHSKMRSWYSTQVYNKTKDLSSPKCRKVEKDT*
Ga0182197_10410461	3300017408	Switchgrass Phyllosphere	CRAVHPRPHPQRPMRTEGCKHLGPQGMFRWLMTTIIVTNEFVQLNRSLSLICQKRPLNFGYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT
Ga0182197_10511571	3300017408	Switchgrass Phyllosphere	MTIIIVTNEFVHLNEILSLIGSYVKEAPKFHYSKRRSQYSTQVYNKTKDLSSPKCRKVEKDTYVSIGFIVL
Ga0182195_10440691	3300017414	Switchgrass Phyllosphere	MTTIIVTNEFVQLNELLSLIGSYVKEAPQFHYSKRRSRYSTQIYNKTKDLSSPKCHKVE
Ga0182195_11579521	3300017414	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIWSYVKEALQFHYSKRRSPYSTQVCNKTKDLSSPKCHKVEKGHLG
Ga0182213_11926691	3300017421	Switchgrass Phyllosphere	MTTIIVTNEFVQLNKILSLIGSYVKEAPQFQYLKRRSRYSTQIYVKTKDLSSPKCHKAEK
Ga0182196_10503221	3300017432	Switchgrass Phyllosphere	MTTIIVTNEFVQLDEILLLIWSYVKEALQFYYSKRRSPYSTQVCNKTKDLSSPKCHKVEKDT
Ga0182200_10716711	3300017439	Switchgrass Phyllosphere	MTTIIVTNEFVQLNDILSLIGSYVKEAPQFHYSKRRSWYSTQVYNKTKDLSSPKYRKVEKDT
Ga0182214_10869201	3300017440	Switchgrass Phyllosphere	EILSLIGSYVKEAPKSHYSKMRSWYPTQVYNKTKDLSSPKCRKVEKDT
Ga0182198_11978841	3300017445	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIXSYVKETPKFHYSKRRSQYSTQVYNKTKDLS
Ga0182215_10746211	3300017447	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQAYNKTKDLSSPKCRKVEKDT
Ga0182215_10822112	3300017447	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDTYVSIGFIVL
Ga0182212_11130562	3300017691	Switchgrass Phyllosphere	MTIIIVTNEFVQLNEILSLIGSYVKEGPKFHYSKRQSRYSTQVYNKTKDLSSPKCRKIEN
Ga0182216_11447261	3300017693	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0182211_10851841	3300017694	Switchgrass Phyllosphere	FVQLKEILLLIRSYVKEAHKFHYSKRRSRYSTQVYNKTMDLSSPKCRKVEKDT
Ga0182211_11069092	3300017694	Switchgrass Phyllosphere	MTTIIVANEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSFQVYNKTKDLSSPKCH
Ga0207641_119831211	3300026088	Switchgrass Rhizosphere	MTTIIVTNEFVQLNESLSLIWTYVKEAPQFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT
Ga0268328_10541831	3300028050	Phyllosphere	TIIIVTNEFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKYRKVEKN
Ga0268306_10217161	3300028054	Phyllosphere	MTTIIVTNEFVQFNEILSLIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKNT
Ga0268330_10078291	3300028056	Phyllosphere	TIIVTNEFVQLNEILSLIGSYVKEASQFHYSKRRSQYSTQVNIKTKDLSSPKCHKVEKDT
Ga0268332_10449321	3300028058	Phyllosphere	IVCVVINHQKGGDXKHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0268340_10086882	3300028064	Phyllosphere	MTPIIVTNEFVQLNEILLLIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKC
Ga0268308_10328272	3300028151	Phyllosphere	MTTIIVTNEFVQLNKILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDPSSP
Ga0268304_10048461	3300028256	Phyllosphere	TIIVTNEFVQLNEILSLIGSYVKEAPQFQYSKRRSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0268310_10021211	3300028262	Phyllosphere	QKGGDCKHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIESYVKEASQFHYSNRRSQFSTQVNIKTNDLSSPKCHKVEKDT
Ga0268323_10093111	3300028471	Phyllosphere	TNEFVQLNEILSLIGSYVKEAPKFHHSKRRSWYSTQVYNKTKDLSSPKCRKVEKDT
Ga0268315_10207691	3300028472	Phyllosphere	MSNVXKGXKHLGPQGMFRXLMTTIIATNKFVQLNEILSLIRSYVKEAPKFHYSKRRSRYSTQVYNKTKDPSS
Ga0061013_127387551	3300030772	Fungi-Associated Bovine Rumen	TIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0061019_142751551	3300031118	Fungi-Associated Bovine Rumen	VCVVINHQKGGDCKHLGPQGMFRRLVITIIVTNEFVQLNEILSHIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0214503_10185801	3300032466	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSQYSTQVYNKIKDLSSTKCRKVEKDT
Ga0214488_10006972	3300032467	Switchgrass Phyllosphere	MTTILMTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQVCNKTKDLSSPKCRKVEKDT
Ga0214488_10179531	3300032467	Switchgrass Phyllosphere	QLNEILSLIGSYVKEAPQFHYSKRRSQYSTQVCNKTKDLSSPKCRKVEKDT
Ga0214502_10222261	3300032514	Switchgrass Phyllosphere	MTIIIVTNEFVQLNESLSLIWSFVKKAPKFRYSKRRSRYSTQIYIKTKDLSSPKCRK
Ga0214500_10026882	3300032589	Switchgrass Phyllosphere	MTTIIVTNEFVQFNRSLSLIWSYVKEAPQFRYSKRRSRYSTQIYNKTKDLSSPK
Ga0214489_10147291	3300032590	Switchgrass Phyllosphere	MTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQVCNKTKDLSSPKCRKVEKDT
Ga0214504_10218721	3300032592	Switchgrass Phyllosphere	MQLNEILSLIGSYVKEAPKFHYLKRRSWYSTQVYNKTKDLSSPKCRKVEKDT
Ga0214485_10053604	3300032698	Switchgrass Phyllosphere	MFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKSXSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0214494_10534501	3300032699	Switchgrass Phyllosphere	XKHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQIYNKTKDLSSPKCRKVEKDT
Ga0214494_10547491	3300032699	Switchgrass Phyllosphere	XKHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0314745_10133261	3300032812	Switchgrass Phyllosphere	QKGGDXKHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKSXSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0314723_10252751	3300032823	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKSRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0314735_10784951	3300032824	Switchgrass Phyllosphere	MFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0314743_10037693	3300032844	Switchgrass Phyllosphere	MFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKSRSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0314739_10417981	3300032913	Switchgrass Phyllosphere	MTTITVTDEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSNQVYNKTKDICSPKCRKVEKDT
Ga0314750_11416801	3300032914	Switchgrass Phyllosphere	MTNEFVQLNESLSLISSFVKEAPQFHYSKRQSRYSTQICNKTKDLSSPKC
Ga0314749_11052451	3300032915	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIWSYVKEALQFRYSKRRSRYSTQIYNKTKDLSSPKCRKVENDT
Ga0314734_10898621	3300032916	Switchgrass Phyllosphere	LLNEILSLIGSYVKEAPKFYYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT
Ga0314741_11454771	3300032934	Switchgrass Phyllosphere	MQLNEILSLIGSYVKEAPKFYYSKRRSRYSTQVYNKTKDLSSPKCRNVEKDT
Ga0314729_1002553	3300032953	Switchgrass Phyllosphere	MTTIIVTNEFVQLNEILSLIGSYVKEAPQFHYSKSXSRYSTQVYNKTKDLSSPKCRKIEKDT
Ga0314760_10992751	3300033530	Switchgrass Phyllosphere	MFRXLMTTIIVTNEFMQLNEILSLIGSYVKETPKFHHSKKRSWYSTQVYNKTKDLSSPKCRKVEKYT
Ga0314757_11660861	3300033534	Switchgrass Phyllosphere	KHLGPQGMFRXLMTTIIVTNEFVQLNEILSLIGSYVKEAPKFHYSKRRSRYSTQVYNKTKDLSSPKCRKVEKDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences