Metagenome Family F044851

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044851
Family Type	Metagenome
Number of Sequences	153
Average Sequence Length	54 residues
Representative Sequence	MRDSWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNLRASLTILGVVALAFVVWQ
Number of Associated Samples	67
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.92 %
% of genes near scaffold ends (potentially truncated)	93.46 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.052 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.673 % of family members)
Environment Ontology (ENVO)	Unclassified (73.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.510 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.44% β-sheet: 0.00% Coil/Unstructured: 47.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF03459	TOBE	9.80
PF02518	HATPase_c	4.58
PF04392	ABC_sub_bind	3.92
PF00005	ABC_tran	3.27
PF14707	Sulfatase_C	3.27
PF08220	HTH_DeoR	2.61
PF13531	SBP_bac_11	2.61
PF11146	DUF2905	1.96
PF00903	Glyoxalase	1.96
PF00080	Sod_Cu	1.31
PF01464	SLT	1.31
PF11604	CusF_Ec	1.31
PF13426	PAS_9	1.31
PF07452	CHRD	1.31
PF03401	TctC	0.65
PF12221	HflK_N	0.65
PF00571	CBS	0.65
PF04226	Transgly_assoc	0.65
PF00589	Phage_integrase	0.65
PF13304	AAA_21	0.65
PF05589	DUF768	0.65
PF03466	LysR_substrate	0.65
PF13185	GAF_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.92
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	1.31
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.65
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
All Organisms	root	All Organisms	35.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
cellular organisms	root	All Organisms → cellular organisms	35.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.31 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.65 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.27 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.65 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.65 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.96 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.65 %
unclassified Paracoccus (in: a-proteobacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria)	0.65 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.05 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Paracoccus sp. PAR01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria) → Paracoccus sp. PAR01	0.65 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.65 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10115807	Not Available	561	Open in IMG/M
3300004152\|Ga0062386_100261385	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300005332\|Ga0066388_102885597	Not Available	878	Open in IMG/M
3300005764\|Ga0066903_102503532	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005764\|Ga0066903_103305093	Not Available	871	Open in IMG/M
3300005764\|Ga0066903_106452664	Not Available	611	Open in IMG/M
3300005764\|Ga0066903_107746886	Not Available	552	Open in IMG/M
3300005764\|Ga0066903_108256837	Not Available	532	Open in IMG/M
3300005764\|Ga0066903_108801300	Not Available	512	Open in IMG/M
3300009792\|Ga0126374_10499937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300009792\|Ga0126374_10791110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	724	Open in IMG/M
3300009792\|Ga0126374_11455198	Not Available	560	Open in IMG/M
3300010043\|Ga0126380_11836112	Not Available	549	Open in IMG/M
3300010048\|Ga0126373_11481453	Not Available	744	Open in IMG/M
3300010048\|Ga0126373_11521070	Not Available	734	Open in IMG/M
3300010048\|Ga0126373_11597161	Not Available	717	Open in IMG/M
3300010048\|Ga0126373_12298530	Not Available	600	Open in IMG/M
3300010048\|Ga0126373_12725112	Not Available	552	Open in IMG/M
3300010048\|Ga0126373_12865688	Not Available	538	Open in IMG/M
3300010366\|Ga0126379_11383042	Not Available	810	Open in IMG/M
3300010376\|Ga0126381_100461881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1783	Open in IMG/M
3300010376\|Ga0126381_100881624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300010376\|Ga0126381_100968378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1227	Open in IMG/M
3300010376\|Ga0126381_102084891	Not Available	817	Open in IMG/M
3300010376\|Ga0126381_102829783	Not Available	692	Open in IMG/M
3300010398\|Ga0126383_11051889	Not Available	903	Open in IMG/M
3300010398\|Ga0126383_11777186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	705	Open in IMG/M
3300012948\|Ga0126375_11882029	Not Available	525	Open in IMG/M
3300012971\|Ga0126369_10792789	Not Available	1029	Open in IMG/M
3300012971\|Ga0126369_10912966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300016270\|Ga0182036_10972083	Not Available	699	Open in IMG/M
3300016294\|Ga0182041_11445262	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300016294\|Ga0182041_11455190	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300016294\|Ga0182041_11888757	Not Available	555	Open in IMG/M
3300016319\|Ga0182033_10048653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria) → Paracoccus sp. PAR01	2854	Open in IMG/M
3300016319\|Ga0182033_10191053	Not Available	1621	Open in IMG/M
3300016319\|Ga0182033_10352907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1231	Open in IMG/M
3300016319\|Ga0182033_11972544	Not Available	531	Open in IMG/M
3300016341\|Ga0182035_10180305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1652	Open in IMG/M
3300016341\|Ga0182035_10513454	Not Available	1025	Open in IMG/M
3300016341\|Ga0182035_10728652	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300016341\|Ga0182035_11697030	Not Available	571	Open in IMG/M
3300016357\|Ga0182032_10147481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1736	Open in IMG/M
3300016357\|Ga0182032_10276069	Not Available	1317	Open in IMG/M
3300016357\|Ga0182032_10380682	Not Available	1136	Open in IMG/M
3300016357\|Ga0182032_11718171	Not Available	547	Open in IMG/M
3300016371\|Ga0182034_10070955	All Organisms → cellular organisms → Bacteria → Proteobacteria	2389	Open in IMG/M
3300016371\|Ga0182034_10672878	Not Available	878	Open in IMG/M
3300016371\|Ga0182034_11578765	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300016371\|Ga0182034_11909522	Not Available	524	Open in IMG/M
3300016387\|Ga0182040_10175854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300016387\|Ga0182040_10433095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300016387\|Ga0182040_11569744	Not Available	560	Open in IMG/M
3300016387\|Ga0182040_11940649	Not Available	505	Open in IMG/M
3300016404\|Ga0182037_10352174	Not Available	1200	Open in IMG/M
3300016404\|Ga0182037_10805702	Not Available	810	Open in IMG/M
3300016404\|Ga0182037_10842243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300016404\|Ga0182037_10918875	Not Available	760	Open in IMG/M
3300016422\|Ga0182039_11081908	Not Available	721	Open in IMG/M
3300016422\|Ga0182039_11164956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	695	Open in IMG/M
3300016422\|Ga0182039_11397339	Not Available	636	Open in IMG/M
3300016422\|Ga0182039_11838343	Not Available	555	Open in IMG/M
3300016445\|Ga0182038_10165079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1707	Open in IMG/M
3300016445\|Ga0182038_10195957	Not Available	1585	Open in IMG/M
3300016445\|Ga0182038_10244845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1438	Open in IMG/M
3300016445\|Ga0182038_10489869	Not Available	1047	Open in IMG/M
3300017966\|Ga0187776_10991970	Not Available	617	Open in IMG/M
3300017974\|Ga0187777_10167707	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300017994\|Ga0187822_10033134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1385	Open in IMG/M
3300018060\|Ga0187765_10132125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1393	Open in IMG/M
3300018060\|Ga0187765_10482106	Not Available	781	Open in IMG/M
3300021560\|Ga0126371_11282855	Not Available	866	Open in IMG/M
3300021560\|Ga0126371_12618935	Not Available	611	Open in IMG/M
3300027824\|Ga0209040_10027970	All Organisms → cellular organisms → Bacteria → Proteobacteria	3594	Open in IMG/M
3300031446\|Ga0170820_11107795	Not Available	1063	Open in IMG/M
3300031545\|Ga0318541_10562418	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031545\|Ga0318541_10687917	Not Available	571	Open in IMG/M
3300031573\|Ga0310915_10587749	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300031573\|Ga0310915_10852055	Not Available	640	Open in IMG/M
3300031573\|Ga0310915_10889934	Not Available	624	Open in IMG/M
3300031668\|Ga0318542_10198786	Not Available	1011	Open in IMG/M
3300031679\|Ga0318561_10331380	Not Available	834	Open in IMG/M
3300031682\|Ga0318560_10162130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1186	Open in IMG/M
3300031713\|Ga0318496_10680905	Not Available	567	Open in IMG/M
3300031719\|Ga0306917_11524178	Not Available	514	Open in IMG/M
3300031744\|Ga0306918_10413267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1052	Open in IMG/M
3300031744\|Ga0306918_10982096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300031744\|Ga0306918_11007543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	647	Open in IMG/M
3300031744\|Ga0306918_11208154	Not Available	583	Open in IMG/M
3300031747\|Ga0318502_10552148	Not Available	692	Open in IMG/M
3300031763\|Ga0318537_10329132	Not Available	565	Open in IMG/M
3300031768\|Ga0318509_10343490	Not Available	835	Open in IMG/M
3300031770\|Ga0318521_10386081	Not Available	833	Open in IMG/M
3300031795\|Ga0318557_10457564	Not Available	587	Open in IMG/M
3300031797\|Ga0318550_10492565	Not Available	592	Open in IMG/M
3300031819\|Ga0318568_10932489	Not Available	537	Open in IMG/M
3300031833\|Ga0310917_10073318	Not Available	2153	Open in IMG/M
3300031833\|Ga0310917_10122235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1696	Open in IMG/M
3300031833\|Ga0310917_10782915	Not Available	644	Open in IMG/M
3300031879\|Ga0306919_10180010	Not Available	1560	Open in IMG/M
3300031879\|Ga0306919_10225083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1403	Open in IMG/M
3300031879\|Ga0306919_10264084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1298	Open in IMG/M
3300031879\|Ga0306919_10286862	Not Available	1246	Open in IMG/M
3300031879\|Ga0306919_10436079	Not Available	1007	Open in IMG/M
3300031879\|Ga0306919_11135102	Not Available	595	Open in IMG/M
3300031879\|Ga0306919_11267530	Not Available	559	Open in IMG/M
3300031890\|Ga0306925_10146035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2544	Open in IMG/M
3300031890\|Ga0306925_10343056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1604	Open in IMG/M
3300031890\|Ga0306925_10349344	Not Available	1588	Open in IMG/M
3300031890\|Ga0306925_11060176	Not Available	822	Open in IMG/M
3300031894\|Ga0318522_10197142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	762	Open in IMG/M
3300031897\|Ga0318520_10345547	Not Available	902	Open in IMG/M
3300031910\|Ga0306923_10075911	All Organisms → cellular organisms → Bacteria	3759	Open in IMG/M
3300031912\|Ga0306921_10426615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1546	Open in IMG/M
3300031912\|Ga0306921_10439746	Not Available	1520	Open in IMG/M
3300031912\|Ga0306921_10520561	Not Available	1381	Open in IMG/M
3300031912\|Ga0306921_11932988	Not Available	630	Open in IMG/M
3300031912\|Ga0306921_12131766	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031912\|Ga0306921_12166228	Not Available	587	Open in IMG/M
3300031912\|Ga0306921_12279395	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031941\|Ga0310912_10136945	Not Available	1837	Open in IMG/M
3300031941\|Ga0310912_10576197	Not Available	876	Open in IMG/M
3300031941\|Ga0310912_10783373	Not Available	737	Open in IMG/M
3300031942\|Ga0310916_10972250	Not Available	709	Open in IMG/M
3300031945\|Ga0310913_10124179	Not Available	1765	Open in IMG/M
3300031945\|Ga0310913_10605443	Not Available	777	Open in IMG/M
3300031945\|Ga0310913_10962320	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031954\|Ga0306926_11509255	Not Available	775	Open in IMG/M
3300031954\|Ga0306926_11528316	Not Available	769	Open in IMG/M
3300031954\|Ga0306926_11594615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	749	Open in IMG/M
3300031962\|Ga0307479_10216212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1889	Open in IMG/M
3300032042\|Ga0318545_10134774	Not Available	875	Open in IMG/M
3300032044\|Ga0318558_10210924	Not Available	949	Open in IMG/M
3300032051\|Ga0318532_10194987	Not Available	719	Open in IMG/M
3300032055\|Ga0318575_10553142	Not Available	584	Open in IMG/M
3300032059\|Ga0318533_10418604	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300032063\|Ga0318504_10324455	Not Available	730	Open in IMG/M
3300032066\|Ga0318514_10370103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300032076\|Ga0306924_10197421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2310	Open in IMG/M
3300032076\|Ga0306924_10237494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	2093	Open in IMG/M
3300032076\|Ga0306924_10466717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300032076\|Ga0306924_11878551	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300032076\|Ga0306924_12192795	Not Available	563	Open in IMG/M
3300032261\|Ga0306920_100760123	Not Available	1425	Open in IMG/M
3300032261\|Ga0306920_100869926	Not Available	1319	Open in IMG/M
3300032261\|Ga0306920_100903051	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300032261\|Ga0306920_102747505	Not Available	671	Open in IMG/M
3300032261\|Ga0306920_103769126	Not Available	555	Open in IMG/M
3300033289\|Ga0310914_11582264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.04%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.04%
Freshwater	Environmental → Aquatic → Freshwater	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.20%
Loam	Environmental → Terrestrial → Soil → Loam	4.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101158071	3300000793	Forest Soil	MHDGWIIYAAFGVLVGLLLWRVATQRNSAEAGNRRVALIILGVVA
Ga0062386_1002613851	3300004152	Bog Forest Soil	MRDGWIIYAIFGVLVCLLLWRVATQWKVKNAEAENLRASLIILGVVALVLVVWQCVRQ*
Ga0066388_1028855971	3300005332	Tropical Forest Soil	MRDSWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNLRASLTILGVVALAFVVWQ
Ga0066903_1025035322	3300005764	Tropical Forest Soil	LRDGWIIYAVLGVLVCLLLWRVATQWKVKSAEAEHLRASLIVLGVVALAFVVWQ
Ga0066903_1033050931	3300005764	Tropical Forest Soil	VHDGWIIYAVFGVLVCLLLWQVATQWKSAEAQNLRASLIVLGVVALAFVLWQ
Ga0066903_1064526642	3300005764	Tropical Forest Soil	MRDDWIIYAAFGVLVCLLLWRVVTQWNAEAGNRRASLGMLGVVAL
Ga0066903_1077468862	3300005764	Tropical Forest Soil	MRDDWIIYAAFGVLVCLLLWRIAAQRNSAEAGNRRVSLTILGIVALAMVVWQGV
Ga0066903_1082568371	3300005764	Tropical Forest Soil	MRDSWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVAL
Ga0066903_1088013002	3300005764	Tropical Forest Soil	VSAKVFMSGSWVVYAAFGVLVCLLLWRVATQRDAGNLRSSLILFGIAALVMVV
Ga0126374_104999371	3300009792	Tropical Forest Soil	MGDGWIIYAVFGVLVCLLLWRVATRRNVNSAGNLRASLIILGVVAL
Ga0126374_107911101	3300009792	Tropical Forest Soil	MRDGWIIYAAFGVLVCLLLLQVATQRRNVNGAEAGNRRASLII
Ga0126374_114551981	3300009792	Tropical Forest Soil	MRDDWIIYAAFGVLVCLLLWRVATQRNVTGADAGNRRISLTILGVVALVMVGW
Ga0126380_118361121	3300010043	Tropical Forest Soil	MRDGWIIYAAFGVLVCLLLWRVATQWNVNSAESGNRRASLIILGVVALAMVVWQGARLLSVGTTTA
Ga0126373_114814532	3300010048	Tropical Forest Soil	MHDGWIIYAAFGVLVCLLLWRVATQRNAGNLRSSLIILGVAALVMVVWQG
Ga0126373_115210701	3300010048	Tropical Forest Soil	VAVRDGWIIYAVFGVLVCLLLWRVATQRNVDSAEAGNRRASLIILVILG
Ga0126373_115971611	3300010048	Tropical Forest Soil	MVAMHDSWIISAVFGVLICLLLWRAATQRSAENLRSSLIIFGVAALVVVVWQ
Ga0126373_122985303	3300010048	Tropical Forest Soil	LRDGWIIYAVLGVLVCLLLWRVATQWKVKSAEAEHLRASLIVLGVVALAFVVW
Ga0126373_127251121	3300010048	Tropical Forest Soil	MPDSWFIYAAFGVLVCLLLWRAATQWKVKSAEAENLRASLIILGVVALTTVVWQ
Ga0126373_128656881	3300010048	Tropical Forest Soil	MPENWIIYAIFGVLVCLLLWRVATQWKVKNAEAENLRVSVVILGVVALVFVV
Ga0126379_113830421	3300010366	Tropical Forest Soil	MHDGWIIYAAFGVLVCLLLWRVATQRNAGNLRSSLIILGVAALVIVAWQGARLFG
Ga0126381_1004618811	3300010376	Tropical Forest Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNVTGAEAGNRRASLIILAVVA
Ga0126381_1008816241	3300010376	Tropical Forest Soil	MRDGWIIYAVFGLLVCLLLWRVATERNAGILRSSLIIFGIAALVVVV
Ga0126381_1009683781	3300010376	Tropical Forest Soil	MHDGWIIYAAFGVLVCLLLWRAVTQWNVSSAEAGNLRASLTILGVVALAFVVWQ
Ga0126381_1020848911	3300010376	Tropical Forest Soil	MRDGWIVYAAFGVLVCLLLWRVATQRDAGNLRSSLILFGIAALVM
Ga0126381_1028297832	3300010376	Tropical Forest Soil	MRDSWIIYAIFGALVCLLLWRVATQRNVNSAEAGNRRASLIILGVVALVMVVW
Ga0126383_110518891	3300010398	Tropical Forest Soil	MPDSWIIYAAFGVLVCLLLWRVATQWNVNGAEAGNLRASVTILGVVAFAFVV
Ga0126383_117771861	3300010398	Tropical Forest Soil	LSAVPFNLLLSAKVAMGDGWIIYAVFGVLVCLLLWRVATRRNVNSAANLRASLIILGVVALAFVVWQGVRLFPVGATT
Ga0126375_118820292	3300012948	Tropical Forest Soil	MHDGWIIYAAFGVLVCLLLWRVATQWNVNSAESGNRRASLIILGVVALVMVAWQCVRLFAVGAT
Ga0126369_107927891	3300012971	Tropical Forest Soil	MHVTVARAWLWQRVAMRDSWIVYATFGVLVCLLVWRVATQRNAGNLRASLIILGVAALTM
Ga0126369_109129661	3300012971	Tropical Forest Soil	MGDGWIIYAVFGVLVCLLLWRVATRRNVNSAGNLRASLIILGVVALAFVVWQGVRLFPVGATTAQ
Ga0182036_107863772	3300016270	Soil	VRAGWIIYAIFGVLVCLLVRWVATQWKVKSTEAENLRISGLILGFVAFVFVVDQGVRLALPI
Ga0182036_109720832	3300016270	Soil	MRDGWVIYAAFGVLVCLLLWRVATQWNVSSAEAGNRRASLTILGVVALAFVIWQGAQLLDVGAPAAH
Ga0182041_114452621	3300016294	Soil	MRDGWIIYAIFGVLVCLLLWRVATQRNVNSAEVGNRRASLIILGAVALV
Ga0182041_114551901	3300016294	Soil	MAMRDGWIIYAVFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVALA
Ga0182041_118887571	3300016294	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNAEAGNRRISLTILGIVALAMVAWQGVRLFPIEA
Ga0182033_100486531	3300016319	Soil	MRDGWIIYAAFGVLLCLLLWRTATQWNVNGAEAGNLRASLTILGVVALAFVVW
Ga0182033_101910534	3300016319	Soil	MSDSWIIYAIFGVLVCLLLWRAATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTED
Ga0182033_103529071	3300016319	Soil	VRDGWIIYAIFGVLVCLLLWRVATQWKSAEAHNLRAPLIVLGVVGLAFVVWQ
Ga0182033_105764313	3300016319	Soil	GVLVCLLLWRVATQWKVKSQQAENLRASFIILAVVALAFVVWQYVQQASPMAVDSQG
Ga0182033_119725441	3300016319	Soil	MRDWIIYAVFGVLVCLLLWRVATQRNAGNRRASLIILGVVALAMVAWQ
Ga0182035_101803054	3300016341	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTE
Ga0182035_105134542	3300016341	Soil	MRDGWIIYAAFGVLLCLLLWRTATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLL
Ga0182035_107286523	3300016341	Soil	MRDGWLIYAAFGVLVCLLLWRVATQWNGSSAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAH
Ga0182035_111338761	3300016341	Soil	MAVRDGWIIYAIVGVIGYLLLWRVATEWKVRNAEAENLRVAVVILGFVALLFVVVQGVRQALPI
Ga0182035_116970301	3300016341	Soil	MRDSWIIYAAFGVLVCLLLWRVAPQRNTGNLRALLIILGVVALVMVVWQ
Ga0182032_101474811	3300016357	Soil	VRDGWVIYAIFGVLVCLLLWRIATQWRNAEAANLRISLTILGIVA
Ga0182032_102760691	3300016357	Soil	MRDGWIIYAAFGVLLCMRLWRTAKQWNVNGAEDGNLRASLTI
Ga0182032_103806821	3300016357	Soil	VHDGWIIYAIFGVLVCLLLWRVATQWKVKSAEAENLRASLIILGVVALAFVVWQFVQQASPI
Ga0182032_117181711	3300016357	Soil	VPHDWIIYAAFGVLVCLLLWRAATQRNVNSAEAGNRRASLIILGVVALAM
Ga0182034_100709551	3300016371	Soil	VPHDWIIYAAFGVLVCLLLWRAATQRNVNSAEAGNRRASLIILGVVTLAMAEWHCVRLLDVGSTTA
Ga0182034_106728782	3300016371	Soil	VRDGWIIYAIFGVLVCLLLWRIATQWKVKSAEAENLRASLIILGVVALA
Ga0182034_115787652	3300016371	Soil	MSDGWIIYAAFGVLACLLLWRVATQRDAGNLRSSLIIFGVAALVMVVWQGARLLGVGATT
Ga0182034_119095221	3300016371	Soil	MRDGWLIYAAFGVLVCLLLWRVATQWNGSSAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHT
Ga0182040_101758541	3300016387	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNGSSAEAGNLRASLTILGVV
Ga0182040_104330952	3300016387	Soil	MRDGWVIYAAFGVLVCLLLWRVATRRNNLRASLITLGVVALVMAVWLSVRLLAVGATTAYTE
Ga0182040_115697441	3300016387	Soil	MRDGWLIYAAFGVLVCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLG
Ga0182040_119406491	3300016387	Soil	MGDGWIIYAAFGVLVCLILWRAATQWVNGAEARNLRASLTILGVVALAFVVWQGVRLLG
Ga0182037_103521741	3300016404	Soil	MAVRDSWIIYAIFGVLMCLLLRRVGTQWKVKSAEAENLRVSVVILGFVALVF
Ga0182037_108057022	3300016404	Soil	MRDSWIIYAVFGVLVCLLLWRVATQRNAGNRRASLIILGVVALAMVAWQGVRLLPVGVITAHTED
Ga0182037_108422432	3300016404	Soil	MRDGWLIYAAFGVLVCLLLWRLATQRTAGNLRSSLIIFGVAA
Ga0182037_109188751	3300016404	Soil	MRDSWIIYAAFGVLVCLLLWRVATQWRTAEAGNLRISLTILGIVALVMVVWQGAR
Ga0182039_110819081	3300016422	Soil	VPHDWIIYAAFGVLVCLLLWRAATQRNVNSAEAGNRRASLIILGVVALAMV
Ga0182039_111649561	3300016422	Soil	MPVHDDWIIYAAFGVLVCLLLWRIATQWRNAEAANLRISLTILGIVAL
Ga0182039_113973391	3300016422	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNVTGAEAGNRRASLTSLGVVAL
Ga0182039_118383431	3300016422	Soil	MRDWIIYAVFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVALAMVAWQGVRLLPVGVTTAHT
Ga0182038_101650791	3300016445	Soil	VRDDWIIYAIFGVLVCLLPWRVATQWKVKSAEAENLRASLIILGVVAL
Ga0182038_101959574	3300016445	Soil	MSDSWIIYAIFGVLVCLLLWRAATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLL
Ga0182038_102448453	3300016445	Soil	MRDGWIIYAIFGVLVCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLL
Ga0182038_104898691	3300016445	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGV
Ga0187776_109919701	3300017966	Tropical Peatland	MRDSWIIYAIFGVLVCLLLWRVATQWKVRSAEAENLRASLIIVGVVELAFVVWQCVQH
Ga0187777_101677073	3300017974	Tropical Peatland	VTWIIYAIFGVVVCLLLRRVATQWKVKSAEAENLRVSVVILGFVAFVFVLVQ
Ga0187822_100331342	3300017994	Freshwater Sediment	MTVADSWIIYAVFGVLVCLLLWRIATQWKIKSAEAENLRASLIIWGVIAAAIVAWYFIK
Ga0187765_101321251	3300018060	Tropical Peatland	MHDDLIIYAAFGVLVCLLLWRVATERNSAEAGNRRASLLILGVVALVMVVWQGVRLLPV
Ga0187765_104821061	3300018060	Tropical Peatland	MTDDLIIYAAFGVLVCLLLWRVATERNSAEAGNRRASLLILGVVALVMVVWQGVRLLPV
Ga0187768_10819122	3300020150	Tropical Peatland	MAVTWIIYAIFGVLVCLLLRWVATQWKDKSAEAENLRISVVIL
Ga0126371_112828551	3300021560	Tropical Forest Soil	MRDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGI
Ga0126371_126189351	3300021560	Tropical Forest Soil	MRDGWIIYAIFGVLVCLLLWRVATQWKSAEAHNLRASLTILGVVALAF
Ga0209040_100279701	3300027824	Bog Forest Soil	MRDGWIIYAIFGVLVCLLLWRVATQWKVKNAEAENLRASLIILGVVALVLVVWQCVRQ
Ga0170820_111077951	3300031446	Forest Soil	MRDGWIIFVIFGVLGCLLLWRVATQWKVKSTEAENLRVSVVISGVVALVLVVLQ
Ga0318541_105624182	3300031545	Soil	MPENWIIYAAIGVLVCLLLWRVATQWKVKSVEAENLRVSVVVFGVVA
Ga0318541_106879171	3300031545	Soil	MGDGWIIYAAFGVLVCLILWRAATQWVNGAEARNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTEDKT
Ga0310915_105877493	3300031573	Soil	MRDGWLIYAAFGVLVCLLLWRVATQWNGSSAEAGNLRASLTILGVV
Ga0310915_108520553	3300031573	Soil	MHDGWIIYAAFGVLVCLLLWRIATQWRNAEAANLRISLTILGIVA
Ga0310915_108899342	3300031573	Soil	MAVRDSWIIYAIFGVLVCLLLWRVATQWKIKSAEAENLRASLIILGVV
Ga0318542_101987862	3300031668	Soil	VPHDWIIYAAFGVLVCLLLWRAATQRNVNSAEAGNRRASLIILGVV
Ga0318561_103313801	3300031679	Soil	VIDSWVIYAIFGVLLLLLLWRVATQWRVKSAEAADRRASVMILGIVIAALVAWYLLGLR
Ga0318560_101621301	3300031682	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNVTGAEAGNRRASLIILAVVAIAMVVW
Ga0318496_106809053	3300031713	Soil	MTDGWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVALVMVAWQGVRLLPVGATSTHT
Ga0306917_115241782	3300031719	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNRRASLIIL
Ga0306918_104132674	3300031744	Soil	MRDSWIIYAVFGVLLCLLLWRVATEWNVNSAEAGNRRASLIILGVVALAMVAWQGVRL
Ga0306918_109820962	3300031744	Soil	MRDGWLIYAAFGVLVCLLLWRVATQWNGSSAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTED
Ga0306918_110075432	3300031744	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVVLAMVVW
Ga0306918_112081541	3300031744	Soil	MPVHDDWIIYAAFGVLVCLLLWRIATQWRNAEAANLRISLTILGIVALAMVVWQGVRLLPVGAT
Ga0318502_105521481	3300031747	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTI
Ga0318537_103291321	3300031763	Soil	MRDSWIIYAIFGVLVCLLLWRVATQWKVKGAEAENLRTSLIILGAVGLVMVVWQ
Ga0318509_103434902	3300031768	Soil	MTDGWIIYAAFGVLVCLLLWRVATQWRNVEAGNLRISLTILGIVALVMVVWQGARLF
Ga0318521_103860811	3300031770	Soil	MTDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGIVALVMVVWQGARLFGVGATTAQDK
Ga0318557_104575641	3300031795	Soil	MVTMRDSWIIYAIFGVLVCLLLWRTATQWNVNGAEAGNLRASLTI
Ga0318550_104925652	3300031797	Soil	MPDGWIIYAIFGVLVCLLLWRVATQRNVNSAEAGNLRASLIILGVVALVMVV
Ga0318568_109324891	3300031819	Soil	MPDGWIIYAIFGVLVCLLLWRVATQRNVNSAEAGNLRASLIILGVVALVM
Ga0310917_100733181	3300031833	Soil	MGDGWIIYAAFGVLVCLILWRAATQWVNGAEARNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTE
Ga0310917_101222351	3300031833	Soil	MREGWIIYAAFGVLVCLLLWRVATQWNVSSAEAGNLRASHTILGVVALA
Ga0310917_107829151	3300031833	Soil	VPHDWIIYAAFGVLVCLLLWRAATQWNVNGAEAGNRRASLVILGVVALVMVGWQCARLL
Ga0306919_101800101	3300031879	Soil	MRDGWIIYAAFGVLLCLLLWRTATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLAVGATTE
Ga0306919_102250833	3300031879	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTED
Ga0306919_102640844	3300031879	Soil	VHDDWIIYAAFGVLVCLLLWRIATQWRNAEAANLRISLTILG
Ga0306919_102868621	3300031879	Soil	MRDSWIIYAAFGVLVCLLLWRVATQRNAGNLRASLIILGVAALVLVGWQ
Ga0306919_104360791	3300031879	Soil	VAVPHDWIIYAAFGVLVCLLLWRAATQRNVNSAEAGNRRASLIILGVVALAMAAWQGVRL
Ga0306919_111351022	3300031879	Soil	MRDSWIIYAAFGVLVCLLLWWVATQRNVNSAEAGNRRASLIVLSVVALVMVV
Ga0306919_112675302	3300031879	Soil	VRDGWIIYAIFGVLVCLLLRRVATQWKVRSAEAQNLRISVVVLGFVGLVFGVVQGAR
Ga0306925_101460353	3300031890	Soil	MRDSWIIYAAFGVLVCLLLWWVATQRNVNSAEAGNRRASL
Ga0306925_103430561	3300031890	Soil	VRDGWVIYAIFGVLVCLLLWRIATQWRNAEAANLRISLTILGIVALVMVV
Ga0306925_103493444	3300031890	Soil	MSDSWIIYAIFGVLVCLLLWRAATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGATTAHTEDK
Ga0306925_110601761	3300031890	Soil	MAVTWIIYGIFGVLVCLLLRRVATQWKVKSAEAENLRVSVVILGFVALVFVFVQGVRLALPIAA
Ga0318522_101971421	3300031894	Soil	MPDGWIIYAIFGVLVCLLLWRVATQRNVNSAEAGNRRASLIVLSVVALVMVVWQGARLLGVG
Ga0318520_103455473	3300031897	Soil	MTDGWIIYAAFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVVALVMVAWQGVRLL
Ga0306923_100759111	3300031910	Soil	MSDSWIIYAIFGVLVCLLLWRAATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVG
Ga0306921_104266151	3300031912	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFV
Ga0306921_104397463	3300031912	Soil	SWVIYAIFGVLLLLLLWRVATQWRVKSAEAADRRASVMILGIVIAALVAWYLLGLR
Ga0306921_105205614	3300031912	Soil	MSDSWIIYAIFGVLVCLLLWRAATQWNVNGAEAGNLRASLTILGVVALAFVVWQ
Ga0306921_119329881	3300031912	Soil	VRDGWIIYAIFGVLVCLLLWRIATQWKVKSAEAENLRASLIILGVVALAFV
Ga0306921_121317662	3300031912	Soil	MRDSWIIYAIFGVLVCLLLWRVATQWKVKGAEAENLRTSLIILGAVGLVMVVWQGVRLLAVGATT
Ga0306921_121662281	3300031912	Soil	MRDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGIV
Ga0306921_122793953	3300031912	Soil	MRDGWIIYAAFGVLVCLLLWRVATHWKVKSVEAENLRASLIILGVVALVLVVYQSVRLLAVGATTA
Ga0310912_101369451	3300031941	Soil	VRDGWVIYAIFGVLVCLLLWRVATQWKVKSAEAENLRASLIILGVVALAFVVWQFVQQAS
Ga0310912_105761972	3300031941	Soil	MRDSWIIYAAFGVLVCLLLWRVATQRNAGNLRASLIILGVAALVLVG
Ga0310912_107833733	3300031941	Soil	VADSWIIYAIFGVLVCLLLWRVATQWKVKSADAENLRVSLIILGVVALAFVVWQGARLLA
Ga0310916_109722502	3300031942	Soil	MVAMRDGWIIYAVFGVLVCLVLWRVATQRNAGNLRSSLIILGIAALVMVVWQGVRLLGVG
Ga0310913_101241793	3300031945	Soil	MRDGWIIYAAFGVLLCLLLWRTATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGA
Ga0310913_106054432	3300031945	Soil	VPHDWIIYAIIGVLVCLLLWRAATQWKVKSAEAENLRTSLIILGVIAL
Ga0310913_109623201	3300031945	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGVVALAFVVWQGVRLLGVGA
Ga0306926_115092551	3300031954	Soil	MRDGWIIYAAFGVLVCLLLWRVATQWNVSSAEAGNLRVSLTILG
Ga0306926_115283162	3300031954	Soil	MRDGWIIYAIFGVLVGLLLWRVATQWKVKSAEAENLRASLIILGVVALAFVVWQSVRLPDVGATTAHT
Ga0306926_115946152	3300031954	Soil	VRDGWIIYAIFGVLVCLLLWRVATQWKVKTAEAENLRASLIILGVVALAFVVW
Ga0307479_102162122	3300031962	Hardwood Forest Soil	MAVRDGWIIYAAFGVFVCLLLWRTATQWKVKSAEADNLRVLVAIFGVVALVFVVWQGVR
Ga0318545_101347742	3300032042	Soil	MRDSWIIYAIFGVLVCLLLWRVATQWNVNSAEAGNRRALQTGGPR
Ga0318558_102109243	3300032044	Soil	MRDDWIIYAAFGVLVCLLLWRAATQRNVNSAEARNSLIILGVVALALVGWQGARLLPHAEDKTI
Ga0318532_101949871	3300032051	Soil	MTDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGIVALVMVVWQGARLFGVGATTAQD
Ga0318575_105531421	3300032055	Soil	MVAMRDSWIIYATFGVLVCLLLLRVATQRNAGNLRASLIIFG
Ga0318533_104186041	3300032059	Soil	MAMRDGWIIYAVFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVIA
Ga0318504_103244553	3300032063	Soil	MRDSWIIYAAFGVLVCLLLWRVATQWRTAEAGNLRISLTILGIVALVM
Ga0318514_103701033	3300032066	Soil	MPDGWIIYAIFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVIALVIVGWQCVRLLTVGAT
Ga0306924_101974213	3300032076	Soil	MRDSWIIYAAFGVLVCLLLWWVATQRNVNSAEAGNRRASLIVLS
Ga0306924_102374944	3300032076	Soil	MRDGWIIYAAFGVLLCLLLWRVATQWNVNGAEAGNLRASLTILGVV
Ga0306924_104667171	3300032076	Soil	MRDGWVIYAAFGVLVCLLLWRVATRRNNLRASLITLGVVALVMAVWLSVRLLAVGATTAY
Ga0306924_118785511	3300032076	Soil	MAMRDGWIIYAVFGVLVCLLLWRVATQRNVNSAEAGNRRASLIILGVIALVIVGWQCVR
Ga0306924_121927951	3300032076	Soil	MTDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGIVALVMVVWQGARLLPNAATTA
Ga0306920_1007601234	3300032261	Soil	MHDGWIIYAAFGILVCLLLWRVATQWKVKSAQAENLRASLIILGVVALAF
Ga0306920_1008699262	3300032261	Soil	VHDGWIIYAAFGVLVCLLLWRVATQWRNAEAGNLRISLTILGIVALVMVVWQGARLLPNA
Ga0306920_1009030512	3300032261	Soil	MRDGWIIYAIFGVLVCLLLWRAATQWRVKSAEAENLRASLIILGVIALVI
Ga0306920_1027475051	3300032261	Soil	MVTMRDSWIIYAIFGVLVCLLLWRVATQRNTGNLRASLIILGVVALVMV
Ga0306920_1037691261	3300032261	Soil	MRDGWIIYAAFGVLVCLLLWRVATQRNDLRASLIILGVVALVMVVWQG
Ga0310914_115822642	3300033289	Soil	VRDGWIIYAIFGVLLCLLLWRVATQWKVKSAEAQNLRASLIVLGVVALAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F044851

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences